homeobox protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62360 |
| fragaria_vesca | FvH4_3g01400 FvH4_3g01400 FvH4_3g01400 FvH4_3g01400 FvH4_6g42570 FvH4_6g42570 |
| malus_domestica | MD05G1352500.v1.1 MD09G1112500.v1.1 MD10G1276200.v1.1 MD10G1326500.v1.1 MD17G1102600.v1.1 |
| prunus_persica | Prupe.3G212100_v2.0.a1 Prupe.4G015200_v2.0.a1 Prupe.4G015200_v2.0.a1 |
| pyrus_communis | pycom05g31940 pycom09g03690 pycom10g27650 pycom17g09700 |
| rosa_chinensis | RchiOBHm_Chr2g0158421 RchiOBHm_Chr5g0002121 |
| rosa_laevigata | RLG00000021086 RLG00000030997 |
| rosa_multiflora | Rmu_sc0004855.1_g000009 Rmu_ssc0000001.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00073790 Rroxscaffold_2G00091400 |
| rosa_rugosa | Rorug02G0468500 Rorug02G0468600 Rorug04G0394500 Rorug04G0394500 |
| rosa_samantha | Rh2AG534700 Rh2BG548100 Rh2CG518500 Rh2DG557700 Rh5AG016200 Rh5BG019600 Rh5CG017500 Rh5DG017700 |
| rosa_wichuraiana | Rw2G044280 Rw5G001580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1570 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1007, 1511 |
| AccI | GTMKAC | 1 cut(s) | 124 |
| AciI | CCGC | 4 cut(s) | 109, 701, 868, 1311 |
| AclWI | GGATC | 4 cut(s) | 715, 891, 1064, 1522 |
| AcoI | YGGCCR | 2 cut(s) | 776, 1308 |
| AcsI | RAATTY | 1 cut(s) | 1285 |
| AdeI | CACNNNGTG | 1 cut(s) | 524 |
| AfaI | GTAC | 7 cut(s) | 179, 305, 437, 481, 607, 1433, 1455 |
| AfeI | AGCGCT | 1 cut(s) | 230 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 300, 307, 1007, 1511, 1526 |
| AgsI | TTSAA | 8 cut(s) | 280, 287, 553, 760, 956, 1259, 1326, 1377 |
| AjnI | CCWGG | 3 cut(s) | 870, 958, 1229 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 483, 515 |
| AluBI | AGCT | 3 cut(s) | 283, 392, 928 |
| AluI | AGCT | 3 cut(s) | 283, 392, 928 |
| Alw26I | GTCTC | 2 cut(s) | 566, 801 |
| AlwI | GGATC | 4 cut(s) | 715, 891, 1064, 1522 |
| Aor51HI | AGCGCT | 1 cut(s) | 230 |
| AoxI | GGCC | 3 cut(s) | 242, 776, 1308 |
| ApeKI | GCWGC | 3 cut(s) | 40, 187, 1313 |
| ApoI | RAATTY | 1 cut(s) | 1285 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 393, 1116 |
| AspLEI | GCGC | 2 cut(s) | 231, 313 |
| AspS9I | GGNCC | 6 cut(s) | 243, 545, 578, 671, 1010, 1559 |
| AsuC2I | CCSGG | 1 cut(s) | 1281 |
| AsuHPI | GGTGA | 5 cut(s) | 148, 265, 659, 1078, 1509 |
| AvaII | GGWCC | 5 cut(s) | 545, 578, 671, 1010, 1559 |
| BaeGI | GKGCMC | 1 cut(s) | 1141 |
| BalI | TGGCCA | 1 cut(s) | 778 |
| BauI | CACGAG | 1 cut(s) | 721 |
| BbsI | GAAGAC | 1 cut(s) | 268 |
| BbvI | GCAGC | 3 cut(s) | 27, 199, 1325 |
| BccI | CCATC | 2 cut(s) | 136, 1500 |
| BciT130I | CCWGG | 3 cut(s) | 872, 960, 1231 |
| BciVI | GTATCC | 1 cut(s) | 901 |
| BclI | TGATCA | 3 cut(s) | 193, 513, 817 |
| BcnI | CCSGG | 1 cut(s) | 1281 |
| BcoDI | GTCTC | 2 cut(s) | 566, 801 |
| BfaI | CTAG | 2 cut(s) | 324, 1553 |
| BfmI | CTRYAG | 1 cut(s) | 1404 |
| BfoI | RGCGCY | 2 cut(s) | 232, 314 |
| BfuI | GTATCC | 1 cut(s) | 901 |
| BisI | GCNGC | 4 cut(s) | 41, 188, 1311, 1314 |
| BlsI | GCNGC | 4 cut(s) | 42, 189, 1312, 1315 |
| BmcAI | AGTACT | 1 cut(s) | 437 |
| Bme1390I | CCNGG | 4 cut(s) | 872, 960, 1231, 1281 |
| Bme18I | GGWCC | 5 cut(s) | 545, 578, 671, 1010, 1559 |
| BmgT120I | GGNCC | 6 cut(s) | 243, 545, 578, 671, 1010, 1559 |
| BmiI | GGNNCC | 2 cut(s) | 580, 673 |
| BmrFI | CCNGG | 4 cut(s) | 872, 960, 1231, 1281 |
| BmsI | GCATC | 1 cut(s) | 1041 |
| BpiI | GAAGAC | 1 cut(s) | 268 |
| BpmI | CTGGAG | 1 cut(s) | 893 |
| BpuEI | CTTGAG | 2 cut(s) | 783, 908 |
| BpuMI | CCSGG | 1 cut(s) | 1281 |
| Bsa29I | ATCGAT | 1 cut(s) | 1153 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1074 |
| BsaI | GGTCTC | 1 cut(s) | 566 |
| BsaJI | CCNNGG | 1 cut(s) | 1525 |
| BsaWI | WCCGGW | 1 cut(s) | 300 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 300, 307, 1007, 1511, 1526 |
| Bse1I | ACTGG | 2 cut(s) | 1317, 1355 |
| Bse3DI | GCAATG | 2 cut(s) | 14, 104 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1074 |
| BseBI | CCWGG | 3 cut(s) | 872, 960, 1231 |
| BseCI | ATCGAT | 1 cut(s) | 1153 |
| BseDI | CCNNGG | 1 cut(s) | 1525 |
| BseGI | GGATG | 4 cut(s) | 516, 636, 1032, 1276 |
| BseJI | GATNNNNATC | 1 cut(s) | 1074 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 300, 307, 1007, 1511, 1526 |
| BseMI | GCAATG | 2 cut(s) | 14, 104 |
| BseMII | CTCAG | 3 cut(s) | 606, 806, 1122 |
| BseNI | ACTGG | 2 cut(s) | 1317, 1355 |
| BseSI | GKGCMC | 1 cut(s) | 1141 |
| BseXI | GCAGC | 3 cut(s) | 27, 199, 1325 |
| BseYI | CCCAGC | 3 cut(s) | 91, 617, 703 |
| Bsh1285I | CGRYCG | 1 cut(s) | 841 |
| BshFI | GGCC | 3 cut(s) | 244, 778, 1310 |
| BshVI | ATCGAT | 1 cut(s) | 1153 |
| BsiEI | CGRYCG | 1 cut(s) | 841 |
| BsiSI | CCGG | 2 cut(s) | 301, 1281 |
| BslFI | GGGAC | 4 cut(s) | 40, 564, 657, 872 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 300, 307, 1007, 1511, 1526 |
| BsmAI | GTCTC | 2 cut(s) | 566, 801 |
| BsmFI | GGGAC | 4 cut(s) | 40, 564, 657, 872 |
| BsnI | GGCC | 3 cut(s) | 244, 778, 1310 |
| Bso31I | GGTCTC | 1 cut(s) | 566 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1141 |
| BspACI | CCGC | 4 cut(s) | 109, 701, 868, 1311 |
| BspANI | GGCC | 3 cut(s) | 244, 778, 1310 |
| BspCNI | CTCAG | 3 cut(s) | 605, 805, 1121 |
| BspDI | ATCGAT | 1 cut(s) | 1153 |
| BspLI | GGNNCC | 2 cut(s) | 580, 673 |
| BspPI | GGATC | 4 cut(s) | 715, 891, 1064, 1522 |
| BspTNI | GGTCTC | 1 cut(s) | 566 |
| BsrDI | GCAATG | 2 cut(s) | 14, 104 |
| BsrI | ACTGG | 2 cut(s) | 1317, 1355 |
| BssECI | CCNNGG | 1 cut(s) | 1525 |
| BssSI | CACGAG | 1 cut(s) | 721 |
| BssT1I | CCWWGG | 1 cut(s) | 1525 |
| Bst2BI | CACGAG | 1 cut(s) | 721 |
| Bst2UI | CCWGG | 3 cut(s) | 872, 960, 1231 |
| Bst4CI | ACNGT | 3 cut(s) | 154, 1202, 1511 |
| BstDEI | CTNAG | 4 cut(s) | 232, 592, 792, 1108 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1524 |
| BstF5I | GGATG | 4 cut(s) | 516, 636, 1032, 1276 |
| BstH2I | RGCGCY | 2 cut(s) | 232, 314 |
| BstHHI | GCGC | 2 cut(s) | 231, 313 |
| BstMAI | GTCTC | 2 cut(s) | 566, 801 |
| BstMCI | CGRYCG | 1 cut(s) | 841 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1310 |
| BstNI | CCWGG | 3 cut(s) | 872, 960, 1231 |
| BstNSI | RCATGY | 1 cut(s) | 1337 |
| BstSCI | CCNGG | 4 cut(s) | 870, 958, 1229, 1279 |
| BstSFI | CTRYAG | 1 cut(s) | 1404 |
| BstSLI | GKGCMC | 1 cut(s) | 1141 |
| BstV1I | GCAGC | 3 cut(s) | 27, 199, 1325 |
| BstV2I | GAAGAC | 1 cut(s) | 268 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 617 |
| Bsu15I | ATCGAT | 1 cut(s) | 1153 |
| BsuI | GTATCC | 1 cut(s) | 901 |
| BsuRI | GGCC | 3 cut(s) | 244, 778, 1310 |
| BsuTUI | ATCGAT | 1 cut(s) | 1153 |
| BtsCI | GGATG | 4 cut(s) | 516, 636, 1032, 1276 |
| BtsI | GCAGTG | 1 cut(s) | 1044 |
| BtsIMutI | CAGTG | 4 cut(s) | 600, 1044, 1207, 1450 |
| CfoI | GCGC | 2 cut(s) | 231, 313 |
| Cfr13I | GGNCC | 6 cut(s) | 243, 545, 578, 671, 1010, 1559 |
| ClaI | ATCGAT | 1 cut(s) | 1153 |
| Csp6I | GTAC | 7 cut(s) | 178, 304, 436, 480, 606, 1432, 1454 |
| CviQI | GTAC | 7 cut(s) | 178, 304, 436, 480, 606, 1432, 1454 |
| DdeI | CTNAG | 4 cut(s) | 232, 592, 792, 1108 |
| DraIII | CACNNNGTG | 1 cut(s) | 524 |
| EaeI | YGGCCR | 2 cut(s) | 776, 1308 |
| EciI | GGCGGA | 1 cut(s) | 857 |
| Eco130I | CCWWGG | 1 cut(s) | 1525 |
| Eco31I | GGTCTC | 1 cut(s) | 566 |
| Eco47I | GGWCC | 5 cut(s) | 545, 578, 671, 1010, 1559 |
| Eco47III | AGCGCT | 1 cut(s) | 230 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1524 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1559 |
| EcoRII | CCWGG | 3 cut(s) | 870, 958, 1229 |
| EcoT14I | CCWWGG | 1 cut(s) | 1525 |
| EcoT22I | ATGCAT | 1 cut(s) | 214 |
| ErhI | CCWWGG | 1 cut(s) | 1525 |
| FaqI | GGGAC | 4 cut(s) | 40, 564, 657, 872 |
| FauNDI | CATATG | 2 cut(s) | 214, 496 |
| FbaI | TGATCA | 3 cut(s) | 193, 513, 817 |
| FblI | GTMKAC | 1 cut(s) | 124 |
| Fnu4HI | GCNGC | 4 cut(s) | 41, 188, 1311, 1314 |
| FokI | GGATG | 4 cut(s) | 523, 643, 1019, 1263 |
| Fsp4HI | GCNGC | 4 cut(s) | 41, 188, 1311, 1314 |
| FspBI | CTAG | 2 cut(s) | 324, 1553 |
| GlaI | GCGC | 2 cut(s) | 230, 312 |
| GluI | GCNGC | 4 cut(s) | 41, 188, 1311, 1314 |
| GsaI | CCCAGC | 3 cut(s) | 95, 621, 707 |
| GsuI | CTGGAG | 1 cut(s) | 893 |
| HaeII | RGCGCY | 2 cut(s) | 232, 314 |
| HaeIII | GGCC | 3 cut(s) | 244, 778, 1310 |
| HapII | CCGG | 2 cut(s) | 301, 1281 |
| HhaI | GCGC | 2 cut(s) | 231, 313 |
| Hin6I | GCGC | 2 cut(s) | 229, 311 |
| HinP1I | GCGC | 2 cut(s) | 229, 311 |
| HincII | GTYRAC | 1 cut(s) | 125 |
| HindII | GTYRAC | 1 cut(s) | 125 |
| HindIII | AAGCTT | 1 cut(s) | 281 |
| HinfI | GANTC | 6 cut(s) | 116, 491, 921, 1163, 1273, 1530 |
| HpaII | CCGG | 2 cut(s) | 301, 1281 |
| HphI | GGTGA | 5 cut(s) | 148, 265, 659, 1078, 1509 |
| Hpy166II | GTNNAC | 4 cut(s) | 125, 169, 1396, 1454 |
| Hpy188I | TCNGA | 6 cut(s) | 319, 817, 838, 1054, 1111, 1168 |
| Hpy188III | TCNNGA | 4 cut(s) | 733, 769, 800, 918 |
| Hpy8I | GTNNAC | 4 cut(s) | 125, 169, 1396, 1454 |
| HpyAV | CCTTC | 7 cut(s) | 230, 638, 646, 819, 1469, 1550, 1572 |
| HpyCH4III | ACNGT | 3 cut(s) | 154, 1202, 1511 |
| HpyCH4IV | ACGT | 3 cut(s) | 355, 573, 1141 |
| HpyCH4V | TGCA | 6 cut(s) | 187, 212, 466, 1101, 1333, 1471 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1310 |
| HpyF3I | CTNAG | 4 cut(s) | 232, 592, 792, 1108 |
| HpySE526I | ACGT | 3 cut(s) | 355, 573, 1141 |
| HspAI | GCGC | 2 cut(s) | 229, 311 |
| Ksp22I | TGATCA | 3 cut(s) | 193, 513, 817 |
| LmnI | GCTCC | 2 cut(s) | 703, 870 |
| Lsp1109I | GCAGC | 3 cut(s) | 27, 199, 1325 |
| LweI | GCATC | 1 cut(s) | 1041 |
| MaeI | CTAG | 2 cut(s) | 324, 1553 |
| MaeII | ACGT | 3 cut(s) | 355, 573, 1141 |
| MaeIII | GTNAC | 2 cut(s) | 148, 1225 |
| MboII | GAAGA | 5 cut(s) | 151, 268, 804, 1160, 1217 |
| MfeI | CAATTG | 3 cut(s) | 441, 951, 1298 |
| MhlI | GDGCHC | 1 cut(s) | 1141 |
| MlsI | TGGCCA | 1 cut(s) | 778 |
| MluNI | TGGCCA | 1 cut(s) | 778 |
| MlyI | GAGTC | 3 cut(s) | 915, 1157, 1267 |
| MmeI | TCCRAC | 4 cut(s) | 297, 452, 861, 1103 |
| MnlI | CCTC | 6 cut(s) | 409, 439, 599, 643, 1008, 1060 |
| Mox20I | TGGCCA | 1 cut(s) | 778 |
| Mph1103I | ATGCAT | 1 cut(s) | 214 |
| MroXI | GAANNNNTTC | 2 cut(s) | 393, 1116 |
| MscI | TGGCCA | 1 cut(s) | 778 |
| MseI | TTAA | 3 cut(s) | 162, 690, 1344 |
| Msp20I | TGGCCA | 1 cut(s) | 778 |
| MspA1I | CMGCKG | 1 cut(s) | 703 |
| MspI | CCGG | 2 cut(s) | 301, 1281 |
| MspR9I | CCNGG | 4 cut(s) | 872, 960, 1231, 1281 |
| MunI | CAATTG | 3 cut(s) | 441, 951, 1298 |
| MvaI | CCWGG | 3 cut(s) | 872, 960, 1231 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1310 |
| NciI | CCSGG | 1 cut(s) | 1281 |
| NdeI | CATATG | 2 cut(s) | 214, 496 |
| NlaIV | GGNNCC | 2 cut(s) | 580, 673 |
| NmuCI | GTSAC | 2 cut(s) | 148, 1225 |
| NsiI | ATGCAT | 1 cut(s) | 214 |
| NspI | RCATGY | 1 cut(s) | 1337 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1065 |
| PdmI | GAANNNNTTC | 2 cut(s) | 393, 1116 |
| PfeI | GAWTC | 3 cut(s) | 116, 491, 1530 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1007, 1511 |
| PfoI | TCCNGGA | 1 cut(s) | 1279 |
| PkrI | GCNGC | 4 cut(s) | 42, 189, 1312, 1315 |
| PleI | GAGTC | 3 cut(s) | 915, 1157, 1267 |
| PpsI | GAGTC | 3 cut(s) | 915, 1157, 1267 |
| PpuMI | RGGWCCY | 1 cut(s) | 1559 |
| PsiI | TTATAA | 1 cut(s) | 1570 |
| Psp5II | RGGWCCY | 1 cut(s) | 1559 |
| Psp6I | CCWGG | 3 cut(s) | 870, 958, 1229 |
| PspFI | CCCAGC | 3 cut(s) | 91, 617, 703 |
| PspGI | CCWGG | 3 cut(s) | 870, 958, 1229 |
| PspN4I | GGNNCC | 2 cut(s) | 580, 673 |
| PspPI | GGNCC | 6 cut(s) | 243, 545, 578, 671, 1010, 1559 |
| PspPPI | RGGWCCY | 1 cut(s) | 1559 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1424, 1456 |
| RsaI | GTAC | 7 cut(s) | 179, 305, 437, 481, 607, 1433, 1455 |
| RsaNI | GTAC | 7 cut(s) | 178, 304, 436, 480, 606, 1432, 1454 |
| SalI | GTCGAC | 1 cut(s) | 123 |
| SaqAI | TTAA | 3 cut(s) | 162, 690, 1344 |
| SatI | GCNGC | 4 cut(s) | 41, 188, 1311, 1314 |
| Sau96I | GGNCC | 6 cut(s) | 243, 545, 578, 671, 1010, 1559 |
| ScaI | AGTACT | 1 cut(s) | 437 |
| SchI | GAGTC | 3 cut(s) | 915, 1157, 1267 |
| ScrFI | CCNGG | 4 cut(s) | 872, 960, 1231, 1281 |
| SduI | GDGCHC | 1 cut(s) | 1141 |
| SfaNI | GCATC | 1 cut(s) | 1041 |
| SfcI | CTRYAG | 1 cut(s) | 1404 |
| SinI | GGWCC | 5 cut(s) | 545, 578, 671, 1010, 1559 |
| SmlI | CTYRAG | 2 cut(s) | 798, 923 |
| SmoI | CTYRAG | 2 cut(s) | 798, 923 |
| SsiI | CCGC | 4 cut(s) | 109, 701, 868, 1311 |
| SspMI | CTAG | 2 cut(s) | 324, 1553 |
| StyD4I | CCNGG | 4 cut(s) | 870, 958, 1229, 1279 |
| StyI | CCWWGG | 1 cut(s) | 1525 |
| TaaI | ACNGT | 3 cut(s) | 154, 1202, 1511 |
| TaiI | ACGT | 3 cut(s) | 358, 576, 1144 |
| TaqI | TCGA | 3 cut(s) | 124, 1059, 1153 |
| TaqII | GACCGA | 3 cut(s) | 533, 659, 855 |
| TatI | WGTACW | 2 cut(s) | 435, 1431 |
| TauI | GCSGC | 1 cut(s) | 1313 |
| TfiI | GAWTC | 3 cut(s) | 116, 491, 1530 |
| Tru1I | TTAA | 3 cut(s) | 162, 690, 1344 |
| Tru9I | TTAA | 3 cut(s) | 162, 690, 1344 |
| TscAI | CASTG | 4 cut(s) | 600, 1051, 1207, 1450 |
| TseFI | GTSAC | 2 cut(s) | 148, 1225 |
| TseI | GCWGC | 3 cut(s) | 40, 187, 1313 |
| Tsp45I | GTSAC | 2 cut(s) | 148, 1225 |
| TspDTI | ATGAA | 9 cut(s) | 325, 366, 386, 819, 1161, 1260, 1412, 1488, 1554 |
| TspRI | CASTG | 4 cut(s) | 600, 1051, 1207, 1450 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1007, 1511 |
| VpaK11BI | GGWCC | 5 cut(s) | 545, 578, 671, 1010, 1559 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1524 |
| XapI | RAATTY | 1 cut(s) | 1285 |
| XceI | RCATGY | 1 cut(s) | 1337 |
| XmiI | GTMKAC | 1 cut(s) | 124 |
| XmnI | GAANNNNTTC | 2 cut(s) | 393, 1116 |
| XspI | CTAG | 2 cut(s) | 324, 1553 |
| ZrmI | AGTACT | 1 cut(s) | 437 |
| Zsp2I | ATGCAT | 1 cut(s) | 214 |