Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001666

Physical Location & Seq

Genomic Coordinates Reverse (-)

21602499 .. 21606164

Gene Structure 3666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0210600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGACGTCAGGCACGCGGCTGCCGAGCTGGAAGGAGAGAGAGAACAACAAGAGGAGGGAGAGAAGGCGAAGGGCTATAGCGGCGAAGATCTTCGCCGGACTCAGAATGTACGGCAACTTTAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAAGCTCTCTGTAACGAGGCCGGTTGGAACGTCGAGCTCGACGGCACCACGTACCGCAAGGGATGCAAGCCTGTTGAACGCAAGGACATTGTGGACGGATCAACAGCTGCTAGCCCATGCTCATCTTACCACCCAAGTAACTATGCTTCCTACAATCCAAGCCCTGGCTCATCCTCCTTCCCTAGCCCAGCATCATCTTCCTATGCTGCTAATCAGAATGTTGATGGAAGTTCCCTTATCCCATGGCTAAAACATCTGTCATCCGGATCCTCTTCAGCCTCCTCTTCCAAGCTACCAAATATTTACATCCATGGTGGTTCTATCAGTGCTCCTGTCACTCCTCCATTGAGCTCTCCAACTGCCAGAACACCCCGAATGAACACGGACTGGGACGAACAGTCTGCCCGCCCAGAATGGGGTGGGCAGCAGTACTCCTTCCTGCCATCTTCTACTCCACCAAGCCCTGGCCGGCAGATTATTCCTGATCCCGAATGGTTTTCTGGGCTTCGGATTCCCCATGGACCAACTTCTCCAACATTTAGCCTCGTCTCTTCAAACCCATTTGGGTTCAGGGAAGAGGCTTTAGCTGGTGGAGGCTCTCGAATGTGGACTCCTGGACAGAGTGGGACATGCTCTCCTGCCATTGCAGCAGGCTCTGATCACACTGCGGACATTTCAATGTCTGAGGTGATTTCTGACGAGTTTGCATTCGGATCATGCAACACAGCAGGGCTGGTTAAGGCATGGGAAGGCGAGAGGATTCATGAAGAATCCGGATCTGATGATTTAGAGCTCACTCTTGGGTGCTCAAAAACCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003682 GO:0003712 GO:0003714 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006355 GO:0006996 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0030874 GO:0030875 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031491 GO:0031497 GO:0031935 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0034622 GO:0034724 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0044877 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071824 GO:0071840 GO:0080090 GO:0140110 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hira WD40

Protein Analysis

325

Amino Acids

34.98

Weight (kDa)

7.62

Isoelectric Point (pI)

58.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	4 - 138	1.3e-59	BES1/BZR1 plant transcription factor, N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44530 AT3G44530 AT3G44530 AT3G44530
fragaria_vesca	FvH4_3g24580 FvH4_3g24580 FvH4_3g24580 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610 FvH4_7g01610
malus_domestica	MD00G1078300.v1.1 MD10G1043400.v1.1
prunus_persica	Prupe.8G049500_v2.0.a1 Prupe.8G049500_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1 Prupe.8G049600_v2.0.a1
pyrus_communis	pycom05g03110 pycom10g03040
rosa_chinensis	RchiOBHm_Chr1g0317731 RchiOBHm_Chr5g0044121
rosa_laevigata	RLG00000030587 RLG00000034243 RLG00000034244
rosa_multiflora	Rmu_sc0000939.1_g000028 Rmu_sc0001158.1_g000004
rosa_roxburghii	Rroxscaffold_1G00036920 Rroxscaffold_4G00330210
rosa_rugosa	Rorug01G0016900.1 Rorug05G0210500 Rorug05G0210600
rosa_samantha	Rh1AG029200 Rh1BG025400 Rh1CG026500 Rh1DG044000 Rh5AG294700 Rh5BG303400 Rh5CG330300 Rh5DG312200
rosa_wichuraiana	Rw0G013170 Rw0G019570 Rw5G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	1 cut(s)	200
AccB7I	CCANNNNNTGG	2 cut(s)	320, 620
AccII	CGCG	1 cut(s)	16
AccIII	TCCGGA	2 cut(s)	419, 929
AciI	CCGC	5 cut(s)	16, 80, 211, 562, 824
AclWI	GGATC	6 cut(s)	262, 417, 430, 635, 877, 940
AcoI	YGGCCR	1 cut(s)	622
AcuI	CTGAAG	1 cut(s)	414
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	110, 209, 587
AfiI	CCNNNNNNNGG	4 cut(s)	320, 571, 572, 620
AgsI	TTSAA	3 cut(s)	233, 711, 834
AhdI	GACNNNNNGTC	1 cut(s)	553
AjnI	CCWGG	4 cut(s)	319, 619, 769, 971
AluBI	AGCT	9 cut(s)	27, 124, 161, 193, 263, 448, 507, 743, 949
AluI	AGCT	9 cut(s)	27, 124, 161, 193, 263, 448, 507, 743, 949
Alw21I	GWGCWC	5 cut(s)	195, 487, 509, 951, 965
Alw26I	GTCTC	1 cut(s)	709
AlwI	GGATC	6 cut(s)	262, 417, 430, 635, 877, 940
AlwNI	CAGNNNCTG	1 cut(s)	812
Aor13HI	TCCGGA	2 cut(s)	419, 929
AoxI	GGCC	2 cut(s)	174, 622
ApeKI	GCWGC	5 cut(s)	19, 263, 362, 580, 803
Asp700I	GAANNNNTTC	1 cut(s)	89
AspS9I	GGNCC	2 cut(s)	151, 677
AsuHPI	GGTGA	1 cut(s)	856
AsuNHI	GCTAGC	1 cut(s)	266
AvaII	GGWCC	2 cut(s)	151, 677
BamHI	GGATCC	1 cut(s)	422
BanI	GGYRCC	1 cut(s)	200
BanII	GRGCYC	3 cut(s)	195, 509, 951
BarI	GAAGNNNNNNTAC	2 cut(s)	286, 318
Bbv12I	GWGCWC	5 cut(s)	195, 487, 509, 951, 965
BbvI	GCAGC	5 cut(s)	6, 250, 349, 592, 815
BccI	CCATC	2 cut(s)	374, 607
BceAI	ACGGC	2 cut(s)	127, 214
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	4 cut(s)	321, 621, 771, 973
BclI	TGATCA	1 cut(s)	814
BcoDI	GTCTC	1 cut(s)	709
BfaI	CTAG	2 cut(s)	267, 339
BfmI	CTRYAG	1 cut(s)	75
BglII	AGATCT	1 cut(s)	87
BisI	GCNGC	7 cut(s)	17, 20, 81, 264, 363, 581, 804
BlsI	GCNGC	7 cut(s)	18, 21, 82, 265, 364, 582, 805
BmcAI	AGTACT	1 cut(s)	587
Bme1390I	CCNGG	4 cut(s)	321, 621, 771, 973
Bme18I	GGWCC	2 cut(s)	151, 677
BmeRI	GACNNNNNGTC	1 cut(s)	553
BmgT120I	GGNCC	2 cut(s)	151, 677
BmiI	GGNNCC	2 cut(s)	202, 424
BmrFI	CCNGG	4 cut(s)	321, 621, 771, 973
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	2 cut(s)	209, 356
BmtI	GCTAGC	1 cut(s)	270
BmuI	ACTGGG	1 cut(s)	553
BsaAI	YACGTR	1 cut(s)	207
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	5 cut(s)	319, 398, 466, 619, 673
BsaWI	WCCGGW	2 cut(s)	419, 929
BsaXI	ACNNNNNCTCC	2 cut(s)	775, 805
Bsc4I	CCNNNNNNNGG	4 cut(s)	320, 571, 572, 620
Bse118I	RCCGGY	2 cut(s)	176, 624
Bse1I	ACTGG	1 cut(s)	548
Bse3DI	GCAATG	1 cut(s)	798
BseAI	TCCGGA	2 cut(s)	419, 929
BseBI	CCWGG	4 cut(s)	321, 621, 771, 973
BseDI	CCNNGG	5 cut(s)	319, 398, 466, 619, 673
BseGI	GGATG	4 cut(s)	224, 326, 416, 462
BseLI	CCNNNNNNNGG	4 cut(s)	320, 571, 572, 620
BseMI	GCAATG	1 cut(s)	798
BseMII	CTCAG	2 cut(s)	115, 831
BseNI	ACTGG	1 cut(s)	548
BseRI	GAGGAG	3 cut(s)	67, 427, 486
BseXI	GCAGC	5 cut(s)	6, 250, 349, 592, 815
BseYI	CCCAGC	1 cut(s)	343
Bsh1236I	CGCG	1 cut(s)	16
BshFI	GGCC	2 cut(s)	176, 624
BshNI	GGYRCC	1 cut(s)	200
BsiHKAI	GWGCWC	5 cut(s)	195, 487, 509, 951, 965
BsiSI	CCGG	5 cut(s)	96, 177, 420, 625, 930
BslFI	GGGAC	2 cut(s)	560, 796
BslI	CCNNNNNNNGG	4 cut(s)	320, 571, 572, 620
BsmAI	GTCTC	1 cut(s)	709
BsmBI	CGTCTC	1 cut(s)	709
BsmFI	GGGAC	2 cut(s)	560, 796
BsmI	GAATGC	1 cut(s)	863
BsnI	GGCC	2 cut(s)	176, 624
Bsp1286I	GDGCHC	5 cut(s)	195, 487, 509, 951, 965
Bsp13I	TCCGGA	2 cut(s)	419, 929
Bsp143I	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
Bsp19I	CCATGG	3 cut(s)	398, 466, 673
BspACI	CCGC	5 cut(s)	16, 80, 211, 562, 824
BspANI	GGCC	2 cut(s)	176, 624
BspCNI	CTCAG	2 cut(s)	114, 832
BspEI	TCCGGA	2 cut(s)	419, 929
BspFNI	CGCG	1 cut(s)	16
BspHI	TCATGA	1 cut(s)	919
BspLI	GGNNCC	2 cut(s)	202, 424
BspOI	GCTAGC	1 cut(s)	270
BspPI	GGATC	6 cut(s)	262, 417, 430, 635, 877, 940
BspT107I	GGYRCC	1 cut(s)	200
BsrDI	GCAATG	1 cut(s)	798
BsrFI	RCCGGY	2 cut(s)	176, 624
BsrI	ACTGG	1 cut(s)	548
BssAI	RCCGGY	2 cut(s)	176, 624
BssECI	CCNNGG	5 cut(s)	319, 398, 466, 619, 673
BssMI	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	3 cut(s)	398, 466, 673
Bst2UI	CCWGG	4 cut(s)	321, 621, 771, 973
Bst4CI	ACNGT	1 cut(s)	555
Bst6I	CTCTTC	4 cut(s)	433, 445, 712, 726
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstBAI	YACGTR	1 cut(s)	207
BstC8I	GCNNGC	6 cut(s)	14, 224, 268, 562, 626, 808
BstDEI	CTNAG	2 cut(s)	101, 840
BstDSI	CCRYGG	3 cut(s)	398, 466, 673
BstF5I	GGATG	4 cut(s)	224, 326, 416, 462
BstFNI	CGCG	1 cut(s)	16
BstKTI	GATC	7 cut(s)	90, 257, 425, 643, 817, 872, 935
BstMAI	GTCTC	1 cut(s)	709
BstMBI	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
BstMWI	GCNNNNNNNGC	4 cut(s)	80, 130, 219, 803
BstNI	CCWGG	4 cut(s)	321, 621, 771, 973
BstNSI	RCATGY	1 cut(s)	789
BstSCI	CCNGG	4 cut(s)	319, 619, 769, 971
BstSFI	CTRYAG	1 cut(s)	75
BstUI	CGCG	1 cut(s)	16
BstV1I	GCAGC	5 cut(s)	6, 250, 349, 592, 815
BstX2I	RGATCY	3 cut(s)	87, 422, 932
BstYI	RGATCY	3 cut(s)	87, 422, 932
BsuRI	GGCC	2 cut(s)	176, 624
BtgI	CCRYGG	3 cut(s)	398, 466, 673
BtsCI	GGATG	4 cut(s)	224, 326, 416, 462
BtsI	GCAGTG	2 cut(s)	133, 819
BtsIMutI	CAGTG	3 cut(s)	133, 487, 819
Cac8I	GCNNGC	6 cut(s)	14, 224, 268, 562, 626, 808
CaiI	CAGNNNCTG	1 cut(s)	812
CciI	TCATGA	1 cut(s)	919
Cfr10I	RCCGGY	2 cut(s)	176, 624
Cfr13I	GGNCC	2 cut(s)	151, 677
CsiI	ACCWGGT	1 cut(s)	971
Csp6I	GTAC	3 cut(s)	109, 208, 586
CviAII	CATG	8 cut(s)	273, 399, 467, 674, 786, 873, 900, 920
CviQI	GTAC	3 cut(s)	109, 208, 586
DdeI	CTNAG	2 cut(s)	101, 840
DpnI	GATC	7 cut(s)	89, 256, 424, 642, 816, 871, 934
DpnII	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
DriI	GACNNNNNGTC	1 cut(s)	553
EaeI	YGGCCR	1 cut(s)	622
Eam1104I	CTCTTC	4 cut(s)	433, 445, 712, 726
Eam1105I	GACNNNNNGTC	1 cut(s)	553
EarI	CTCTTC	4 cut(s)	433, 445, 712, 726
Ecl136II	GAGCTC	3 cut(s)	193, 507, 949
Eco130I	CCWWGG	3 cut(s)	398, 466, 673
Eco24I	GRGCYC	3 cut(s)	195, 509, 951
Eco47I	GGWCC	2 cut(s)	151, 677
Eco53kI	GAGCTC	3 cut(s)	193, 507, 949
Eco57I	CTGAAG	1 cut(s)	414
EcoICRI	GAGCTC	3 cut(s)	193, 507, 949
EcoO109I	RGGNCCY	1 cut(s)	151
EcoRII	CCWGG	4 cut(s)	319, 619, 769, 971
EcoT14I	CCWWGG	3 cut(s)	398, 466, 673
EcoT38I	GRGCYC	3 cut(s)	195, 509, 951
ErhI	CCWWGG	3 cut(s)	398, 466, 673
Esp3I	CGTCTC	1 cut(s)	709
FaeI	CATG	8 cut(s)	276, 402, 470, 677, 789, 876, 903, 923
FaqI	GGGAC	2 cut(s)	560, 796
FatI	CATG	8 cut(s)	272, 398, 466, 673, 785, 872, 899, 919
FauI	CCCGC	1 cut(s)	569
FbaI	TGATCA	1 cut(s)	814
Fnu4HI	GCNGC	7 cut(s)	17, 20, 81, 264, 363, 581, 804
FokI	GGATG	4 cut(s)	231, 313, 403, 449
FriOI	GRGCYC	3 cut(s)	195, 509, 951
Fsp4HI	GCNGC	7 cut(s)	17, 20, 81, 264, 363, 581, 804
FspBI	CTAG	2 cut(s)	267, 339
GluI	GCNGC	7 cut(s)	17, 20, 81, 264, 363, 581, 804
GsaI	CCCAGC	1 cut(s)	347
HaeIII	GGCC	2 cut(s)	176, 624
HapII	CCGG	5 cut(s)	96, 177, 420, 625, 930
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	8 cut(s)	276, 402, 470, 677, 789, 876, 903, 923
HinfI	GANTC	5 cut(s)	99, 667, 766, 916, 926
HpaII	CCGG	5 cut(s)	96, 177, 420, 625, 930
HphI	GGTGA	1 cut(s)	856
Hpy166II	GTNNAC	2 cut(s)	250, 765
Hpy188I	TCNGA	8 cut(s)	104, 372, 666, 814, 841, 853, 869, 937
Hpy188III	TCNNGA	6 cut(s)	420, 638, 644, 756, 920, 930
Hpy8I	GTNNAC	2 cut(s)	250, 765
Hpy99I	CGWCG	2 cut(s)	191, 200
HpyAV	CCTTC	6 cut(s)	25, 57, 63, 343, 601, 899
HpyCH4III	ACNGT	1 cut(s)	555
HpyCH4IV	ACGT	3 cut(s)	5, 186, 206
HpyCH4V	TGCA	4 cut(s)	222, 803, 863, 876
HpyF10VI	GCNNNNNNNGC	4 cut(s)	80, 130, 219, 803
HpyF3I	CTNAG	2 cut(s)	101, 840
HpySE526I	ACGT	3 cut(s)	5, 186, 206
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	8 cut(s)	276, 402, 470, 677, 789, 876, 903, 923
Kpn2I	TCCGGA	2 cut(s)	419, 929
KroI	GCCGGC	1 cut(s)	624
KroNI	GCCGGC	1 cut(s)	626
Ksp22I	TGATCA	1 cut(s)	814
Kzo9I	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
LmnI	GCTCC	2 cut(s)	129, 490
Lsp1109I	GCAGC	5 cut(s)	6, 250, 349, 592, 815
LweI	GCATC	2 cut(s)	209, 356
MabI	ACCWGGT	1 cut(s)	971
MaeI	CTAG	2 cut(s)	267, 339
MaeII	ACGT	3 cut(s)	5, 186, 206
MaeIII	GTNAC	3 cut(s)	167, 293, 490
MalI	GATC	7 cut(s)	89, 256, 424, 642, 816, 871, 934
MboI	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
MboII	GAAGA	9 cut(s)	82, 97, 345, 420, 432, 594, 699, 743, 935
MflI	RGATCY	3 cut(s)	87, 422, 932
MhlI	GDGCHC	5 cut(s)	195, 487, 509, 951, 965
MlyI	GAGTC	2 cut(s)	93, 760
MmeI	TCCRAC	3 cut(s)	161, 536, 713
MroI	TCCGGA	2 cut(s)	419, 929
MroNI	GCCGGC	1 cut(s)	624
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	2 cut(s)	120, 894
MslI	CAYNNNNRTG	1 cut(s)	833
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	5 cut(s)	96, 177, 420, 625, 930
MspR9I	CCNGG	4 cut(s)	321, 621, 771, 973
Mva1269I	GAATGC	1 cut(s)	863
MvaI	CCWGG	4 cut(s)	321, 621, 771, 973
MvnI	CGCG	1 cut(s)	16
MwoI	GCNNNNNNNGC	4 cut(s)	80, 130, 219, 803
NaeI	GCCGGC	1 cut(s)	626
NcoI	CCATGG	3 cut(s)	398, 466, 673
NdeII	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
NgoMIV	GCCGGC	1 cut(s)	624
NheI	GCTAGC	1 cut(s)	266
NlaIII	CATG	8 cut(s)	276, 402, 470, 677, 789, 876, 903, 923
NlaIV	GGNNCC	2 cut(s)	202, 424
NmeAIII	GCCGAG	1 cut(s)	48
NmuCI	GTSAC	1 cut(s)	490
NspI	RCATGY	1 cut(s)	789
PagI	TCATGA	1 cut(s)	919
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 192
PctI	GAATGC	1 cut(s)	863
PdiI	GCCGGC	1 cut(s)	626
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	3 cut(s)	667, 916, 926
PflMI	CCANNNNNTGG	2 cut(s)	320, 620
PfoI	TCCNGGA	1 cut(s)	769
PkrI	GCNGC	7 cut(s)	18, 21, 82, 265, 364, 582, 805
PleI	GAGTC	2 cut(s)	93, 760
PpsI	GAGTC	2 cut(s)	93, 760
Ppu21I	YACGTR	1 cut(s)	207
PpuMI	RGGWCCY	1 cut(s)	151
Psp124BI	GAGCTC	3 cut(s)	195, 509, 951
Psp5II	RGGWCCY	1 cut(s)	151
Psp6I	CCWGG	4 cut(s)	319, 619, 769, 971
PspFI	CCCAGC	1 cut(s)	343
PspGI	CCWGG	4 cut(s)	319, 619, 769, 971
PspN4I	GGNNCC	2 cut(s)	202, 424
PspPI	GGNCC	2 cut(s)	151, 677
PspPPI	RGGWCCY	1 cut(s)	151
PstNI	CAGNNNCTG	1 cut(s)	812
PsuI	RGATCY	3 cut(s)	87, 422, 932
PvuII	CAGCTG	1 cut(s)	263
RsaI	GTAC	3 cut(s)	110, 209, 587
RsaNI	GTAC	3 cut(s)	109, 208, 586
RseI	CAYNNNNRTG	1 cut(s)	833
SacI	GAGCTC	3 cut(s)	195, 509, 951
SaqAI	TTAA	2 cut(s)	120, 894
SatI	GCNGC	7 cut(s)	17, 20, 81, 264, 363, 581, 804
Sau3AI	GATC	7 cut(s)	87, 254, 422, 640, 814, 869, 932
Sau96I	GGNCC	2 cut(s)	151, 677
ScaI	AGTACT	1 cut(s)	587
SchI	GAGTC	2 cut(s)	93, 760
ScrFI	CCNGG	4 cut(s)	321, 621, 771, 973
SduI	GDGCHC	5 cut(s)	195, 487, 509, 951, 965
SexAI	ACCWGGT	1 cut(s)	971
SfaNI	GCATC	2 cut(s)	209, 356
SfcI	CTRYAG	1 cut(s)	75
SinI	GGWCC	2 cut(s)	151, 677
SmiMI	CAYNNNNRTG	1 cut(s)	833
SsiI	CCGC	5 cut(s)	16, 80, 211, 562, 824
SspI	AATATT	1 cut(s)	457
SspMI	CTAG	2 cut(s)	267, 339
SstI	GAGCTC	3 cut(s)	195, 509, 951
StyD4I	CCNGG	4 cut(s)	319, 619, 769, 971
StyI	CCWWGG	3 cut(s)	398, 466, 673
TaaI	ACNGT	1 cut(s)	555
TaiI	ACGT	3 cut(s)	8, 189, 209
TaqI	TCGA	3 cut(s)	189, 195, 757
TatI	WGTACW	1 cut(s)	585
TauI	GCSGC	2 cut(s)	19, 83
TfiI	GAWTC	3 cut(s)	667, 916, 926
Tru1I	TTAA	2 cut(s)	120, 894
Tru9I	TTAA	2 cut(s)	120, 894
TscAI	CASTG	3 cut(s)	140, 487, 826
TseFI	GTSAC	1 cut(s)	490
TseI	GCWGC	5 cut(s)	19, 263, 362, 580, 803
Tsp45I	GTSAC	1 cut(s)	490
TspDTI	ATGAA	3 cut(s)	548, 908, 936
TspGWI	ACGGA	2 cut(s)	267, 554
TspRI	CASTG	3 cut(s)	140, 487, 826
Van91I	CCANNNNNTGG	2 cut(s)	320, 620
VpaK11BI	GGWCC	2 cut(s)	151, 677
XceI	RCATGY	1 cut(s)	789
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	2 cut(s)	267, 339
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.