Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004105

Physical Location & Seq

Genomic Coordinates Forward (+)

11320298 .. 11322123

Gene Structure 1826 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0127500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGTGCTTTCAAACTATTCTATGTTTCCACTGTTTCTTTTTCTTCTCCTATCGTCTTCTTTCGCACATCCTTCATCTTCGAAAGAAGACATTTTTATCCAGTGCCTCTCGTATCATTCCACGGTTTCTATTTCTTTCTCTAGCACCTTTTTCACCCCGAACAACTCTTCCTTCACCACCGTCCTAAATTCAACTGCGGAAAACCTCAGATACGTAGTCCCTTCCATGCCAAAGCCAGAGTTAATTTTCAGACCAACGCATGAATCCCATGTTCAAGCTGCTGTTATTTGCTCAAAACAGCTGGGAATACCTCTCAGGGTCCGAAGTGGAGGCCATGACTACGAAGGCCTCTCCTATGCCTCCCAAATTGAAACACCTTTCATCGTTGTAGACCTTGCCAAGCTTCGATCAGTTAACGTTGATATCCAACACAACAGTGCATGGATTCAAGCCGGTGCCACCATTGGCGAAGTTTACTACAGAATTGCTGAGAAAAGCACAACACATGGCTTCCCTGCCGGTCTTTGCACAAGCTTAGGCGTGGGGGGACATATAACCGGAGGTGCGTATGGTTCCATGATGAGAAAATATGGCCTTGGTGCTGATAACGTTGTCGATGCGCGAATAATTGATGTCAATGGCAGGATTCTTGACCGAAAGACCATGGGAGAAGATCTTTTTTGGGCAATCAGAGGTGGAGGAGGAGCAAGCTTTGGAATCATCATGTGGTGGAAGATAAAGTTGGTTCCTGTTCCATCAACTGTAACAGTTTTCACAGTTGCCAGGACCTTGGAACAAGGTGGCACAAAGCTCCTACATAGGTGGCAACAAGTGGCTGCTGCTGAGCTTGATGAAGATCTCTTTATTAGAGTTATCATACAACTAACAAGTGACAGCGAAAGTGGCAAGAGAACTGTCACGACTCTTTACCAAGCTCTGTTTCTCGGAGGAGTTGAAAAACTCCTCCATGTTATGCAAACAGGCTTCCCGGAACTGGGTTTGACCCGAAAAGATTGTACTGAAACGAGTTGGATCAAATCCGTGCTGTACATTGCAAACTACCCGAGTGGAACTCAACCCGAGATTCTGCTTCAAGGAAAATCCACAACCAAGACTTACTTCAAAGCCAAATCAGACTATGTCAAAGATCCAATCCCTGAAACCGGGCTTGAGGGACTGTGGAAAAAGTTGATGGAAGAAACCAATCCTCTGTTGATTTGGACACCATATGGGGGAATGATGAGCAAGATTTCGGAGTCCGAGACACCTTTCCCTCACAGAAAAGGAGTGCTCTTCAAGATTCAGTACCTGACTGGGTGGCAAGCTGCAAATCAAGAGGCAAAGCACATGGATTGGATTAGGAAGCTTTACAACTACATGGCTCCTTATGTTACAAAGTCCCCAAGGCAAGCATATGTGAATTATAGGGATCTTGATTTGGGGATAAACAAAAAAAGGAACACTAGCATCACTGAAGCAAGTGCTTGGGGTACCAGGTATTTCAAGGACAACTTCATCAGACTGATAAAAATTAAGACCAAAGTCGATCCGGAAAACTTCTTCAGGCATGAACAGAGCATCCCACCTCTTCCACCCAAACAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LTP_2

Protein Analysis

535

Amino Acids

60.08

Weight (kDa)

9.13

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	79 - 217	4.5e-26	FAD binding domain
BBE	PF08031	471 - 528	1.7e-20	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18280 AT1G73550 AT1G73550 AT1G73560
fragaria_vesca	FvH4_3g18850 FvH4_5g17510 FvH4_7g32070
malus_domestica	MD06G1228500.v1.1 MD14G1237700.v1.1
prunus_persica	Prupe.5G235000_v2.0.a1
pyrus_communis	pycom06g20480 pycom14g19890
rosa_chinensis	RchiOBHm_Chr5g0031711 RchiOBHm_Chr7g0178151
rosa_laevigata	RLG00000005467 RLG00000033334
rosa_multiflora	Rmu_sc0002999.1_g000029
rosa_roxburghii	Rroxscaffold_1G00048540 Rroxscaffold_3G00275130
rosa_rugosa	Rorug05G0127500 Rorug06G0413800
rosa_samantha	Rh5AG221600 Rh5BG221500 Rh5CG244400 Rh5CG244700 Rh5DG226100 Rh5DG226200 Rh7AG013300 Rh7BG013200 Rh7CG013100 Rh7DG013400
rosa_wichuraiana	Rw5G020180 Rw7G001050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1490
AccB1I	GGYRCC	2 cut(s)	455, 1490
AccI	GTMKAC	1 cut(s)	390
AccII	CGCG	1 cut(s)	622
AccIII	TCCGGA	1 cut(s)	1549
AciI	CCGC	1 cut(s)	197
AclI	AACGTT	2 cut(s)	417, 609
AclWI	GGATC	4 cut(s)	1040, 1142, 1437, 1541
AcsI	RAATTY	1 cut(s)	187
AcuI	CTGAAG	2 cut(s)	1494, 1546
AfaI	GTAC	4 cut(s)	1018, 1049, 1307, 1492
AfiI	CCNNNNNNNGG	4 cut(s)	994, 995, 1163, 1232
AjnI	CCWGG	2 cut(s)	782, 1493
AjuI	GAANNNNNNNTTGG	6 cut(s)	725, 757, 924, 956, 1103, 1135
AleI	CACNNNNGTG	1 cut(s)	435
AloI	GAACNNNNNNTCC	4 cut(s)	152, 184, 1563, 1595
Alw21I	GWGCWC	1 cut(s)	1293
Alw26I	GTCTC	1 cut(s)	1256
AlwI	GGATC	4 cut(s)	1040, 1142, 1437, 1541
AlwNI	CAGNNNCTG	1 cut(s)	1309
Ama87I	CYCGRG	2 cut(s)	1063, 1079
Aor13HI	TCCGGA	1 cut(s)	1549
AoxI	GGCC	3 cut(s)	331, 346, 592
ApeKI	GCWGC	4 cut(s)	278, 836, 839, 1325
ApoI	RAATTY	1 cut(s)	187
Asp718I	GGTACC	1 cut(s)	1490
AspLEI	GCGC	1 cut(s)	622
AspS9I	GGNCC	2 cut(s)	319, 786
AsuC2I	CCSGG	2 cut(s)	989, 1165
AsuHPI	GGTGA	2 cut(s)	145, 166
AsuII	TTCGAA	1 cut(s)	80
AvaI	CYCGRG	2 cut(s)	1063, 1079
AvaII	GGWCC	2 cut(s)	319, 786
BanI	GGYRCC	2 cut(s)	455, 1490
BbsI	GAAGAC	2 cut(s)	48, 93
Bbv12I	GWGCWC	1 cut(s)	1293
BbvI	GCAGC	4 cut(s)	265, 823, 826, 1312
BccI	CCATC	2 cut(s)	763, 1186
BciT130I	CCWGG	2 cut(s)	784, 1495
BcnI	CCSGG	2 cut(s)	989, 1165
BcoDI	GTCTC	1 cut(s)	1256
BfaI	CTAG	2 cut(s)	141, 1464
BfmI	CTRYAG	1 cut(s)	478
BglII	AGATCT	2 cut(s)	673, 856
BisI	GCNGC	4 cut(s)	279, 837, 840, 1326
BlpI	GCTNAGC	1 cut(s)	843
BlsI	GCNGC	4 cut(s)	280, 838, 841, 1327
Bme1390I	CCNGG	4 cut(s)	784, 989, 1165, 1495
Bme18I	GGWCC	2 cut(s)	319, 786
BmeT110I	CYCGRG	2 cut(s)	1063, 1079
BmgT120I	GGNCC	2 cut(s)	319, 786
BmiI	GGNNCC	6 cut(s)	320, 457, 574, 747, 1383, 1492
BmrFI	CCNGG	4 cut(s)	784, 989, 1165, 1495
BmrI	ACTGGG	2 cut(s)	1004, 1323
BmsI	GCATC	3 cut(s)	607, 1476, 1587
BmuI	ACTGGG	2 cut(s)	1004, 1323
BoxI	GACNNNNGTC	1 cut(s)	1541
BpiI	GAAGAC	2 cut(s)	48, 93
BplI	GAGNNNNNCTC	2 cut(s)	1057, 1089
Bpu10I	CCTNAGC	1 cut(s)	535
Bpu1102I	GCTNAGC	1 cut(s)	843
Bpu14I	TTCGAA	1 cut(s)	80
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	2 cut(s)	989, 1165
BsaAI	YACGTR	1 cut(s)	214
BsaBI	GATNNNNATC	1 cut(s)	855
BsaJI	CCNNGG	5 cut(s)	120, 595, 663, 789, 1403
BsaWI	WCCGGW	2 cut(s)	557, 1549
Bsc4I	CCNNNNNNNGG	4 cut(s)	994, 995, 1163, 1232
Bse118I	RCCGGY	2 cut(s)	452, 518
Bse1I	ACTGG	3 cut(s)	100, 999, 1318
Bse3DI	GCAATG	1 cut(s)	1050
Bse8I	GATNNNNATC	1 cut(s)	855
BseAI	TCCGGA	1 cut(s)	1549
BseBI	CCWGG	2 cut(s)	784, 1495
BseDI	CCNNGG	5 cut(s)	120, 595, 663, 789, 1403
BseGI	GGATG	2 cut(s)	67, 1578
BseJI	GATNNNNATC	1 cut(s)	855
BseLI	CCNNNNNNNGG	4 cut(s)	994, 995, 1163, 1232
BseMI	GCAATG	1 cut(s)	1050
BseMII	CTCAG	4 cut(s)	220, 328, 480, 834
BseNI	ACTGG	3 cut(s)	100, 999, 1318
BseRI	GAGGAG	4 cut(s)	714, 717, 953, 963
BseXI	GCAGC	4 cut(s)	265, 823, 826, 1312
BseYI	CCCAGC	1 cut(s)	301
Bsh1236I	CGCG	1 cut(s)	622
BshFI	GGCC	3 cut(s)	333, 348, 594
BshNI	GGYRCC	2 cut(s)	455, 1490
BsiHKAI	GWGCWC	1 cut(s)	1293
BsiHKCI	CYCGRG	2 cut(s)	1063, 1079
BsiSI	CCGG	6 cut(s)	453, 519, 558, 989, 1164, 1550
BslFI	GGGAC	4 cut(s)	203, 561, 1188, 1384
BslI	CCNNNNNNNGG	4 cut(s)	994, 995, 1163, 1232
BsmAI	GTCTC	1 cut(s)	1256
BsmFI	GGGAC	4 cut(s)	203, 561, 1188, 1384
BsnI	GGCC	3 cut(s)	333, 348, 594
BsoBI	CYCGRG	2 cut(s)	1063, 1079
Bsp119I	TTCGAA	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	1293
Bsp13I	TCCGGA	1 cut(s)	1549
Bsp1407I	TGTACA	1 cut(s)	1047
Bsp143I	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
Bsp1720I	GCTNAGC	1 cut(s)	843
Bsp19I	CCATGG	1 cut(s)	663
BspACI	CCGC	1 cut(s)	197
BspANI	GGCC	3 cut(s)	333, 348, 594
BspCNI	CTCAG	4 cut(s)	219, 327, 481, 835
BspEI	TCCGGA	1 cut(s)	1549
BspFNI	CGCG	1 cut(s)	622
BspLI	GGNNCC	6 cut(s)	320, 457, 574, 747, 1383, 1492
BspPI	GGATC	4 cut(s)	1040, 1142, 1437, 1541
BspQI	GCTCTTC	1 cut(s)	1298
BspT104I	TTCGAA	1 cut(s)	80
BspT107I	GGYRCC	2 cut(s)	455, 1490
BsrDI	GCAATG	1 cut(s)	1050
BsrFI	RCCGGY	2 cut(s)	452, 518
BsrGI	TGTACA	1 cut(s)	1047
BsrI	ACTGG	3 cut(s)	100, 999, 1318
BssAI	RCCGGY	2 cut(s)	452, 518
BssECI	CCNNGG	5 cut(s)	120, 595, 663, 789, 1403
BssMI	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
BssT1I	CCWWGG	4 cut(s)	595, 663, 789, 1403
Bst2UI	CCWGG	2 cut(s)	784, 1495
Bst4CI	ACNGT	9 cut(s)	33, 124, 181, 437, 763, 769, 778, 916, 1179
Bst6I	CTCTTC	3 cut(s)	172, 1298, 1593
BstAUI	TGTACA	1 cut(s)	1047
BstBAI	YACGTR	1 cut(s)	214
BstBI	TTCGAA	1 cut(s)	80
BstC8I	GCNNGC	3 cut(s)	709, 1323, 1410
BstDEI	CTNAG	5 cut(s)	206, 314, 489, 535, 843
BstDSI	CCRYGG	2 cut(s)	120, 663
BstF5I	GGATG	2 cut(s)	67, 1578
BstFNI	CGCG	1 cut(s)	622
BstHHI	GCGC	1 cut(s)	622
BstKTI	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
BstMAI	GTCTC	1 cut(s)	1256
BstMBI	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
BstMWI	GCNNNNNNNGC	1 cut(s)	903
BstNI	CCWGG	2 cut(s)	784, 1495
BstPAI	GACNNNNGTC	1 cut(s)	1541
BstSCI	CCNGG	4 cut(s)	782, 987, 1163, 1493
BstSFI	CTRYAG	1 cut(s)	478
BstSNI	TACGTA	1 cut(s)	214
BstUI	CGCG	1 cut(s)	622
BstV1I	GCAGC	4 cut(s)	265, 823, 826, 1312
BstV2I	GAAGAC	2 cut(s)	48, 93
BstX2I	RGATCY	4 cut(s)	673, 856, 1147, 1429
BstXI	CCANNNNNNTGG	1 cut(s)	790
BstYI	RGATCY	4 cut(s)	673, 856, 1147, 1429
BsuRI	GGCC	3 cut(s)	333, 348, 594
BtgI	CCRYGG	2 cut(s)	120, 663
BtsCI	GGATG	2 cut(s)	67, 1578
BtsIMutI	CAGTG	4 cut(s)	29, 107, 442, 1470
Cac8I	GCNNGC	3 cut(s)	709, 1323, 1410
CaiI	CAGNNNCTG	1 cut(s)	1309
CfoI	GCGC	1 cut(s)	622
Cfr10I	RCCGGY	2 cut(s)	452, 518
Cfr13I	GGNCC	2 cut(s)	319, 786
CsiI	ACCWGGT	1 cut(s)	1493
Csp6I	GTAC	4 cut(s)	1017, 1048, 1306, 1491
CviQI	GTAC	4 cut(s)	1017, 1048, 1306, 1491
DdeI	CTNAG	5 cut(s)	206, 314, 489, 535, 843
DpnI	GATC	7 cut(s)	409, 675, 858, 1034, 1149, 1431, 1548
DpnII	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
Eam1104I	CTCTTC	3 cut(s)	172, 1298, 1593
EarI	CTCTTC	3 cut(s)	172, 1298, 1593
Eco105I	TACGTA	1 cut(s)	214
Eco130I	CCWWGG	4 cut(s)	595, 663, 789, 1403
Eco147I	AGGCCT	1 cut(s)	348
Eco32I	GATATC	1 cut(s)	424
Eco47I	GGWCC	2 cut(s)	319, 786
Eco57I	CTGAAG	2 cut(s)	1494, 1546
Eco88I	CYCGRG	2 cut(s)	1063, 1079
EcoO109I	RGGNCCY	1 cut(s)	786
EcoRII	CCWGG	2 cut(s)	782, 1493
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	4 cut(s)	595, 663, 789, 1403
ErhI	CCWWGG	4 cut(s)	595, 663, 789, 1403
FalI	AAGNNNNNCTT	4 cut(s)	1103, 1135, 1496, 1528
FaqI	GGGAC	4 cut(s)	203, 561, 1188, 1384
FauNDI	CATATG	2 cut(s)	1228, 1414
FblI	GTMKAC	1 cut(s)	390
Fnu4HI	GCNGC	4 cut(s)	279, 837, 840, 1326
FokI	GGATG	2 cut(s)	54, 1565
Fsp4HI	GCNGC	4 cut(s)	279, 837, 840, 1326
FspBI	CTAG	2 cut(s)	141, 1464
GlaI	GCGC	1 cut(s)	621
GluI	GCNGC	4 cut(s)	279, 837, 840, 1326
GsaI	CCCAGC	1 cut(s)	305
HaeIII	GGCC	3 cut(s)	333, 348, 594
HapII	CCGG	6 cut(s)	453, 519, 558, 989, 1164, 1550
HhaI	GCGC	1 cut(s)	622
Hin6I	GCGC	1 cut(s)	620
HinP1I	GCGC	1 cut(s)	620
HincII	GTYRAC	1 cut(s)	415
HindII	GTYRAC	1 cut(s)	415
HindIII	AAGCTT	4 cut(s)	401, 532, 709, 1364
HinfI	GANTC	8 cut(s)	263, 445, 646, 717, 922, 1084, 1256, 1300
HpaI	GTTAAC	1 cut(s)	415
HpaII	CCGG	6 cut(s)	453, 519, 558, 989, 1164, 1550
HphI	GGTGA	2 cut(s)	145, 166
Hpy166II	GTNNAC	3 cut(s)	391, 415, 475
Hpy188I	TCNGA	9 cut(s)	209, 251, 323, 692, 947, 1135, 1255, 1261, 1520
Hpy188III	TCNNGA	6 cut(s)	650, 919, 1297, 1334, 1433, 1550
Hpy8I	GTNNAC	3 cut(s)	391, 415, 475
HpyAV	CCTTC	4 cut(s)	81, 181, 231, 338
HpyCH4III	ACNGT	9 cut(s)	33, 124, 181, 437, 763, 769, 778, 916, 1179
HpyCH4IV	ACGT	3 cut(s)	213, 417, 609
HpyCH4V	TGCA	5 cut(s)	440, 528, 976, 1055, 1328
HpyF10VI	GCNNNNNNNGC	1 cut(s)	903
HpyF3I	CTNAG	5 cut(s)	206, 314, 489, 535, 843
HpySE526I	ACGT	3 cut(s)	213, 417, 609
HspAI	GCGC	1 cut(s)	620
Kpn2I	TCCGGA	1 cut(s)	1549
KpnI	GGTACC	1 cut(s)	1494
KspAI	GTTAAC	1 cut(s)	415
Kzo9I	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
LguI	GCTCTTC	1 cut(s)	1298
LmnI	GCTCC	3 cut(s)	704, 816, 1387
Lsp1109I	GCAGC	4 cut(s)	265, 823, 826, 1312
LweI	GCATC	3 cut(s)	607, 1476, 1587
MabI	ACCWGGT	1 cut(s)	1493
MaeI	CTAG	2 cut(s)	141, 1464
MaeII	ACGT	3 cut(s)	213, 417, 609
MaeIII	GTNAC	4 cut(s)	763, 890, 916, 1390
MalI	GATC	7 cut(s)	409, 675, 858, 1034, 1149, 1431, 1548
MboI	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
MflI	RGATCY	4 cut(s)	673, 856, 1147, 1429
MhlI	GDGCHC	1 cut(s)	1293
MluCI	AATT	7 cut(s)	187, 243, 366, 483, 627, 1420, 1530
MlyI	GAGTC	2 cut(s)	916, 1265
MmeI	TCCRAC	2 cut(s)	451, 1010
MroI	TCCGGA	1 cut(s)	1549
MseI	TTAA	3 cut(s)	242, 414, 1533
MslI	CAYNNNNRTG	1 cut(s)	435
MspA1I	CMGCKG	1 cut(s)	301
MspI	CCGG	6 cut(s)	453, 519, 558, 989, 1164, 1550
MspR9I	CCNGG	4 cut(s)	784, 989, 1165, 1495
MvaI	CCWGG	2 cut(s)	784, 1495
MvnI	CGCG	1 cut(s)	622
MwoI	GCNNNNNNNGC	1 cut(s)	903
NciI	CCSGG	2 cut(s)	989, 1165
NcoI	CCATGG	1 cut(s)	663
NdeI	CATATG	2 cut(s)	1228, 1414
NdeII	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
NlaIV	GGNNCC	6 cut(s)	320, 457, 574, 747, 1383, 1492
NmuCI	GTSAC	2 cut(s)	890, 916
NspV	TTCGAA	1 cut(s)	80
OliI	CACNNNNGTG	1 cut(s)	435
PceI	AGGCCT	1 cut(s)	348
PciSI	GCTCTTC	1 cut(s)	1298
PfeI	GAWTC	6 cut(s)	263, 445, 646, 717, 1084, 1300
PflFI	GACNNNGTC	1 cut(s)	1139
PfoI	TCCNGGA	1 cut(s)	987
PkrI	GCNGC	4 cut(s)	280, 838, 841, 1327
PleI	GAGTC	2 cut(s)	916, 1264
PpsI	GAGTC	2 cut(s)	916, 1264
Ppu21I	YACGTR	1 cut(s)	214
PpuMI	RGGWCCY	1 cut(s)	786
PshAI	GACNNNNGTC	1 cut(s)	1541
Psp1406I	AACGTT	2 cut(s)	417, 609
Psp5II	RGGWCCY	1 cut(s)	786
Psp6I	CCWGG	2 cut(s)	782, 1493
PspFI	CCCAGC	1 cut(s)	301
PspGI	CCWGG	2 cut(s)	782, 1493
PspN4I	GGNNCC	6 cut(s)	320, 457, 574, 747, 1383, 1492
PspPI	GGNCC	2 cut(s)	319, 786
PspPPI	RGGWCCY	1 cut(s)	786
PstNI	CAGNNNCTG	1 cut(s)	1309
PsuI	RGATCY	4 cut(s)	673, 856, 1147, 1429
PsyI	GACNNNGTC	1 cut(s)	1139
PvuII	CAGCTG	1 cut(s)	301
RsaI	GTAC	4 cut(s)	1018, 1049, 1307, 1492
RsaNI	GTAC	4 cut(s)	1017, 1048, 1306, 1491
RseI	CAYNNNNRTG	1 cut(s)	435
SapI	GCTCTTC	1 cut(s)	1298
SaqAI	TTAA	3 cut(s)	242, 414, 1533
SatI	GCNGC	4 cut(s)	279, 837, 840, 1326
Sau3AI	GATC	7 cut(s)	407, 673, 856, 1032, 1147, 1429, 1546
Sau96I	GGNCC	2 cut(s)	319, 786
SchI	GAGTC	2 cut(s)	916, 1265
ScrFI	CCNGG	4 cut(s)	784, 989, 1165, 1495
SduI	GDGCHC	1 cut(s)	1293
SexAI	ACCWGGT	1 cut(s)	1493
SfaNI	GCATC	3 cut(s)	607, 1476, 1587
SfcI	CTRYAG	1 cut(s)	478
SfuI	TTCGAA	1 cut(s)	80
SinI	GGWCC	2 cut(s)	319, 786
SmiMI	CAYNNNNRTG	1 cut(s)	435
SmlI	CTYRAG	1 cut(s)	1169
SmoI	CTYRAG	1 cut(s)	1169
SnaBI	TACGTA	1 cut(s)	214
Sse9I	AATT	7 cut(s)	187, 243, 366, 483, 627, 1420, 1530
SseBI	AGGCCT	1 cut(s)	348
SsiI	CCGC	1 cut(s)	197
SspMI	CTAG	2 cut(s)	141, 1464
StuI	AGGCCT	1 cut(s)	348
StyD4I	CCNGG	4 cut(s)	782, 987, 1163, 1493
StyI	CCWWGG	4 cut(s)	595, 663, 789, 1403
TaaI	ACNGT	9 cut(s)	33, 124, 181, 437, 763, 769, 778, 916, 1179
TaiI	ACGT	3 cut(s)	216, 420, 612
TaqI	TCGA	4 cut(s)	80, 406, 615, 1545
TaqII	GACCGA	1 cut(s)	669
TasI	AATT	7 cut(s)	187, 243, 366, 483, 627, 1420, 1530
TatI	WGTACW	2 cut(s)	1016, 1047
TfiI	GAWTC	6 cut(s)	263, 445, 646, 717, 1084, 1300
Tru1I	TTAA	3 cut(s)	242, 414, 1533
Tru9I	TTAA	3 cut(s)	242, 414, 1533
TscAI	CASTG	4 cut(s)	36, 107, 442, 1477
TseFI	GTSAC	2 cut(s)	890, 916
TseI	GCWGC	4 cut(s)	278, 836, 839, 1325
Tsp45I	GTSAC	2 cut(s)	890, 916
TspDTI	ATGAA	6 cut(s)	63, 276, 370, 867, 1504, 1584
TspGWI	ACGGA	1 cut(s)	1030
TspRI	CASTG	4 cut(s)	36, 107, 442, 1477
Tth111I	GACNNNGTC	1 cut(s)	1139
VpaK11BI	GGWCC	2 cut(s)	319, 786
XapI	RAATTY	1 cut(s)	187
XmiI	GTMKAC	1 cut(s)	390
XspI	CTAG	2 cut(s)	141, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.