Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002395

Physical Location & Seq

Genomic Coordinates Reverse (-)

15930829 .. 15933058

Gene Structure 2230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGAAGCTGCAATGCCGGGAAAGACTCTACTGTGGATTCTGATTTGTAGCTTGTTTATCACAGTTCATGTTTACGGAGAATCCTCTCAGATGGGTCATTTTTCGAGGAGTGATTATCTAGACCAAATGCGAAGACTGCAAGAGTTCAAGGCCTCATTAACCCGGCACGATTCGGGTTCTTTTGTTGCACCATCTTCAGTCTCACCTGCTCCTAGCCCTAACCCTCCGGGGAGGACTAGTCCTCGTGTGTATCACGTGACAACGTACGGTGCTGATCCTACCGGGAACAGGGACAGCACTGAGGCCTTGGCTCAGGCATTTGCAGATGCATTTAGAGGTCCATCAGAAGGGTTCTTGATGGAGGGAATTAGCAACCTTGGTGGTGCACAGATCAATCTTGAAGGTGGCCAGTACGTGATTAGCAAACCCCTCCGGTTTCCTGCTGCCGGAGTAGGAAACCTTATGATTCATGGAGGAACTTTGAGGGCCTCAGATAACTTCCCGACTGACGGGTACTTGATTGATTTATCTACTTCATCATCATCATCCCCCAACAAGAATGAAAAAAACAAAGAGAGCTCATCATCAATGTCTGCACAGCTTTCTTCATCATCCTACAACTATGAGTACATAACCCTAAAAGACCTTATGCTAGACGCCAACTACAGAGGTGGGGGCATTTCAGTCATAAACTCACTCAGAACCAGCATAGACAATTGCTACATAACCCATTTCAACACCGATGGCATTCTAGTCCAAAGTGGCCATGAAACCTACATCAGGAACTCCTTCCTAGGCCAGCACATCACCGCGGGCGGTGATCACGACGAAAGAAACTTTTCCGGCACTGCAATCAACCTTAAGGGAAATGACAATGCTGTGACAGATGTGGTGATTTTCTCCGCGGCTGTAGGTATAATGATTTCGGGACCGGCTAATATACTTTCGGGTGTACATTGCTACAATAAGGCCACAGGTTTCGGAGGTGTTGGGATTTACTTGAGATTGCCTGGTTTGACACAGACTAGGATCGTCAATTCTTACATGGACTACACTGGTATAGTTGCTGAAGACCCAGTTCAGCTTGATATATCAAACAGCTTCTTCCTTGGTGACGCATACATCGTGTTGAAATCAATAAAGGGTGTTGCCAATGGGGTTAATATAGTTAACAACATGTTCACTGGGTACAATAAGGGGATTGAAATTGTTCAATTGGACCAATCAAATGGGGGTTTCAAGGAGATTGAGCAAGTTGTTGTGGACAGGAACGCTGTGAGGGGGATGAACATAAAGGGCACAATTGGAAGGAGAACTGTGCAAGGCAATGGAACCTCATGGAATATAGACTTTAACCCAATTCTTCTATTTCCTAATCTTATTAGGCATGTGCAGTACTCTTTGAGCACTGGTGCTAGAAATGTGTTCCCCAACCATGCCCTGAGGAATGTATCAGATAATCGGGTCGTGATTGAGTCAGATGTGGCGGTTCCAGCTTCGGTTTTTGTGACAGTGGATCAAGGAATGTCAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0007049 GO:0007275 GO:0008150 GO:0009555 GO:0009556 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016043 GO:0016787 GO:0016798 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0034293 GO:0043062 GO:0043934 GO:0044085 GO:0044703 GO:0045229 GO:0048229 GO:0048236 GO:0048646 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0085029 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pectate_lyase_3

Protein Analysis

511

Amino Acids

55.1

Weight (kDa)

6.06

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pect-lyase_RHGA_epim	PF12708	86 - 327	4.2e-08	Rhamnogalacturonase A/epimerase, pectate lyase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002395)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050 AT4G20050
fragaria_vesca	FvH4_3g12840 FvH4_6g36530
malus_domestica	MD05G1247500.v1.1 MD09G1167600.v1.1 MD10G1228300.v1.1
prunus_persica	Prupe.3G025600_v2.0.a1 Prupe.4G116600_v2.0.a1
pyrus_communis	pycom05g22350 pycom05g22360 pycom09g08510 pycom10g19190
rosa_chinensis	RchiOBHm_Chr2g0148991 RchiOBHm_Chr5g0020781
rosa_laevigata	RLG00000020361 RLG00000032562
rosa_multiflora	Rmu_co8368081.1_g000001 Rmu_co8378405.1_g000001 Rmu_sc0001397.1_g000010 Rmu_sc0002527.1_g000006 Rmu_sc0002527.1_g000007
rosa_roxburghii	Rroxscaffold_1G00057520 Rroxscaffold_2G00098530
rosa_rugosa	Rorug02G0408600 Rorug05G0062800 Rorug05G0062900
rosa_samantha	Rh2AG467800 Rh2BG480400 Rh2CG454200 Rh2DG489300 Rh5AG152800 Rh5BG152500 Rh5CG164100 Rh5DG152000
rosa_wichuraiana	Rw2G038110 Rw5G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	214
Acc36I	ACCTGC	1 cut(s)	214
AccII	CGCG	2 cut(s)	812, 905
AciI	CCGC	6 cut(s)	810, 812, 816, 903, 905, 1487
AclWI	GGATC	3 cut(s)	269, 1037, 1524
AcoI	YGGCCR	2 cut(s)	406, 763
AcuI	CTGAAG	2 cut(s)	180, 1089
AcvI	CACGTG	1 cut(s)	256
AcyI	GRCGYC	1 cut(s)	657
AfaI	GTAC	7 cut(s)	266, 413, 515, 629, 954, 1190, 1397
AfiI	CCNNNNNNNGG	5 cut(s)	288, 347, 446, 509, 780
AflII	CTTAAG	1 cut(s)	860
AflIII	ACRYGT	1 cut(s)	1176
AgsI	TTSAA	7 cut(s)	148, 401, 736, 1132, 1205, 1214, 1240
AhlI	ACTAGT	1 cut(s)	236
AjnI	CCWGG	1 cut(s)	1009
AluBI	AGCT	8 cut(s)	8, 51, 579, 601, 1084, 1101, 1496, 1533
AluI	AGCT	8 cut(s)	8, 51, 579, 601, 1084, 1101, 1496, 1533
Alw21I	GWGCWC	3 cut(s)	388, 581, 1409
Alw26I	GTCTC	1 cut(s)	205
Alw44I	GTGCAC	1 cut(s)	384
AlwI	GGATC	3 cut(s)	269, 1037, 1524
AoxI	GGCC	7 cut(s)	150, 303, 406, 486, 763, 796, 969
ApaLI	GTGCAC	1 cut(s)	384
ApeKI	GCWGC	2 cut(s)	8, 443
Asp700I	GAANNNNTTC	3 cut(s)	788, 838, 1209
AspA2I	CCTAGG	1 cut(s)	793
AspS9I	GGNCC	4 cut(s)	338, 486, 929, 1219
AsuC2I	CCSGG	4 cut(s)	18, 163, 228, 283
AsuHPI	GGTGA	5 cut(s)	195, 799, 830, 904, 1124
AvaII	GGWCC	3 cut(s)	338, 929, 1219
AvrII	CCTAGG	1 cut(s)	793
AxyI	CCTNAGG	1 cut(s)	1442
BaeGI	GKGCMC	2 cut(s)	388, 1301
BalI	TGGCCA	2 cut(s)	408, 765
BanII	GRGCYC	1 cut(s)	581
BauI	CACGAG	1 cut(s)	243
BbrPI	CACGTG	1 cut(s)	256
BbsI	GAAGAC	2 cut(s)	139, 1077
Bbv12I	GWGCWC	3 cut(s)	388, 581, 1409
BbvI	GCAGC	1 cut(s)	430
BccI	CCATC	5 cut(s)	85, 199, 349, 352, 737
BciT130I	CCWGG	1 cut(s)	1011
BclI	TGATCA	1 cut(s)	820
BcnI	CCSGG	4 cut(s)	18, 163, 228, 283
BcoDI	GTCTC	1 cut(s)	205
BcuI	ACTAGT	1 cut(s)	236
BfaI	CTAG	8 cut(s)	119, 213, 237, 653, 752, 794, 1026, 1416
BfmI	CTRYAG	2 cut(s)	664, 909
BfrI	CTTAAG	1 cut(s)	860
BfuAI	ACCTGC	1 cut(s)	214
BisI	GCNGC	3 cut(s)	9, 444, 906
BlnI	CCTAGG	1 cut(s)	793
BlsI	GCNGC	3 cut(s)	10, 445, 907
BmcAI	AGTACT	1 cut(s)	1397
Bme1390I	CCNGG	5 cut(s)	18, 163, 228, 283, 1011
Bme18I	GGWCC	3 cut(s)	338, 929, 1219
BmgT120I	GGNCC	4 cut(s)	338, 486, 929, 1219
BmiI	GGNNCC	3 cut(s)	930, 1333, 1491
BmrFI	CCNGG	5 cut(s)	18, 163, 228, 283, 1011
BmrI	ACTGGG	2 cut(s)	1070, 1194
BmsI	GCATC	1 cut(s)	316
BmuI	ACTGGG	2 cut(s)	1070, 1194
BpiI	GAAGAC	2 cut(s)	139, 1077
Bpu10I	CCTNAGC	1 cut(s)	312
BpuEI	CTTGAG	1 cut(s)	1021
BpuMI	CCSGG	4 cut(s)	18, 163, 228, 283
BsaAI	YACGTR	2 cut(s)	256, 415
BsaHI	GRCGYC	1 cut(s)	657
BsaJI	CCNNGG	7 cut(s)	227, 306, 376, 793, 810, 903, 1108
BsaWI	WCCGGW	1 cut(s)	432
BsaXI	ACNNNNNCTCC	2 cut(s)	223, 253
Bsc4I	CCNNNNNNNGG	5 cut(s)	288, 347, 446, 509, 780
Bse118I	RCCGGY	1 cut(s)	931
Bse1I	ACTGG	5 cut(s)	409, 1060, 1076, 1189, 1414
Bse21I	CCTNAGG	1 cut(s)	1442
Bse3DI	GCAATG	3 cut(s)	18, 955, 1333
BseBI	CCWGG	1 cut(s)	1011
BseDI	CCNNGG	7 cut(s)	227, 306, 376, 793, 810, 903, 1108
BseGI	GGATG	3 cut(s)	545, 611, 1290
BseLI	CCNNNNNNNGG	5 cut(s)	288, 347, 446, 509, 780
BseMI	GCAATG	3 cut(s)	18, 955, 1333
BseMII	CTCAG	6 cut(s)	101, 291, 326, 504, 712, 1433
BseNI	ACTGG	5 cut(s)	409, 1060, 1076, 1189, 1414
BseRI	GAGGAG	1 cut(s)	121
BseSI	GKGCMC	2 cut(s)	388, 1301
BseXI	GCAGC	1 cut(s)	430
BsgI	GTGCAG	2 cut(s)	579, 1412
Bsh1236I	CGCG	2 cut(s)	812, 905
BshFI	GGCC	7 cut(s)	152, 305, 408, 488, 765, 798, 971
BsiHKAI	GWGCWC	3 cut(s)	388, 581, 1409
BsiSI	CCGG	8 cut(s)	17, 163, 227, 282, 433, 447, 843, 932
BsiWI	CGTACG	1 cut(s)	264
BslFI	GGGAC	2 cut(s)	305, 942
BslI	CCNNNNNNNGG	5 cut(s)	288, 347, 446, 509, 780
BsmAI	GTCTC	1 cut(s)	205
BsmFI	GGGAC	2 cut(s)	305, 942
BsmI	GAATGC	1 cut(s)	747
BsnI	GGCC	7 cut(s)	152, 305, 408, 488, 765, 798, 971
Bsp1286I	GDGCHC	4 cut(s)	388, 581, 1301, 1409
Bsp1407I	TGTACA	1 cut(s)	952
Bsp143I	GATC	5 cut(s)	274, 390, 820, 1029, 1516
BspACI	CCGC	6 cut(s)	810, 812, 816, 903, 905, 1487
BspANI	GGCC	7 cut(s)	152, 305, 408, 488, 765, 798, 971
BspCNI	CTCAG	6 cut(s)	100, 292, 325, 503, 711, 1434
BspFNI	CGCG	2 cut(s)	812, 905
BspLI	GGNNCC	3 cut(s)	930, 1333, 1491
BspMI	ACCTGC	1 cut(s)	214
BspPI	GGATC	3 cut(s)	269, 1037, 1524
BspTI	CTTAAG	1 cut(s)	860
BsrDI	GCAATG	3 cut(s)	18, 955, 1333
BsrFI	RCCGGY	1 cut(s)	931
BsrGI	TGTACA	1 cut(s)	952
BsrI	ACTGG	5 cut(s)	409, 1060, 1076, 1189, 1414
BssAI	RCCGGY	1 cut(s)	931
BssECI	CCNNGG	7 cut(s)	227, 306, 376, 793, 810, 903, 1108
BssMI	GATC	5 cut(s)	274, 390, 820, 1029, 1516
BssNI	GRCGYC	1 cut(s)	657
BssSI	CACGAG	1 cut(s)	243
BssT1I	CCWWGG	4 cut(s)	306, 376, 793, 1108
Bst2BI	CACGAG	1 cut(s)	243
Bst2UI	CCWGG	1 cut(s)	1011
Bst4CI	ACNGT	5 cut(s)	33, 64, 269, 1318, 1513
BstACI	GRCGYC	1 cut(s)	657
BstAFI	CTTAAG	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	952
BstBAI	YACGTR	2 cut(s)	256, 415
BstC8I	GCNNGC	2 cut(s)	800, 814
BstDEI	CTNAG	6 cut(s)	87, 300, 312, 490, 698, 1442
BstDSI	CCRYGG	2 cut(s)	810, 903
BstENI	CCTNNNNNAGG	1 cut(s)	778
BstF5I	GGATG	3 cut(s)	545, 611, 1290
BstFNI	CGCG	2 cut(s)	812, 905
BstKTI	GATC	5 cut(s)	277, 393, 823, 1032, 1519
BstMAI	GTCTC	1 cut(s)	205
BstMBI	GATC	5 cut(s)	274, 390, 820, 1029, 1516
BstMWI	GCNNNNNNNGC	2 cut(s)	136, 1493
BstNI	CCWGG	1 cut(s)	1011
BstNSI	RCATGY	2 cut(s)	1180, 1391
BstSCI	CCNGG	5 cut(s)	16, 161, 226, 281, 1009
BstSFI	CTRYAG	2 cut(s)	664, 909
BstSLI	GKGCMC	2 cut(s)	388, 1301
BstUI	CGCG	2 cut(s)	812, 905
BstV1I	GCAGC	1 cut(s)	430
BstV2I	GAAGAC	2 cut(s)	139, 1077
BstXI	CCANNNNNNTGG	1 cut(s)	1229
Bsu36I	CCTNAGG	1 cut(s)	1442
BsuRI	GGCC	7 cut(s)	152, 305, 408, 488, 765, 798, 971
BtgI	CCRYGG	2 cut(s)	810, 903
BtsCI	GGATG	3 cut(s)	545, 611, 1290
BtsI	GCAGTG	1 cut(s)	846
BtsIMutI	CAGTG	6 cut(s)	297, 846, 1053, 1182, 1407, 1518
BveI	ACCTGC	1 cut(s)	214
Cac8I	GCNNGC	2 cut(s)	800, 814
Cfr10I	RCCGGY	1 cut(s)	931
Cfr13I	GGNCC	4 cut(s)	338, 486, 929, 1219
Cfr42I	CCGCGG	2 cut(s)	813, 906
CseI	GACGC	2 cut(s)	665, 1124
Csp6I	GTAC	7 cut(s)	265, 412, 514, 628, 953, 1189, 1396
CspCI	CAANNNNNGTGG	2 cut(s)	361, 396
CviAII	CATG	8 cut(s)	68, 470, 767, 1045, 1177, 1338, 1388, 1436
CviQI	GTAC	7 cut(s)	265, 412, 514, 628, 953, 1189, 1396
DdeI	CTNAG	6 cut(s)	87, 300, 312, 490, 698, 1442
DpnI	GATC	5 cut(s)	276, 392, 822, 1031, 1518
DpnII	GATC	5 cut(s)	274, 390, 820, 1029, 1516
EaeI	YGGCCR	2 cut(s)	406, 763
Ecl136II	GAGCTC	1 cut(s)	579
Eco130I	CCWWGG	4 cut(s)	306, 376, 793, 1108
Eco147I	AGGCCT	2 cut(s)	152, 305
Eco24I	GRGCYC	1 cut(s)	581
Eco47I	GGWCC	3 cut(s)	338, 929, 1219
Eco53kI	GAGCTC	1 cut(s)	579
Eco57I	CTGAAG	2 cut(s)	180, 1089
Eco72I	CACGTG	1 cut(s)	256
Eco81I	CCTNAGG	1 cut(s)	1442
EcoICRI	GAGCTC	1 cut(s)	579
EcoNI	CCTNNNNNAGG	1 cut(s)	778
EcoO109I	RGGNCCY	1 cut(s)	486
EcoRII	CCWGG	1 cut(s)	1009
EcoT14I	CCWWGG	4 cut(s)	306, 376, 793, 1108
EcoT22I	ATGCAT	1 cut(s)	331
EcoT38I	GRGCYC	1 cut(s)	581
ErhI	CCWWGG	4 cut(s)	306, 376, 793, 1108
FaeI	CATG	8 cut(s)	71, 473, 770, 1048, 1180, 1341, 1391, 1439
FaqI	GGGAC	2 cut(s)	305, 942
FatI	CATG	8 cut(s)	67, 469, 766, 1044, 1176, 1337, 1387, 1435
FauI	CCCGC	1 cut(s)	805
FbaI	TGATCA	1 cut(s)	820
Fnu4HI	GCNGC	3 cut(s)	9, 444, 906
FokI	GGATG	3 cut(s)	532, 598, 1297
FriOI	GRGCYC	1 cut(s)	581
Fsp4HI	GCNGC	3 cut(s)	9, 444, 906
FspBI	CTAG	8 cut(s)	119, 213, 237, 653, 752, 794, 1026, 1416
GluI	GCNGC	3 cut(s)	9, 444, 906
HaeIII	GGCC	7 cut(s)	152, 305, 408, 488, 765, 798, 971
HapII	CCGG	8 cut(s)	17, 163, 227, 282, 433, 447, 843, 932
HgaI	GACGC	2 cut(s)	665, 1124
Hin1I	GRCGYC	1 cut(s)	657
Hin1II	CATG	8 cut(s)	71, 473, 770, 1048, 1180, 1341, 1391, 1439
HincII	GTYRAC	1 cut(s)	1171
HindII	GTYRAC	1 cut(s)	1171
HinfI	GANTC	6 cut(s)	25, 37, 80, 170, 466, 1475
HpaI	GTTAAC	1 cut(s)	1171
HpaII	CCGG	8 cut(s)	17, 163, 227, 282, 433, 447, 843, 932
HphI	GGTGA	5 cut(s)	195, 799, 830, 904, 1124
Hpy166II	GTNNAC	6 cut(s)	73, 386, 953, 1171, 1182, 1264
Hpy188I	TCNGA	8 cut(s)	42, 90, 346, 493, 701, 983, 1456, 1480
Hpy188III	TCNNGA	8 cut(s)	119, 355, 398, 502, 781, 824, 927, 1468
Hpy8I	GTNNAC	6 cut(s)	73, 386, 953, 1171, 1182, 1264
Hpy99I	CGWCG	1 cut(s)	830
HpyAV	CCTTC	4 cut(s)	341, 395, 799, 1302
HpyCH4III	ACNGT	5 cut(s)	33, 64, 269, 1318, 1513
HpyCH4IV	ACGT	3 cut(s)	255, 263, 414
HpyF10VI	GCNNNNNNNGC	2 cut(s)	136, 1493
HpyF3I	CTNAG	6 cut(s)	87, 300, 312, 490, 698, 1442
HpySE526I	ACGT	3 cut(s)	255, 263, 414
Hsp92I	GRCGYC	1 cut(s)	657
Hsp92II	CATG	8 cut(s)	71, 473, 770, 1048, 1180, 1341, 1391, 1439
Ksp22I	TGATCA	1 cut(s)	820
KspAI	GTTAAC	1 cut(s)	1171
KspI	CCGCGG	2 cut(s)	813, 906
Kzo9I	GATC	5 cut(s)	274, 390, 820, 1029, 1516
LmnI	GCTCC	1 cut(s)	214
Lsp1109I	GCAGC	1 cut(s)	430
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	8 cut(s)	119, 213, 237, 653, 752, 794, 1026, 1416
MaeII	ACGT	3 cut(s)	255, 263, 414
MaeIII	GTNAC	4 cut(s)	256, 880, 1112, 1507
MalI	GATC	5 cut(s)	276, 392, 822, 1031, 1518
MboI	GATC	5 cut(s)	274, 390, 820, 1029, 1516
MboII	GAAGA	6 cut(s)	144, 186, 597, 1082, 1096, 1355
MfeI	CAATTG	3 cut(s)	715, 1214, 1302
MhlI	GDGCHC	4 cut(s)	388, 581, 1301, 1409
MlsI	TGGCCA	2 cut(s)	408, 765
MluCI	AATT	7 cut(s)	366, 715, 1036, 1206, 1214, 1302, 1359
MluNI	TGGCCA	2 cut(s)	408, 765
MlyI	GAGTC	2 cut(s)	19, 1484
Mox20I	TGGCCA	2 cut(s)	408, 765
Mph1103I	ATGCAT	1 cut(s)	331
MroXI	GAANNNNTTC	3 cut(s)	788, 838, 1209
MscI	TGGCCA	2 cut(s)	408, 765
MseI	TTAA	5 cut(s)	158, 861, 1161, 1170, 1353
Msp20I	TGGCCA	2 cut(s)	408, 765
MspA1I	CMGCKG	2 cut(s)	812, 905
MspCI	CTTAAG	1 cut(s)	860
MspI	CCGG	8 cut(s)	17, 163, 227, 282, 433, 447, 843, 932
MspR9I	CCNGG	5 cut(s)	18, 163, 228, 283, 1011
MunI	CAATTG	3 cut(s)	715, 1214, 1302
Mva1269I	GAATGC	1 cut(s)	747
MvaI	CCWGG	1 cut(s)	1011
MvnI	CGCG	2 cut(s)	812, 905
MwoI	GCNNNNNNNGC	2 cut(s)	136, 1493
NciI	CCSGG	4 cut(s)	18, 163, 228, 283
NdeII	GATC	5 cut(s)	274, 390, 820, 1029, 1516
NlaIII	CATG	8 cut(s)	71, 473, 770, 1048, 1180, 1341, 1391, 1439
NlaIV	GGNNCC	3 cut(s)	930, 1333, 1491
NmuCI	GTSAC	4 cut(s)	256, 880, 1112, 1507
NsiI	ATGCAT	1 cut(s)	331
NspI	RCATGY	2 cut(s)	1180, 1391
PaqCI	CACCTGC	1 cut(s)	214
PceI	AGGCCT	2 cut(s)	152, 305
PciI	ACATGT	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	1 cut(s)	1122
PctI	GAATGC	1 cut(s)	747
PdmI	GAANNNNTTC	3 cut(s)	788, 838, 1209
PfeI	GAWTC	4 cut(s)	37, 80, 170, 466
Pfl23II	CGTACG	1 cut(s)	264
PkrI	GCNGC	3 cut(s)	10, 445, 907
PleI	GAGTC	2 cut(s)	19, 1483
PmaCI	CACGTG	1 cut(s)	256
PmlI	CACGTG	1 cut(s)	256
PpsI	GAGTC	2 cut(s)	19, 1483
Ppu21I	YACGTR	2 cut(s)	256, 415
PscI	ACATGT	1 cut(s)	1176
Psp124BI	GAGCTC	1 cut(s)	581
Psp6I	CCWGG	1 cut(s)	1009
PspCI	CACGTG	1 cut(s)	256
PspGI	CCWGG	1 cut(s)	1009
PspLI	CGTACG	1 cut(s)	264
PspN4I	GGNNCC	3 cut(s)	930, 1333, 1491
PspPI	GGNCC	4 cut(s)	338, 486, 929, 1219
RsaI	GTAC	7 cut(s)	266, 413, 515, 629, 954, 1190, 1397
RsaNI	GTAC	7 cut(s)	265, 412, 514, 628, 953, 1189, 1396
SacI	GAGCTC	1 cut(s)	581
SacII	CCGCGG	2 cut(s)	813, 906
SaqAI	TTAA	5 cut(s)	158, 861, 1161, 1170, 1353
SatI	GCNGC	3 cut(s)	9, 444, 906
Sau3AI	GATC	5 cut(s)	274, 390, 820, 1029, 1516
Sau96I	GGNCC	4 cut(s)	338, 486, 929, 1219
ScaI	AGTACT	1 cut(s)	1397
SchI	GAGTC	2 cut(s)	19, 1484
ScrFI	CCNGG	5 cut(s)	18, 163, 228, 283, 1011
SduI	GDGCHC	4 cut(s)	388, 581, 1301, 1409
SfaNI	GCATC	1 cut(s)	316
SfcI	CTRYAG	2 cut(s)	664, 909
Sfr303I	CCGCGG	2 cut(s)	813, 906
SgrBI	CCGCGG	2 cut(s)	813, 906
SinI	GGWCC	3 cut(s)	338, 929, 1219
SmlI	CTYRAG	2 cut(s)	860, 1000
SmoI	CTYRAG	2 cut(s)	860, 1000
SpeI	ACTAGT	1 cut(s)	236
Sse9I	AATT	7 cut(s)	366, 715, 1036, 1206, 1214, 1302, 1359
SseBI	AGGCCT	2 cut(s)	152, 305
SsiI	CCGC	6 cut(s)	810, 812, 816, 903, 905, 1487
SspMI	CTAG	8 cut(s)	119, 213, 237, 653, 752, 794, 1026, 1416
SstI	GAGCTC	1 cut(s)	581
StuI	AGGCCT	2 cut(s)	152, 305
StyD4I	CCNGG	5 cut(s)	16, 161, 226, 281, 1009
StyI	CCWWGG	4 cut(s)	306, 376, 793, 1108
TaaI	ACNGT	5 cut(s)	33, 64, 269, 1318, 1513
TaiI	ACGT	3 cut(s)	258, 266, 417
TaqI	TCGA	1 cut(s)	104
TasI	AATT	7 cut(s)	366, 715, 1036, 1206, 1214, 1302, 1359
TatI	WGTACW	3 cut(s)	627, 952, 1395
TauI	GCSGC	1 cut(s)	908
TfiI	GAWTC	4 cut(s)	37, 80, 170, 466
Tru1I	TTAA	5 cut(s)	158, 861, 1161, 1170, 1353
Tru9I	TTAA	5 cut(s)	158, 861, 1161, 1170, 1353
TscAI	CASTG	6 cut(s)	304, 853, 1060, 1189, 1414, 1518
TseFI	GTSAC	4 cut(s)	256, 880, 1112, 1507
TseI	GCWGC	2 cut(s)	8, 443
Tsp45I	GTSAC	4 cut(s)	256, 880, 1112, 1507
TspDTI	ATGAA	7 cut(s)	56, 458, 525, 576, 597, 783, 1301
TspGWI	ACGGA	1 cut(s)	90
TspRI	CASTG	6 cut(s)	304, 853, 1060, 1189, 1414, 1518
Vha464I	CTTAAG	1 cut(s)	860
VneI	GTGCAC	1 cut(s)	384
VpaK11BI	GGWCC	3 cut(s)	338, 929, 1219
XagI	CCTNNNNNAGG	1 cut(s)	778
XbaI	TCTAGA	1 cut(s)	118
XceI	RCATGY	2 cut(s)	1180, 1391
XmaJI	CCTAGG	1 cut(s)	793
XmnI	GAANNNNTTC	3 cut(s)	788, 838, 1209
XspI	CTAG	8 cut(s)	119, 213, 237, 653, 752, 794, 1026, 1416
ZrmI	AGTACT	1 cut(s)	1397
Zsp2I	ATGCAT	1 cut(s)	331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.