Lamin-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27035 |
| fragaria_vesca | FvH4_6g27830 FvH4_6g47772 |
| malus_domestica | MD11G1182000.v1.1 MD15G1314400.v1.1 MD17G1054300.v1.1 |
| prunus_persica | Prupe.3G261800_v2.0.a1 Prupe.6G154600_v2.0.a1 Prupe.6G154700_v2.0.a1 |
| pyrus_communis | pycom17g05200 |
| rosa_chinensis | RchiOBHm_Chr2g0166951 RchiOBHm_Chr5g0049891 |
| rosa_laevigata | RLG00000021683 RLG00000034660 |
| rosa_multiflora | Rmu_sc0002735.1_g000023 Rmu_sc0008387.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00031480 Rroxscaffold_2G00083920 |
| rosa_rugosa | Rorug02G0526800 Rorug05G0253600 |
| rosa_samantha | Rh2AG593700 Rh2BG605200 Rh2CG576100 Rh2DG616700 Rh5BG339000 Rh5DG351400 |
| rosa_wichuraiana | Rw2G049430 Rw5G031020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 184 |
| AclWI | GGATC | 2 cut(s) | 22, 471 |
| AcsI | RAATTY | 3 cut(s) | 205, 331, 368 |
| AfaI | GTAC | 2 cut(s) | 193, 414 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 183, 514 |
| AflII | CTTAAG | 1 cut(s) | 70 |
| AgsI | TTSAA | 1 cut(s) | 294 |
| AjnI | CCWGG | 1 cut(s) | 95 |
| AluBI | AGCT | 2 cut(s) | 36, 322 |
| AluI | AGCT | 2 cut(s) | 36, 322 |
| Alw21I | GWGCWC | 3 cut(s) | 79, 255, 460 |
| Alw26I | GTCTC | 1 cut(s) | 91 |
| AlwI | GGATC | 2 cut(s) | 22, 471 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 2 cut(s) | 143, 529 |
| ApoI | RAATTY | 3 cut(s) | 205, 331, 368 |
| AspS9I | GGNCC | 1 cut(s) | 174 |
| AsuHPI | GGTGA | 2 cut(s) | 308, 497 |
| AsuII | TTCGAA | 1 cut(s) | 209 |
| BbsI | GAAGAC | 1 cut(s) | 47 |
| Bbv12I | GWGCWC | 3 cut(s) | 79, 255, 460 |
| BbvI | GCAGC | 2 cut(s) | 155, 516 |
| BccI | CCATC | 4 cut(s) | 15, 122, 133, 160 |
| BciT130I | CCWGG | 1 cut(s) | 97 |
| BcoDI | GTCTC | 1 cut(s) | 91 |
| BfrI | CTTAAG | 1 cut(s) | 70 |
| BisI | GCNGC | 3 cut(s) | 144, 185, 530 |
| BlsI | GCNGC | 3 cut(s) | 145, 186, 531 |
| Bme1390I | CCNGG | 1 cut(s) | 97 |
| BmgT120I | GGNCC | 1 cut(s) | 174 |
| BmiI | GGNNCC | 1 cut(s) | 94 |
| BmrFI | CCNGG | 1 cut(s) | 97 |
| BmsI | GCATC | 5 cut(s) | 23, 90, 155, 248, 366 |
| BpiI | GAAGAC | 1 cut(s) | 47 |
| BpmI | CTGGAG | 1 cut(s) | 79 |
| Bpu10I | CCTNAGC | 1 cut(s) | 78 |
| Bpu14I | TTCGAA | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 1 cut(s) | 170 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 183, 514 |
| Bse1I | ACTGG | 2 cut(s) | 352, 390 |
| BseBI | CCWGG | 1 cut(s) | 97 |
| BseDI | CCNNGG | 1 cut(s) | 170 |
| BseGI | GGATG | 4 cut(s) | 105, 144, 146, 324 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 183, 514 |
| BseMII | CTCAG | 2 cut(s) | 92, 268 |
| BseNI | ACTGG | 2 cut(s) | 352, 390 |
| BseXI | GCAGC | 2 cut(s) | 155, 516 |
| BsgI | GTGCAG | 1 cut(s) | 452 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BsiHKAI | GWGCWC | 3 cut(s) | 79, 255, 460 |
| BslFI | GGGAC | 1 cut(s) | 145 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 183, 514 |
| BsmAI | GTCTC | 1 cut(s) | 91 |
| BsmFI | GGGAC | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp119I | TTCGAA | 1 cut(s) | 209 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 255, 460 |
| Bsp143I | GATC | 2 cut(s) | 27, 476 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 2 cut(s) | 91, 267 |
| BspLI | GGNNCC | 1 cut(s) | 94 |
| BspPI | GGATC | 2 cut(s) | 22, 471 |
| BspT104I | TTCGAA | 1 cut(s) | 209 |
| BspTI | CTTAAG | 1 cut(s) | 70 |
| BsrI | ACTGG | 2 cut(s) | 352, 390 |
| BssECI | CCNNGG | 1 cut(s) | 170 |
| BssMI | GATC | 2 cut(s) | 27, 476 |
| Bst2UI | CCWGG | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 1 cut(s) | 423 |
| BstAFI | CTTAAG | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 250 |
| BstBI | TTCGAA | 1 cut(s) | 209 |
| BstC8I | GCNNGC | 1 cut(s) | 396 |
| BstDEI | CTNAG | 2 cut(s) | 78, 254 |
| BstF5I | GGATG | 4 cut(s) | 105, 144, 146, 324 |
| BstKTI | GATC | 2 cut(s) | 30, 479 |
| BstMAI | GTCTC | 1 cut(s) | 91 |
| BstMBI | GATC | 2 cut(s) | 27, 476 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 181, 250 |
| BstNI | CCWGG | 1 cut(s) | 97 |
| BstSCI | CCNGG | 1 cut(s) | 95 |
| BstV1I | GCAGC | 2 cut(s) | 155, 516 |
| BstV2I | GAAGAC | 1 cut(s) | 47 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsCI | GGATG | 4 cut(s) | 105, 144, 146, 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 174 |
| Csp6I | GTAC | 2 cut(s) | 192, 413 |
| CviAII | CATG | 1 cut(s) | 472 |
| CviJI | RGCY | 5 cut(s) | 36, 83, 93, 175, 322 |
| CviKI_1 | RGCY | 5 cut(s) | 36, 83, 93, 175, 322 |
| CviQI | GTAC | 2 cut(s) | 192, 413 |
| DdeI | CTNAG | 2 cut(s) | 78, 254 |
| DpnI | GATC | 2 cut(s) | 29, 478 |
| DpnII | GATC | 2 cut(s) | 27, 476 |
| EcoRI | GAATTC | 2 cut(s) | 205, 331 |
| EcoRII | CCWGG | 1 cut(s) | 95 |
| FaeI | CATG | 1 cut(s) | 475 |
| FaiI | YATR | 9 cut(s) | 33, 51, 107, 273, 275, 337, 466, 468, 473 |
| FaqI | GGGAC | 1 cut(s) | 145 |
| FatI | CATG | 1 cut(s) | 471 |
| FauNDI | CATATG | 1 cut(s) | 273 |
| Fnu4HI | GCNGC | 3 cut(s) | 144, 185, 530 |
| FokI | GGATG | 4 cut(s) | 112, 133, 151, 311 |
| Fsp4HI | GCNGC | 3 cut(s) | 144, 185, 530 |
| GluI | GCNGC | 3 cut(s) | 144, 185, 530 |
| GsuI | CTGGAG | 1 cut(s) | 79 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 1 cut(s) | 475 |
| HinfI | GANTC | 2 cut(s) | 211, 264 |
| HphI | GGTGA | 2 cut(s) | 308, 497 |
| Hpy188I | TCNGA | 2 cut(s) | 123, 257 |
| Hpy188III | TCNNGA | 3 cut(s) | 197, 328, 373 |
| Hpy99I | CGWCG | 1 cut(s) | 410 |
| HpyCH4III | ACNGT | 1 cut(s) | 423 |
| HpyCH4IV | ACGT | 1 cut(s) | 408 |
| HpyCH4V | TGCA | 5 cut(s) | 49, 244, 261, 345, 433 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 181, 250 |
| HpyF3I | CTNAG | 2 cut(s) | 78, 254 |
| HpySE526I | ACGT | 1 cut(s) | 408 |
| Hsp92II | CATG | 1 cut(s) | 475 |
| Kzo9I | GATC | 2 cut(s) | 27, 476 |
| LmnI | GCTCC | 1 cut(s) | 98 |
| Lsp1109I | GCAGC | 2 cut(s) | 155, 516 |
| LweI | GCATC | 5 cut(s) | 23, 90, 155, 248, 366 |
| MaeII | ACGT | 1 cut(s) | 408 |
| MalI | GATC | 2 cut(s) | 29, 478 |
| MboI | GATC | 2 cut(s) | 27, 476 |
| MboII | GAAGA | 3 cut(s) | 33, 47, 302 |
| MhlI | GDGCHC | 3 cut(s) | 79, 255, 460 |
| MluCI | AATT | 3 cut(s) | 205, 331, 368 |
| MlyI | GAGTC | 1 cut(s) | 273 |
| MnlI | CCTC | 3 cut(s) | 180, 324, 395 |
| MseI | TTAA | 4 cut(s) | 71, 237, 425, 447 |
| MspCI | CTTAAG | 1 cut(s) | 70 |
| MspR9I | CCNGG | 1 cut(s) | 97 |
| MvaI | CCWGG | 1 cut(s) | 97 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 181, 250 |
| NdeI | CATATG | 1 cut(s) | 273 |
| NdeII | GATC | 2 cut(s) | 27, 476 |
| NlaIII | CATG | 1 cut(s) | 475 |
| NlaIV | GGNNCC | 1 cut(s) | 94 |
| NmeAIII | GCCGAG | 1 cut(s) | 151 |
| NspV | TTCGAA | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 211 |
| PfoI | TCCNGGA | 1 cut(s) | 95 |
| PkrI | GCNGC | 3 cut(s) | 145, 186, 531 |
| PleI | GAGTC | 1 cut(s) | 272 |
| PpsI | GAGTC | 1 cut(s) | 272 |
| Psp6I | CCWGG | 1 cut(s) | 95 |
| PspGI | CCWGG | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 94 |
| PspPI | GGNCC | 1 cut(s) | 174 |
| RsaI | GTAC | 2 cut(s) | 193, 414 |
| RsaNI | GTAC | 2 cut(s) | 192, 413 |
| SaqAI | TTAA | 4 cut(s) | 71, 237, 425, 447 |
| SatI | GCNGC | 3 cut(s) | 144, 185, 530 |
| Sau3AI | GATC | 2 cut(s) | 27, 476 |
| Sau96I | GGNCC | 1 cut(s) | 174 |
| SchI | GAGTC | 1 cut(s) | 273 |
| ScrFI | CCNGG | 1 cut(s) | 97 |
| SduI | GDGCHC | 3 cut(s) | 79, 255, 460 |
| SetI | ASST | 6 cut(s) | 38, 324, 411, 455, 500, 510 |
| SfaNI | GCATC | 5 cut(s) | 23, 90, 155, 248, 366 |
| SfuI | TTCGAA | 1 cut(s) | 209 |
| SmlI | CTYRAG | 1 cut(s) | 70 |
| SmoI | CTYRAG | 1 cut(s) | 70 |
| Sse9I | AATT | 3 cut(s) | 205, 331, 368 |
| SsiI | CCGC | 1 cut(s) | 184 |
| SspI | AATATT | 1 cut(s) | 485 |
| StyD4I | CCNGG | 1 cut(s) | 95 |
| TaaI | ACNGT | 1 cut(s) | 423 |
| TaiI | ACGT | 1 cut(s) | 411 |
| TaqI | TCGA | 3 cut(s) | 10, 26, 209 |
| TasI | AATT | 3 cut(s) | 205, 331, 368 |
| TauI | GCSGC | 1 cut(s) | 187 |
| TfiI | GAWTC | 1 cut(s) | 211 |
| Tru1I | TTAA | 4 cut(s) | 71, 237, 425, 447 |
| Tru9I | TTAA | 4 cut(s) | 71, 237, 425, 447 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TseI | GCWGC | 2 cut(s) | 143, 529 |
| TspDTI | ATGAA | 2 cut(s) | 290, 324 |
| TspRI | CASTG | 1 cut(s) | 24 |
| Vha464I | CTTAAG | 1 cut(s) | 70 |
| XapI | RAATTY | 3 cut(s) | 205, 331, 368 |