Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004772

Physical Location & Seq

Genomic Coordinates Reverse (-)

54002817 .. 54004604

Gene Structure 1788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0368700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGAACACTTTTATACCAAACCAAAACGCGTCACTCACTAGTCTCACTTTGGTCCTCACTCCCTTCTCGACAATGGTCTCACTCTCCCAACTCCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAACCCTCTGCAACTCCCAACACTACCTCCAACTCCCGCTTCTCCACACAGACCCCTTCCCCACACCCTCCCAAGCCCTCTCTCTCGACACCCACCGCCTCTCTCTCCTCCACAACCGCCGCCGCCGTTCCGCCACCTCCCCCGTCGTCTCCGGCGCCTCCACCGGCTCCGGCCAGTACTTCGTCCACCTCCGCCTCGGCTCTCCCCCCCAGAGCCTCCTCCTCGTCGCCGACACCGGCAGCGATCTCGTCTGGCTCCGCTGCTCCGCCTGCAAAAACTGCTCCAATCGGAGCCCCGGCTCCGCTTTCCTCGCCCGCCACTCCACCACATTCTCACCCTACCACTGCTACGACTCCGCCTGCGACCTCGTCCCCCGACCCGACCCGAGTCCGTGTAACCATACCCGGCTCCACAGCCCCTGTCGCTACGAGTATTCCTACTCCGACGGATCCAGAACCGCCGGCTTCTTCTCCAGAGAAACCACCACTCTAAACACCAGCTCCGGGACACCGGCGAAGCTCTCTGACTTGGAGTTCGGGTGCGGGTTTGATGTTTCGGGTCCGAGCTTAACCGGGCCGAGTCTCGGCGGGGCCCACGGCGTCATGGGCCTGGGAAGAGGCCCAATCTCGTTTGCCTCGCAGCTGGGTCGCCGCTTCGGGAACAAATTCTCCTACTGTCTACTGGACTACACCCTATCGCCGCCGCCGACGAGTTACCTCAGGATCGGAGCCTCCAAATCCGACGTCGTTTCGAAACTGAGCTTCACACGCTTGCTGCTCAACCCTCTCTCCCCTACATTTTACTACATTGGGATCAAGTACGTCTCCGTCAACGGCGTTAAATTACCGGTTCGCCCCTCCGTTTGGTCCCTCGACGAGCTCGGTAACGGCGGCACGGTGATCGACTCGGGGACGACGTTAACTTTCTTGCCCGAGCCGGCTTACCGTCTAATCCTGGCGGCGTTTAAACGGAGCTTGAAGAAGCTGGCTAGCCCAGCCCAGCCGACTCCGGGGTTCGATCTCTGTGTCAACGTGTCGGGTTTAGCGCGGGCGAGACTACCAAAGCTGAGTTTCGGACTCGCGGGTGGCTCGGTTTTCGCGCCGCCGCCGGGGAACTATTTCATTCAGACGATGGATCGGGTCGAGTGCTTGGCGATCCAGCCCGTTGATTCCGTGTCTGGCTTTTCGGTGATAGGGAATCTTATGCAACAAGGATTCTTGTTTGAGTTTGACAAGGACCGCTCGCGGCTCGGTTTTTCACGTCATGGCTGCGCGCTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3755

Protein Analysis

469

Amino Acids

51.03

Weight (kDa)

9.29

Isoelectric Point (pI)

52.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	101 - 154	4.5e-06	Eukaryotic aspartyl protease
TAXi_N	PF14543	102 - 285	2.6e-45	Xylanase inhibitor N-terminal
TAXi_C	PF14541	310 - 462	4.1e-33	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10820 AT1G10820 AT1G60670 AT1G60670 AT1G60670 AT1G60670 AT1G60670 AT1G68160
fragaria_vesca	FvH4_4g36480 FvH4_4g36480
malus_domestica	MD13G1008900.v1.1 MD16G1006900.v1.1
prunus_persica	Prupe.1G343800_v2.0.a1 Prupe.1G343800_v2.0.a1 Prupe.1G343800_v2.0.a1
pyrus_communis	pycom13g00750
rosa_chinensis	RchiOBHm_Chr4g0446241
rosa_laevigata	RLG00000005678
rosa_multiflora	Rmu_sc0002266.1_g000010 Rmu_sc0014728.1_g000006
rosa_roxburghii	Rroxscaffold_5G00386640
rosa_rugosa	Rorug04G0368500 Rorug04G0368600 Rorug04G0368600 Rorug04G0368700 Rorug04G0368800
rosa_samantha	Rh4AG430900 Rh4BG440300 Rh4CG457600 Rh4DG438800
rosa_wichuraiana	Rw4G036810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	873
AccB1I	GGYRCC	1 cut(s)	281
AccBSI	CCGCTC	1 cut(s)	1368
AccI	GTMKAC	1 cut(s)	805
AccII	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
AclWI	GGATC	6 cut(s)	570, 583, 857, 947, 1269, 1276
AcoI	YGGCCR	1 cut(s)	298
AcsI	RAATTY	1 cut(s)	791
AcuI	CTGAAG	1 cut(s)	1388
AcyI	GRCGYC	3 cut(s)	282, 726, 870
AfaI	GTAC	2 cut(s)	305, 947
AfiI	CCNNNNNNNGG	5 cut(s)	630, 710, 990, 1136, 1235
AflIII	ACRYGT	2 cut(s)	27, 1158
AgeI	ACCGGT	1 cut(s)	973
AgsI	TTSAA	1 cut(s)	1105
AhlI	ACTAGT	1 cut(s)	38
AjiI	CACGTC	1 cut(s)	1388
AjnI	CCWGG	2 cut(s)	735, 1080
AjuI	GAANNNNNNNTTGG	2 cut(s)	150, 182
AloI	GAACNNNNNNTCC	2 cut(s)	779, 811
AluBI	AGCT	9 cut(s)	627, 646, 693, 769, 888, 1006, 1101, 1111, 1192
AluI	AGCT	9 cut(s)	627, 646, 693, 769, 888, 1006, 1101, 1111, 1192
Alw21I	GWGCWC	1 cut(s)	1008
Alw26I	GTCTC	6 cut(s)	47, 82, 280, 713, 955, 1174
AlwI	GGATC	6 cut(s)	570, 583, 857, 947, 1269, 1276
AlwNI	CAGNNNCTG	1 cut(s)	546
Ama87I	CYCGRG	3 cut(s)	511, 1033, 1058
AoxI	GGCC	5 cut(s)	298, 701, 717, 733, 745
ApaI	GGGCCC	1 cut(s)	721
ApeKI	GCWGC	5 cut(s)	366, 387, 766, 901, 1395
ApoI	RAATTY	1 cut(s)	791
ArsI	GACNNNNNNTTYG	4 cut(s)	644, 676, 855, 887
AsiGI	ACCGGT	1 cut(s)	973
Asp700I	GAANNNNTTC	2 cut(s)	791, 1244
AspLEI	GCGC	5 cut(s)	284, 1174, 1228, 1400, 1402
AspS9I	GGNCC	9 cut(s)	52, 686, 701, 717, 718, 733, 746, 993, 1363
AsuC2I	CCSGG	6 cut(s)	423, 532, 631, 700, 1137, 1236
AsuHPI	GGTGA	3 cut(s)	453, 1036, 1327
AsuII	TTCGAA	1 cut(s)	878
AsuNHI	GCTAGC	1 cut(s)	1115
AvaI	CYCGRG	3 cut(s)	511, 1033, 1058
AvaII	GGWCC	4 cut(s)	52, 686, 993, 1363
AxyI	CCTNAGG	1 cut(s)	845
BaeGI	GKGCMC	1 cut(s)	721
BamHI	GGATCC	1 cut(s)	575
BanI	GGYRCC	1 cut(s)	281
BanII	GRGCYC	3 cut(s)	422, 721, 1008
Bbv12I	GWGCWC	1 cut(s)	1008
BbvI	GCAGC	5 cut(s)	374, 378, 778, 888, 1382
BccI	CCATC	1 cut(s)	1252
BceAI	ACGGC	4 cut(s)	237, 739, 976, 1030
BcgI	CGANNNNNNTGC	6 cut(s)	355, 389, 755, 789, 1009, 1043
BciT130I	CCWGG	2 cut(s)	737, 1082
BcnI	CCSGG	6 cut(s)	423, 532, 631, 700, 1137, 1236
BcoDI	GTCTC	6 cut(s)	47, 82, 280, 713, 955, 1174
BcuI	ACTAGT	1 cut(s)	38
BfaI	CTAG	2 cut(s)	39, 1116
BfoI	RGCGCY	1 cut(s)	285
BmcAI	AGTACT	1 cut(s)	305
Bme1390I	CCNGG	8 cut(s)	423, 532, 631, 700, 737, 1082, 1137, 1236
Bme18I	GGWCC	4 cut(s)	52, 686, 993, 1363
BmeT110I	CYCGRG	3 cut(s)	511, 1033, 1058
BmgBI	CACGTC	1 cut(s)	1388
BmgT120I	GGNCC	9 cut(s)	52, 686, 701, 717, 718, 733, 746, 993, 1363
BmrFI	CCNGG	8 cut(s)	423, 532, 631, 700, 737, 1082, 1137, 1236
BmtI	GCTAGC	1 cut(s)	1119
BoxI	GACNNNNGTC	2 cut(s)	74, 513
BpmI	CTGGAG	1 cut(s)	583
Bpu14I	TTCGAA	1 cut(s)	878
BpuMI	CCSGG	6 cut(s)	423, 532, 631, 700, 1137, 1236
BsaHI	GRCGYC	3 cut(s)	282, 726, 870
BsaI	GGTCTC	1 cut(s)	82
BsaJI	CCNNGG	6 cut(s)	322, 421, 721, 736, 1136, 1235
BsaWI	WCCGGW	1 cut(s)	973
Bsc4I	CCNNNNNNNGG	5 cut(s)	630, 710, 990, 1136, 1235
Bse118I	RCCGGY	6 cut(s)	290, 362, 587, 637, 973, 1063
Bse1I	ACTGG	2 cut(s)	301, 813
Bse21I	CCTNAGG	1 cut(s)	845
BseBI	CCWGG	2 cut(s)	737, 1082
BseDI	CCNNGG	6 cut(s)	322, 421, 721, 736, 1136, 1235
BseLI	CCNNNNNNNGG	5 cut(s)	630, 710, 990, 1136, 1235
BseMII	CTCAG	3 cut(s)	859, 875, 1184
BseNI	ACTGG	2 cut(s)	301, 813
BsePI	GCGCGC	1 cut(s)	1398
BseRI	GAGGAG	3 cut(s)	224, 335, 338
BseSI	GKGCMC	1 cut(s)	721
BseXI	GCAGC	5 cut(s)	374, 378, 778, 888, 1382
BseYI	CCCAGC	3 cut(s)	769, 1120, 1125
Bsh1236I	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
BshFI	GGCC	5 cut(s)	300, 703, 719, 735, 747
BshNI	GGYRCC	1 cut(s)	281
BshTI	ACCGGT	1 cut(s)	973
BsiHKAI	GWGCWC	1 cut(s)	1008
BsiHKCI	CYCGRG	3 cut(s)	511, 1033, 1058
BslFI	GGGAC	4 cut(s)	482, 646, 979, 1051
BslI	CCNNNNNNNGG	5 cut(s)	630, 710, 990, 1136, 1235
BsmAI	GTCTC	6 cut(s)	47, 82, 280, 713, 955, 1174
BsmBI	CGTCTC	2 cut(s)	280, 955
BsmFI	GGGAC	4 cut(s)	482, 646, 979, 1051
BsnI	GGCC	5 cut(s)	300, 703, 719, 735, 747
Bso31I	GGTCTC	1 cut(s)	82
BsoBI	CYCGRG	3 cut(s)	511, 1033, 1058
Bsp119I	TTCGAA	1 cut(s)	878
Bsp120I	GGGCCC	1 cut(s)	717
Bsp1286I	GDGCHC	3 cut(s)	422, 721, 1008
Bsp143I	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
BspANI	GGCC	5 cut(s)	300, 703, 719, 735, 747
BspCNI	CTCAG	3 cut(s)	858, 876, 1185
BspFNI	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
BspOI	GCTAGC	1 cut(s)	1119
BspPI	GGATC	6 cut(s)	570, 583, 857, 947, 1269, 1276
BspT104I	TTCGAA	1 cut(s)	878
BspT107I	GGYRCC	1 cut(s)	281
BspTNI	GGTCTC	1 cut(s)	82
BsrBI	CCGCTC	1 cut(s)	1368
BsrFI	RCCGGY	6 cut(s)	290, 362, 587, 637, 973, 1063
BsrI	ACTGG	2 cut(s)	301, 813
BssAI	RCCGGY	6 cut(s)	290, 362, 587, 637, 973, 1063
BssECI	CCNNGG	6 cut(s)	322, 421, 721, 736, 1136, 1235
BssHII	GCGCGC	1 cut(s)	1398
BssMI	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
BssNI	GRCGYC	3 cut(s)	282, 726, 870
Bst2UI	CCWGG	2 cut(s)	737, 1082
Bst4CI	ACNGT	3 cut(s)	803, 1024, 1073
Bst6I	CTCTTC	1 cut(s)	736
BstACI	GRCGYC	3 cut(s)	282, 726, 870
BstAPI	GCANNNNNTGC	1 cut(s)	405
BstBI	TTCGAA	1 cut(s)	878
BstDEI	CTNAG	3 cut(s)	845, 884, 1193
BstDSI	CCRYGG	1 cut(s)	721
BstFNI	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
BstH2I	RGCGCY	1 cut(s)	285
BstHHI	GCGC	5 cut(s)	284, 1174, 1228, 1400, 1402
BstKTI	GATC	8 cut(s)	373, 578, 852, 942, 1029, 1147, 1264, 1284
BstMAI	GTCTC	6 cut(s)	47, 82, 280, 713, 955, 1174
BstMBI	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
BstMWI	GCNNNNNNNGC	7 cut(s)	396, 405, 437, 549, 732, 894, 1121
BstNI	CCWGG	2 cut(s)	737, 1082
BstPAI	GACNNNNGTC	2 cut(s)	74, 513
BstSCI	CCNGG	8 cut(s)	421, 530, 629, 698, 735, 1080, 1135, 1234
BstSLI	GKGCMC	1 cut(s)	721
BstUI	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
BstV1I	GCAGC	5 cut(s)	374, 378, 778, 888, 1382
BstX2I	RGATCY	1 cut(s)	575
BstYI	RGATCY	1 cut(s)	575
Bsu36I	CCTNAGG	1 cut(s)	845
BsuRI	GGCC	5 cut(s)	300, 703, 719, 735, 747
BtgI	CCRYGG	1 cut(s)	721
BtrI	CACGTC	1 cut(s)	1388
BtsI	GCAGTG	1 cut(s)	469
BtsIMutI	CAGTG	1 cut(s)	469
CaiI	CAGNNNCTG	1 cut(s)	546
CfoI	GCGC	5 cut(s)	284, 1174, 1228, 1400, 1402
Cfr10I	RCCGGY	6 cut(s)	290, 362, 587, 637, 973, 1063
Cfr13I	GGNCC	9 cut(s)	52, 686, 701, 717, 718, 733, 746, 993, 1363
CseI	GACGC	2 cut(s)	18, 715
Csp6I	GTAC	2 cut(s)	304, 946
CspAI	ACCGGT	1 cut(s)	973
CviAII	CATG	2 cut(s)	730, 1391
CviQI	GTAC	2 cut(s)	304, 946
DdeI	CTNAG	3 cut(s)	845, 884, 1193
DinI	GGCGCC	1 cut(s)	283
DpnI	GATC	8 cut(s)	372, 577, 851, 941, 1028, 1146, 1263, 1283
DpnII	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
DraI	TTTAAA	1 cut(s)	1093
EaeI	YGGCCR	1 cut(s)	298
Eam1104I	CTCTTC	1 cut(s)	736
EarI	CTCTTC	1 cut(s)	736
EciI	GGCGGA	4 cut(s)	247, 308, 382, 472
Ecl136II	GAGCTC	1 cut(s)	1006
Eco24I	GRGCYC	3 cut(s)	422, 721, 1008
Eco31I	GGTCTC	1 cut(s)	82
Eco47I	GGWCC	4 cut(s)	52, 686, 993, 1363
Eco53kI	GAGCTC	1 cut(s)	1006
Eco57I	CTGAAG	1 cut(s)	1388
Eco81I	CCTNAGG	1 cut(s)	845
Eco88I	CYCGRG	3 cut(s)	511, 1033, 1058
EcoICRI	GAGCTC	1 cut(s)	1006
EcoO109I	RGGNCCY	1 cut(s)	717
EcoRII	CCWGG	2 cut(s)	735, 1080
EcoT38I	GRGCYC	3 cut(s)	422, 721, 1008
EgeI	GGCGCC	1 cut(s)	283
EheI	GGCGCC	1 cut(s)	283
Esp3I	CGTCTC	2 cut(s)	280, 955
FaeI	CATG	2 cut(s)	733, 1394
FaiI	YATR	5 cut(s)	14, 528, 731, 1331, 1392
FaqI	GGGAC	4 cut(s)	482, 646, 979, 1051
FatI	CATG	2 cut(s)	729, 1390
FauI	CCCGC	6 cut(s)	171, 449, 662, 707, 1167, 1201
FblI	GTMKAC	1 cut(s)	805
FriOI	GRGCYC	3 cut(s)	422, 721, 1008
FspBI	CTAG	2 cut(s)	39, 1116
GlaI	GCGC	5 cut(s)	283, 1173, 1227, 1399, 1401
GsaI	CCCAGC	3 cut(s)	773, 1124, 1129
GsuI	CTGGAG	1 cut(s)	583
HaeII	RGCGCY	1 cut(s)	285
HaeIII	GGCC	5 cut(s)	300, 703, 719, 735, 747
HgaI	GACGC	2 cut(s)	18, 715
HhaI	GCGC	5 cut(s)	284, 1174, 1228, 1400, 1402
Hin1I	GRCGYC	3 cut(s)	282, 726, 870
Hin1II	CATG	2 cut(s)	733, 1394
Hin6I	GCGC	5 cut(s)	282, 1172, 1226, 1398, 1400
HinP1I	GCGC	5 cut(s)	282, 1172, 1226, 1398, 1400
HincII	GTYRAC	3 cut(s)	958, 1047, 1156
HindII	GTYRAC	3 cut(s)	958, 1047, 1156
HinfI	GANTC	9 cut(s)	479, 514, 706, 1031, 1132, 1203, 1295, 1324, 1341
HpaI	GTTAAC	1 cut(s)	1047
HphI	GGTGA	3 cut(s)	453, 1036, 1327
Hpy166II	GTNNAC	5 cut(s)	313, 806, 958, 1047, 1156
Hpy188I	TCNGA	8 cut(s)	417, 571, 652, 690, 854, 868, 1202, 1254
Hpy188III	TCNNGA	6 cut(s)	67, 212, 579, 600, 784, 847
Hpy8I	GTNNAC	5 cut(s)	313, 806, 958, 1047, 1156
Hpy99I	CGWCG	8 cut(s)	275, 356, 575, 838, 872, 875, 1004, 1045
HpyAV	CCTTC	2 cut(s)	73, 193
HpyCH4III	ACNGT	3 cut(s)	803, 1024, 1073
HpyCH4IV	ACGT	5 cut(s)	870, 948, 1043, 1158, 1387
HpyCH4V	TGCA	3 cut(s)	138, 399, 1333
HpyF10VI	GCNNNNNNNGC	7 cut(s)	396, 405, 437, 549, 732, 894, 1121
HpyF3I	CTNAG	3 cut(s)	845, 884, 1193
HpySE526I	ACGT	5 cut(s)	870, 948, 1043, 1158, 1387
Hsp92I	GRCGYC	3 cut(s)	282, 726, 870
Hsp92II	CATG	2 cut(s)	733, 1394
HspAI	GCGC	5 cut(s)	282, 1172, 1226, 1398, 1400
KasI	GGCGCC	1 cut(s)	281
KroI	GCCGGC	2 cut(s)	587, 1063
KroNI	GCCGGC	2 cut(s)	589, 1065
KspAI	GTTAAC	1 cut(s)	1047
Kzo9I	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
Lsp1109I	GCAGC	5 cut(s)	374, 378, 778, 888, 1382
MaeI	CTAG	2 cut(s)	39, 1116
MaeII	ACGT	5 cut(s)	870, 948, 1043, 1158, 1387
MaeIII	GTNAC	4 cut(s)	30, 521, 839, 1010
MalI	GATC	8 cut(s)	372, 577, 851, 941, 1028, 1146, 1263, 1283
MbiI	CCGCTC	1 cut(s)	1368
MboI	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
MflI	RGATCY	1 cut(s)	575
MhlI	GDGCHC	3 cut(s)	422, 721, 1008
MluCI	AATT	2 cut(s)	791, 968
MluI	ACGCGT	1 cut(s)	27
Mly113I	GGCGCC	1 cut(s)	282
MlyI	GAGTC	6 cut(s)	473, 523, 715, 1025, 1126, 1197
MmeI	TCCRAC	3 cut(s)	181, 594, 891
MroNI	GCCGGC	2 cut(s)	587, 1063
MroXI	GAANNNNTTC	2 cut(s)	791, 1244
MseI	TTAA	4 cut(s)	695, 966, 1046, 1092
MspA1I	CMGCKG	2 cut(s)	387, 769
MspR9I	CCNGG	8 cut(s)	423, 532, 631, 700, 737, 1082, 1137, 1236
MssI	GTTTAAAC	1 cut(s)	1093
MvaI	CCWGG	2 cut(s)	737, 1082
MvnI	CGCG	6 cut(s)	29, 1174, 1208, 1226, 1372, 1400
MwoI	GCNNNNNNNGC	7 cut(s)	396, 405, 437, 549, 732, 894, 1121
NaeI	GCCGGC	2 cut(s)	589, 1065
NarI	GGCGCC	1 cut(s)	282
NciI	CCSGG	6 cut(s)	423, 532, 631, 700, 1137, 1236
NdeII	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
NgoMIV	GCCGGC	2 cut(s)	587, 1063
NheI	GCTAGC	1 cut(s)	1115
NlaIII	CATG	2 cut(s)	733, 1394
NmeAIII	GCCGAG	3 cut(s)	303, 690, 729
NmuCI	GTSAC	1 cut(s)	30
NspV	TTCGAA	1 cut(s)	878
PauI	GCGCGC	1 cut(s)	1398
PcsI	WCGNNNNNNNCGW	2 cut(s)	830, 1040
PdiI	GCCGGC	2 cut(s)	589, 1065
PdmI	GAANNNNTTC	2 cut(s)	791, 1244
PfeI	GAWTC	3 cut(s)	1295, 1324, 1341
PflFI	GACNNNGTC	1 cut(s)	494
PfoI	TCCNGGA	1 cut(s)	629
PinAI	ACCGGT	1 cut(s)	973
PleI	GAGTC	6 cut(s)	473, 522, 714, 1025, 1126, 1197
PluTI	GGCGCC	1 cut(s)	285
PmeI	GTTTAAAC	1 cut(s)	1093
PpsI	GAGTC	6 cut(s)	473, 522, 714, 1025, 1126, 1197
PshAI	GACNNNNGTC	2 cut(s)	74, 513
Psp124BI	GAGCTC	1 cut(s)	1008
Psp6I	CCWGG	2 cut(s)	735, 1080
PspFI	CCCAGC	3 cut(s)	769, 1120, 1125
PspGI	CCWGG	2 cut(s)	735, 1080
PspOMI	GGGCCC	1 cut(s)	717
PspPI	GGNCC	9 cut(s)	52, 686, 701, 717, 718, 733, 746, 993, 1363
PstNI	CAGNNNCTG	1 cut(s)	546
PsuI	RGATCY	1 cut(s)	575
PsyI	GACNNNGTC	1 cut(s)	494
PteI	GCGCGC	1 cut(s)	1398
PvuII	CAGCTG	1 cut(s)	769
RsaI	GTAC	2 cut(s)	305, 947
RsaNI	GTAC	2 cut(s)	304, 946
SacI	GAGCTC	1 cut(s)	1008
SaqAI	TTAA	4 cut(s)	695, 966, 1046, 1092
Sau3AI	GATC	8 cut(s)	370, 575, 849, 939, 1026, 1144, 1261, 1281
Sau96I	GGNCC	9 cut(s)	52, 686, 701, 717, 718, 733, 746, 993, 1363
ScaI	AGTACT	1 cut(s)	305
SchI	GAGTC	6 cut(s)	473, 523, 715, 1025, 1126, 1197
ScrFI	CCNGG	8 cut(s)	423, 532, 631, 700, 737, 1082, 1137, 1236
SduI	GDGCHC	3 cut(s)	422, 721, 1008
SfoI	GGCGCC	1 cut(s)	283
SfuI	TTCGAA	1 cut(s)	878
SgrAI	CRCCGGYG	1 cut(s)	637
SinI	GGWCC	4 cut(s)	52, 686, 993, 1363
SpeI	ACTAGT	1 cut(s)	38
Sse9I	AATT	2 cut(s)	791, 968
SspDI	GGCGCC	1 cut(s)	281
SspMI	CTAG	2 cut(s)	39, 1116
SstI	GAGCTC	1 cut(s)	1008
StyD4I	CCNGG	8 cut(s)	421, 530, 629, 698, 735, 1080, 1135, 1234
TaaI	ACNGT	3 cut(s)	803, 1024, 1073
TaiI	ACGT	5 cut(s)	873, 951, 1046, 1161, 1390
TaqI	TCGA	7 cut(s)	68, 213, 878, 999, 1029, 1143, 1269
TasI	AATT	2 cut(s)	791, 968
TatI	WGTACW	1 cut(s)	303
TfiI	GAWTC	3 cut(s)	1295, 1324, 1341
Tru1I	TTAA	4 cut(s)	695, 966, 1046, 1092
Tru9I	TTAA	4 cut(s)	695, 966, 1046, 1092
TscAI	CASTG	1 cut(s)	476
TseFI	GTSAC	1 cut(s)	30
TseI	GCWGC	5 cut(s)	366, 387, 766, 901, 1395
Tsp45I	GTSAC	1 cut(s)	30
TspDTI	ATGAA	2 cut(s)	17, 1237
TspGWI	ACGGA	6 cut(s)	507, 588, 943, 976, 1111, 1288
TspRI	CASTG	1 cut(s)	476
Tth111I	GACNNNGTC	1 cut(s)	494
VpaK11BI	GGWCC	4 cut(s)	52, 686, 993, 1363
XapI	RAATTY	1 cut(s)	791
XmiI	GTMKAC	1 cut(s)	805
XmnI	GAANNNNTTC	2 cut(s)	791, 1244
XspI	CTAG	2 cut(s)	39, 1116
ZraI	GACGTC	1 cut(s)	871
ZrmI	AGTACT	1 cut(s)	305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.