prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23096 |
| fragaria_vesca | FvH4_1g17210 FvH4_1g17210 FvH4_1g17210 |
| malus_domestica | MD02G1182100.v1.1 MD15G1293300.v1.1 |
| prunus_persica | Prupe.6G224300_v2.0.a1 |
| pyrus_communis | pycom15g25630 |
| rosa_chinensis | RchiOBHm_Chr2g0107361 |
| rosa_laevigata | RLG00000017573 |
| rosa_multiflora | Rmu_co8505661.1_g000001 Rmu_sc0010952.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00136400 |
| rosa_rugosa | Rorug02G0142600 Rorug03G0188400 |
| rosa_samantha | Rh2AG193100 Rh2BG205300 Rh2BG205400 Rh2CG198400 Rh2DG200400 |
| rosa_wichuraiana | Rw2G015300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 98 |
| AclI | AACGTT | 1 cut(s) | 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 110 |
| AjnI | CCWGG | 2 cut(s) | 109, 325 |
| Alw26I | GTCTC | 1 cut(s) | 112 |
| AspS9I | GGNCC | 1 cut(s) | 161 |
| AsuC2I | CCSGG | 1 cut(s) | 165 |
| AsuHPI | GGTGA | 1 cut(s) | 314 |
| AvaII | GGWCC | 1 cut(s) | 161 |
| BccI | CCATC | 4 cut(s) | 20, 266, 293, 311 |
| BciT130I | CCWGG | 2 cut(s) | 111, 327 |
| BcnI | CCSGG | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 112 |
| BfmI | CTRYAG | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 3 cut(s) | 111, 165, 327 |
| Bme18I | GGWCC | 1 cut(s) | 161 |
| BmgT120I | GGNCC | 1 cut(s) | 161 |
| BmrFI | CCNGG | 3 cut(s) | 111, 165, 327 |
| BmsI | GCATC | 1 cut(s) | 255 |
| BpmI | CTGGAG | 1 cut(s) | 348 |
| BpuMI | CCSGG | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 1 cut(s) | 362 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseBI | CCWGG | 2 cut(s) | 111, 327 |
| BseDI | CCNNGG | 1 cut(s) | 362 |
| BseGI | GGATG | 2 cut(s) | 270, 304 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseMII | CTCAG | 1 cut(s) | 86 |
| BsiSI | CCGG | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BsmAI | GTCTC | 1 cut(s) | 112 |
| Bsp143I | GATC | 1 cut(s) | 33 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BssECI | CCNNGG | 1 cut(s) | 362 |
| BssMI | GATC | 1 cut(s) | 33 |
| BssT1I | CCWWGG | 1 cut(s) | 362 |
| Bst2UI | CCWGG | 2 cut(s) | 111, 327 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 247 |
| BstDEI | CTNAG | 2 cut(s) | 15, 72 |
| BstF5I | GGATG | 2 cut(s) | 270, 304 |
| BstKTI | GATC | 1 cut(s) | 36 |
| BstMAI | GTCTC | 1 cut(s) | 112 |
| BstMBI | GATC | 1 cut(s) | 33 |
| BstNI | CCWGG | 2 cut(s) | 111, 327 |
| BstSCI | CCNGG | 3 cut(s) | 109, 163, 325 |
| BstSFI | CTRYAG | 1 cut(s) | 130 |
| BtsCI | GGATG | 2 cut(s) | 270, 304 |
| BtsIMutI | CAGTG | 2 cut(s) | 243, 349 |
| Cfr13I | GGNCC | 1 cut(s) | 161 |
| CpoI | CGGWCCG | 1 cut(s) | 161 |
| CspI | CGGWCCG | 1 cut(s) | 161 |
| CviAII | CATG | 1 cut(s) | 50 |
| CviJI | RGCY | 3 cut(s) | 54, 67, 103 |
| CviKI_1 | RGCY | 3 cut(s) | 54, 67, 103 |
| DdeI | CTNAG | 2 cut(s) | 15, 72 |
| DpnI | GATC | 1 cut(s) | 35 |
| DpnII | GATC | 1 cut(s) | 33 |
| DraI | TTTAAA | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 1 cut(s) | 362 |
| Eco47I | GGWCC | 1 cut(s) | 161 |
| EcoRII | CCWGG | 2 cut(s) | 109, 325 |
| EcoT14I | CCWWGG | 1 cut(s) | 362 |
| ErhI | CCWWGG | 1 cut(s) | 362 |
| FaeI | CATG | 1 cut(s) | 53 |
| FaiI | YATR | 7 cut(s) | 51, 98, 222, 294, 311, 371, 373 |
| FatI | CATG | 1 cut(s) | 49 |
| FokI | GGATG | 2 cut(s) | 277, 311 |
| GsuI | CTGGAG | 1 cut(s) | 348 |
| HapII | CCGG | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 53 |
| HpaII | CCGG | 1 cut(s) | 164 |
| HphI | GGTGA | 1 cut(s) | 314 |
| Hpy166II | GTNNAC | 1 cut(s) | 305 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy8I | GTNNAC | 1 cut(s) | 305 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpyCH4V | TGCA | 2 cut(s) | 49, 268 |
| HpyF3I | CTNAG | 2 cut(s) | 15, 72 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| Hsp92II | CATG | 1 cut(s) | 53 |
| Kzo9I | GATC | 1 cut(s) | 33 |
| LpnPI | CCDG | 9 cut(s) | 48, 59, 96, 123, 136, 176, 177, 312, 339 |
| LweI | GCATC | 1 cut(s) | 255 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MaeIII | GTNAC | 2 cut(s) | 125, 206 |
| MalI | GATC | 1 cut(s) | 35 |
| MboI | GATC | 1 cut(s) | 33 |
| MboII | GAAGA | 1 cut(s) | 100 |
| MluCI | AATT | 1 cut(s) | 312 |
| MmeI | TCCRAC | 1 cut(s) | 199 |
| MnlI | CCTC | 5 cut(s) | 75, 133, 223, 274, 289 |
| MseI | TTAA | 2 cut(s) | 216, 335 |
| MspI | CCGG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 3 cut(s) | 111, 165, 327 |
| MvaI | CCWGG | 2 cut(s) | 111, 327 |
| NciI | CCSGG | 1 cut(s) | 165 |
| NdeII | GATC | 1 cut(s) | 33 |
| NlaIII | CATG | 1 cut(s) | 53 |
| PfoI | TCCNGGA | 1 cut(s) | 163 |
| PsiI | TTATAA | 1 cut(s) | 98 |
| Psp1406I | AACGTT | 1 cut(s) | 93 |
| Psp6I | CCWGG | 2 cut(s) | 109, 325 |
| PspGI | CCWGG | 2 cut(s) | 109, 325 |
| PspPI | GGNCC | 1 cut(s) | 161 |
| Rsr2I | CGGWCCG | 1 cut(s) | 161 |
| RsrII | CGGWCCG | 1 cut(s) | 161 |
| SaqAI | TTAA | 2 cut(s) | 216, 335 |
| Sau3AI | GATC | 1 cut(s) | 33 |
| Sau96I | GGNCC | 1 cut(s) | 161 |
| ScrFI | CCNGG | 3 cut(s) | 111, 165, 327 |
| SetI | ASST | 8 cut(s) | 78, 96, 144, 195, 285, 328, 356, 364 |
| SfaNI | GCATC | 1 cut(s) | 255 |
| SfcI | CTRYAG | 1 cut(s) | 130 |
| SinI | GGWCC | 1 cut(s) | 161 |
| Sse9I | AATT | 1 cut(s) | 312 |
| StyD4I | CCNGG | 3 cut(s) | 109, 163, 325 |
| StyI | CCWWGG | 1 cut(s) | 362 |
| TaaI | ACNGT | 2 cut(s) | 131, 247 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqII | GACCGA | 1 cut(s) | 149 |
| TasI | AATT | 1 cut(s) | 312 |
| Tru1I | TTAA | 2 cut(s) | 216, 335 |
| Tru9I | TTAA | 2 cut(s) | 216, 335 |
| TscAI | CASTG | 2 cut(s) | 250, 349 |
| TspDTI | ATGAA | 2 cut(s) | 17, 237 |
| TspGWI | ACGGA | 1 cut(s) | 200 |
| TspRI | CASTG | 2 cut(s) | 250, 349 |
| VpaK11BI | GGWCC | 1 cut(s) | 161 |