Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006159

Physical Location & Seq

Genomic Coordinates Forward (+)

4547605 .. 4551973

Gene Structure 4369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0060900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGCGTGTTTTATTGACTTATGGCTTTGATCCTATAAATGGATCAGTACAAAACAGGTCACTTCTAAAACAAAAAACCGTTAAAACTGTAGTCCGTAAGTTGCTTCATCAGGTTGTCAAGCTGAGTTCAGTTCCAATAGATCCTAGTCTACCTCCTCCGGTGATAAAAAAGCCACCCCCAAAAGTGAAGCAGCCTCCTCCCCCTCCAAGAAAACGAGTTGGACGTGATGACATTGAGATGAAAAAAGGGGACTGGCTATGCTCTAAGTGCGACTTCATGAATTTTGCCAAGAACAGCCTGTGCCTGCAGTGTGATGCCAAGCGTCCAAAGAGACAGTTGCTTCCAGGAGAATGGGAGTGCCCAGAGTGCAACTTTTTAAATTACAGGAGAAATATGGCATGTTTTCATTGTGATTGCAAGCGCCCACCTGATGAATATATTGAGAACAACATGCAAGAAAAGCAACGTGGCCCTAGGACTAGGATGGATAAGACTGCGATTCGGCCTGAGGCATCTAATGCCTGGAATTTTGATTTTGATGACAATGAGTCAGATGGGGCAGATGTTGCTGCTTTTGAGTATGCGGATCCAGTAATGAGTGAAGGGTCTCTTGACACCCAGGCTCAAGGGGAAAATTTTCGACGTCCTGAATATGATTTCAGTAAAAATAGGAGAGTGTCAAGGGTTGACAATGAAGAATATTCTGATGCTGACACTATTAAGCCAGGCAGAGGGTTTGATGATTTTGATGATGAAGATGATGATATTGACAATTACGAGTTGGACACTCGTCCTAAAGATTCAGCACAGAACACTTCTTCAATTGATTTTTCTGAATTGGAGGGATCTGAATCAGAAAACAGTGAAGGTCCCGACAATAATTTGCATGCTCGCAAAACACTCTCTCCATCTTACAATAAGCCATCTAAGTCTATGCATCGACGGGCAGCATTATCTGTCTCAGATGATGATGAAATTGATTTAAATTCTGACGAAGACCTTTCAGTTCTTCCCAACCGAAGATCAAGTCATGTTGCTGATTCTAGATCAAGAGGTAGGGGTAGAAACTCAACTGGTCCATCAAAGAGAGTAAGCTTTGTATCTGATGATGAAGCTGGGCTCTACTCTGATGTGGATGATGATCTAGATCAAAATATTAGATCCAGACAAGGTAAACTGAACAAATTGAGTTCTGGGAGAAAAGACTTTCAGAGGAGAAGAAATTTTGATAGGGAAGATGATTCAATGTCTGGTTCAGAATCAGAGAATGATGATTTTCATTCTCATAAAAATAGGCACAGAGGAAATAAACCAAACAGTTTCAAAGGTACACAATTTAAATCCAGCGGAATGAAGAGTGGCAGGAAGAACTCTTTCAGTGATGATGACTTTGATAGACCAACCCGAGGGTCTCGTGATAACAGAGAATTTCGAGGGAATGATTTTGATGGCAAGAGAATGAGTAACAGAGGTGTTGATAGGCAGAATTTTAAGGGGCCTAAAAGAGAAGCATTTGGAAATGGTGGTAGGAGAAACTCTTTTGGTGATGATTTTGATAGATCTAAACAAGTATCTCGTGGTAATAACAGAGGATTTCGGGAAAACAACTTTGATGGGCAGAGAATGAGTAACCGTGGCTTTGATAAACATGATTTTAAGGGACCTAAAAGAGAAGGATTTGGAAAGCAGCAGCGTGAAAGATTTAATAATGATTGGGACAAGGACAGGGACTTTGGTAACTTTAGCAATAGTCGACGCGTTATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010087 GO:0010088 GO:0010089 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

590

Amino Acids

67.88

Weight (kDa)

8.53

Isoelectric Point (pI)

51.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	81 - 109	2.7e-08	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11200 AT3G11200 AT5G05610 AT5G05610
fragaria_vesca	FvH4_6g11380 FvH4_7g24541
malus_domestica	MD01G1153500.v1.1 MD04G1154200.v1.1 MD07G1222500.v1.1 MD12G1167600.v1.1
prunus_persica	Prupe.2G250800_v2.0.a1 Prupe.6G278200_v2.0.a1
pyrus_communis	pycom01g17110 pycom07g20120 pycom12g15930
rosa_chinensis	RchiOBHm_Chr1g0370381 RchiOBHm_Chr3g0463001
rosa_laevigata	RLG00000024818 RLG00000027053
rosa_multiflora	Rmu_sc0000766.1_g000027 Rmu_sc0012102.1_g000001
rosa_roxburghii	Rroxscaffold_6G00417060
rosa_rugosa	Rorug01G0356000 Rorug03G0060900
rosa_samantha	Rh1AG364300
rosa_wichuraiana	Rw1G032060 Rw3G010070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	646
AccI	GTMKAC	2 cut(s)	148, 1753
AccII	CGCG	1 cut(s)	1758
AciI	CCGC	2 cut(s)	584, 1347
AclWI	GGATC	7 cut(s)	23, 49, 134, 581, 594, 853, 1155
AcsI	RAATTY	7 cut(s)	280, 526, 634, 985, 1222, 1427, 1486
AcyI	GRCGYC	1 cut(s)	643
AfaI	GTAC	2 cut(s)	48, 1330
AfiI	CCNNNNNNNGG	3 cut(s)	38, 731, 1406
AflIII	ACRYGT	1 cut(s)	1756
AgsI	TTSAA	4 cut(s)	822, 1245, 1324, 1766
AhdI	GACNNNNNGTC	1 cut(s)	547
AjiI	CACGTC	1 cut(s)	224
AjnI	CCWGG	4 cut(s)	343, 521, 618, 724
AluBI	AGCT	3 cut(s)	121, 1095, 1115
AluI	AGCT	3 cut(s)	121, 1095, 1115
Alw26I	GTCTC	4 cut(s)	325, 612, 964, 1416
AlwI	GGATC	7 cut(s)	23, 49, 134, 581, 594, 853, 1155
Ama87I	CYCGRG	1 cut(s)	1404
AoxI	GGCC	3 cut(s)	469, 503, 1496
ApeKI	GCWGC	5 cut(s)	190, 569, 947, 1687, 1690
ApoI	RAATTY	7 cut(s)	280, 526, 634, 985, 1222, 1427, 1486
ArsI	GACNNNNNNTTYG	4 cut(s)	1012, 1044, 1715, 1747
Asp700I	GAANNNNTTC	2 cut(s)	636, 1373
AspA2I	CCTAGG	1 cut(s)	473
AspLEI	GCGC	1 cut(s)	423
AspS9I	GGNCC	5 cut(s)	470, 869, 1076, 1496, 1661
AsuHPI	GGTGA	2 cut(s)	172, 1556
AvaI	CYCGRG	1 cut(s)	1404
AvaII	GGWCC	3 cut(s)	869, 1076, 1661
AvrII	CCTAGG	1 cut(s)	473
AxyI	CCTNAGG	1 cut(s)	507
BaeGI	GKGCMC	1 cut(s)	362
BamHI	GGATCC	1 cut(s)	586
BanII	GRGCYC	1 cut(s)	1122
BauI	CACGAG	2 cut(s)	1413, 1575
BbsI	GAAGAC	1 cut(s)	1002
BbvI	GCAGC	5 cut(s)	202, 556, 959, 1699, 1702
BccI	CCATC	7 cut(s)	478, 548, 916, 931, 1087, 1442, 1607
BciT130I	CCWGG	4 cut(s)	345, 523, 620, 726
BcoDI	GTCTC	4 cut(s)	325, 612, 964, 1416
BfaI	CTAG	5 cut(s)	144, 474, 480, 1044, 1145
BfmI	CTRYAG	2 cut(s)	87, 305
BfoI	RGCGCY	1 cut(s)	424
BglII	AGATCT	1 cut(s)	1559
BisI	GCNGC	5 cut(s)	191, 570, 948, 1688, 1691
BlnI	CCTAGG	1 cut(s)	473
BlsI	GCNGC	5 cut(s)	192, 571, 949, 1689, 1692
Bme1390I	CCNGG	4 cut(s)	345, 523, 620, 726
Bme18I	GGWCC	3 cut(s)	869, 1076, 1661
BmeRI	GACNNNNNGTC	1 cut(s)	547
BmeT110I	CYCGRG	1 cut(s)	1404
BmgBI	CACGTC	1 cut(s)	224
BmgT120I	GGNCC	5 cut(s)	470, 869, 1076, 1496, 1661
BmiI	GGNNCC	4 cut(s)	588, 871, 1497, 1662
BmrFI	CCNGG	4 cut(s)	345, 523, 620, 726
BmsI	GCATC	4 cut(s)	304, 521, 697, 946
BoxI	GACNNNNGTC	1 cut(s)	789
BpiI	GAAGAC	1 cut(s)	1002
BpuEI	CTTGAG	1 cut(s)	609
BsaBI	GATNNNNATC	3 cut(s)	850, 1140, 1146
BsaHI	GRCGYC	1 cut(s)	643
BsaI	GGTCTC	2 cut(s)	612, 1416
BsaJI	CCNNGG	4 cut(s)	473, 618, 1405, 1633
BsaWI	WCCGGW	1 cut(s)	157
BsaXI	ACNNNNNCTCC	2 cut(s)	889, 919
Bsc4I	CCNNNNNNNGG	3 cut(s)	38, 731, 1406
Bse1I	ACTGG	3 cut(s)	257, 590, 1078
Bse21I	CCTNAGG	1 cut(s)	507
Bse8I	GATNNNNATC	3 cut(s)	850, 1140, 1146
BseBI	CCWGG	4 cut(s)	345, 523, 620, 726
BseDI	CCNNGG	4 cut(s)	473, 618, 1405, 1633
BseGI	GGATG	2 cut(s)	489, 1141
BseJI	GATNNNNATC	3 cut(s)	850, 1140, 1146
BseLI	CCNNNNNNNGG	3 cut(s)	38, 731, 1406
BseMII	CTCAG	3 cut(s)	113, 498, 975
BseNI	ACTGG	3 cut(s)	257, 590, 1078
BseRI	GAGGAG	3 cut(s)	144, 186, 1228
BseSI	GKGCMC	1 cut(s)	362
BseXI	GCAGC	5 cut(s)	202, 556, 959, 1699, 1702
BseYI	CCCAGC	1 cut(s)	1115
Bsh1236I	CGCG	1 cut(s)	1758
BshFI	GGCC	3 cut(s)	471, 505, 1498
BsiHKCI	CYCGRG	1 cut(s)	1404
BsiSI	CCGG	1 cut(s)	158
BslFI	GGGAC	5 cut(s)	263, 855, 1674, 1730, 1742
BslI	CCNNNNNNNGG	3 cut(s)	38, 731, 1406
BsmAI	GTCTC	4 cut(s)	325, 612, 964, 1416
BsmFI	GGGAC	5 cut(s)	263, 855, 1674, 1730, 1742
BsnI	GGCC	3 cut(s)	471, 505, 1498
Bso31I	GGTCTC	2 cut(s)	612, 1416
BsoBI	CYCGRG	1 cut(s)	1404
Bsp1286I	GDGCHC	2 cut(s)	362, 1122
BspACI	CCGC	2 cut(s)	584, 1347
BspANI	GGCC	3 cut(s)	471, 505, 1498
BspCNI	CTCAG	3 cut(s)	114, 499, 974
BspFNI	CGCG	1 cut(s)	1758
BspHI	TCATGA	1 cut(s)	276
BspLI	GGNNCC	4 cut(s)	588, 871, 1497, 1662
BspMAI	CTGCAG	1 cut(s)	309
BspPI	GGATC	7 cut(s)	23, 49, 134, 581, 594, 853, 1155
BspTNI	GGTCTC	2 cut(s)	612, 1416
BsrI	ACTGG	3 cut(s)	257, 590, 1078
BssECI	CCNNGG	4 cut(s)	473, 618, 1405, 1633
BssNI	GRCGYC	1 cut(s)	643
BssSI	CACGAG	2 cut(s)	1413, 1575
BssT1I	CCWWGG	1 cut(s)	473
Bst2BI	CACGAG	2 cut(s)	1413, 1575
Bst2UI	CCWGG	4 cut(s)	345, 523, 620, 726
Bst4CI	ACNGT	6 cut(s)	79, 88, 336, 863, 1319, 1634
Bst6I	CTCTTC	1 cut(s)	1349
BstACI	GRCGYC	1 cut(s)	643
BstAPI	GCANNNNNTGC	2 cut(s)	518, 566
BstC8I	GCNNGC	4 cut(s)	305, 419, 888, 892
BstDEI	CTNAG	5 cut(s)	122, 264, 507, 927, 961
BstDSI	CCRYGG	1 cut(s)	1633
BstF5I	GGATG	2 cut(s)	489, 1141
BstFNI	CGCG	1 cut(s)	1758
BstH2I	RGCGCY	1 cut(s)	424
BstHHI	GCGC	1 cut(s)	423
BstMAI	GTCTC	4 cut(s)	325, 612, 964, 1416
BstMWI	GCNNNNNNNGC	5 cut(s)	267, 366, 460, 518, 566
BstNI	CCWGG	4 cut(s)	345, 523, 620, 726
BstNSI	RCATGY	3 cut(s)	402, 454, 890
BstPAI	GACNNNNGTC	1 cut(s)	789
BstSCI	CCNGG	4 cut(s)	343, 521, 618, 724
BstSFI	CTRYAG	2 cut(s)	87, 305
BstSLI	GKGCMC	1 cut(s)	362
BstUI	CGCG	1 cut(s)	1758
BstV1I	GCAGC	5 cut(s)	202, 556, 959, 1699, 1702
BstV2I	GAAGAC	1 cut(s)	1002
BstX2I	RGATCY	5 cut(s)	139, 586, 845, 1160, 1559
BstXI	CCANNNNNNTGG	1 cut(s)	351
BstYI	RGATCY	5 cut(s)	139, 586, 845, 1160, 1559
Bsu36I	CCTNAGG	1 cut(s)	507
BsuRI	GGCC	3 cut(s)	471, 505, 1498
BtgI	CCRYGG	1 cut(s)	1633
BtrI	CACGTC	1 cut(s)	224
BtsCI	GGATG	2 cut(s)	489, 1141
BtsI	GCAGTG	1 cut(s)	314
BtsIMutI	CAGTG	3 cut(s)	314, 868, 1384
Cac8I	GCNNGC	4 cut(s)	305, 419, 888, 892
CciI	TCATGA	1 cut(s)	276
CfoI	GCGC	1 cut(s)	423
Cfr13I	GGNCC	5 cut(s)	470, 869, 1076, 1496, 1661
CseI	GACGC	2 cut(s)	311, 1764
Csp6I	GTAC	2 cut(s)	47, 1329
CviAII	CATG	6 cut(s)	277, 399, 451, 887, 1031, 1649
CviQI	GTAC	2 cut(s)	47, 1329
DdeI	CTNAG	5 cut(s)	122, 264, 507, 927, 961
DraI	TTTAAA	3 cut(s)	378, 984, 1339
DriI	GACNNNNNGTC	1 cut(s)	547
Eam1104I	CTCTTC	1 cut(s)	1349
Eam1105I	GACNNNNNGTC	1 cut(s)	547
EarI	CTCTTC	1 cut(s)	1349
Eco130I	CCWWGG	1 cut(s)	473
Eco24I	GRGCYC	1 cut(s)	1122
Eco31I	GGTCTC	2 cut(s)	612, 1416
Eco47I	GGWCC	3 cut(s)	869, 1076, 1661
Eco81I	CCTNAGG	1 cut(s)	507
Eco88I	CYCGRG	1 cut(s)	1404
EcoO109I	RGGNCCY	3 cut(s)	869, 1496, 1661
EcoRII	CCWGG	4 cut(s)	343, 521, 618, 724
EcoT14I	CCWWGG	1 cut(s)	473
EcoT22I	ATGCAT	1 cut(s)	939
EcoT38I	GRGCYC	1 cut(s)	1122
ErhI	CCWWGG	1 cut(s)	473
FaeI	CATG	6 cut(s)	280, 402, 454, 890, 1034, 1652
FalI	AAGNNNNNCTT	4 cut(s)	257, 289, 594, 626
FaqI	GGGAC	5 cut(s)	263, 855, 1674, 1730, 1742
FatI	CATG	6 cut(s)	276, 398, 450, 886, 1030, 1648
FblI	GTMKAC	2 cut(s)	148, 1753
Fnu4HI	GCNGC	5 cut(s)	191, 570, 948, 1688, 1691
FokI	GGATG	2 cut(s)	496, 1148
FriOI	GRGCYC	1 cut(s)	1122
Fsp4HI	GCNGC	5 cut(s)	191, 570, 948, 1688, 1691
FspBI	CTAG	5 cut(s)	144, 474, 480, 1044, 1145
GlaI	GCGC	1 cut(s)	422
GluI	GCNGC	5 cut(s)	191, 570, 948, 1688, 1691
GsaI	CCCAGC	1 cut(s)	1119
HaeII	RGCGCY	1 cut(s)	424
HaeIII	GGCC	3 cut(s)	471, 505, 1498
HapII	CCGG	1 cut(s)	158
HgaI	GACGC	2 cut(s)	311, 1764
HhaI	GCGC	1 cut(s)	423
Hin1I	GRCGYC	1 cut(s)	643
Hin1II	CATG	6 cut(s)	280, 402, 454, 890, 1034, 1652
Hin6I	GCGC	1 cut(s)	421
HinP1I	GCGC	1 cut(s)	421
HincII	GTYRAC	2 cut(s)	688, 1754
HindII	GTYRAC	2 cut(s)	688, 1754
HindIII	AAGCTT	1 cut(s)	1093
HinfI	GANTC	7 cut(s)	499, 548, 800, 851, 1040, 1241, 1259
HpaII	CCGG	1 cut(s)	158
HphI	GGTGA	2 cut(s)	172, 1556
Hpy166II	GTNNAC	5 cut(s)	149, 688, 1175, 1331, 1754
Hpy8I	GTNNAC	5 cut(s)	149, 688, 1175, 1331, 1754
Hpy99I	CGWCG	3 cut(s)	645, 945, 1758
HpyAV	CCTTC	3 cut(s)	596, 860, 1667
HpyCH4III	ACNGT	6 cut(s)	79, 88, 336, 863, 1319, 1634
HpyCH4IV	ACGT	3 cut(s)	223, 466, 643
HpyCH4V	TGCA	6 cut(s)	307, 369, 417, 454, 886, 937
HpyF10VI	GCNNNNNNNGC	5 cut(s)	267, 366, 460, 518, 566
HpyF3I	CTNAG	5 cut(s)	122, 264, 507, 927, 961
HpySE526I	ACGT	3 cut(s)	223, 466, 643
Hsp92I	GRCGYC	1 cut(s)	643
Hsp92II	CATG	6 cut(s)	280, 402, 454, 890, 1034, 1652
HspAI	GCGC	1 cut(s)	421
Lsp1109I	GCAGC	5 cut(s)	202, 556, 959, 1699, 1702
LweI	GCATC	4 cut(s)	304, 521, 697, 946
MaeI	CTAG	5 cut(s)	144, 474, 480, 1044, 1145
MaeII	ACGT	3 cut(s)	223, 466, 643
MaeIII	GTNAC	4 cut(s)	57, 1463, 1628, 1736
MfeI	CAATTG	1 cut(s)	822
MflI	RGATCY	5 cut(s)	139, 586, 845, 1160, 1559
MhlI	GDGCHC	2 cut(s)	362, 1122
MluI	ACGCGT	1 cut(s)	1756
MlyI	GAGTC	1 cut(s)	557
MmeI	TCCRAC	2 cut(s)	199, 762
Mph1103I	ATGCAT	1 cut(s)	939
MroXI	GAANNNNTTC	2 cut(s)	636, 1373
MseI	TTAA	8 cut(s)	81, 377, 720, 983, 1338, 1491, 1656, 1704
MslI	CAYNNNNRTG	1 cut(s)	236
MspA1I	CMGCKG	1 cut(s)	1347
MspI	CCGG	1 cut(s)	158
MspR9I	CCNGG	4 cut(s)	345, 523, 620, 726
MunI	CAATTG	1 cut(s)	822
MvaI	CCWGG	4 cut(s)	345, 523, 620, 726
MvnI	CGCG	1 cut(s)	1758
MwoI	GCNNNNNNNGC	5 cut(s)	267, 366, 460, 518, 566
NlaIII	CATG	6 cut(s)	280, 402, 454, 890, 1034, 1652
NlaIV	GGNNCC	4 cut(s)	588, 871, 1497, 1662
NmuCI	GTSAC	1 cut(s)	57
NsiI	ATGCAT	1 cut(s)	939
NspI	RCATGY	3 cut(s)	402, 454, 890
PaeI	GCATGC	1 cut(s)	890
PagI	TCATGA	1 cut(s)	276
PcsI	WCGNNNNNNNCGW	1 cut(s)	220
PdmI	GAANNNNTTC	2 cut(s)	636, 1373
PfeI	GAWTC	6 cut(s)	499, 800, 851, 1040, 1241, 1259
PfoI	TCCNGGA	1 cut(s)	343
PkrI	GCNGC	5 cut(s)	192, 571, 949, 1689, 1692
PleI	GAGTC	1 cut(s)	556
PpsI	GAGTC	1 cut(s)	556
PpuMI	RGGWCCY	2 cut(s)	869, 1661
PshAI	GACNNNNGTC	1 cut(s)	789
Psp5II	RGGWCCY	2 cut(s)	869, 1661
Psp6I	CCWGG	4 cut(s)	343, 521, 618, 724
PspFI	CCCAGC	1 cut(s)	1115
PspGI	CCWGG	4 cut(s)	343, 521, 618, 724
PspN4I	GGNNCC	4 cut(s)	588, 871, 1497, 1662
PspPI	GGNCC	5 cut(s)	470, 869, 1076, 1496, 1661
PspPPI	RGGWCCY	2 cut(s)	869, 1661
PstI	CTGCAG	1 cut(s)	309
PsuI	RGATCY	5 cut(s)	139, 586, 845, 1160, 1559
RsaI	GTAC	2 cut(s)	48, 1330
RsaNI	GTAC	2 cut(s)	47, 1329
RseI	CAYNNNNRTG	1 cut(s)	236
SalI	GTCGAC	1 cut(s)	1752
SaqAI	TTAA	8 cut(s)	81, 377, 720, 983, 1338, 1491, 1656, 1704
SatI	GCNGC	5 cut(s)	191, 570, 948, 1688, 1691
Sau96I	GGNCC	5 cut(s)	470, 869, 1076, 1496, 1661
SchI	GAGTC	1 cut(s)	557
ScrFI	CCNGG	4 cut(s)	345, 523, 620, 726
SduI	GDGCHC	2 cut(s)	362, 1122
SfaNI	GCATC	4 cut(s)	304, 521, 697, 946
SfcI	CTRYAG	2 cut(s)	87, 305
SinI	GGWCC	3 cut(s)	869, 1076, 1661
SmiI	ATTTAAAT	2 cut(s)	984, 1339
SmiMI	CAYNNNNRTG	1 cut(s)	236
SmlI	CTYRAG	1 cut(s)	624
SmoI	CTYRAG	1 cut(s)	624
SphI	GCATGC	1 cut(s)	890
SsiI	CCGC	2 cut(s)	584, 1347
SspI	AATATT	2 cut(s)	701, 1156
SspMI	CTAG	5 cut(s)	144, 474, 480, 1044, 1145
StyD4I	CCNGG	4 cut(s)	343, 521, 618, 724
StyI	CCWWGG	1 cut(s)	473
SwaI	ATTTAAAT	2 cut(s)	984, 1339
TaaI	ACNGT	6 cut(s)	79, 88, 336, 863, 1319, 1634
TaiI	ACGT	3 cut(s)	226, 469, 646
TaqI	TCGA	4 cut(s)	640, 940, 1432, 1753
TatI	WGTACW	1 cut(s)	46
TfiI	GAWTC	6 cut(s)	499, 800, 851, 1040, 1241, 1259
Tru1I	TTAA	8 cut(s)	81, 377, 720, 983, 1338, 1491, 1656, 1704
Tru9I	TTAA	8 cut(s)	81, 377, 720, 983, 1338, 1491, 1656, 1704
TscAI	CASTG	3 cut(s)	314, 868, 1384
TseFI	GTSAC	1 cut(s)	57
TseI	GCWGC	5 cut(s)	190, 569, 947, 1687, 1690
Tsp45I	GTSAC	1 cut(s)	57
TspGWI	ACGGA	1 cut(s)	83
TspRI	CASTG	3 cut(s)	314, 868, 1384
VpaK11BI	GGWCC	3 cut(s)	869, 1076, 1661
XapI	RAATTY	7 cut(s)	280, 526, 634, 985, 1222, 1427, 1486
XbaI	TCTAGA	2 cut(s)	1043, 1144
XceI	RCATGY	3 cut(s)	402, 454, 890
XmaJI	CCTAGG	1 cut(s)	473
XmiI	GTMKAC	2 cut(s)	148, 1753
XmnI	GAANNNNTTC	2 cut(s)	636, 1373
XspI	CTAG	5 cut(s)	144, 474, 480, 1044, 1145
ZraI	GACGTC	1 cut(s)	644
Zsp2I	ATGCAT	1 cut(s)	939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.