Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002395

Physical Location & Seq

Genomic Coordinates Reverse (-)

5470263 .. 5472791

Gene Structure 2529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0062900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGTATCTCGCTTGCAGAGAAGAAAATTAAGAAGTACTCGAAAGAGAAAACAAACGAGGAAGAGAAGATGTCGAATTGCCGATCTGCCGGATTGCATTCTGGAATACATACTTTCATTGATACCTCTAAAAGACGCAGTAGAAACTAGCCTGGTTTGCCGTGATTGGAGGCCCTTTTTACTAAAACGGCGCAATCTGGTATTTGACTTCGAGGGGTATGTTAGGAGGCCGCCACAGTTTGAAAAACGTGTGGATACATATTTGCAGCTGTATAAAGGTGACAAGGTCGACTCTTTCACAGTGGAATTCACTGATCCAGAAGGTGGCGACGTCCTTGATCGATGGATCCGTTTCGCAATTACAAAGGGAGTTGAAGAACTTCATCTTCGACATCACGTTTTTGATTATGTTTTCCCTCACTGGTTACTTTCTGAACAAGTAAACGCAGGCTCAAGAGTTAATCTAAAAGTTCTGTCAATATGTAGCATTGATGGTATTTTACGACCTCCTCCTGATTTTAACGGATTCAATCAGCTAAAGACTCTTCATCTAATTCATGCTATCATCGATCCAAGTTTTACGTCAAATCTCTTTTCTGTCTTTGCGTCCCTCGAAAGCTTGACCTTATATCGCTGCAGCCTTGGTCGATATCTTGCTAATACTAGAACTGATCTGAATATTGTTGCCGGTGATCGTCTAACTGAACTGAGAGTCATGGATTGCGGCCCAGCCAAAATCAAAATTTCTGCACAAAATCTTGCCTCCTTGGAATATATTAATAATCATTGGACCTCTCTTTCTATCAAAACTCCGCGTTTAGCAAGAATTTATTTGCCAGACACTGTTCACGATCCATTGTTACCTCATGTTCTAACACAATTTGCGACGTGTTCTGAGCTCGAGTCTCTTTGTCTGCGGATGTACCCGGAAACCCTAATCAATTTCAGCATGCCAGCTTTTGGAAATTTGAGGAAATTGAAGGTGGATATCTGCATCCAATATGGTCGTCCATACAATGATGACAATCTTCTTCGCTTTCTGGATTTTCTCAAGGCTGCACCCGTTTTGGAAGAGCTTGTAACAGCTTTGATTGACCTCAAGTTTACTGACACTACTGATGAACGAGAGATAAGGAATGTTTCTGGATTTACACATGATAACTTGAAATTAGTTAAGATGAAGAGTTTCCACGGTCACTGGTCCGAAATAGAGTTTGCGATTTGTATTCTCAAGTACACAACAAATCTCAAGATAATGGAAATTGGGCCTTTCGCAAGAAGCGTTTCTGGTGACTACTTTCGAGAGAAGATCCAATCGGATCTTGATCTCCGGCTTGAGAGTCGGGGGAGCACTCTCTTGTTCGGGCTTCTAGTCCCAGTTCCTTTGTTGTTTTGTTTGCATCTTATTTTTCCCTTCCCACCTCTTCTCCGGCTAGTGGCGGTTCTGGAGGGGATGATGGCTCAGGCTACTGGAGTGGCTTTTAGGCAGGGATGCGGCCCGGGGTTGGTGGATCGGTGCTCGATGCGGGTTCTGGCATCTCCACTGGTTCTGGGATCGGGGAGGTGGACGGGAGCTAGTTCTCATGGCAAGGTCGATACGGGGGTGACTCTGTTCCTTTCTTCCGGGTTCCAGGGTGGTCGGCGATGTGGTGCGGTGGTGGTGCGGCGCTGGGCTACGGCACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0007049 GO:0007275 GO:0008150 GO:0009555 GO:0009556 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016043 GO:0016787 GO:0016798 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0034293 GO:0043062 GO:0043934 GO:0044085 GO:0044703 GO:0045229 GO:0048229 GO:0048236 GO:0048646 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0085029 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pectate_lyase_3

Protein Analysis

561

Amino Acids

63.93

Weight (kDa)

9.25

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	27 - 57	6.9e-06	F-box domain
LRR_At1g61320_AtMIF1	PF23622	109 - 421	9e-29	At1g61320/AtMIF1, LRR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002395)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050
fragaria_vesca	FvH4_3g12840 FvH4_6g36530
malus_domestica	MD05G1247500.v1.1 MD09G1167600.v1.1 MD10G1228300.v1.1
prunus_persica	Prupe.3G025600_v2.0.a1 Prupe.4G116600_v2.0.a1
pyrus_communis	pycom05g22350 pycom05g22360 pycom09g08510 pycom10g19190
rosa_chinensis	RchiOBHm_Chr2g0148991 RchiOBHm_Chr5g0020781
rosa_laevigata	RLG00000020361 RLG00000032562
rosa_multiflora	Rmu_co8368081.1_g000001 Rmu_co8378405.1_g000001 Rmu_sc0001397.1_g000010 Rmu_sc0002527.1_g000006 Rmu_sc0002527.1_g000007
rosa_roxburghii	Rroxscaffold_1G00057520 Rroxscaffold_2G00098530
rosa_rugosa	Rorug02G0408600 Rorug05G0062800 Rorug05G0062900
rosa_samantha	Rh2AG467800 Rh2BG480400 Rh2CG454200 Rh2DG489300 Rh5AG152800 Rh5BG152500 Rh5CG164100 Rh5DG152000
rosa_wichuraiana	Rw2G038110 Rw5G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	333
AccB7I	CCANNNNNTGG	2 cut(s)	323, 959
AccI	GTMKAC	1 cut(s)	288
AccII	CGCG	1 cut(s)	814
AciI	CCGC	9 cut(s)	230, 723, 812, 916, 1439, 1494, 1525, 1652, 1663
AclWI	GGATC	9 cut(s)	308, 340, 353, 563, 845, 1303, 1326, 1518, 1561
AcsI	RAATTY	4 cut(s)	305, 741, 825, 964
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	3 cut(s)	37, 923, 1235
AfiI	CCNNNNNNNGG	4 cut(s)	323, 959, 1435, 1504
AflIII	ACRYGT	2 cut(s)	247, 887
AgsI	TTSAA	5 cut(s)	242, 374, 529, 979, 1165
AjiI	CACGTC	1 cut(s)	888
AjnI	CCWGG	2 cut(s)	150, 1629
AluBI	AGCT	8 cut(s)	268, 535, 618, 898, 956, 1075, 1085, 1574
AluI	AGCT	8 cut(s)	268, 535, 618, 898, 956, 1075, 1085, 1574
Alw21I	GWGCWC	3 cut(s)	900, 1352, 1520
Alw26I	GTCTC	1 cut(s)	909
AlwI	GGATC	9 cut(s)	308, 340, 353, 563, 845, 1303, 1326, 1518, 1561
AlwNI	CAGNNNCTG	1 cut(s)	842
Ama87I	CYCGRG	2 cut(s)	899, 1498
AoxI	GGCC	5 cut(s)	170, 227, 724, 1265, 1495
ApeKI	GCWGC	4 cut(s)	265, 633, 636, 1055
ApoI	RAATTY	4 cut(s)	305, 741, 825, 964
AseI	ATTAAT	1 cut(s)	777
Asp700I	GAANNNNTTC	3 cut(s)	378, 1184, 1282
AspLEI	GCGC	2 cut(s)	192, 1668
AspS9I	GGNCC	6 cut(s)	171, 725, 789, 1200, 1265, 1496
AsuC2I	CCSGG	4 cut(s)	926, 1499, 1500, 1624
AsuHPI	GGTGA	4 cut(s)	290, 701, 1301, 1615
AvaI	CYCGRG	2 cut(s)	899, 1498
AvaII	GGWCC	2 cut(s)	789, 1200
BaeI	ACNNNNGTAYC	2 cut(s)	1587, 1620
BamHI	GGATCC	1 cut(s)	345
BanII	GRGCYC	1 cut(s)	900
Bbv12I	GWGCWC	3 cut(s)	900, 1352, 1520
BbvI	GCAGC	4 cut(s)	277, 620, 648, 1042
BccI	CCATC	3 cut(s)	336, 485, 1450
BceAI	ACGGC	2 cut(s)	144, 203
BciT130I	CCWGG	2 cut(s)	152, 1631
BciVI	GTATCC	1 cut(s)	247
BcnI	CCSGG	4 cut(s)	926, 1499, 1500, 1624
BcoDI	GTCTC	1 cut(s)	909
BfaI	CTAG	5 cut(s)	147, 663, 1370, 1433, 1575
BfmI	CTRYAG	1 cut(s)	634
BfoI	RGCGCY	1 cut(s)	1669
BfuI	GTATCC	1 cut(s)	247
BisI	GCNGC	8 cut(s)	230, 266, 634, 637, 724, 1056, 1495, 1664
BlsI	GCNGC	8 cut(s)	231, 267, 635, 638, 725, 1057, 1496, 1665
BmcAI	AGTACT	1 cut(s)	37
Bme1390I	CCNGG	6 cut(s)	152, 926, 1499, 1500, 1624, 1631
Bme18I	GGWCC	2 cut(s)	789, 1200
BmeT110I	CYCGRG	2 cut(s)	899, 1498
BmgBI	CACGTC	1 cut(s)	888
BmgT120I	GGNCC	6 cut(s)	171, 725, 789, 1200, 1265, 1496
BmiI	GGNNCC	2 cut(s)	347, 1628
BmrFI	CCNGG	6 cut(s)	152, 926, 1499, 1500, 1624, 1631
BmrI	ACTGGG	1 cut(s)	1370
BmsI	GCATC	5 cut(s)	1002, 1408, 1481, 1512, 1544
BmuI	ACTGGG	1 cut(s)	1370
BpmI	CTGGAG	2 cut(s)	1466, 1491
Bpu10I	CCTNAGC	1 cut(s)	1461
BpuEI	CTTGAG	6 cut(s)	436, 1034, 1082, 1214, 1232, 1355
BpuMI	CCSGG	4 cut(s)	926, 1499, 1500, 1624
Bsa29I	ATCGAT	2 cut(s)	340, 567
BsaBI	GATNNNNATC	2 cut(s)	1023, 1323
BsaHI	GRCGYC	1 cut(s)	330
BsaJI	CCNNGG	6 cut(s)	640, 765, 1189, 1498, 1499, 1630
BsaXI	ACNNNNNCTCC	2 cut(s)	1410, 1440
Bsc4I	CCNNNNNNNGG	4 cut(s)	323, 959, 1435, 1504
Bse118I	RCCGGY	1 cut(s)	686
Bse1I	ACTGG	5 cut(s)	425, 1202, 1376, 1474, 1548
Bse8I	GATNNNNATC	2 cut(s)	1023, 1323
BseBI	CCWGG	2 cut(s)	152, 1631
BseCI	ATCGAT	2 cut(s)	340, 567
BseDI	CCNNGG	6 cut(s)	640, 765, 1189, 1498, 1499, 1630
BseGI	GGATG	4 cut(s)	924, 993, 1458, 1496
BseJI	GATNNNNATC	2 cut(s)	1023, 1323
BseLI	CCNNNNNNNGG	4 cut(s)	323, 959, 1435, 1504
BseMII	CTCAG	3 cut(s)	698, 885, 1475
BseNI	ACTGG	5 cut(s)	425, 1202, 1376, 1474, 1548
BseRI	GAGGAG	1 cut(s)	498
BseXI	GCAGC	4 cut(s)	277, 620, 648, 1042
BseYI	CCCAGC	2 cut(s)	727, 1668
BsgI	GTGCAG	2 cut(s)	732, 1041
Bsh1236I	CGCG	1 cut(s)	814
BshFI	GGCC	5 cut(s)	172, 229, 726, 1267, 1497
BshVI	ATCGAT	2 cut(s)	340, 567
BsiHKAI	GWGCWC	3 cut(s)	900, 1352, 1520
BsiHKCI	CYCGRG	2 cut(s)	899, 1498
BsiSI	CCGG	7 cut(s)	89, 687, 926, 1330, 1429, 1499, 1623
BslFI	GGGAC	2 cut(s)	592, 1358
BslI	CCNNNNNNNGG	4 cut(s)	323, 959, 1435, 1504
BsmAI	GTCTC	1 cut(s)	909
BsmFI	GGGAC	2 cut(s)	592, 1358
BsmI	GAATGC	1 cut(s)	96
BsnI	GGCC	5 cut(s)	172, 229, 726, 1267, 1497
BsoBI	CYCGRG	2 cut(s)	899, 1498
Bsp1286I	GDGCHC	3 cut(s)	900, 1352, 1520
BspACI	CCGC	9 cut(s)	230, 723, 812, 916, 1439, 1494, 1525, 1652, 1663
BspANI	GGCC	5 cut(s)	172, 229, 726, 1267, 1497
BspCNI	CTCAG	3 cut(s)	699, 886, 1474
BspDI	ATCGAT	2 cut(s)	340, 567
BspFNI	CGCG	1 cut(s)	814
BspLI	GGNNCC	2 cut(s)	347, 1628
BspMAI	CTGCAG	1 cut(s)	638
BspPI	GGATC	9 cut(s)	308, 340, 353, 563, 845, 1303, 1326, 1518, 1561
BspQI	GCTCTTC	1 cut(s)	1065
BsrFI	RCCGGY	1 cut(s)	686
BsrI	ACTGG	5 cut(s)	425, 1202, 1376, 1474, 1548
BssAI	RCCGGY	1 cut(s)	686
BssECI	CCNNGG	6 cut(s)	640, 765, 1189, 1498, 1499, 1630
BssNI	GRCGYC	1 cut(s)	330
BssT1I	CCWWGG	2 cut(s)	640, 765
Bst2UI	CCWGG	2 cut(s)	152, 1631
Bst4CI	ACNGT	5 cut(s)	237, 301, 844, 1193, 1683
Bst6I	CTCTTC	5 cut(s)	56, 549, 1065, 1175, 1428
BstACI	GRCGYC	1 cut(s)	330
BstC8I	GCNNGC	4 cut(s)	14, 448, 950, 954
BstDEI	CTNAG	3 cut(s)	707, 894, 1461
BstDSI	CCRYGG	1 cut(s)	1189
BstF5I	GGATG	4 cut(s)	924, 993, 1458, 1496
BstFNI	CGCG	1 cut(s)	814
BstH2I	RGCGCY	1 cut(s)	1669
BstHHI	GCGC	2 cut(s)	192, 1668
BstMAI	GTCTC	1 cut(s)	909
BstMWI	GCNNNNNNNGC	1 cut(s)	156
BstNI	CCWGG	2 cut(s)	152, 1631
BstNSI	RCATGY	1 cut(s)	952
BstSCI	CCNGG	6 cut(s)	150, 924, 1497, 1498, 1622, 1629
BstSFI	CTRYAG	1 cut(s)	634
BstUI	CGCG	1 cut(s)	814
BstV1I	GCAGC	4 cut(s)	277, 620, 648, 1042
BstX2I	RGATCY	3 cut(s)	345, 1308, 1318
BstYI	RGATCY	3 cut(s)	345, 1308, 1318
Bsu15I	ATCGAT	2 cut(s)	340, 567
BsuI	GTATCC	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	172, 229, 726, 1267, 1497
BsuTUI	ATCGAT	2 cut(s)	340, 567
BtgI	CCRYGG	1 cut(s)	1189
BtgZI	GCGATG	1 cut(s)	1657
BtrI	CACGTC	1 cut(s)	888
BtsCI	GGATG	4 cut(s)	924, 993, 1458, 1496
BtsIMutI	CAGTG	6 cut(s)	306, 309, 418, 840, 1195, 1541
Cac8I	GCNNGC	4 cut(s)	14, 448, 950, 954
CaiI	CAGNNNCTG	1 cut(s)	842
CfoI	GCGC	2 cut(s)	192, 1668
Cfr10I	RCCGGY	1 cut(s)	686
Cfr13I	GGNCC	6 cut(s)	171, 725, 789, 1200, 1265, 1496
Cfr9I	CCCGGG	1 cut(s)	1498
ClaI	ATCGAT	2 cut(s)	340, 567
CseI	GACGC	2 cut(s)	143, 594
Csp6I	GTAC	3 cut(s)	36, 922, 1234
CviAII	CATG	6 cut(s)	557, 715, 866, 949, 1154, 1583
CviQI	GTAC	3 cut(s)	36, 922, 1234
DdeI	CTNAG	3 cut(s)	707, 894, 1461
Eam1104I	CTCTTC	5 cut(s)	56, 549, 1065, 1175, 1428
EarI	CTCTTC	5 cut(s)	56, 549, 1065, 1175, 1428
Ecl136II	GAGCTC	1 cut(s)	898
Eco130I	CCWWGG	2 cut(s)	640, 765
Eco24I	GRGCYC	1 cut(s)	900
Eco32I	GATATC	2 cut(s)	650, 988
Eco47I	GGWCC	2 cut(s)	789, 1200
Eco53kI	GAGCTC	1 cut(s)	898
Eco88I	CYCGRG	2 cut(s)	899, 1498
EcoICRI	GAGCTC	1 cut(s)	898
EcoO109I	RGGNCCY	1 cut(s)	171
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	2 cut(s)	150, 1629
EcoRV	GATATC	2 cut(s)	650, 988
EcoT14I	CCWWGG	2 cut(s)	640, 765
EcoT38I	GRGCYC	1 cut(s)	900
ErhI	CCWWGG	2 cut(s)	640, 765
FaeI	CATG	6 cut(s)	560, 718, 869, 952, 1157, 1586
FaqI	GGGAC	2 cut(s)	592, 1358
FatI	CATG	6 cut(s)	556, 714, 865, 948, 1153, 1582
FauI	CCCGC	1 cut(s)	1518
FblI	GTMKAC	1 cut(s)	288
Fnu4HI	GCNGC	8 cut(s)	230, 266, 634, 637, 724, 1056, 1495, 1664
FokI	GGATG	4 cut(s)	931, 980, 1465, 1503
FriOI	GRGCYC	1 cut(s)	900
Fsp4HI	GCNGC	8 cut(s)	230, 266, 634, 637, 724, 1056, 1495, 1664
FspBI	CTAG	5 cut(s)	147, 663, 1370, 1433, 1575
GlaI	GCGC	2 cut(s)	191, 1667
GluI	GCNGC	8 cut(s)	230, 266, 634, 637, 724, 1056, 1495, 1664
GsaI	CCCAGC	2 cut(s)	731, 1672
GsuI	CTGGAG	2 cut(s)	1466, 1491
HaeII	RGCGCY	1 cut(s)	1669
HaeIII	GGCC	5 cut(s)	172, 229, 726, 1267, 1497
HapII	CCGG	7 cut(s)	89, 687, 926, 1330, 1429, 1499, 1623
HgaI	GACGC	2 cut(s)	143, 594
HhaI	GCGC	2 cut(s)	192, 1668
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	6 cut(s)	560, 718, 869, 952, 1157, 1586
Hin6I	GCGC	2 cut(s)	190, 1666
HinP1I	GCGC	2 cut(s)	190, 1666
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HindIII	AAGCTT	1 cut(s)	616
HinfI	GANTC	7 cut(s)	290, 525, 541, 711, 902, 1339, 1606
HpaII	CCGG	7 cut(s)	89, 687, 926, 1330, 1429, 1499, 1623
HphI	GGTGA	4 cut(s)	290, 701, 1301, 1615
Hpy166II	GTNNAC	6 cut(s)	289, 442, 847, 1104, 1236, 1566
Hpy188I	TCNGA	5 cut(s)	433, 675, 895, 1204, 1318
Hpy8I	GTNNAC	6 cut(s)	289, 442, 847, 1104, 1236, 1566
Hpy99I	CGWCG	2 cut(s)	332, 889
HpyAV	CCTTC	3 cut(s)	314, 973, 1423
HpyCH4III	ACNGT	5 cut(s)	237, 301, 844, 1193, 1683
HpyCH4IV	ACGT	5 cut(s)	247, 330, 396, 581, 887
HpyCH4V	TGCA	8 cut(s)	16, 96, 265, 636, 749, 993, 1058, 1399
HpyF10VI	GCNNNNNNNGC	1 cut(s)	156
HpyF3I	CTNAG	3 cut(s)	707, 894, 1461
HpySE526I	ACGT	5 cut(s)	247, 330, 396, 581, 887
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	6 cut(s)	560, 718, 869, 952, 1157, 1586
HspAI	GCGC	2 cut(s)	190, 1666
LguI	GCTCTTC	1 cut(s)	1065
LmnI	GCTCC	2 cut(s)	1347, 1571
Lsp1109I	GCAGC	4 cut(s)	277, 620, 648, 1042
LweI	GCATC	5 cut(s)	1002, 1408, 1481, 1512, 1544
MaeI	CTAG	5 cut(s)	147, 663, 1370, 1433, 1575
MaeII	ACGT	5 cut(s)	247, 330, 396, 581, 887
MaeIII	GTNAC	7 cut(s)	278, 423, 858, 1078, 1193, 1289, 1603
MflI	RGATCY	3 cut(s)	345, 1308, 1318
MhlI	GDGCHC	3 cut(s)	900, 1352, 1520
MlyI	GAGTC	6 cut(s)	284, 535, 720, 911, 1348, 1600
MroXI	GAANNNNTTC	3 cut(s)	378, 1184, 1282
MseI	TTAA	5 cut(s)	29, 459, 519, 777, 1173
MspA1I	CMGCKG	1 cut(s)	268
MspI	CCGG	7 cut(s)	89, 687, 926, 1330, 1429, 1499, 1623
MspR9I	CCNGG	6 cut(s)	152, 926, 1499, 1500, 1624, 1631
Mva1269I	GAATGC	1 cut(s)	96
MvaI	CCWGG	2 cut(s)	152, 1631
MvnI	CGCG	1 cut(s)	814
MwoI	GCNNNNNNNGC	1 cut(s)	156
NciI	CCSGG	4 cut(s)	926, 1499, 1500, 1624
NlaIII	CATG	6 cut(s)	560, 718, 869, 952, 1157, 1586
NlaIV	GGNNCC	2 cut(s)	347, 1628
NmuCI	GTSAC	4 cut(s)	278, 1193, 1289, 1603
NspI	RCATGY	1 cut(s)	952
PaeI	GCATGC	1 cut(s)	952
PaeR7I	CTCGAG	1 cut(s)	899
PciSI	GCTCTTC	1 cut(s)	1065
PcsI	WCGNNNNNNNCGW	2 cut(s)	346, 1278
PctI	GAATGC	1 cut(s)	96
PdmI	GAANNNNTTC	3 cut(s)	378, 1184, 1282
PfeI	GAWTC	1 cut(s)	525
PflFI	GACNNNGTC	1 cut(s)	284
PflMI	CCANNNNNTGG	2 cut(s)	323, 959
PkrI	GCNGC	8 cut(s)	231, 267, 635, 638, 725, 1057, 1496, 1665
PleI	GAGTC	6 cut(s)	284, 535, 719, 910, 1347, 1600
PpsI	GAGTC	6 cut(s)	284, 535, 719, 910, 1347, 1600
PshBI	ATTAAT	1 cut(s)	777
Psp124BI	GAGCTC	1 cut(s)	900
Psp6I	CCWGG	2 cut(s)	150, 1629
PspFI	CCCAGC	2 cut(s)	727, 1668
PspGI	CCWGG	2 cut(s)	150, 1629
PspN4I	GGNNCC	2 cut(s)	347, 1628
PspPI	GGNCC	6 cut(s)	171, 725, 789, 1200, 1265, 1496
PspXI	VCTCGAGB	1 cut(s)	899
PstI	CTGCAG	1 cut(s)	638
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	3 cut(s)	345, 1308, 1318
PsyI	GACNNNGTC	1 cut(s)	284
PvuII	CAGCTG	1 cut(s)	268
RsaI	GTAC	3 cut(s)	37, 923, 1235
RsaNI	GTAC	3 cut(s)	36, 922, 1234
SacI	GAGCTC	1 cut(s)	900
SalI	GTCGAC	1 cut(s)	287
SapI	GCTCTTC	1 cut(s)	1065
SaqAI	TTAA	5 cut(s)	29, 459, 519, 777, 1173
SatI	GCNGC	8 cut(s)	230, 266, 634, 637, 724, 1056, 1495, 1664
Sau96I	GGNCC	6 cut(s)	171, 725, 789, 1200, 1265, 1496
ScaI	AGTACT	1 cut(s)	37
SchI	GAGTC	6 cut(s)	284, 535, 720, 911, 1348, 1600
ScrFI	CCNGG	6 cut(s)	152, 926, 1499, 1500, 1624, 1631
SduI	GDGCHC	3 cut(s)	900, 1352, 1520
SfaNI	GCATC	5 cut(s)	1002, 1408, 1481, 1512, 1544
SfcI	CTRYAG	1 cut(s)	634
Sfr274I	CTCGAG	1 cut(s)	899
SinI	GGWCC	2 cut(s)	789, 1200
SlaI	CTCGAG	1 cut(s)	899
SmaI	CCCGGG	1 cut(s)	1500
SmlI	CTYRAG	7 cut(s)	451, 899, 1049, 1097, 1229, 1247, 1334
SmoI	CTYRAG	7 cut(s)	451, 899, 1049, 1097, 1229, 1247, 1334
SphI	GCATGC	1 cut(s)	952
SsiI	CCGC	9 cut(s)	230, 723, 812, 916, 1439, 1494, 1525, 1652, 1663
SspI	AATATT	1 cut(s)	679
SspMI	CTAG	5 cut(s)	147, 663, 1370, 1433, 1575
SstI	GAGCTC	1 cut(s)	900
StyD4I	CCNGG	6 cut(s)	150, 924, 1497, 1498, 1622, 1629
StyI	CCWWGG	2 cut(s)	640, 765
TaaI	ACNGT	5 cut(s)	237, 301, 844, 1193, 1683
TaiI	ACGT	5 cut(s)	250, 333, 399, 584, 890
TatI	WGTACW	2 cut(s)	35, 1233
TauI	GCSGC	4 cut(s)	232, 726, 1497, 1666
TfiI	GAWTC	1 cut(s)	525
Tru1I	TTAA	5 cut(s)	29, 459, 519, 777, 1173
Tru9I	TTAA	5 cut(s)	29, 459, 519, 777, 1173
TscAI	CASTG	6 cut(s)	306, 316, 425, 847, 1202, 1548
TseFI	GTSAC	4 cut(s)	278, 1193, 1289, 1603
TseI	GCWGC	4 cut(s)	265, 633, 636, 1055
Tsp45I	GTSAC	4 cut(s)	278, 1193, 1289, 1603
TspDTI	ATGAA	6 cut(s)	105, 371, 536, 545, 1134, 1193
TspGWI	ACGGA	2 cut(s)	338, 537
TspMI	CCCGGG	1 cut(s)	1498
TspRI	CASTG	6 cut(s)	306, 316, 425, 847, 1202, 1548
Tth111I	GACNNNGTC	1 cut(s)	284
Van91I	CCANNNNNTGG	2 cut(s)	323, 959
VpaK11BI	GGWCC	2 cut(s)	789, 1200
VspI	ATTAAT	1 cut(s)	777
XapI	RAATTY	4 cut(s)	305, 741, 825, 964
XceI	RCATGY	1 cut(s)	952
XhoI	CTCGAG	1 cut(s)	899
XmaI	CCCGGG	1 cut(s)	1498
XmiI	GTMKAC	1 cut(s)	288
XmnI	GAANNNNTTC	3 cut(s)	378, 1184, 1282
XspI	CTAG	5 cut(s)	147, 663, 1370, 1433, 1575
ZraI	GACGTC	1 cut(s)	331
ZrmI	AGTACT	1 cut(s)	37

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.