Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004280

Physical Location & Seq

Genomic Coordinates Reverse (-)

3115644 .. 3117889

Gene Structure 2246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0021700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGAGTAGGTCATCCTTCAGTGCCCTGCATGGAAAATTGGGAAGCACTGTTGAGTTGATTCTTGATGTCCCGAGCAGTAGTCTTGGCATAAGAAAAAGAAAATGGCATTCTGCTTTCATTACCATCTACTGCTCTAGAGCCGTCCTCTCTTTACGACCTTCTACTCTTCCCAAACATACCAACTCCACATTCATATCTCGCACACTCTCTTACTCCATTGTTAGCGTCGAGCCAGTCTCGGTCCCAGCCGTTAATGGATTCCAAGCAGACCAAAAAAGCCTCACTGAGCTTGTGAAGGAGAAAAATCTCAAGGAGCTCTCGGAGCTTGGAAGGGTTGAAGAAGTATCATCAGCTCTCAAAACTGATGCAGAGCATGGAATCAATGGTGATGATGCTGAAGATATTGCGCGCAGACACGACGCATTTGGTTCCAATACATACAAGAAACCGCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATCCTAATCCTCTTGGGATGTGCTGCGCTTTCTCTTGGTTTCAGCATCAAAGAAAATGGATTGAAAGAAGGTTGGATTGACGGTGGAAGCACTTGTCTTGCAGTCATTCTGGTCATTTCTTTTTCAGCCACAAGCAACTACATACAGAGCAGACAGTTTGACAAGCTGTCGAAAGTCGGCAACAATCTCAAAATTGATGCCGTGAGAAATGGAAGGCACCAACTGATTTCAATATTCGAAATTGTGGTGGGTGATGTCATCTGCTTGAAAATTGGAGATCAAGTTCCAGCTGATGGATTGCTTTTAGATGGCCATTCTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGTGACCATGTTGAGGTAAGTGTCACGGAGAATCCTTTCTTATTATCTGGGACTAAAATCGCTGATGGTTATGGTCGCATGCTTGTCACATCAGTCGGGATGAACACAAACTGGGGTGAAATGATGAGCCAAATCAGCCAAGATACCAGTGAAAAGACACCTCTGCAAGCACCTGTAGACAAGCTATCATCGTCGATGGGTAAAGGTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCCGATACTTCACAGGGAATACAGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACAAAATCTAATGACATCATAAATGCCGTTATTGGGATTGTAGCAGCTGCCGTTACAATTGTTGTGGTGGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGTTGATAACGCAATGGTGCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACTGACAAAACAGGTACTCTGACCATGAACCAGATGAAGGTGACTAAGGTTTGGTTGGGGAAAGAATGTGTGGAAGAAGAAGCTTATTCATCCATCTCTCCTTATGTTCTCGACTTGATCCAAGAAGGGGTTGCTCTTAATACAACTGGTGGTGTGTACAGGCCTAGCTTGGATTCTGAAATTGAGATCTCAGGCAGTCCAACTGAAAAGGCTATTCTTTCATGGGCGGTACATGGGTCGAACATGGATATGGAGAAAGTCGTGAAGAGTTGTAGCATTCTCCACGTTGAAGCCTTTAATTCGAAGAAGAAACAGAGTGGAGTTCTGGTGAAGAGAAAGGCTGATAACTCAGTCCATGTACACTGGAAAGGGGCAGCAGAGATGATACTAGCAATGTGCACAAGTTACTACAATGCCTCTGGAGTTGTTAAGGATATGGATACAATTGAAAAAAGGAACTTTGAGCAGATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATAGCATTCGCACATAAACAAGTTCCAGCAAAGGAGCAACTAAATGCAGACCAGAAAGTTTTGCTAAAGCAAGATGGATTGACCCTATTGGGACTTGTGGGCCTTAAAGATCCATGTCGCCCAGATGTGAGGAAAGCAGTTGAAGATTGCGAATATGCAGGGGTGAACGTCAAAATGATTACCGGAGACAATGTTTTCACCGCAAAAGCCATAGCCACTGAATGTGGGATACTCAGGCCTGGTGTAATAACTGCATTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

709

Amino Acids

76.77

Weight (kDa)

6.31

Isoelectric Point (pI)

33.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	110 - 178	4.5e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	234 - 329	3.7e-20	P-type ATPase actuator domain
Cation_ATPase	PF13246	492 - 663	7.3e-28	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004280)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19160 AT2G19160 AT4G25870 AT4G30060 AT4G30060 AT5G57270 AT5G57270 AT5G57270 AT5G57270 AT5G57270
fragaria_vesca	FvH4_4g07450 FvH4_4g07450
malus_domestica	MD13G1244200.v1.1 MD16G1251400.v1.1
prunus_persica	Prupe.1G077700_v2.0.a1 Prupe.1G077700_v2.0.a1 Prupe.1G077700_v2.0.a1
pyrus_communis	pycom13g21540 pycom16g21130
rosa_chinensis	RchiOBHm_Chr4g0399961
rosa_laevigata	RLG00000009229
rosa_roxburghii	Rroxscaffold_5G00344810
rosa_rugosa	Rorug04G0021300 Rorug04G0021400 Rorug04G0021500 Rorug04G0021600 Rorug04G0021700
rosa_samantha	Rh4AG097300 Rh4BG095000 Rh4CG106600 Rh4DG092200
rosa_wichuraiana	Rw4G008070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	717
AccB7I	CCANNNNNTGG	1 cut(s)	794
AccI	GTMKAC	2 cut(s)	1029, 1246
AccII	CGCG	1 cut(s)	409
AciI	CCGC	4 cut(s)	449, 1315, 1589, 2067
AclWI	GGATC	3 cut(s)	1351, 1474, 1970
AcoI	YGGCCR	1 cut(s)	811
AcuI	CTGAAG	1 cut(s)	417
AfaI	GTAC	6 cut(s)	1148, 1363, 1378, 1520, 1593, 1722
AfiI	CCNNNNNNNGG	6 cut(s)	458, 794, 865, 1194, 1399, 1489
AgsI	TTSAA	9 cut(s)	338, 490, 565, 732, 769, 1652, 1811, 1838, 2009
AhdI	GACNNNNNGTC	1 cut(s)	667
AjnI	CCWGG	1 cut(s)	2104
AjuI	GAANNNNNNNTTGG	2 cut(s)	173, 205
AloI	GAACNNNNNNTCC	2 cut(s)	768, 800
Alw21I	GWGCWC	2 cut(s)	318, 1763
Alw26I	GTCTC	3 cut(s)	241, 1328, 2046
Alw44I	GTGCAC	1 cut(s)	1759
AlwI	GGATC	3 cut(s)	1351, 1474, 1970
Ama87I	CYCGRG	1 cut(s)	70
AoxI	GGCC	4 cut(s)	811, 1523, 1966, 2102
ApaLI	GTGCAC	1 cut(s)	1759
ApeKI	GCWGC	7 cut(s)	524, 1155, 1205, 1208, 1736, 1847, 1854
Asp700I	GAANNNNTTC	1 cut(s)	887
AspLEI	GCGC	3 cut(s)	409, 411, 529
AspS9I	GGNCC	3 cut(s)	241, 1099, 1966
AsuHPI	GGTGA	7 cut(s)	398, 764, 980, 1414, 1702, 2041, 2056
AsuII	TTCGAA	2 cut(s)	738, 1664
AsuNHI	GCTAGC	1 cut(s)	1850
AvaI	CYCGRG	1 cut(s)	70
AvaII	GGWCC	2 cut(s)	241, 1099
BaeGI	GKGCMC	2 cut(s)	25, 1763
BaeI	ACNNNNGTAYC	2 cut(s)	1583, 1616
BalI	TGGCCA	1 cut(s)	813
BanI	GGYRCC	1 cut(s)	717
BanII	GRGCYC	1 cut(s)	318
Bbv12I	GWGCWC	2 cut(s)	318, 1763
BbvI	GCAGC	7 cut(s)	511, 1167, 1195, 1217, 1748, 1859, 1866
BccI	CCATC	8 cut(s)	131, 788, 803, 911, 1042, 1288, 1463, 1934
BceAI	ACGGC	5 cut(s)	125, 233, 686, 1172, 1196
BcgI	CGANNNNNNTGC	2 cut(s)	1855, 1889
BciT130I	CCWGG	1 cut(s)	2106
BciVI	GTATCC	2 cut(s)	1795, 2088
BcoDI	GTCTC	3 cut(s)	241, 1328, 2046
BfaI	CTAG	4 cut(s)	135, 1527, 1751, 1851
BfmI	CTRYAG	1 cut(s)	1026
BfuI	GTATCC	2 cut(s)	1795, 2088
BglII	AGATCT	1 cut(s)	1548
BisI	GCNGC	7 cut(s)	525, 1156, 1206, 1209, 1737, 1848, 1855
BlsI	GCNGC	7 cut(s)	526, 1157, 1207, 1210, 1738, 1849, 1856
Bme1390I	CCNGG	1 cut(s)	2106
Bme18I	GGWCC	2 cut(s)	241, 1099
BmeRI	GACNNNNNGTC	1 cut(s)	667
BmeT110I	CYCGRG	1 cut(s)	70
BmgT120I	GGNCC	3 cut(s)	241, 1099, 1966
BmiI	GGNNCC	3 cut(s)	243, 430, 719
BmrFI	CCNGG	1 cut(s)	2106
BmrI	ACTGGG	1 cut(s)	973
BmsI	GCATC	5 cut(s)	355, 382, 555, 688, 1853
BmtI	GCTAGC	1 cut(s)	1854
BmuI	ACTGGG	1 cut(s)	973
BplI	GAGNNNNNCTC	4 cut(s)	129, 161, 221, 253
BpmI	CTGGAG	1 cut(s)	1803
Bpu14I	TTCGAA	2 cut(s)	738, 1664
BpuEI	CTTGAG	1 cut(s)	293
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	1 cut(s)	1338
BsaWI	WCCGGW	1 cut(s)	2048
BsaXI	ACNNNNNCTCC	6 cut(s)	768, 798, 1674, 1704, 2043, 2073
Bsc4I	CCNNNNNNNGG	6 cut(s)	458, 794, 865, 1194, 1399, 1489
Bse1I	ACTGG	5 cut(s)	233, 968, 999, 1513, 1730
Bse3DI	GCAATG	2 cut(s)	1314, 1761
BseBI	CCWGG	1 cut(s)	2106
BseDI	CCNNGG	1 cut(s)	1338
BseGI	GGATG	5 cut(s)	11, 524, 957, 1132, 1451
BseLI	CCNNNNNNNGG	6 cut(s)	458, 794, 865, 1194, 1399, 1489
BseMI	GCAATG	2 cut(s)	1314, 1761
BseMII	CTCAG	5 cut(s)	276, 1566, 1725, 1873, 2113
BseNI	ACTGG	5 cut(s)	233, 968, 999, 1513, 1730
BsePI	GCGCGC	1 cut(s)	407
BseSI	GKGCMC	2 cut(s)	25, 1763
BseXI	GCAGC	7 cut(s)	511, 1167, 1195, 1217, 1748, 1859, 1866
BseYI	CCCAGC	1 cut(s)	244
Bsh1236I	CGCG	1 cut(s)	409
BshFI	GGCC	4 cut(s)	813, 1525, 1968, 2104
BshNI	GGYRCC	1 cut(s)	717
BsiHKAI	GWGCWC	2 cut(s)	318, 1763
BsiHKCI	CYCGRG	1 cut(s)	70
BsiSI	CCGG	1 cut(s)	2049
BslFI	GGGAC	4 cut(s)	53, 227, 916, 1971
BslI	CCNNNNNNNGG	6 cut(s)	458, 794, 865, 1194, 1399, 1489
BsmAI	GTCTC	3 cut(s)	241, 1328, 2046
BsmFI	GGGAC	4 cut(s)	53, 227, 916, 1971
BsmI	GAATGC	3 cut(s)	106, 1638, 1871
BsnI	GGCC	4 cut(s)	813, 1525, 1968, 2104
Bso31I	GGTCTC	1 cut(s)	1328
BsoBI	CYCGRG	1 cut(s)	70
Bsp119I	TTCGAA	2 cut(s)	738, 1664
Bsp1286I	GDGCHC	3 cut(s)	25, 318, 1763
Bsp1407I	TGTACA	2 cut(s)	1518, 1720
Bsp143I	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
Bsp19I	CCATGG	1 cut(s)	1338
BspACI	CCGC	4 cut(s)	449, 1315, 1589, 2067
BspANI	GGCC	4 cut(s)	813, 1525, 1968, 2104
BspCNI	CTCAG	5 cut(s)	277, 1565, 1724, 1872, 2112
BspFNI	CGCG	1 cut(s)	409
BspLI	GGNNCC	3 cut(s)	243, 430, 719
BspOI	GCTAGC	1 cut(s)	1854
BspPI	GGATC	3 cut(s)	1351, 1474, 1970
BspT104I	TTCGAA	2 cut(s)	738, 1664
BspT107I	GGYRCC	1 cut(s)	717
BspTNI	GGTCTC	1 cut(s)	1328
BsrDI	GCAATG	2 cut(s)	1314, 1761
BsrGI	TGTACA	2 cut(s)	1518, 1720
BsrI	ACTGG	5 cut(s)	233, 968, 999, 1513, 1730
BssECI	CCNNGG	1 cut(s)	1338
BssHII	GCGCGC	1 cut(s)	407
BssMI	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
BssT1I	CCWWGG	1 cut(s)	1338
Bst2UI	CCWGG	1 cut(s)	2106
Bst4CI	ACNGT	3 cut(s)	49, 584, 657
Bst6I	CTCTTC	4 cut(s)	171, 1280, 1622, 1688
BstAUI	TGTACA	2 cut(s)	1518, 1720
BstBI	TTCGAA	2 cut(s)	738, 1664
BstC8I	GCNNGC	4 cut(s)	409, 932, 1020, 1852
BstDEI	CTNAG	6 cut(s)	285, 1407, 1552, 1711, 1859, 2099
BstDSI	CCRYGG	1 cut(s)	1338
BstF5I	GGATG	5 cut(s)	11, 524, 957, 1132, 1451
BstFNI	CGCG	1 cut(s)	409
BstHHI	GCGC	3 cut(s)	409, 411, 529
BstKTI	GATC	5 cut(s)	781, 1346, 1482, 1551, 1978
BstMAI	GTCTC	3 cut(s)	241, 1328, 2046
BstMBI	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
BstMWI	GCNNNNNNNGC	3 cut(s)	322, 987, 1863
BstNI	CCWGG	1 cut(s)	2106
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	1 cut(s)	2104
BstSFI	CTRYAG	1 cut(s)	1026
BstSLI	GKGCMC	2 cut(s)	25, 1763
BstUI	CGCG	1 cut(s)	409
BstV1I	GCAGC	7 cut(s)	511, 1167, 1195, 1217, 1748, 1859, 1866
BstX2I	RGATCY	3 cut(s)	1343, 1548, 1975
BstYI	RGATCY	3 cut(s)	1343, 1548, 1975
BsuI	GTATCC	2 cut(s)	1795, 2088
BsuRI	GGCC	4 cut(s)	813, 1525, 1968, 2104
BtgI	CCRYGG	1 cut(s)	1338
BtsCI	GGATG	5 cut(s)	11, 524, 957, 1132, 1451
BtsIMutI	CAGTG	6 cut(s)	25, 45, 282, 1006, 1723, 2082
Cac8I	GCNNGC	4 cut(s)	409, 932, 1020, 1852
CfoI	GCGC	3 cut(s)	409, 411, 529
Cfr13I	GGNCC	3 cut(s)	241, 1099, 1966
CseI	GACGC	2 cut(s)	214, 428
Csp6I	GTAC	6 cut(s)	1147, 1362, 1377, 1519, 1592, 1721
CspCI	CAANNNNNGTGG	2 cut(s)	1206, 1241
CviQI	GTAC	6 cut(s)	1147, 1362, 1377, 1519, 1592, 1721
DdeI	CTNAG	6 cut(s)	285, 1407, 1552, 1711, 1859, 2099
DpnI	GATC	5 cut(s)	780, 1345, 1481, 1550, 1977
DpnII	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
DriI	GACNNNNNGTC	1 cut(s)	667
EaeI	YGGCCR	1 cut(s)	811
Eam1104I	CTCTTC	4 cut(s)	171, 1280, 1622, 1688
Eam1105I	GACNNNNNGTC	1 cut(s)	667
EarI	CTCTTC	4 cut(s)	171, 1280, 1622, 1688
Ecl136II	GAGCTC	1 cut(s)	316
Eco130I	CCWWGG	1 cut(s)	1338
Eco147I	AGGCCT	2 cut(s)	1525, 2104
Eco24I	GRGCYC	1 cut(s)	318
Eco31I	GGTCTC	1 cut(s)	1328
Eco47I	GGWCC	2 cut(s)	241, 1099
Eco53kI	GAGCTC	1 cut(s)	316
Eco57I	CTGAAG	1 cut(s)	417
Eco88I	CYCGRG	1 cut(s)	70
EcoICRI	GAGCTC	1 cut(s)	316
EcoRII	CCWGG	1 cut(s)	2104
EcoT14I	CCWWGG	1 cut(s)	1338
EcoT22I	ATGCAT	1 cut(s)	1868
EcoT38I	GRGCYC	1 cut(s)	318
ErhI	CCWWGG	1 cut(s)	1338
FaqI	GGGAC	4 cut(s)	53, 227, 916, 1971
FblI	GTMKAC	2 cut(s)	1029, 1246
Fnu4HI	GCNGC	7 cut(s)	525, 1156, 1206, 1209, 1737, 1848, 1855
FokI	GGATG	4 cut(s)	531, 964, 1139, 1438
FriOI	GRGCYC	1 cut(s)	318
Fsp4HI	GCNGC	7 cut(s)	525, 1156, 1206, 1209, 1737, 1848, 1855
FspBI	CTAG	4 cut(s)	135, 1527, 1751, 1851
GlaI	GCGC	3 cut(s)	408, 410, 528
GluI	GCNGC	7 cut(s)	525, 1156, 1206, 1209, 1737, 1848, 1855
GsaI	CCCAGC	1 cut(s)	248
GsuI	CTGGAG	1 cut(s)	1803
HaeIII	GGCC	4 cut(s)	813, 1525, 1968, 2104
HapII	CCGG	1 cut(s)	2049
HgaI	GACGC	2 cut(s)	214, 428
HhaI	GCGC	3 cut(s)	409, 411, 529
Hin6I	GCGC	3 cut(s)	407, 409, 527
HinP1I	GCGC	3 cut(s)	407, 409, 527
HindIII	AAGCTT	1 cut(s)	1443
HinfI	GANTC	8 cut(s)	58, 258, 378, 462, 833, 883, 1261, 1535
HpaII	CCGG	1 cut(s)	2049
HphI	GGTGA	7 cut(s)	398, 764, 980, 1414, 1702, 2041, 2056
Hpy166II	GTNNAC	6 cut(s)	1030, 1247, 1519, 1723, 1761, 2032
Hpy188I	TCNGA	5 cut(s)	322, 1103, 1383, 1540, 1862
Hpy188III	TCNNGA	8 cut(s)	62, 70, 135, 949, 1238, 1472, 1624, 1782
Hpy8I	GTNNAC	6 cut(s)	1030, 1247, 1519, 1723, 1761, 2032
Hpy99I	CGWCG	3 cut(s)	230, 422, 1048
HpyCH4III	ACNGT	3 cut(s)	49, 584, 657
HpyCH4IV	ACGT	2 cut(s)	1647, 2034
HpyCH4V	TGCA	9 cut(s)	28, 368, 602, 1018, 1761, 1866, 1913, 2024, 2120
HpyF10VI	GCNNNNNNNGC	3 cut(s)	322, 987, 1863
HpyF3I	CTNAG	6 cut(s)	285, 1407, 1552, 1711, 1859, 2099
HpySE526I	ACGT	2 cut(s)	1647, 2034
HspAI	GCGC	3 cut(s)	407, 409, 527
Kzo9I	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
LmnI	GCTCC	3 cut(s)	313, 322, 1900
Lsp1109I	GCAGC	7 cut(s)	511, 1167, 1195, 1217, 1748, 1859, 1866
LweI	GCATC	5 cut(s)	355, 382, 555, 688, 1853
MaeI	CTAG	4 cut(s)	135, 1527, 1751, 1851
MaeII	ACGT	2 cut(s)	1647, 2034
MaeIII	GTNAC	7 cut(s)	854, 874, 937, 1213, 1258, 1402, 1766
MalI	GATC	5 cut(s)	780, 1345, 1481, 1550, 1977
MboI	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
MfeI	CAATTG	2 cut(s)	1218, 1806
MflI	RGATCY	3 cut(s)	1343, 1548, 1975
MhlI	GDGCHC	3 cut(s)	25, 318, 1763
MlsI	TGGCCA	1 cut(s)	813
MluNI	TGGCCA	1 cut(s)	813
MlyI	GAGTC	1 cut(s)	1255
MmeI	TCCRAC	2 cut(s)	554, 1586
Mox20I	TGGCCA	1 cut(s)	813
Mph1103I	ATGCAT	1 cut(s)	1868
MroXI	GAANNNNTTC	1 cut(s)	887
MscI	TGGCCA	1 cut(s)	813
MseI	TTAA	6 cut(s)	252, 1500, 1659, 1791, 1971, 2128
MslI	CAYNNNNRTG	1 cut(s)	1610
Msp20I	TGGCCA	1 cut(s)	813
MspA1I	CMGCKG	2 cut(s)	791, 1208
MspI	CCGG	1 cut(s)	2049
MspR9I	CCNGG	1 cut(s)	2106
MunI	CAATTG	2 cut(s)	1218, 1806
Mva1269I	GAATGC	3 cut(s)	106, 1638, 1871
MvaI	CCWGG	1 cut(s)	2106
MvnI	CGCG	1 cut(s)	409
MwoI	GCNNNNNNNGC	3 cut(s)	322, 987, 1863
NcoI	CCATGG	1 cut(s)	1338
NdeII	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
NheI	GCTAGC	1 cut(s)	1850
NlaIV	GGNNCC	3 cut(s)	243, 430, 719
NmuCI	GTSAC	5 cut(s)	854, 874, 937, 1258, 1402
NsiI	ATGCAT	1 cut(s)	1868
NspI	RCATGY	1 cut(s)	934
NspV	TTCGAA	2 cut(s)	738, 1664
PaeI	GCATGC	1 cut(s)	934
PauI	GCGCGC	1 cut(s)	407
PceI	AGGCCT	2 cut(s)	1525, 2104
PctI	GAATGC	3 cut(s)	106, 1638, 1871
PdmI	GAANNNNTTC	1 cut(s)	887
PfeI	GAWTC	7 cut(s)	58, 258, 378, 462, 833, 883, 1535
PflMI	CCANNNNNTGG	1 cut(s)	794
PkrI	GCNGC	7 cut(s)	526, 1157, 1207, 1210, 1738, 1849, 1856
PleI	GAGTC	1 cut(s)	1255
PpsI	GAGTC	1 cut(s)	1255
Psp124BI	GAGCTC	1 cut(s)	318
Psp6I	CCWGG	1 cut(s)	2104
PspFI	CCCAGC	1 cut(s)	244
PspGI	CCWGG	1 cut(s)	2104
PspN4I	GGNNCC	3 cut(s)	243, 430, 719
PspPI	GGNCC	3 cut(s)	241, 1099, 1966
PsuI	RGATCY	3 cut(s)	1343, 1548, 1975
PteI	GCGCGC	1 cut(s)	407
PvuII	CAGCTG	2 cut(s)	791, 1208
RsaI	GTAC	6 cut(s)	1148, 1363, 1378, 1520, 1593, 1722
RsaNI	GTAC	6 cut(s)	1147, 1362, 1377, 1519, 1592, 1721
RseI	CAYNNNNRTG	1 cut(s)	1610
SacI	GAGCTC	1 cut(s)	318
SaqAI	TTAA	6 cut(s)	252, 1500, 1659, 1791, 1971, 2128
SatI	GCNGC	7 cut(s)	525, 1156, 1206, 1209, 1737, 1848, 1855
Sau3AI	GATC	5 cut(s)	778, 1343, 1479, 1548, 1975
Sau96I	GGNCC	3 cut(s)	241, 1099, 1966
SchI	GAGTC	1 cut(s)	1255
ScrFI	CCNGG	1 cut(s)	2106
SduI	GDGCHC	3 cut(s)	25, 318, 1763
SfaNI	GCATC	5 cut(s)	355, 382, 555, 688, 1853
SfcI	CTRYAG	1 cut(s)	1026
SfuI	TTCGAA	2 cut(s)	738, 1664
SinI	GGWCC	2 cut(s)	241, 1099
SmiMI	CAYNNNNRTG	1 cut(s)	1610
SmlI	CTYRAG	1 cut(s)	308
SmoI	CTYRAG	1 cut(s)	308
SphI	GCATGC	1 cut(s)	934
SseBI	AGGCCT	2 cut(s)	1525, 2104
SsiI	CCGC	4 cut(s)	449, 1315, 1589, 2067
SspI	AATATT	1 cut(s)	735
SspMI	CTAG	4 cut(s)	135, 1527, 1751, 1851
SstI	GAGCTC	1 cut(s)	318
StuI	AGGCCT	2 cut(s)	1525, 2104
StyD4I	CCNGG	1 cut(s)	2104
StyI	CCWWGG	1 cut(s)	1338
TaaI	ACNGT	3 cut(s)	49, 584, 657
TaiI	ACGT	2 cut(s)	1650, 2037
TaqI	TCGA	7 cut(s)	228, 671, 738, 1046, 1473, 1601, 1664
TaqII	GACCGA	1 cut(s)	229
TatI	WGTACW	4 cut(s)	1146, 1361, 1518, 1720
TfiI	GAWTC	7 cut(s)	58, 258, 378, 462, 833, 883, 1535
Tru1I	TTAA	6 cut(s)	252, 1500, 1659, 1791, 1971, 2128
Tru9I	TTAA	6 cut(s)	252, 1500, 1659, 1791, 1971, 2128
TscAI	CASTG	6 cut(s)	25, 52, 289, 1006, 1730, 2089
TseFI	GTSAC	5 cut(s)	854, 874, 937, 1258, 1402
TseI	GCWGC	7 cut(s)	524, 1155, 1205, 1208, 1736, 1847, 1854
Tsp45I	GTSAC	5 cut(s)	854, 874, 937, 1258, 1402
TspDTI	ATGAA	9 cut(s)	106, 181, 846, 968, 1298, 1403, 1412, 1440, 1572
TspGWI	ACGGA	1 cut(s)	893
TspRI	CASTG	6 cut(s)	25, 52, 289, 1006, 1730, 2089
Van91I	CCANNNNNTGG	1 cut(s)	794
VneI	GTGCAC	1 cut(s)	1759
VpaK11BI	GGWCC	2 cut(s)	241, 1099
XbaI	TCTAGA	1 cut(s)	134
XceI	RCATGY	1 cut(s)	934
XmiI	GTMKAC	2 cut(s)	1029, 1246
XmnI	GAANNNNTTC	1 cut(s)	887
XspI	CTAG	4 cut(s)	135, 1527, 1751, 1851
Zsp2I	ATGCAT	1 cut(s)	1868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.