Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008863

Physical Location & Seq

Genomic Coordinates Reverse (-)

73069248 .. 73070882

Gene Structure 1635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0542500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGCTGCTGTTGCTCCTCCATCTCTTCCCAACCAGAACAAGTTACCATCCTTCTCGTCGAGAATTCCGGCTGGAATGCCGGCCCCCGTCGTTTTGCTTCAAATGTGCAGCAATTTTCAAGAAGTAAGACAAGTTCATGCTCAATTGGTTGTATCAGGACTAATTGCGCGCCCTATAAATGGTGGGAGGCTTCTTCAGGCCTATGTCACAGTGTCAAACTTTAACTATGCATTATCAACTTTTGATAGCATATCTAATCCTGATGTGTTTGCCTACAATACCATGATGAGGGGTTTAATACTGGGTAAGTCCCCTTATCTTGCACTGAAGCTCTATAGTAGGCTTTTACTAGATGGTTTAAAACCAGACAATTACACCTACACCTTTGTTCTCAAAGCATGTTCCCAAGTGAATGCGCTCTTCGAAGGTAGAGAAGTGCATGGCCGGATAATTAAGGCCGGAATAGCACCAGATACTTACATTCATAGTTCACTGATAAACATGTACTCGAGTTCATCAGATGGTTTGGTCTGTGCAGAGCGAGTTTTAGCTGGCTTTTCCGAGGATAACACACTTGCTAAGAACTCCTTGATTTCGGGTTACCTCAGTCAGGGTCAGGTAGAAAGTGCTAGAAAAATGTTCGATAACCTGGTAGCAAAGGATGATGCATCTTGGAGTGCAATGGTAGCAGGGTACACAAAGAATGGTATGTATGCAGAAGCATTAGTCATCTTTCGAAAGATGTTGAGTTCTCAAGTTTCTCCAAATGAATCAGCACTTGTGAGCTCATTGTGTGCTTGTGCTAATTTGGGAGCACTAGACCAAGGCAAATGGATACATGCATACATTGATAGAATTGGGGCTAGGATTAGTGTCACTGTGGGTACTGCTCTTATAGACATGTATGCAAAGTGTGGCAGCATAGAAAATGCCTATGAAGTTTTCAGGAAGATGCCACAGAAAGACGTAGTTTCATGGGGAGCTATCATATCTGGTTTCGCCATTCATGGGCGAGCTGTAAAATGTTTCGAACTGTTTGATGATATGGTTGCTGGTGGAATTCACCCAAATGAAGTAATTTTTGTAGGTATTTTATCAGCTTGTTCTCATGCCGGGTATGTTGAAACGGGATACAAGTATTTTGACCAAATGGTTCGTCTTTATGGGATTAAACCATCCACTGAACATTATGGATGCATGGTGGATCTTCTTGGTCGTGCAGGGCGGCTGGCAGAGGCGGAAAAGCTCATCACGTCAATGCCGGAAGAGCCTAATTCAGTTATATGGGGTGCATTTCTTGGTGCTTGTAGAATGCACAGTGACGTGAGGAGAGGGAACCTGGCTTTCAAGCACTTGACTGATCTTGAGCCAACGTCTGGTGACAGATACAAACTTGCAGGGATTATGTTTGCTAATGCTGGGGAAAAGGAAAATGCTACTAAAATTAGGAAGATCATCACAGATAATGACTTGGAGACAACTCGTGGAGTAAGCTCAATTGAGATAGATGGTGTAGTCCACGAGTTTGTAGCAGGTACCATCAACCATAGCAGGCACAAAGAAATTTACAGAATGTGGGAGAGGGTTAATAGGTTATTAGAAATCCATGAGCTTGAAATTTGCATTCCATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03430 map03430

Pfam Domains

Protein Families

XPG_I XPG_N

Protein Analysis

544

Amino Acids

59.81

Weight (kDa)

7.2

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	87 - 135	2e-09	PPR repeat family
PPR	PF01535	224 - 251	5.9e-06	PPR repeat
PPR_2	PF13041	321 - 368	2.4e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008863)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g36910 FvH4_6g02530 FvH4_7g04680
rosa_laevigata	RLG00000009071 RLG00000026067
rosa_multiflora	Rmu_sc0001753.1_g000028 Rmu_sc0005139.1_g000010 Rmu_sc0014419.1_g000003 Rmu_sc0014419.1_g000004
rosa_roxburghii	Rroxscaffold_4G00276940 Rroxscaffold_5G00387150 Rroxscaffold_7G00212230
rosa_rugosa	Rorug05G0542500
rosa_samantha	Rh1BG428500 Rh1CG440900 Rh1DG461300 Rh4BG445000 Rh4BG445100 Rh4CG462300 Rh4CG462400 Rh6CG048900 Rh6DG044600
rosa_wichuraiana	Rw4G037290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1523
Acc65I	GGTACC	1 cut(s)	1535
AccB1I	GGYRCC	1 cut(s)	1535
AccB7I	CCANNNNNTGG	1 cut(s)	1376
AccII	CGCG	1 cut(s)	169
AciI	CCGC	2 cut(s)	1225, 1238
AclWI	GGATC	1 cut(s)	1212
AcoI	YGGCCR	1 cut(s)	442
AcsI	RAATTY	4 cut(s)	63, 1059, 1563, 1617
AcuI	CTGAAG	2 cut(s)	179, 347
AfaI	GTAC	4 cut(s)	506, 695, 886, 1537
AfiI	CCNNNNNNNGG	5 cut(s)	179, 288, 610, 1008, 1376
AflIII	ACRYGT	2 cut(s)	501, 900
AgsI	TTSAA	5 cut(s)	101, 119, 1124, 1348, 1616
AjiI	CACGTC	2 cut(s)	1254, 1324
AjnI	CCWGG	2 cut(s)	648, 1338
AluBI	AGCT	9 cut(s)	331, 551, 786, 983, 1016, 1100, 1246, 1494, 1612
AluI	AGCT	9 cut(s)	331, 551, 786, 983, 1016, 1100, 1246, 1494, 1612
Alw21I	GWGCWC	2 cut(s)	788, 817
Alw26I	GTCTC	1 cut(s)	1469
AlwI	GGATC	1 cut(s)	1212
Ama87I	CYCGRG	1 cut(s)	508
AoxI	GGCC	4 cut(s)	81, 198, 442, 456
ApeKI	GCWGC	3 cut(s)	5, 108, 918
ApoI	RAATTY	4 cut(s)	63, 1059, 1563, 1617
ArsI	GACNNNNNNTTYG	2 cut(s)	1141, 1173
Asp718I	GGTACC	1 cut(s)	1535
AspLEI	GCGC	3 cut(s)	169, 171, 418
AspS9I	GGNCC	1 cut(s)	82
AsuC2I	CCSGG	1 cut(s)	1114
AsuHPI	GGTGA	2 cut(s)	1055, 1391
AsuII	TTCGAA	3 cut(s)	423, 736, 1029
AvaI	CYCGRG	1 cut(s)	508
BanI	GGYRCC	1 cut(s)	1535
BanII	GRGCYC	1 cut(s)	788
BauI	CACGAG	2 cut(s)	1482, 1520
Bbv12I	GWGCWC	2 cut(s)	788, 817
BbvI	GCAGC	2 cut(s)	120, 930
BccI	CCATC	7 cut(s)	28, 55, 347, 515, 1183, 1502, 1547
BciT130I	CCWGG	2 cut(s)	650, 1340
BciVI	GTATCC	2 cut(s)	828, 1124
BcnI	CCSGG	1 cut(s)	1114
BcoDI	GTCTC	1 cut(s)	1469
BfaI	CTAG	5 cut(s)	350, 630, 818, 864, 1633
BfmI	CTRYAG	1 cut(s)	334
BfuAI	ACCTGC	1 cut(s)	1523
BfuI	GTATCC	2 cut(s)	828, 1124
BisI	GCNGC	4 cut(s)	6, 109, 919, 1226
BlsI	GCNGC	4 cut(s)	7, 110, 920, 1227
Bme1390I	CCNGG	3 cut(s)	650, 1114, 1340
BmeT110I	CYCGRG	1 cut(s)	508
BmgBI	CACGTC	2 cut(s)	1254, 1324
BmgT120I	GGNCC	1 cut(s)	82
BmiI	GGNNCC	3 cut(s)	84, 1337, 1537
BmrFI	CCNGG	3 cut(s)	650, 1114, 1340
BmrI	ACTGGG	1 cut(s)	311
BmsI	GCATC	4 cut(s)	655, 677, 942, 1184
BmuI	ACTGGG	1 cut(s)	311
Bpu14I	TTCGAA	3 cut(s)	423, 736, 1029
BpuEI	CTTGAG	2 cut(s)	738, 1385
BpuMI	CCSGG	1 cut(s)	1114
BsaJI	CCNNGG	2 cut(s)	561, 823
Bsc4I	CCNNNNNNNGG	5 cut(s)	179, 288, 610, 1008, 1376
Bse118I	RCCGGY	1 cut(s)	79
Bse1I	ACTGG	1 cut(s)	306
Bse3DI	GCAATG	1 cut(s)	687
BseBI	CCWGG	2 cut(s)	650, 1340
BseDI	CCNNGG	2 cut(s)	561, 823
BseGI	GGATG	4 cut(s)	47, 667, 1175, 1199
BseLI	CCNNNNNNNGG	5 cut(s)	179, 288, 610, 1008, 1376
BseMI	GCAATG	1 cut(s)	687
BseMII	CTCAG	1 cut(s)	619
BseNI	ACTGG	1 cut(s)	306
BsePI	GCGCGC	1 cut(s)	167
BseRI	GAGGAG	2 cut(s)	6, 1342
BseXI	GCAGC	2 cut(s)	120, 930
BseYI	CCCAGC	1 cut(s)	1418
BsgI	GTGCAG	3 cut(s)	127, 555, 1239
Bsh1236I	CGCG	1 cut(s)	169
BshFI	GGCC	4 cut(s)	83, 200, 444, 458
BshNI	GGYRCC	1 cut(s)	1535
BsiHKAI	GWGCWC	2 cut(s)	788, 817
BsiHKCI	CYCGRG	1 cut(s)	508
BsiSI	CCGG	6 cut(s)	68, 80, 445, 459, 1113, 1262
BslFI	GGGAC	1 cut(s)	295
BslI	CCNNNNNNNGG	5 cut(s)	179, 288, 610, 1008, 1376
BsmAI	GTCTC	1 cut(s)	1469
BsmFI	GGGAC	1 cut(s)	295
BsmI	GAATGC	4 cut(s)	81, 418, 1317, 1623
BsnI	GGCC	4 cut(s)	83, 200, 444, 458
BsoBI	CYCGRG	1 cut(s)	508
Bsp119I	TTCGAA	3 cut(s)	423, 736, 1029
Bsp1286I	GDGCHC	2 cut(s)	788, 817
Bsp143I	GATC	3 cut(s)	1204, 1360, 1452
BspACI	CCGC	2 cut(s)	1225, 1238
BspANI	GGCC	4 cut(s)	83, 200, 444, 458
BspCNI	CTCAG	1 cut(s)	618
BspFNI	CGCG	1 cut(s)	169
BspLI	GGNNCC	3 cut(s)	84, 1337, 1537
BspMI	ACCTGC	1 cut(s)	1523
BspPI	GGATC	1 cut(s)	1212
BspQI	GCTCTTC	2 cut(s)	425, 1260
BspT104I	TTCGAA	3 cut(s)	423, 736, 1029
BspT107I	GGYRCC	1 cut(s)	1535
BsrDI	GCAATG	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	79
BsrI	ACTGG	1 cut(s)	306
BssAI	RCCGGY	1 cut(s)	79
BssECI	CCNNGG	2 cut(s)	561, 823
BssHII	GCGCGC	1 cut(s)	167
BssMI	GATC	3 cut(s)	1204, 1360, 1452
BssSI	CACGAG	2 cut(s)	1482, 1520
BssT1I	CCWWGG	1 cut(s)	823
Bst2BI	CACGAG	2 cut(s)	1482, 1520
Bst2UI	CCWGG	2 cut(s)	650, 1340
Bst4CI	ACNGT	4 cut(s)	211, 880, 1035, 1319
Bst6I	CTCTTC	3 cut(s)	30, 425, 1260
BstBI	TTCGAA	3 cut(s)	423, 736, 1029
BstC8I	GCNNGC	6 cut(s)	81, 169, 553, 1014, 1230, 1553
BstDEI	CTNAG	2 cut(s)	579, 605
BstEII	GGTNACC	1 cut(s)	599
BstENI	CCTNNNNNAGG	1 cut(s)	608
BstF5I	GGATG	4 cut(s)	47, 667, 1175, 1199
BstFNI	CGCG	1 cut(s)	169
BstHHI	GCGC	3 cut(s)	169, 171, 418
BstKTI	GATC	3 cut(s)	1207, 1363, 1455
BstMAI	GTCTC	1 cut(s)	1469
BstMBI	GATC	3 cut(s)	1204, 1360, 1452
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 464, 686, 1267
BstNI	CCWGG	2 cut(s)	650, 1340
BstNSI	RCATGY	4 cut(s)	402, 505, 842, 904
BstPI	GGTNACC	1 cut(s)	599
BstSCI	CCNGG	3 cut(s)	648, 1112, 1338
BstSFI	CTRYAG	1 cut(s)	334
BstUI	CGCG	1 cut(s)	169
BstV1I	GCAGC	2 cut(s)	120, 930
BstX2I	RGATCY	1 cut(s)	1204
BstYI	RGATCY	1 cut(s)	1204
BsuI	GTATCC	2 cut(s)	828, 1124
BsuRI	GGCC	4 cut(s)	83, 200, 444, 458
BtrI	CACGTC	2 cut(s)	1254, 1324
BtsCI	GGATG	4 cut(s)	47, 667, 1175, 1199
BtsIMutI	CAGTG	6 cut(s)	216, 323, 491, 876, 1179, 1324
BveI	ACCTGC	1 cut(s)	1523
Cac8I	GCNNGC	6 cut(s)	81, 169, 553, 1014, 1230, 1553
CfoI	GCGC	3 cut(s)	169, 171, 418
Cfr10I	RCCGGY	1 cut(s)	79
Cfr13I	GGNCC	1 cut(s)	82
CsiI	ACCWGGT	1 cut(s)	648
Csp6I	GTAC	4 cut(s)	505, 694, 885, 1536
CviQI	GTAC	4 cut(s)	505, 694, 885, 1536
DdeI	CTNAG	2 cut(s)	579, 605
DpnI	GATC	3 cut(s)	1206, 1362, 1454
DpnII	GATC	3 cut(s)	1204, 1360, 1452
DraI	TTTAAA	1 cut(s)	360
EaeI	YGGCCR	1 cut(s)	442
Eam1104I	CTCTTC	3 cut(s)	30, 425, 1260
EarI	CTCTTC	3 cut(s)	30, 425, 1260
EciI	GGCGGA	1 cut(s)	1253
Ecl136II	GAGCTC	1 cut(s)	786
Eco130I	CCWWGG	1 cut(s)	823
Eco147I	AGGCCT	1 cut(s)	200
Eco24I	GRGCYC	1 cut(s)	788
Eco53kI	GAGCTC	1 cut(s)	786
Eco57I	CTGAAG	2 cut(s)	179, 347
Eco88I	CYCGRG	1 cut(s)	508
Eco91I	GGTNACC	1 cut(s)	599
EcoICRI	GAGCTC	1 cut(s)	786
EcoNI	CCTNNNNNAGG	1 cut(s)	608
EcoO65I	GGTNACC	1 cut(s)	599
EcoRI	GAATTC	2 cut(s)	63, 1059
EcoRII	CCWGG	2 cut(s)	648, 1338
EcoT14I	CCWWGG	1 cut(s)	823
EcoT22I	ATGCAT	4 cut(s)	232, 670, 844, 1199
EcoT38I	GRGCYC	1 cut(s)	788
ErhI	CCWWGG	1 cut(s)	823
FalI	AAGNNNNNCTT	2 cut(s)	572, 604
FaqI	GGGAC	1 cut(s)	295
Fnu4HI	GCNGC	4 cut(s)	6, 109, 919, 1226
FokI	GGATG	4 cut(s)	34, 674, 1162, 1206
FriOI	GRGCYC	1 cut(s)	788
Fsp4HI	GCNGC	4 cut(s)	6, 109, 919, 1226
FspBI	CTAG	5 cut(s)	350, 630, 818, 864, 1633
GlaI	GCGC	3 cut(s)	168, 170, 417
GluI	GCNGC	4 cut(s)	6, 109, 919, 1226
GsaI	CCCAGC	1 cut(s)	1422
HaeIII	GGCC	4 cut(s)	83, 200, 444, 458
HapII	CCGG	6 cut(s)	68, 80, 445, 459, 1113, 1262
HhaI	GCGC	3 cut(s)	169, 171, 418
Hin6I	GCGC	3 cut(s)	167, 169, 416
HinP1I	GCGC	3 cut(s)	167, 169, 416
HinfI	GANTC	1 cut(s)	770
HpaII	CCGG	6 cut(s)	68, 80, 445, 459, 1113, 1262
HphI	GGTGA	2 cut(s)	1055, 1391
Hpy166II	GTNNAC	3 cut(s)	491, 696, 1519
Hpy188I	TCNGA	2 cut(s)	520, 562
Hpy188III	TCNNGA	6 cut(s)	60, 119, 156, 260, 946, 1364
Hpy8I	GTNNAC	3 cut(s)	491, 696, 1519
Hpy99I	CGWCG	2 cut(s)	61, 92
HpyAV	CCTTC	2 cut(s)	61, 419
HpyCH4III	ACNGT	4 cut(s)	211, 880, 1035, 1319
HpyCH4IV	ACGT	4 cut(s)	966, 1253, 1323, 1373
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 464, 686, 1267
HpyF3I	CTNAG	2 cut(s)	579, 605
HpySE526I	ACGT	4 cut(s)	966, 1253, 1323, 1373
HspAI	GCGC	3 cut(s)	167, 169, 416
KpnI	GGTACC	1 cut(s)	1539
KroI	GCCGGC	1 cut(s)	79
KroNI	GCCGGC	1 cut(s)	81
Kzo9I	GATC	3 cut(s)	1204, 1360, 1452
LguI	GCTCTTC	2 cut(s)	425, 1260
LmnI	GCTCC	3 cut(s)	19, 812, 980
Lsp1109I	GCAGC	2 cut(s)	120, 930
LweI	GCATC	4 cut(s)	655, 677, 942, 1184
MabI	ACCWGGT	1 cut(s)	648
MaeI	CTAG	5 cut(s)	350, 630, 818, 864, 1633
MaeII	ACGT	4 cut(s)	966, 1253, 1323, 1373
MaeIII	GTNAC	6 cut(s)	42, 205, 599, 874, 1319, 1379
MalI	GATC	3 cut(s)	1206, 1362, 1454
MboI	GATC	3 cut(s)	1204, 1360, 1452
MboII	GAAGA	7 cut(s)	17, 185, 412, 961, 1199, 1277, 1462
MfeI	CAATTG	2 cut(s)	143, 1497
MflI	RGATCY	1 cut(s)	1204
MhlI	GDGCHC	2 cut(s)	788, 817
MnlI	CCTC	9 cut(s)	27, 180, 282, 556, 614, 1228, 1320, 1325, 1575
Mph1103I	ATGCAT	4 cut(s)	232, 670, 844, 1199
MroNI	GCCGGC	1 cut(s)	79
MseI	TTAA	6 cut(s)	222, 296, 359, 453, 1170, 1587
MslI	CAYNNNNRTG	2 cut(s)	1068, 1256
MspI	CCGG	6 cut(s)	68, 80, 445, 459, 1113, 1262
MspR9I	CCNGG	3 cut(s)	650, 1114, 1340
MunI	CAATTG	2 cut(s)	143, 1497
Mva1269I	GAATGC	4 cut(s)	81, 418, 1317, 1623
MvaI	CCWGG	2 cut(s)	650, 1340
MvnI	CGCG	1 cut(s)	169
MwoI	GCNNNNNNNGC	4 cut(s)	11, 464, 686, 1267
NaeI	GCCGGC	1 cut(s)	81
NciI	CCSGG	1 cut(s)	1114
NdeII	GATC	3 cut(s)	1204, 1360, 1452
NgoMIV	GCCGGC	1 cut(s)	79
NlaIV	GGNNCC	3 cut(s)	84, 1337, 1537
NmuCI	GTSAC	4 cut(s)	205, 874, 1319, 1379
NsiI	ATGCAT	4 cut(s)	232, 670, 844, 1199
NspI	RCATGY	4 cut(s)	402, 505, 842, 904
NspV	TTCGAA	3 cut(s)	423, 736, 1029
PaeR7I	CTCGAG	1 cut(s)	508
PauI	GCGCGC	1 cut(s)	167
PceI	AGGCCT	1 cut(s)	200
PciI	ACATGT	2 cut(s)	501, 900
PciSI	GCTCTTC	2 cut(s)	425, 1260
PctI	GAATGC	4 cut(s)	81, 418, 1317, 1623
PdiI	GCCGGC	1 cut(s)	81
PfeI	GAWTC	1 cut(s)	770
PflMI	CCANNNNNTGG	1 cut(s)	1376
PkrI	GCNGC	4 cut(s)	7, 110, 920, 1227
PscI	ACATGT	2 cut(s)	501, 900
Psp124BI	GAGCTC	1 cut(s)	788
Psp6I	CCWGG	2 cut(s)	648, 1338
PspEI	GGTNACC	1 cut(s)	599
PspFI	CCCAGC	1 cut(s)	1418
PspGI	CCWGG	2 cut(s)	648, 1338
PspN4I	GGNNCC	3 cut(s)	84, 1337, 1537
PspPI	GGNCC	1 cut(s)	82
PspXI	VCTCGAGB	1 cut(s)	508
PsrI	GAACNNNNNNTAC	2 cut(s)	117, 149
PsuI	RGATCY	1 cut(s)	1204
PteI	GCGCGC	1 cut(s)	167
RsaI	GTAC	4 cut(s)	506, 695, 886, 1537
RsaNI	GTAC	4 cut(s)	505, 694, 885, 1536
RseI	CAYNNNNRTG	2 cut(s)	1068, 1256
SacI	GAGCTC	1 cut(s)	788
SapI	GCTCTTC	2 cut(s)	425, 1260
SaqAI	TTAA	6 cut(s)	222, 296, 359, 453, 1170, 1587
SatI	GCNGC	4 cut(s)	6, 109, 919, 1226
Sau3AI	GATC	3 cut(s)	1204, 1360, 1452
Sau96I	GGNCC	1 cut(s)	82
ScrFI	CCNGG	3 cut(s)	650, 1114, 1340
SduI	GDGCHC	2 cut(s)	788, 817
SexAI	ACCWGGT	1 cut(s)	648
SfaNI	GCATC	4 cut(s)	655, 677, 942, 1184
SfcI	CTRYAG	1 cut(s)	334
Sfr274I	CTCGAG	1 cut(s)	508
SfuI	TTCGAA	3 cut(s)	423, 736, 1029
SlaI	CTCGAG	1 cut(s)	508
SmiMI	CAYNNNNRTG	2 cut(s)	1068, 1256
SmlI	CTYRAG	3 cut(s)	508, 753, 1364
SmoI	CTYRAG	3 cut(s)	508, 753, 1364
SseBI	AGGCCT	1 cut(s)	200
SsiI	CCGC	2 cut(s)	1225, 1238
SspMI	CTAG	5 cut(s)	350, 630, 818, 864, 1633
SstI	GAGCTC	1 cut(s)	788
StuI	AGGCCT	1 cut(s)	200
StyD4I	CCNGG	3 cut(s)	648, 1112, 1338
StyI	CCWWGG	1 cut(s)	823
TaaI	ACNGT	4 cut(s)	211, 880, 1035, 1319
TaiI	ACGT	4 cut(s)	969, 1256, 1326, 1376
TaqI	TCGA	6 cut(s)	59, 423, 509, 642, 736, 1029
TatI	WGTACW	1 cut(s)	504
TauI	GCSGC	1 cut(s)	1228
TfiI	GAWTC	1 cut(s)	770
Tru1I	TTAA	6 cut(s)	222, 296, 359, 453, 1170, 1587
Tru9I	TTAA	6 cut(s)	222, 296, 359, 453, 1170, 1587
TscAI	CASTG	6 cut(s)	216, 330, 498, 883, 1186, 1324
TseFI	GTSAC	4 cut(s)	205, 874, 1319, 1379
TseI	GCWGC	3 cut(s)	5, 108, 918
Tsp45I	GTSAC	4 cut(s)	205, 874, 1319, 1379
TspDTI	ATGAA	8 cut(s)	125, 473, 504, 783, 951, 963, 995, 1086
TspRI	CASTG	6 cut(s)	216, 330, 498, 883, 1186, 1324
Van91I	CCANNNNNTGG	1 cut(s)	1376
XagI	CCTNNNNNAGG	1 cut(s)	608
XapI	RAATTY	4 cut(s)	63, 1059, 1563, 1617
XceI	RCATGY	4 cut(s)	402, 505, 842, 904
XhoI	CTCGAG	1 cut(s)	508
XspI	CTAG	5 cut(s)	350, 630, 818, 864, 1633
Zsp2I	ATGCAT	4 cut(s)	232, 670, 844, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.