F-box LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g13800 |
| rosa_chinensis | RchiOBHm_Chr1g0331921 RchiOBHm_Chr1g0353851 RchiOBHm_Chr1g0353901 RchiOBHm_Chr1g0353931 |
| rosa_laevigata | RLG00000028245 RLG00000028249 |
| rosa_multiflora | Rmu_sc0000523.1_g000002 Rmu_sc0005552.1_g000002 Rmu_sc0005552.1_g000005 Rmu_sc0007658.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00301450 Rroxscaffold_4G00301480 Rroxscaffold_4G00301530 |
| rosa_rugosa | Rorug01G0239300 |
| rosa_samantha | Rh1BG222400 Rh1CG233600 Rh1DG248600 Rh1DG249200 |
| rosa_wichuraiana | Rw1G021880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 177 |
| AcoI | YGGCCR | 1 cut(s) | 207 |
| AcuI | CTGAAG | 1 cut(s) | 181 |
| AflIII | ACRYGT | 1 cut(s) | 471 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AhlI | ACTAGT | 1 cut(s) | 299 |
| AluBI | AGCT | 2 cut(s) | 120, 403 |
| AluI | AGCT | 2 cut(s) | 120, 403 |
| Alw26I | GTCTC | 1 cut(s) | 358 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 349 |
| AoxI | GGCC | 1 cut(s) | 207 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 8, 40 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 275 |
| AspA2I | CCTAGG | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 364 |
| AvrII | CCTAGG | 1 cut(s) | 49 |
| BbsI | GAAGAC | 1 cut(s) | 458 |
| BccI | CCATC | 2 cut(s) | 220, 456 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BcoDI | GTCTC | 1 cut(s) | 358 |
| BcuI | ACTAGT | 1 cut(s) | 299 |
| BfaI | CTAG | 4 cut(s) | 50, 242, 300, 338 |
| BfmI | CTRYAG | 1 cut(s) | 321 |
| BlnI | CCTAGG | 1 cut(s) | 49 |
| BmsI | GCATC | 3 cut(s) | 188, 235, 378 |
| BpiI | GAAGAC | 1 cut(s) | 458 |
| BpuEI | CTTGAG | 3 cut(s) | 358, 392, 461 |
| BsaJI | CCNNGG | 2 cut(s) | 49, 210 |
| Bse1I | ACTGG | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 153 |
| BseDI | CCNNGG | 2 cut(s) | 49, 210 |
| BseMI | GCAATG | 1 cut(s) | 153 |
| BseMII | CTCAG | 1 cut(s) | 479 |
| BseNI | ACTGG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 1 cut(s) | 458 |
| BshFI | GGCC | 1 cut(s) | 209 |
| BslFI | GGGAC | 1 cut(s) | 159 |
| BsmAI | GTCTC | 1 cut(s) | 358 |
| BsmBI | CGTCTC | 1 cut(s) | 358 |
| BsmFI | GGGAC | 1 cut(s) | 159 |
| BsnI | GGCC | 1 cut(s) | 209 |
| Bsp143I | GATC | 3 cut(s) | 40, 328, 491 |
| BspACI | CCGC | 1 cut(s) | 177 |
| BspANI | GGCC | 1 cut(s) | 209 |
| BspCNI | CTCAG | 1 cut(s) | 480 |
| BsrDI | GCAATG | 1 cut(s) | 153 |
| BsrI | ACTGG | 1 cut(s) | 222 |
| BssECI | CCNNGG | 2 cut(s) | 49, 210 |
| BssMI | GATC | 3 cut(s) | 40, 328, 491 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| BstDEI | CTNAG | 1 cut(s) | 488 |
| BstKTI | GATC | 3 cut(s) | 43, 331, 494 |
| BstMAI | GTCTC | 1 cut(s) | 358 |
| BstMBI | GATC | 3 cut(s) | 40, 328, 491 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstNSI | RCATGY | 1 cut(s) | 475 |
| BstSFI | CTRYAG | 1 cut(s) | 321 |
| BstV2I | GAAGAC | 1 cut(s) | 458 |
| BsuRI | GGCC | 1 cut(s) | 209 |
| BtsIMutI | CAGTG | 1 cut(s) | 215 |
| CaiI | CAGNNNCTG | 1 cut(s) | 349 |
| CseI | GACGC | 1 cut(s) | 375 |
| CviAII | CATG | 3 cut(s) | 59, 183, 472 |
| CviJI | RGCY | 8 cut(s) | 7, 120, 209, 221, 239, 320, 349, 403 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 120, 209, 221, 239, 320, 349, 403 |
| DdeI | CTNAG | 1 cut(s) | 488 |
| DpnI | GATC | 3 cut(s) | 42, 330, 493 |
| DpnII | GATC | 3 cut(s) | 40, 328, 491 |
| EaeI | YGGCCR | 1 cut(s) | 207 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| Esp3I | CGTCTC | 1 cut(s) | 358 |
| FaeI | CATG | 3 cut(s) | 62, 186, 475 |
| FaiI | YATR | 8 cut(s) | 60, 78, 161, 184, 192, 224, 429, 473 |
| FaqI | GGGAC | 1 cut(s) | 159 |
| FatI | CATG | 3 cut(s) | 58, 182, 471 |
| FauI | CCCGC | 1 cut(s) | 184 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| FspBI | CTAG | 4 cut(s) | 50, 242, 300, 338 |
| HaeIII | GGCC | 1 cut(s) | 209 |
| HgaI | GACGC | 1 cut(s) | 375 |
| Hin1II | CATG | 3 cut(s) | 62, 186, 475 |
| HinfI | GANTC | 3 cut(s) | 149, 172, 436 |
| HphI | GGTGA | 2 cut(s) | 76, 364 |
| Hpy188I | TCNGA | 2 cut(s) | 345, 489 |
| Hpy188III | TCNNGA | 4 cut(s) | 242, 292, 375, 440 |
| HpyAV | CCTTC | 1 cut(s) | 354 |
| HpyCH4V | TGCA | 4 cut(s) | 140, 163, 335, 507 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 1 cut(s) | 488 |
| Hsp92II | CATG | 3 cut(s) | 62, 186, 475 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 40, 328, 491 |
| LpnPI | CCDG | 3 cut(s) | 85, 203, 335 |
| LweI | GCATC | 3 cut(s) | 188, 235, 378 |
| MaeI | CTAG | 4 cut(s) | 50, 242, 300, 338 |
| MaeIII | GTNAC | 1 cut(s) | 302 |
| MalI | GATC | 3 cut(s) | 42, 330, 493 |
| MboI | GATC | 3 cut(s) | 40, 328, 491 |
| MboII | GAAGA | 2 cut(s) | 397, 463 |
| MlyI | GAGTC | 2 cut(s) | 143, 181 |
| MnlI | CCTC | 7 cut(s) | 91, 205, 229, 261, 304, 339, 436 |
| MroXI | GAANNNNTTC | 1 cut(s) | 275 |
| MseI | TTAA | 2 cut(s) | 144, 482 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeII | GATC | 3 cut(s) | 40, 328, 491 |
| NlaIII | CATG | 3 cut(s) | 62, 186, 475 |
| NmeAIII | GCCGAG | 1 cut(s) | 235 |
| NmuCI | GTSAC | 1 cut(s) | 302 |
| NspI | RCATGY | 1 cut(s) | 475 |
| PciI | ACATGT | 1 cut(s) | 471 |
| PdmI | GAANNNNTTC | 1 cut(s) | 275 |
| PfeI | GAWTC | 1 cut(s) | 436 |
| PleI | GAGTC | 2 cut(s) | 143, 180 |
| PpsI | GAGTC | 2 cut(s) | 143, 180 |
| PscI | ACATGT | 1 cut(s) | 471 |
| PstNI | CAGNNNCTG | 1 cut(s) | 349 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SaqAI | TTAA | 2 cut(s) | 144, 482 |
| Sau3AI | GATC | 3 cut(s) | 40, 328, 491 |
| SchI | GAGTC | 2 cut(s) | 143, 181 |
| SetI | ASST | 6 cut(s) | 22, 122, 207, 343, 405, 414 |
| SfaNI | GCATC | 3 cut(s) | 188, 235, 378 |
| SfcI | CTRYAG | 1 cut(s) | 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| SmlI | CTYRAG | 3 cut(s) | 373, 407, 440 |
| SmoI | CTYRAG | 3 cut(s) | 373, 407, 440 |
| SpeI | ACTAGT | 1 cut(s) | 299 |
| SsiI | CCGC | 1 cut(s) | 177 |
| SspMI | CTAG | 4 cut(s) | 50, 242, 300, 338 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TaqII | GACCGA | 1 cut(s) | 12 |
| TfiI | GAWTC | 1 cut(s) | 436 |
| Tru1I | TTAA | 2 cut(s) | 144, 482 |
| Tru9I | TTAA | 2 cut(s) | 144, 482 |
| TscAI | CASTG | 1 cut(s) | 222 |
| TseFI | GTSAC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 1 cut(s) | 302 |
| TspDTI | ATGAA | 3 cut(s) | 17, 243, 464 |
| TspRI | CASTG | 1 cut(s) | 222 |
| XbaI | TCTAGA | 1 cut(s) | 241 |
| XceI | RCATGY | 1 cut(s) | 475 |
| XmaJI | CCTAGG | 1 cut(s) | 49 |
| XmnI | GAANNNNTTC | 1 cut(s) | 275 |
| XspI | CTAG | 4 cut(s) | 50, 242, 300, 338 |