Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001666

Physical Location & Seq

Genomic Coordinates Reverse (-)

21574786 .. 21580062

Gene Structure 5277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0210500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGTCGGTGGAGAGGTCCTTCGAGGCTTGGGAGGAGGTGCAGCGTCACGGCCAGGACCTAGCGGATCGTCTGGCGCAGGGTTTCACCGGTCTGATTCAGACCCACATCAATACGCCGTCGTTTCCGTGGCCGAGTTCTCACAATTCGAAGCTGTTCGACCTCGAGTTCCCGAGCCAGAGCTTCGGGAAGAGGGACTTGGTCGGGTTGGTGGCGGAGAACCCCGGAATCAATGGGGTTTCGGCGATTCTGGACATAGGGAACAGGATTGGGCAGGCCGGGGCCGATTTCGGGGCCTGCTTGGATGGGATGGTGCACCAGTTCTTTCGGAGCTTGCCGGTGCCGTTTCGGCACGAGGAGAATTTGGGGCCGTTGATTCGGGTCGATTCGGATAAGGTTAATCTGAGAGCTGATGTGGGTGTGAGTGGTAAGGAGGATTTGGGGCCGTTGGTGAGGGATTCTAGGGGTGTGGAGAGTGATAGTGGCTCTGATGGGTTGGTGGATGAAGAGCTTGCTGGCTTGAATCTAAGGTCTGCTGGGCTTCTGGGTAGACCACAGGGCATCCTAAATACTACAACGACTTATGATAGTAGAACACGGGAGCTAGAAAGCTCTTTGGTTGCAAGGGGAGATTTATGGAGAGTAGAGGCTTCTCAAGGCAGTTCAACATCTAGAAATGGCAATTCGTCACTCTTTCTTGTTCAGCTTGGACCGGTCCTCTTTGTTCGTGATGCGACTCTTCTTTTGCCTGTGCATTTGTCAAAGCAACACTTGCTTTGGTATGGCTATGACAGGAAGAATGGGCTGCATTCTCTCTGTCCGGCAGTGTGGTCAAAACACAGAAGGTGGCTCTTAATGTCAATGCTCTGTCTGAACCCCGTAGCCTGTTCATTTGTTGATTTACAGTTTCCAAATGGGCAATTCACATATGTATCTGGTGAAGGGCTTAGTACAAGTGCTTTCTTACCTCTCTGTGGAGGTCTTCTACAAGCTCAAGGTCAATATCCTGGAGAAATGAGATTCAGTTACTCTCGCAAGAATAAATGGGGAACACGTATCACACCAATGGTACAATGGCCAGACAAGTCTTTTACACTGGGTCTTTCTCAAGCCTTGGCTTGGCAGACATCTGGTCTCATGGTGCGGCCTACACTTCAGTGCAGTTTATTTCCTACGTTGGGTGGAAGCGATCCTGGTTTGCGAGCCGAACTCATTCACTCGGTGAAGGAGCAGCTGAGTCTGATATGTGGATGCGCATTTACAACACATCCTTCTGCTTTTGCTTCAGTAGCTGTTGGCAGATCCAAGTGGAATGGAAATGTTGGGGGCCCTGGTATAGTCTTAAGAGTGGATACTCCACTTACCAATGTTGGTCGACCTTACTTCTCTGTTCAGATAAACAGTGGTATTGAGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003682 GO:0003712 GO:0003714 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006355 GO:0006996 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0030874 GO:0030875 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031491 GO:0031497 GO:0031935 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0034622 GO:0034724 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0044877 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071824 GO:0071840 GO:0080090 GO:0140110 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hira WD40

Protein Analysis

471

Amino Acids

51.4

Weight (kDa)

6.83

Isoelectric Point (pI)

42.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44530 AT3G44530 AT3G44530 AT3G44530
fragaria_vesca	FvH4_3g24580 FvH4_3g24580 FvH4_3g24580 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610
malus_domestica	MD00G1078300.v1.1 MD10G1043400.v1.1
prunus_persica	Prupe.8G049500_v2.0.a1 Prupe.8G049500_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1
pyrus_communis	pycom05g03110 pycom10g03040
rosa_chinensis	RchiOBHm_Chr1g0317731 RchiOBHm_Chr5g0044121
rosa_laevigata	RLG00000030587 RLG00000034243 RLG00000034244
rosa_multiflora	Rmu_sc0000939.1_g000028 Rmu_sc0001158.1_g000004
rosa_roxburghii	Rroxscaffold_1G00036920 Rroxscaffold_4G00330210
rosa_rugosa	Rorug01G0016900.1 Rorug05G0210500 Rorug05G0210600
rosa_samantha	Rh1AG029200 Rh1BG025400 Rh1CG026500 Rh1DG044000 Rh5AG294700 Rh5BG303400 Rh5CG330300 Rh5DG312200
rosa_wichuraiana	Rw0G013170 Rw0G019570 Rw5G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1252
AccB1I	GGYRCC	1 cut(s)	337
AccI	GTMKAC	2 cut(s)	547, 1372
AciI	CCGC	3 cut(s)	62, 212, 1141
AclWI	GGATC	3 cut(s)	72, 1181, 1293
AcoI	YGGCCR	3 cut(s)	49, 128, 1073
AcsI	RAATTY	1 cut(s)	358
AcuI	CTGAAG	2 cut(s)	1136, 1266
AdeI	CACNNNGTG	1 cut(s)	1219
AfaI	GTAC	2 cut(s)	949, 1068
AfiI	CCNNNNNNNGG	4 cut(s)	288, 971, 1116, 1175
AflII	CTTAAG	1 cut(s)	1339
AflIII	ACRYGT	1 cut(s)	1049
AgeI	ACCGGT	2 cut(s)	86, 709
AgsI	TTSAA	2 cut(s)	520, 663
AhdI	GACNNNNNGTC	1 cut(s)	1128
AjnI	CCWGG	4 cut(s)	51, 1003, 1189, 1327
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AleI	CACNNNNGTG	1 cut(s)	1153
Alw21I	GWGCWC	1 cut(s)	315
Alw26I	GTCTC	1 cut(s)	1136
Alw44I	GTGCAC	1 cut(s)	311
AlwI	GGATC	3 cut(s)	72, 1181, 1293
AlwNI	CAGNNNCTG	1 cut(s)	1289
Ama87I	CYCGRG	2 cut(s)	161, 169
ApaI	GGGCCC	1 cut(s)	1328
ApaLI	GTGCAC	1 cut(s)	311
ApeKI	GCWGC	3 cut(s)	40, 802, 1228
ApoI	RAATTY	1 cut(s)	358
ArsI	GACNNNNNNTTYG	2 cut(s)	724, 756
AsiGI	ACCGGT	2 cut(s)	86, 709
Asp700I	GAANNNNTTC	2 cut(s)	152, 1209
AspLEI	GCGC	2 cut(s)	76, 1253
AsuC2I	CCSGG	2 cut(s)	222, 277
AsuHPI	GGTGA	4 cut(s)	76, 460, 947, 1231
AsuII	TTCGAA	1 cut(s)	146
AvaI	CYCGRG	2 cut(s)	161, 169
AvaII	GGWCC	4 cut(s)	15, 55, 707, 712
BaeGI	GKGCMC	2 cut(s)	315, 1328
BaeI	ACNNNNGTAYC	2 cut(s)	912, 945
BalI	TGGCCA	1 cut(s)	1075
BanI	GGYRCC	1 cut(s)	337
BanII	GRGCYC	1 cut(s)	1328
BauI	CACGAG	1 cut(s)	350
BbsI	GAAGAC	1 cut(s)	971
Bbv12I	GWGCWC	1 cut(s)	315
BbvI	GCAGC	3 cut(s)	52, 789, 1240
BccI	CCATC	3 cut(s)	296, 301, 482
BceAI	ACGGC	5 cut(s)	64, 100, 325, 352, 427
BciT130I	CCWGG	4 cut(s)	53, 1005, 1191, 1329
BciVI	GTATCC	1 cut(s)	1342
BcnI	CCSGG	2 cut(s)	222, 277
BcoDI	GTCTC	1 cut(s)	1136
BfaI	CTAG	4 cut(s)	59, 459, 602, 669
BfrI	CTTAAG	1 cut(s)	1339
BfuI	GTATCC	1 cut(s)	1342
BglI	GCCNNNNNGGC	1 cut(s)	346
BisI	GCNGC	4 cut(s)	41, 803, 1142, 1229
BlsI	GCNGC	4 cut(s)	42, 804, 1143, 1230
Bme1390I	CCNGG	6 cut(s)	53, 222, 277, 1005, 1191, 1329
Bme18I	GGWCC	4 cut(s)	15, 55, 707, 712
BmeRI	GACNNNNNGTC	1 cut(s)	1128
BmeT110I	CYCGRG	2 cut(s)	161, 169
BmiI	GGNNCC	7 cut(s)	280, 292, 339, 366, 441, 1325, 1326
BmrFI	CCNGG	6 cut(s)	53, 222, 277, 1005, 1191, 1329
BmrI	ACTGGG	1 cut(s)	1103
BmsI	GCATC	3 cut(s)	567, 718, 1238
BmuI	ACTGGG	1 cut(s)	1103
BpiI	GAAGAC	1 cut(s)	971
BplI	GAGNNNNNCTC	2 cut(s)	1191, 1223
BpmI	CTGGAG	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	146
BpuEI	CTTGAG	3 cut(s)	636, 975, 1089
BpuMI	CCSGG	2 cut(s)	222, 277
BsaAI	YACGTR	1 cut(s)	1052
BsaI	GGTCTC	1 cut(s)	1136
BsaJI	CCNNGG	5 cut(s)	125, 220, 276, 1110, 1327
BsaWI	WCCGGW	2 cut(s)	86, 709
Bsc4I	CCNNNNNNNGG	4 cut(s)	288, 971, 1116, 1175
Bse118I	RCCGGY	3 cut(s)	86, 334, 709
Bse1I	ACTGG	2 cut(s)	316, 1098
BseBI	CCWGG	4 cut(s)	53, 1005, 1191, 1329
BseDI	CCNNGG	5 cut(s)	125, 220, 276, 1110, 1327
BseGI	GGATG	6 cut(s)	307, 312, 505, 558, 1253, 1264
BseLI	CCNNNNNNNGG	4 cut(s)	288, 971, 1116, 1175
BseMII	CTCAG	2 cut(s)	392, 1223
BseNI	ACTGG	2 cut(s)	316, 1098
BseRI	GAGGAG	2 cut(s)	47, 368
BseSI	GKGCMC	2 cut(s)	315, 1328
BseXI	GCAGC	3 cut(s)	52, 789, 1240
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	2 cut(s)	59, 1177
BshNI	GGYRCC	1 cut(s)	337
BshTI	ACCGGT	2 cut(s)	86, 709
BsiHKAI	GWGCWC	1 cut(s)	315
BsiHKCI	CYCGRG	2 cut(s)	161, 169
BsiSI	CCGG	6 cut(s)	87, 222, 276, 335, 710, 818
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	4 cut(s)	288, 971, 1116, 1175
BsmAI	GTCTC	1 cut(s)	1136
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	1 cut(s)	805
Bso31I	GGTCTC	1 cut(s)	1136
BsoBI	CYCGRG	2 cut(s)	161, 169
Bsp119I	TTCGAA	1 cut(s)	146
Bsp120I	GGGCCC	1 cut(s)	1324
Bsp1286I	GDGCHC	2 cut(s)	315, 1328
Bsp143I	GATC	3 cut(s)	64, 1186, 1298
BspACI	CCGC	3 cut(s)	62, 212, 1141
BspCNI	CTCAG	2 cut(s)	393, 1224
BspLI	GGNNCC	7 cut(s)	280, 292, 339, 366, 441, 1325, 1326
BspPI	GGATC	3 cut(s)	72, 1181, 1293
BspQI	GCTCTTC	1 cut(s)	498
BspT104I	TTCGAA	1 cut(s)	146
BspT107I	GGYRCC	1 cut(s)	337
BspTI	CTTAAG	1 cut(s)	1339
BspTNI	GGTCTC	1 cut(s)	1136
BsrFI	RCCGGY	3 cut(s)	86, 334, 709
BsrI	ACTGG	2 cut(s)	316, 1098
BssAI	RCCGGY	3 cut(s)	86, 334, 709
BssECI	CCNNGG	5 cut(s)	125, 220, 276, 1110, 1327
BssMI	GATC	3 cut(s)	64, 1186, 1298
BssSI	CACGAG	1 cut(s)	350
BssT1I	CCWWGG	1 cut(s)	1110
Bst2BI	CACGAG	1 cut(s)	350
Bst2UI	CCWGG	4 cut(s)	53, 1005, 1191, 1329
Bst4CI	ACNGT	2 cut(s)	903, 1400
Bst6I	CTCTTC	3 cut(s)	182, 498, 741
BstAFI	CTTAAG	1 cut(s)	1339
BstAPI	GCANNNNNTGC	1 cut(s)	769
BstBAI	YACGTR	1 cut(s)	1052
BstBI	TTCGAA	1 cut(s)	146
BstC8I	GCNNGC	6 cut(s)	273, 295, 332, 510, 514, 1200
BstDEI	CTNAG	4 cut(s)	401, 524, 944, 1232
BstDSI	CCRYGG	1 cut(s)	125
BstF5I	GGATG	6 cut(s)	307, 312, 505, 558, 1253, 1264
BstHHI	GCGC	2 cut(s)	76, 1253
BstKTI	GATC	3 cut(s)	67, 1189, 1301
BstMAI	GTCTC	1 cut(s)	1136
BstMBI	GATC	3 cut(s)	64, 1186, 1298
BstMWI	GCNNNNNNNGC	3 cut(s)	346, 769, 1286
BstNI	CCWGG	4 cut(s)	53, 1005, 1191, 1329
BstSCI	CCNGG	6 cut(s)	51, 220, 275, 1003, 1189, 1327
BstSLI	GKGCMC	2 cut(s)	315, 1328
BstV1I	GCAGC	3 cut(s)	52, 789, 1240
BstV2I	GAAGAC	1 cut(s)	971
BstX2I	RGATCY	1 cut(s)	1298
BstYI	RGATCY	1 cut(s)	1298
BsuI	GTATCC	1 cut(s)	1342
BtgI	CCRYGG	1 cut(s)	125
BtsCI	GGATG	6 cut(s)	307, 312, 505, 558, 1253, 1264
BtsI	GCAGTG	1 cut(s)	828
BtsIMutI	CAGTG	4 cut(s)	828, 1091, 1160, 1405
Cac8I	GCNNGC	6 cut(s)	273, 295, 332, 510, 514, 1200
CaiI	CAGNNNCTG	1 cut(s)	1289
CfoI	GCGC	2 cut(s)	76, 1253
Cfr10I	RCCGGY	3 cut(s)	86, 334, 709
CseI	GACGC	1 cut(s)	32
Csp6I	GTAC	2 cut(s)	948, 1067
CspAI	ACCGGT	2 cut(s)	86, 709
CviAII	CATG	1 cut(s)	1135
CviQI	GTAC	2 cut(s)	948, 1067
DdeI	CTNAG	4 cut(s)	401, 524, 944, 1232
DpnI	GATC	3 cut(s)	66, 1188, 1300
DpnII	GATC	3 cut(s)	64, 1186, 1298
DraIII	CACNNNGTG	1 cut(s)	1219
DriI	GACNNNNNGTC	1 cut(s)	1128
EaeI	YGGCCR	3 cut(s)	49, 128, 1073
Eam1104I	CTCTTC	3 cut(s)	182, 498, 741
Eam1105I	GACNNNNNGTC	1 cut(s)	1128
EarI	CTCTTC	3 cut(s)	182, 498, 741
EciI	GGCGGA	1 cut(s)	227
Eco130I	CCWWGG	1 cut(s)	1110
Eco24I	GRGCYC	1 cut(s)	1328
Eco31I	GGTCTC	1 cut(s)	1136
Eco47I	GGWCC	4 cut(s)	15, 55, 707, 712
Eco57I	CTGAAG	2 cut(s)	1136, 1266
Eco88I	CYCGRG	2 cut(s)	161, 169
EcoO109I	RGGNCCY	5 cut(s)	15, 55, 291, 1324, 1325
EcoRII	CCWGG	4 cut(s)	51, 1003, 1189, 1327
EcoT14I	CCWWGG	1 cut(s)	1110
EcoT38I	GRGCYC	1 cut(s)	1328
ErhI	CCWWGG	1 cut(s)	1110
FaeI	CATG	1 cut(s)	1138
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 752, 784
FaqI	GGGAC	1 cut(s)	206
FatI	CATG	1 cut(s)	1134
FauNDI	CATATG	1 cut(s)	925
FblI	GTMKAC	2 cut(s)	547, 1372
Fnu4HI	GCNGC	4 cut(s)	41, 803, 1142, 1229
FokI	GGATG	6 cut(s)	314, 319, 512, 545, 1251, 1260
FriOI	GRGCYC	1 cut(s)	1328
Fsp4HI	GCNGC	4 cut(s)	41, 803, 1142, 1229
FspAI	RTGCGCAY	1 cut(s)	1252
FspBI	CTAG	4 cut(s)	59, 459, 602, 669
FspI	TGCGCA	1 cut(s)	1252
GlaI	GCGC	2 cut(s)	75, 1252
GluI	GCNGC	4 cut(s)	41, 803, 1142, 1229
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	1 cut(s)	1026
HapII	CCGG	6 cut(s)	87, 222, 276, 335, 710, 818
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	2 cut(s)	76, 1253
Hin1II	CATG	1 cut(s)	1138
Hin6I	GCGC	2 cut(s)	74, 1251
HinP1I	GCGC	2 cut(s)	74, 1251
HincII	GTYRAC	1 cut(s)	1373
HindII	GTYRAC	1 cut(s)	1373
HpaII	CCGG	6 cut(s)	87, 222, 276, 335, 710, 818
HphI	GGTGA	4 cut(s)	76, 460, 947, 1231
Hpy166II	GTNNAC	3 cut(s)	313, 548, 1373
Hpy188I	TCNGA	9 cut(s)	93, 99, 327, 388, 402, 487, 870, 1239, 1392
Hpy188III	TCNNGA	5 cut(s)	169, 184, 248, 669, 725
Hpy8I	GTNNAC	3 cut(s)	313, 548, 1373
Hpy99I	CGWCG	1 cut(s)	121
HpyAV	CCTTC	5 cut(s)	28, 834, 932, 1216, 1278
HpyCH4III	ACNGT	2 cut(s)	903, 1400
HpyCH4IV	ACGT	2 cut(s)	1051, 1172
HpyCH4V	TGCA	6 cut(s)	40, 313, 620, 751, 805, 1158
HpyF10VI	GCNNNNNNNGC	3 cut(s)	346, 769, 1286
HpyF3I	CTNAG	4 cut(s)	401, 524, 944, 1232
HpySE526I	ACGT	2 cut(s)	1051, 1172
Hsp92II	CATG	1 cut(s)	1138
HspAI	GCGC	2 cut(s)	74, 1251
Kzo9I	GATC	3 cut(s)	64, 1186, 1298
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	3 cut(s)	327, 598, 1225
Lsp1109I	GCAGC	3 cut(s)	52, 789, 1240
LweI	GCATC	3 cut(s)	567, 718, 1238
MaeI	CTAG	4 cut(s)	59, 459, 602, 669
MaeII	ACGT	2 cut(s)	1051, 1172
MaeIII	GTNAC	3 cut(s)	44, 684, 1022
MalI	GATC	3 cut(s)	66, 1188, 1300
MboI	GATC	3 cut(s)	64, 1186, 1298
MboII	GAAGA	5 cut(s)	199, 515, 728, 805, 971
MflI	RGATCY	1 cut(s)	1298
MhlI	GDGCHC	2 cut(s)	315, 1328
MlsI	TGGCCA	1 cut(s)	1075
MluCI	AATT	4 cut(s)	142, 358, 679, 917
MluNI	TGGCCA	1 cut(s)	1075
MlyI	GAGTC	2 cut(s)	727, 1243
Mox20I	TGGCCA	1 cut(s)	1075
MroXI	GAANNNNTTC	2 cut(s)	152, 1209
MscI	TGGCCA	1 cut(s)	1075
MseI	TTAA	4 cut(s)	396, 851, 1340, 1414
MslI	CAYNNNNRTG	2 cut(s)	1061, 1153
Msp20I	TGGCCA	1 cut(s)	1075
MspA1I	CMGCKG	1 cut(s)	1231
MspCI	CTTAAG	1 cut(s)	1339
MspI	CCGG	6 cut(s)	87, 222, 276, 335, 710, 818
MspR9I	CCNGG	6 cut(s)	53, 222, 277, 1005, 1191, 1329
Mva1269I	GAATGC	1 cut(s)	805
MvaI	CCWGG	4 cut(s)	53, 1005, 1191, 1329
MwoI	GCNNNNNNNGC	3 cut(s)	346, 769, 1286
NciI	CCSGG	2 cut(s)	222, 277
NdeI	CATATG	1 cut(s)	925
NdeII	GATC	3 cut(s)	64, 1186, 1298
NlaIII	CATG	1 cut(s)	1138
NlaIV	GGNNCC	7 cut(s)	280, 292, 339, 366, 441, 1325, 1326
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	2 cut(s)	44, 684
NsbI	TGCGCA	1 cut(s)	1252
NspV	TTCGAA	1 cut(s)	146
OliI	CACNNNNGTG	1 cut(s)	1153
PaeR7I	CTCGAG	1 cut(s)	161
PciSI	GCTCTTC	1 cut(s)	498
PctI	GAATGC	1 cut(s)	805
PdmI	GAANNNNTTC	2 cut(s)	152, 1209
PfeI	GAWTC	8 cut(s)	94, 225, 244, 373, 383, 455, 520, 1017
PflFI	GACNNNGTC	1 cut(s)	197
PfoI	TCCNGGA	1 cut(s)	1003
PinAI	ACCGGT	2 cut(s)	86, 709
PkrI	GCNGC	4 cut(s)	42, 804, 1143, 1230
PleI	GAGTC	2 cut(s)	727, 1242
PpsI	GAGTC	2 cut(s)	727, 1242
Ppu21I	YACGTR	1 cut(s)	1052
PpuMI	RGGWCCY	2 cut(s)	15, 55
Psp5II	RGGWCCY	2 cut(s)	15, 55
Psp6I	CCWGG	4 cut(s)	51, 1003, 1189, 1327
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	4 cut(s)	51, 1003, 1189, 1327
PspN4I	GGNNCC	7 cut(s)	280, 292, 339, 366, 441, 1325, 1326
PspOMI	GGGCCC	1 cut(s)	1324
PspPPI	RGGWCCY	2 cut(s)	15, 55
PspXI	VCTCGAGB	1 cut(s)	161
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	1 cut(s)	1298
PsyI	GACNNNGTC	1 cut(s)	197
PvuII	CAGCTG	1 cut(s)	1231
RsaI	GTAC	2 cut(s)	949, 1068
RsaNI	GTAC	2 cut(s)	948, 1067
RseI	CAYNNNNRTG	2 cut(s)	1061, 1153
SalI	GTCGAC	1 cut(s)	1371
SapI	GCTCTTC	1 cut(s)	498
SaqAI	TTAA	4 cut(s)	396, 851, 1340, 1414
SatI	GCNGC	4 cut(s)	41, 803, 1142, 1229
Sau3AI	GATC	3 cut(s)	64, 1186, 1298
SchI	GAGTC	2 cut(s)	727, 1243
ScrFI	CCNGG	6 cut(s)	53, 222, 277, 1005, 1191, 1329
SduI	GDGCHC	2 cut(s)	315, 1328
SfaNI	GCATC	3 cut(s)	567, 718, 1238
Sfr274I	CTCGAG	1 cut(s)	161
SfuI	TTCGAA	1 cut(s)	146
SinI	GGWCC	4 cut(s)	15, 55, 707, 712
SlaI	CTCGAG	1 cut(s)	161
SmiMI	CAYNNNNRTG	2 cut(s)	1061, 1153
SmlI	CTYRAG	5 cut(s)	161, 651, 990, 1104, 1339
SmoI	CTYRAG	5 cut(s)	161, 651, 990, 1104, 1339
Sse9I	AATT	4 cut(s)	142, 358, 679, 917
SsiI	CCGC	3 cut(s)	62, 212, 1141
SspMI	CTAG	4 cut(s)	59, 459, 602, 669
StyD4I	CCNGG	6 cut(s)	51, 220, 275, 1003, 1189, 1327
StyI	CCWWGG	1 cut(s)	1110
TaaI	ACNGT	2 cut(s)	903, 1400
TaiI	ACGT	2 cut(s)	1054, 1175
TaqI	TCGA	6 cut(s)	21, 146, 156, 162, 381, 1372
TasI	AATT	4 cut(s)	142, 358, 679, 917
TatI	WGTACW	1 cut(s)	947
TauI	GCSGC	1 cut(s)	1144
TfiI	GAWTC	8 cut(s)	94, 225, 244, 373, 383, 455, 520, 1017
Tru1I	TTAA	4 cut(s)	396, 851, 1340, 1414
Tru9I	TTAA	4 cut(s)	396, 851, 1340, 1414
TscAI	CASTG	4 cut(s)	828, 1098, 1160, 1405
TseFI	GTSAC	2 cut(s)	44, 684
TseI	GCWGC	3 cut(s)	40, 802, 1228
Tsp45I	GTSAC	2 cut(s)	44, 684
TspDTI	ATGAA	2 cut(s)	516, 876
TspGWI	ACGGA	1 cut(s)	114
TspRI	CASTG	4 cut(s)	828, 1098, 1160, 1405
Tth111I	GACNNNGTC	1 cut(s)	197
Vha464I	CTTAAG	1 cut(s)	1339
VneI	GTGCAC	1 cut(s)	311
VpaK11BI	GGWCC	4 cut(s)	15, 55, 707, 712
XapI	RAATTY	1 cut(s)	358
XbaI	TCTAGA	1 cut(s)	668
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1068
XhoI	CTCGAG	1 cut(s)	161
XmiI	GTMKAC	2 cut(s)	547, 1372
XmnI	GAANNNNTTC	2 cut(s)	152, 1209
XspI	CTAG	4 cut(s)	59, 459, 602, 669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.