Ras-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g20110 FvH4_4g20150 FvH4_4g20151 FvH4_4g20160 FvH4_4g20410 |
| rosa_chinensis | RchiOBHm_Chr4g0425881 RchiOBHm_Chr7g0220551 |
| rosa_laevigata | RLG00000002218 RLG00000007333 |
| rosa_multiflora | Rmu_ssc0000189.1_g000033 Rmu_ssc0000189.1_g000034 Rmu_ssc0000281.1_g000028 Rmu_ssc0000281.1_g000029 Rmu_ssc0000281.1_g000030 Rmu_ssc0000281.1_g000031 Rmu_ssc0000281.1_g000032 |
| rosa_roxburghii | Rroxscaffold_5G00367920 |
| rosa_samantha | Rh4BG270100 Rh4DG266500 Rh7AG335700 Rh7AG335800 Rh7CG353400 Rh7CG353500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 151 |
| AfaI | GTAC | 1 cut(s) | 111 |
| AgsI | TTSAA | 2 cut(s) | 80, 163 |
| AoxI | GGCC | 3 cut(s) | 6, 151, 155 |
| ApeKI | GCWGC | 1 cut(s) | 56 |
| BbvI | GCAGC | 1 cut(s) | 43 |
| BccI | CCATC | 1 cut(s) | 77 |
| BfaI | CTAG | 1 cut(s) | 190 |
| BisI | GCNGC | 1 cut(s) | 57 |
| BlsI | GCNGC | 1 cut(s) | 58 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BpmI | CTGGAG | 1 cut(s) | 116 |
| Bse118I | RCCGGY | 1 cut(s) | 153 |
| Bse1I | ACTGG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 38 |
| BseNI | ACTGG | 1 cut(s) | 185 |
| BseRI | GAGGAG | 1 cut(s) | 50 |
| BseXI | GCAGC | 1 cut(s) | 43 |
| BshFI | GGCC | 3 cut(s) | 8, 153, 157 |
| BsiSI | CCGG | 1 cut(s) | 154 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| BsnI | GGCC | 3 cut(s) | 8, 153, 157 |
| BspANI | GGCC | 3 cut(s) | 8, 153, 157 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BsrFI | RCCGGY | 1 cut(s) | 153 |
| BsrI | ACTGG | 1 cut(s) | 185 |
| BssAI | RCCGGY | 1 cut(s) | 153 |
| BstC8I | GCNNGC | 1 cut(s) | 155 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 121 |
| BstV1I | GCAGC | 1 cut(s) | 43 |
| BsuRI | GGCC | 3 cut(s) | 8, 153, 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 1 cut(s) | 155 |
| Cfr10I | RCCGGY | 1 cut(s) | 153 |
| Csp6I | GTAC | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 4 cut(s) | 8, 153, 157, 185 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 153, 157, 185 |
| CviQI | GTAC | 1 cut(s) | 110 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| EaeI | YGGCCR | 1 cut(s) | 151 |
| Eco147I | AGGCCT | 1 cut(s) | 8 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 4 cut(s) | 47, 65, 67, 138 |
| FatI | CATG | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 1 cut(s) | 57 |
| FseI | GGCCGGCC | 1 cut(s) | 157 |
| Fsp4HI | GCNGC | 1 cut(s) | 57 |
| FspBI | CTAG | 1 cut(s) | 190 |
| GluI | GCNGC | 1 cut(s) | 57 |
| GsuI | CTGGAG | 1 cut(s) | 116 |
| HaeIII | GGCC | 3 cut(s) | 8, 153, 157 |
| HapII | CCGG | 1 cut(s) | 154 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HinfI | GANTC | 1 cut(s) | 76 |
| HpaII | CCGG | 1 cut(s) | 154 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 2 cut(s) | 59, 175 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 121 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| KroI | GCCGGC | 1 cut(s) | 153 |
| KroNI | GCCGGC | 1 cut(s) | 155 |
| LpnPI | CCDG | 3 cut(s) | 146, 166, 167 |
| Lsp1109I | GCAGC | 1 cut(s) | 43 |
| MaeI | CTAG | 1 cut(s) | 190 |
| MboII | GAAGA | 1 cut(s) | 85 |
| MluCI | AATT | 1 cut(s) | 117 |
| MnlI | CCTC | 4 cut(s) | 19, 28, 31, 100 |
| MroNI | GCCGGC | 1 cut(s) | 153 |
| MseI | TTAA | 1 cut(s) | 101 |
| MspI | CCGG | 1 cut(s) | 154 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 121 |
| NaeI | GCCGGC | 1 cut(s) | 155 |
| NgoMIV | GCCGGC | 1 cut(s) | 153 |
| NlaIII | CATG | 1 cut(s) | 140 |
| PceI | AGGCCT | 1 cut(s) | 8 |
| PctI | GAATGC | 1 cut(s) | 41 |
| PdiI | GCCGGC | 1 cut(s) | 155 |
| PfeI | GAWTC | 1 cut(s) | 76 |
| PkrI | GCNGC | 1 cut(s) | 58 |
| RigI | GGCCGGCC | 1 cut(s) | 157 |
| RsaI | GTAC | 1 cut(s) | 111 |
| RsaNI | GTAC | 1 cut(s) | 110 |
| SaqAI | TTAA | 1 cut(s) | 101 |
| SatI | GCNGC | 1 cut(s) | 57 |
| SetI | ASST | 1 cut(s) | 111 |
| SgeI | CNNG | 7 cut(s) | 82, 92, 145, 149, 161, 166, 179 |
| Sse9I | AATT | 1 cut(s) | 117 |
| SseBI | AGGCCT | 1 cut(s) | 8 |
| SspMI | CTAG | 1 cut(s) | 190 |
| StuI | AGGCCT | 1 cut(s) | 8 |
| TasI | AATT | 1 cut(s) | 117 |
| TfiI | GAWTC | 1 cut(s) | 76 |
| Tru1I | TTAA | 1 cut(s) | 101 |
| Tru9I | TTAA | 1 cut(s) | 101 |
| TscAI | CASTG | 1 cut(s) | 185 |
| TseI | GCWGC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 1 cut(s) | 34 |
| TspRI | CASTG | 1 cut(s) | 185 |
| XspI | CTAG | 1 cut(s) | 190 |