Auxin responsive protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16510 AT1G56150 AT1G79130 AT3G12830 |
| fragaria_vesca | FvH4_3g15390 |
| malus_domestica | MD05G1223400.v1.1 MD10G1204800.v1.1 |
| prunus_persica | Prupe.4G136800_v2.0.a1 |
| pyrus_communis | pycom05g20630 |
| rosa_chinensis | RchiOBHm_Chr1g0324921 RchiOBHm_Chr5g0025871 |
| rosa_laevigata | RLG00000017123 |
| rosa_multiflora | Rmu_sc0000968.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00073720 Rroxscaffold_7G00170940 Rroxscaffold_7G00180320 |
| rosa_rugosa | Rorug01G0048500 Rorug05G0089100 Rorug06G0194900 |
| rosa_samantha | Rh2BG576100 |
| rosa_wichuraiana | Rw5G016430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 22 |
| AciI | CCGC | 2 cut(s) | 74, 113 |
| AclWI | GGATC | 1 cut(s) | 7 |
| AcvI | CACGTG | 1 cut(s) | 71 |
| AcyI | GRCGYC | 2 cut(s) | 19, 33 |
| AdeI | CACNNNGTG | 1 cut(s) | 135 |
| AflIII | ACRYGT | 1 cut(s) | 68 |
| AjiI | CACGTC | 1 cut(s) | 166 |
| AjnI | CCWGG | 1 cut(s) | 485 |
| AleI | CACNNNNGTG | 1 cut(s) | 297 |
| AluBI | AGCT | 3 cut(s) | 120, 178, 496 |
| AluI | AGCT | 3 cut(s) | 120, 178, 496 |
| Alw21I | GWGCWC | 3 cut(s) | 122, 165, 271 |
| Alw26I | GTCTC | 2 cut(s) | 43, 440 |
| AlwI | GGATC | 1 cut(s) | 7 |
| Ama87I | CYCGRG | 1 cut(s) | 170 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 326 |
| AsuC2I | CCSGG | 1 cut(s) | 133 |
| AvaI | CYCGRG | 1 cut(s) | 170 |
| AxyI | CCTNAGG | 1 cut(s) | 390 |
| BanII | GRGCYC | 2 cut(s) | 122, 149 |
| BbrPI | CACGTG | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 348 |
| Bbv12I | GWGCWC | 3 cut(s) | 122, 165, 271 |
| BccI | CCATC | 1 cut(s) | 88 |
| BceAI | ACGGC | 2 cut(s) | 20, 184 |
| BciT130I | CCWGG | 1 cut(s) | 487 |
| BcnI | CCSGG | 1 cut(s) | 133 |
| BcoDI | GTCTC | 2 cut(s) | 43, 440 |
| Bme1390I | CCNGG | 2 cut(s) | 133, 487 |
| BmeT110I | CYCGRG | 1 cut(s) | 170 |
| BmgBI | CACGTC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 2 cut(s) | 133, 487 |
| BmsI | GCATC | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 348 |
| BpmI | CTGGAG | 1 cut(s) | 422 |
| BpuMI | CCSGG | 1 cut(s) | 133 |
| BsaAI | YACGTR | 1 cut(s) | 71 |
| BsaHI | GRCGYC | 2 cut(s) | 19, 33 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 452, 482 |
| Bse21I | CCTNAGG | 1 cut(s) | 390 |
| BseBI | CCWGG | 1 cut(s) | 487 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseMII | CTCAG | 2 cut(s) | 310, 404 |
| BseRI | GAGGAG | 2 cut(s) | 112, 212 |
| BsiHKAI | GWGCWC | 3 cut(s) | 122, 165, 271 |
| BsiHKCI | CYCGRG | 1 cut(s) | 170 |
| BsiSI | CCGG | 3 cut(s) | 27, 133, 181 |
| BsmAI | GTCTC | 2 cut(s) | 43, 440 |
| BsmBI | CGTCTC | 1 cut(s) | 43 |
| BsoBI | CYCGRG | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 4 cut(s) | 122, 149, 165, 271 |
| Bsp143I | GATC | 2 cut(s) | 12, 241 |
| BspACI | CCGC | 2 cut(s) | 74, 113 |
| BspCNI | CTCAG | 2 cut(s) | 309, 403 |
| BspPI | GGATC | 1 cut(s) | 7 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssMI | GATC | 2 cut(s) | 12, 241 |
| BssNI | GRCGYC | 2 cut(s) | 19, 33 |
| Bst2UI | CCWGG | 1 cut(s) | 487 |
| Bst4CI | ACNGT | 1 cut(s) | 283 |
| BstACI | GRCGYC | 2 cut(s) | 19, 33 |
| BstBAI | YACGTR | 1 cut(s) | 71 |
| BstC8I | GCNNGC | 2 cut(s) | 161, 341 |
| BstDEI | CTNAG | 3 cut(s) | 296, 384, 390 |
| BstKTI | GATC | 2 cut(s) | 15, 244 |
| BstMAI | GTCTC | 2 cut(s) | 43, 440 |
| BstMBI | GATC | 2 cut(s) | 12, 241 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstNI | CCWGG | 1 cut(s) | 487 |
| BstSCI | CCNGG | 2 cut(s) | 131, 485 |
| BstV2I | GAAGAC | 1 cut(s) | 348 |
| Bsu36I | CCTNAGG | 1 cut(s) | 390 |
| BtrI | CACGTC | 1 cut(s) | 166 |
| BtsIMutI | CAGTG | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 2 cut(s) | 161, 341 |
| CseI | GACGC | 2 cut(s) | 41, 198 |
| CviJI | RGCY | 9 cut(s) | 7, 120, 147, 178, 184, 228, 388, 395, 496 |
| CviKI_1 | RGCY | 9 cut(s) | 7, 120, 147, 178, 184, 228, 388, 395, 496 |
| DdeI | CTNAG | 3 cut(s) | 296, 384, 390 |
| DpnI | GATC | 2 cut(s) | 14, 243 |
| DpnII | GATC | 2 cut(s) | 12, 241 |
| DraI | TTTAAA | 1 cut(s) | 276 |
| DraIII | CACNNNGTG | 1 cut(s) | 135 |
| EciI | GGCGGA | 1 cut(s) | 102 |
| Ecl136II | GAGCTC | 1 cut(s) | 120 |
| Eco24I | GRGCYC | 2 cut(s) | 122, 149 |
| Eco53kI | GAGCTC | 1 cut(s) | 120 |
| Eco72I | CACGTG | 1 cut(s) | 71 |
| Eco81I | CCTNAGG | 1 cut(s) | 390 |
| Eco88I | CYCGRG | 1 cut(s) | 170 |
| EcoICRI | GAGCTC | 1 cut(s) | 120 |
| EcoRII | CCWGG | 1 cut(s) | 485 |
| EcoT38I | GRGCYC | 2 cut(s) | 122, 149 |
| Esp3I | CGTCTC | 1 cut(s) | 43 |
| FaiI | YATR | 5 cut(s) | 81, 413, 418, 424, 429 |
| FriOI | GRGCYC | 2 cut(s) | 122, 149 |
| GsuI | CTGGAG | 1 cut(s) | 422 |
| HapII | CCGG | 3 cut(s) | 27, 133, 181 |
| HgaI | GACGC | 2 cut(s) | 41, 198 |
| Hin1I | GRCGYC | 2 cut(s) | 19, 33 |
| HinfI | GANTC | 2 cut(s) | 374, 433 |
| HpaII | CCGG | 3 cut(s) | 27, 133, 181 |
| Hpy188I | TCNGA | 6 cut(s) | 17, 48, 62, 188, 321, 351 |
| Hpy188III | TCNNGA | 2 cut(s) | 172, 439 |
| Hpy99I | CGWCG | 4 cut(s) | 21, 35, 92, 145 |
| HpyAV | CCTTC | 2 cut(s) | 316, 436 |
| HpyCH4III | ACNGT | 1 cut(s) | 283 |
| HpyCH4IV | ACGT | 3 cut(s) | 19, 70, 165 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 3 cut(s) | 296, 384, 390 |
| HpySE526I | ACGT | 3 cut(s) | 19, 70, 165 |
| Hsp92I | GRCGYC | 2 cut(s) | 19, 33 |
| Kzo9I | GATC | 2 cut(s) | 12, 241 |
| LmnI | GCTCC | 2 cut(s) | 125, 183 |
| LpnPI | CCDG | 6 cut(s) | 40, 146, 194, 377, 452, 472 |
| LweI | GCATC | 1 cut(s) | 201 |
| MaeII | ACGT | 3 cut(s) | 19, 70, 165 |
| MaeIII | GTNAC | 4 cut(s) | 37, 206, 245, 283 |
| MalI | GATC | 2 cut(s) | 14, 243 |
| MboI | GATC | 2 cut(s) | 12, 241 |
| MboII | GAAGA | 1 cut(s) | 348 |
| MhlI | GDGCHC | 4 cut(s) | 122, 149, 165, 271 |
| MluCI | AATT | 1 cut(s) | 453 |
| MlyI | GAGTC | 1 cut(s) | 442 |
| MmeI | TCCRAC | 1 cut(s) | 40 |
| MnlI | CCTC | 8 cut(s) | 56, 133, 179, 230, 233, 305, 399, 465 |
| MroXI | GAANNNNTTC | 1 cut(s) | 326 |
| MseI | TTAA | 2 cut(s) | 152, 275 |
| MslI | CAYNNNNRTG | 1 cut(s) | 297 |
| MspI | CCGG | 3 cut(s) | 27, 133, 181 |
| MspR9I | CCNGG | 2 cut(s) | 133, 487 |
| MvaI | CCWGG | 1 cut(s) | 487 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NciI | CCSGG | 1 cut(s) | 133 |
| NdeII | GATC | 2 cut(s) | 12, 241 |
| NmeAIII | GCCGAG | 2 cut(s) | 141, 204 |
| NmuCI | GTSAC | 2 cut(s) | 206, 245 |
| OliI | CACNNNNGTG | 1 cut(s) | 297 |
| PaeR7I | CTCGAG | 1 cut(s) | 170 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 326 |
| PfeI | GAWTC | 1 cut(s) | 374 |
| PleI | GAGTC | 1 cut(s) | 441 |
| PmaCI | CACGTG | 1 cut(s) | 71 |
| PmlI | CACGTG | 1 cut(s) | 71 |
| PpsI | GAGTC | 1 cut(s) | 441 |
| Ppu21I | YACGTR | 1 cut(s) | 71 |
| Psp124BI | GAGCTC | 1 cut(s) | 122 |
| Psp6I | CCWGG | 1 cut(s) | 485 |
| PspCI | CACGTG | 1 cut(s) | 71 |
| PspGI | CCWGG | 1 cut(s) | 485 |
| RseI | CAYNNNNRTG | 1 cut(s) | 297 |
| SacI | GAGCTC | 1 cut(s) | 122 |
| SaqAI | TTAA | 2 cut(s) | 152, 275 |
| Sau3AI | GATC | 2 cut(s) | 12, 241 |
| SchI | GAGTC | 1 cut(s) | 442 |
| ScrFI | CCNGG | 2 cut(s) | 133, 487 |
| SduI | GDGCHC | 4 cut(s) | 122, 149, 165, 271 |
| SetI | ASST | 9 cut(s) | 22, 73, 122, 168, 180, 222, 297, 476, 498 |
| SfaNI | GCATC | 1 cut(s) | 201 |
| Sfr274I | CTCGAG | 1 cut(s) | 170 |
| SlaI | CTCGAG | 1 cut(s) | 170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 297 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| Sse9I | AATT | 1 cut(s) | 453 |
| SsiI | CCGC | 2 cut(s) | 74, 113 |
| SstI | GAGCTC | 1 cut(s) | 122 |
| StyD4I | CCNGG | 2 cut(s) | 131, 485 |
| TaaI | ACNGT | 1 cut(s) | 283 |
| TaiI | ACGT | 3 cut(s) | 22, 73, 168 |
| TaqI | TCGA | 2 cut(s) | 143, 171 |
| TasI | AATT | 1 cut(s) | 453 |
| TfiI | GAWTC | 1 cut(s) | 374 |
| Tru1I | TTAA | 2 cut(s) | 152, 275 |
| Tru9I | TTAA | 2 cut(s) | 152, 275 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TseFI | GTSAC | 2 cut(s) | 206, 245 |
| Tsp45I | GTSAC | 2 cut(s) | 206, 245 |
| TspDTI | ATGAA | 3 cut(s) | 17, 241, 411 |
| TspGWI | ACGGA | 1 cut(s) | 473 |
| TspRI | CASTG | 1 cut(s) | 304 |
| XhoI | CTCGAG | 1 cut(s) | 170 |
| XmnI | GAANNNNTTC | 1 cut(s) | 326 |
| ZraI | GACGTC | 1 cut(s) | 20 |