Rorug05G0554900

Peptidase of plants and bacteria

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003578
Physical Location & Seq
Reverse (-)
74316365 .. 74323214
6850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0554900.1

Sequence Viewer

Length: 2250 bp
ATGACAGTCTCTGTCGAAGGTCCAGACTCTCGAGCAACTATTCCTGGTGGGACAAGGATCGACGTCCTTGATGATGAGTTCAACGACAGCCCAATTGAGCAAGTGAGGCTAACAGTTCCGATCACCGACGACCCTTCAGTTCCCGCCTTAACCTTTCGTACGTGGGTTCTAGGCCTTTTGTCATGCTGCACTCTTGCCTTTTTGAACCAGTTCTTTGGTTACCGCCAAAACCAGCTCTACATTTCTTCAGTCTCAGCACAAATCCTCGTCCTCCCTCTCGGAAAACTGATGGCTAAAACTCTCCCAACAAAACAATTCCGAGTTATGGGATGGACATTTTCGTTCAACCCCGGACCTTTCAACTTGAAAGAGCATGTGTTGATCACCATCTTTGCGAATTCAGGATCAAATAGTGTTTATGCAGTTGGCATTATCACTATTGTGAAGGCTTTCTACCGCAGGAGCATGCATCCTATGGCAGCCTTCTTGTTAGCCCAAAGCACTCAATTGCTTGGATATGGGTGGGCTGGGTTGTTCAGAAAGTACCTTGTTGATTCCCCATATATGTGGTGGCCTGACAATCTGGTTCAGGTCTCTCTTTTCAGGGCGCTTCATGAATGGGAAATGAGACCAAAGGGAGGCCGTACTAGGCTGCAGTACTTCAGCTTAGTATTTGTATGCAGCTTCGCTTACTACATTATTCCAAGTTTTTTCTTCCCCTCCATAGGCGCTCTCTCCTTTGTTTGTTGGATATGGAAGGACTCCGTCACCGCCCAACAGATTGGTTCCGGCCTCAATGGCCTTGGCATTGGCTCATTTGGCCTTGATTGGTCAACTGTTGCGAGCTTCTTGAAGAGCCCATTAGCCACACCCGGTTTTGTCTTCATGAACATGTTGGCTGGTTTTGTCTTCATTTTCTACATTCTTACCCCCATTTTTTATTGGTCCAATGTAAAAGATGCCAAGAAGTTTCCCTTCTTTTCTTCTTCTACTTTCGACTCCACTGGCAAACGCTATAATGTTTCCCGAGTTCTGGACCAGAAAACTTTCGATATTAATTTGAAAGAGTATAACAGTTACAGTAAACTCCATCTCTCTATGTACTTTGCCTCGAGTTATGGGTGGAGCTTTGCTGGTCTGACAGCAACTATTTCACATGTTGCACTCTTCCATGGAAAAGACATCTGGGATATGTGGAAAAAGACTTCTACCGCAGCGAAAGATCAGCTTGGGGACATCCACACACGGTTGATGAAGAAGAACTACGAGGCAGTCCCACAATGGTGGTTTCACATCATGCTTGTTTTAATGGTTGGCCTTTCCATCTGGGTCTGTGAAGGTTTTGGGAAACAGCTCCAACTTCCATGGTGGGGAGTCTTACTAGCTTGTGCCATTGCACTAACTTTCACCTTACCCATTGGCATTATTCAAGCCACAACAAACATGCAACCGGGGCTCAATGTGATCACAGAGTTGGTTATTGGGTATCTTTATCCTGGGAAGCCTCTTGCCAATGTGACTTTCAAAACATATGGCTATATCAGCATGTCACAAGCACTCATGTTTCTCGGTGACTTCAAATTAGGTCACTATATGAAGATCCCTCCCAAGTCCATGTTTATTGCGCAGTTAGCTGGAACACTGGTCGCTTCTAGTACCTTTTTCAGCACATCCTGGTGGCTTCTCAACACTGTTGAGAACATCTGTGATCCATCAAAACTGCCAGAGGGAAGTCCATGGACATGTCCTAGTGATGAGGTCTTCTACAATGCCTCAATCATTTGGGGAGTTATAGGCCCTCTCAGAATGTTCACTAAGCATGGAAACTACCCGGAGATGAATTGGTTCTTCCTACTTGGTTTACTTGCACCTATACCAGTTTGGCTCCTAGCGCGCAAATTCCCCAAGCTAGAGTGGATTAAGCTCATAAACATGCCTGTCATCATTGGAACCACAGCAGTCATGCCACCAGCTAAAGCTGTCCACTACTTGATGTGGTTCACAGTTGGAATTTTCTTTAGCTTCTATGTTTATCGACAACACAGGGCATGGTGGGCTAGGCATAACTATATCCTATCAGCTGCTTTGGATGCCGGTGTGGCCTTCACGGCAGTTCTTGTGTATTTCACCCTTCAGAGTAAGGGTATTAATGGTCCAAAATGGTGGGGTCAGGACAGTACTGATCATTGTCCGTTAGCCAAGTGCCCCACAGCTCCAGGAGTAGTGGTCAAAGGGTGTCCAGTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSP

Protein Analysis

749

Amino Acids

84.55

Weight (kDa)

9.28

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 50 - 709 4e-163 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
Acc16I TGCGCA 1 cut(s) 1626
AccII CGCG 1 cut(s) 1894
AciI CCGC 5 cut(s) 144, 223, 457, 771, 1212
AclWI GGATC 4 cut(s) 65, 412, 1594, 1703
AcsI RAATTY 3 cut(s) 397, 1898, 2010
AcuI CTGAAG 4 cut(s) 120, 231, 646, 2117
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 7 cut(s) 160, 545, 646, 659, 1103, 1657, 2179
AfiI CCNNNNNNNGG 5 cut(s) 325, 638, 725, 1033, 1370
AflIII ACRYGT 3 cut(s) 891, 1156, 1742
AjnI CCWGG 4 cut(s) 43, 1495, 1673, 2215
AjuI GAANNNNNNNTTGG 2 cut(s) 1505, 1537
AleI CACNNNNGTG 2 cut(s) 440, 1282
Alw26I GTCTC 4 cut(s) 13, 256, 598, 622
AlwI GGATC 4 cut(s) 65, 412, 1594, 1703
AlwNI CAGNNNCTG 1 cut(s) 11
Ama87I CYCGRG 3 cut(s) 30, 1026, 1111
AoxI GGCC 9 cut(s) 172, 572, 640, 790, 799, 820, 1315, 1795, 2100
ApeKI GCWGC 6 cut(s) 186, 479, 652, 681, 1214, 2081
ApoI RAATTY 3 cut(s) 397, 1898, 2010
AseI ATTAAT 2 cut(s) 1056, 2148
Asp700I GAANNNNTTC 4 cut(s) 209, 449, 1046, 1844
AspLEI GCGC 5 cut(s) 610, 731, 1627, 1894, 1896
AspS9I GGNCC 6 cut(s) 20, 353, 945, 1036, 1796, 2153
AsuC2I CCSGG 4 cut(s) 351, 873, 1452, 1832
AsuHPI GGTGA 6 cut(s) 115, 376, 760, 1399, 1583, 2119
AvaI CYCGRG 3 cut(s) 30, 1026, 1111
AvaII GGWCC 5 cut(s) 20, 353, 945, 1036, 2153
BaeGI GKGCMC 1 cut(s) 2207
BanII GRGCYC 2 cut(s) 860, 1458
BarI GAAGNNNNNNTAC 4 cut(s) 437, 469, 1247, 1279
BbsI GAAGAC 3 cut(s) 874, 901, 1753
BbvI GCAGC 6 cut(s) 173, 491, 639, 693, 1226, 2068
BccI CCATC 6 cut(s) 283, 324, 395, 1098, 1331, 1720
BceAI ACGGC 2 cut(s) 627, 2124
BciT130I CCWGG 4 cut(s) 45, 1497, 1675, 2217
BclI TGATCA 3 cut(s) 381, 1464, 2182
BcnI CCSGG 4 cut(s) 351, 873, 1452, 1832
BcoDI GTCTC 4 cut(s) 13, 256, 598, 622
BfaI CTAG 8 cut(s) 170, 648, 1382, 1653, 1749, 1889, 1910, 2058
BfmI CTRYAG 1 cut(s) 653
BfoI RGCGCY 2 cut(s) 611, 732
BglI GCCNNNNNGGC 3 cut(s) 798, 2099, 2108
BisI GCNGC 6 cut(s) 187, 480, 653, 682, 1215, 2082
BlsI GCNGC 6 cut(s) 188, 481, 654, 683, 1216, 2083
BmcAI AGTACT 2 cut(s) 659, 2179
Bme1390I CCNGG 8 cut(s) 45, 351, 873, 1452, 1497, 1675, 1832, 2217
Bme18I GGWCC 5 cut(s) 20, 353, 945, 1036, 2153
BmeT110I CYCGRG 3 cut(s) 30, 1026, 1111
BmgT120I GGNCC 6 cut(s) 20, 353, 945, 1036, 1796, 2153
BmiI GGNNCC 3 cut(s) 787, 1886, 1951
BmrFI CCNGG 8 cut(s) 45, 351, 873, 1452, 1497, 1675, 1832, 2217
BmsI GCATC 3 cut(s) 478, 949, 2080
BpiI GAAGAC 3 cut(s) 874, 901, 1753
BpmI CTGGAG 1 cut(s) 2199
BpuMI CCSGG 4 cut(s) 351, 873, 1452, 1832
BsaAI YACGTR 1 cut(s) 162
BsaBI GATNNNNATC 1 cut(s) 386
BsaHI GRCGYC 1 cut(s) 63
BsaI GGTCTC 2 cut(s) 598, 622
BsaJI CCNNGG 7 cut(s) 349, 802, 1171, 1364, 1451, 1496, 1736
BsaXI ACNNNNNCTCC 2 cut(s) 2211, 2241
Bsc4I CCNNNNNNNGG 5 cut(s) 325, 638, 725, 1033, 1370
Bse118I RCCGGY 1 cut(s) 2093
Bse1I ACTGG 5 cut(s) 208, 1009, 1647, 1877, 2240
Bse3DI GCAATG 1 cut(s) 1392
Bse8I GATNNNNATC 1 cut(s) 386
BseBI CCWGG 4 cut(s) 45, 1497, 1675, 2217
BseDI CCNNGG 7 cut(s) 349, 802, 1171, 1364, 1451, 1496, 1736
BseGI GGATG 5 cut(s) 335, 469, 1236, 1670, 2095
BseJI GATNNNNATC 1 cut(s) 386
BseLI CCNNNNNNNGG 5 cut(s) 325, 638, 725, 1033, 1370
BseMI GCAATG 1 cut(s) 1392
BseMII CTCAG 2 cut(s) 267, 1816
BseNI ACTGG 5 cut(s) 208, 1009, 1647, 1877, 2240
BsePI GCGCGC 1 cut(s) 1892
BseSI GKGCMC 1 cut(s) 2207
BseXI GCAGC 6 cut(s) 173, 491, 639, 693, 1226, 2068
BseYI CCCAGC 1 cut(s) 527
BsgI GTGCAG 1 cut(s) 172
Bsh1236I CGCG 1 cut(s) 1894
BshFI GGCC 9 cut(s) 174, 574, 642, 792, 801, 822, 1317, 1797, 2102
BsiHKCI CYCGRG 3 cut(s) 30, 1026, 1111
BsiSI CCGG 6 cut(s) 351, 789, 873, 1451, 1832, 2094
BsiWI CGTACG 1 cut(s) 158
BslFI GGGAC 3 cut(s) 64, 1247, 1259
BslI CCNNNNNNNGG 5 cut(s) 325, 638, 725, 1033, 1370
BsmAI GTCTC 4 cut(s) 13, 256, 598, 622
BsmFI GGGAC 3 cut(s) 64, 1247, 1259
BsnI GGCC 9 cut(s) 174, 574, 642, 792, 801, 822, 1317, 1797, 2102
Bso31I GGTCTC 2 cut(s) 598, 622
BsoBI CYCGRG 3 cut(s) 30, 1026, 1111
Bsp1286I GDGCHC 3 cut(s) 860, 1458, 2207
Bsp143I GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
Bsp19I CCATGG 3 cut(s) 1171, 1364, 1736
BspACI CCGC 5 cut(s) 144, 223, 457, 771, 1212
BspANI GGCC 9 cut(s) 174, 574, 642, 792, 801, 822, 1317, 1797, 2102
BspCNI CTCAG 2 cut(s) 266, 1815
BspFNI CGCG 1 cut(s) 1894
BspHI TCATGA 2 cut(s) 613, 885
BspLI GGNNCC 3 cut(s) 787, 1886, 1951
BspMAI CTGCAG 1 cut(s) 657
BspPI GGATC 4 cut(s) 65, 412, 1594, 1703
BspQI GCTCTTC 1 cut(s) 848
BspTNI GGTCTC 2 cut(s) 598, 622
BsrDI GCAATG 1 cut(s) 1392
BsrFI RCCGGY 1 cut(s) 2093
BsrI ACTGG 5 cut(s) 208, 1009, 1647, 1877, 2240
BssAI RCCGGY 1 cut(s) 2093
BssECI CCNNGG 7 cut(s) 349, 802, 1171, 1364, 1451, 1496, 1736
BssHII GCGCGC 1 cut(s) 1892
BssMI GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 4 cut(s) 802, 1171, 1364, 1736
Bst2UI CCWGG 4 cut(s) 45, 1497, 1675, 2217
Bst4CI ACNGT 9 cut(s) 7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
Bst6I CTCTTC 2 cut(s) 848, 1172
BstACI GRCGYC 1 cut(s) 63
BstBAI YACGTR 1 cut(s) 162
BstC8I GCNNGC 3 cut(s) 467, 844, 1894
BstDEI CTNAG 4 cut(s) 253, 667, 1802, 1815
BstDSI CCRYGG 3 cut(s) 1171, 1364, 1736
BstEII GGTNACC 1 cut(s) 218
BstF5I GGATG 5 cut(s) 335, 469, 1236, 1670, 2095
BstFNI CGCG 1 cut(s) 1894
BstH2I RGCGCY 2 cut(s) 611, 732
BstHHI GCGC 5 cut(s) 610, 731, 1627, 1894, 1896
BstKTI GATC 9 cut(s) 60, 123, 384, 407, 1225, 1467, 1602, 1711, 2185
BstMAI GTCTC 4 cut(s) 13, 256, 598, 622
BstMBI GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
BstNI CCWGG 4 cut(s) 45, 1497, 1675, 2217
BstNSI RCATGY 8 cut(s) 377, 469, 895, 1160, 1447, 1549, 1746, 1936
BstPI GGTNACC 1 cut(s) 218
BstSCI CCNGG 8 cut(s) 43, 349, 871, 1450, 1495, 1673, 1830, 2215
BstSFI CTRYAG 1 cut(s) 653
BstSLI GKGCMC 1 cut(s) 2207
BstUI CGCG 1 cut(s) 1894
BstV1I GCAGC 6 cut(s) 173, 491, 639, 693, 1226, 2068
BstV2I GAAGAC 3 cut(s) 874, 901, 1753
BstX2I RGATCY 1 cut(s) 1599
BstXI CCANNNNNNTGG 5 cut(s) 215, 567, 782, 1284, 2163
BstYI RGATCY 1 cut(s) 1599
BsuRI GGCC 9 cut(s) 174, 574, 642, 792, 801, 822, 1317, 1797, 2102
BtgI CCRYGG 3 cut(s) 1171, 1364, 1736
BtsCI GGATG 5 cut(s) 335, 469, 1236, 1670, 2095
BtsIMutI CAGTG 3 cut(s) 1002, 1640, 1689
Cac8I GCNNGC 3 cut(s) 467, 844, 1894
CaiI CAGNNNCTG 1 cut(s) 11
CciI TCATGA 2 cut(s) 613, 885
CfoI GCGC 5 cut(s) 610, 731, 1627, 1894, 1896
Cfr10I RCCGGY 1 cut(s) 2093
Cfr13I GGNCC 6 cut(s) 20, 353, 945, 1036, 1796, 2153
Csp6I GTAC 7 cut(s) 159, 544, 645, 658, 1102, 1656, 2178
CviQI GTAC 7 cut(s) 159, 544, 645, 658, 1102, 1656, 2178
DdeI CTNAG 4 cut(s) 253, 667, 1802, 1815
DpnI GATC 9 cut(s) 59, 122, 383, 406, 1224, 1466, 1601, 1710, 2184
DpnII GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
Eam1104I CTCTTC 2 cut(s) 848, 1172
EarI CTCTTC 2 cut(s) 848, 1172
Eco130I CCWWGG 4 cut(s) 802, 1171, 1364, 1736
Eco147I AGGCCT 1 cut(s) 174
Eco24I GRGCYC 2 cut(s) 860, 1458
Eco31I GGTCTC 2 cut(s) 598, 622
Eco47I GGWCC 5 cut(s) 20, 353, 945, 1036, 2153
Eco57I CTGAAG 4 cut(s) 120, 231, 646, 2117
Eco88I CYCGRG 3 cut(s) 30, 1026, 1111
Eco91I GGTNACC 1 cut(s) 218
EcoO109I RGGNCCY 1 cut(s) 1796
EcoO65I GGTNACC 1 cut(s) 218
EcoRI GAATTC 1 cut(s) 397
EcoRII CCWGG 4 cut(s) 43, 1495, 1673, 2215
EcoT14I CCWWGG 4 cut(s) 802, 1171, 1364, 1736
EcoT22I ATGCAT 1 cut(s) 471
EcoT38I GRGCYC 2 cut(s) 860, 1458
ErhI CCWWGG 4 cut(s) 802, 1171, 1364, 1736
FalI AAGNNNNNCTT 4 cut(s) 959, 991, 1212, 1244
FaqI GGGAC 3 cut(s) 64, 1247, 1259
FauI CCCGC 1 cut(s) 151
FauNDI CATATG 1 cut(s) 1531
FbaI TGATCA 3 cut(s) 381, 1464, 2182
Fnu4HI GCNGC 6 cut(s) 187, 480, 653, 682, 1215, 2082
FokI GGATG 5 cut(s) 342, 456, 1223, 1657, 2102
FriOI GRGCYC 2 cut(s) 860, 1458
Fsp4HI GCNGC 6 cut(s) 187, 480, 653, 682, 1215, 2082
FspBI CTAG 8 cut(s) 170, 648, 1382, 1653, 1749, 1889, 1910, 2058
FspI TGCGCA 1 cut(s) 1626
GlaI GCGC 5 cut(s) 609, 730, 1626, 1893, 1895
GluI GCNGC 6 cut(s) 187, 480, 653, 682, 1215, 2082
GsaI CCCAGC 1 cut(s) 531
GsuI CTGGAG 1 cut(s) 2199
HaeII RGCGCY 2 cut(s) 611, 732
HaeIII GGCC 9 cut(s) 174, 574, 642, 792, 801, 822, 1317, 1797, 2102
HapII CCGG 6 cut(s) 351, 789, 873, 1451, 1832, 2094
HhaI GCGC 5 cut(s) 610, 731, 1627, 1894, 1896
Hin1I GRCGYC 1 cut(s) 63
Hin6I GCGC 5 cut(s) 608, 729, 1625, 1892, 1894
HinP1I GCGC 5 cut(s) 608, 729, 1625, 1892, 1894
HincII GTYRAC 1 cut(s) 834
HindII GTYRAC 1 cut(s) 834
HinfI GANTC 5 cut(s) 26, 554, 761, 998, 1374
HpaII CCGG 6 cut(s) 351, 789, 873, 1451, 1832, 2094
HphI GGTGA 6 cut(s) 115, 376, 760, 1399, 1583, 2119
Hpy166II GTNNAC 6 cut(s) 834, 1085, 1812, 1862, 1984, 2001
Hpy188I TCNGA 7 cut(s) 120, 281, 320, 539, 1140, 1805, 2136
Hpy188III TCNNGA 9 cut(s) 23, 30, 402, 614, 850, 886, 1026, 1034, 2171
Hpy8I GTNNAC 6 cut(s) 834, 1085, 1812, 1862, 1984, 2001
Hpy99I CGWCG 2 cut(s) 65, 131
HpyAV CCTTC 9 cut(s) 11, 144, 439, 493, 751, 985, 1331, 2113, 2141
HpyCH4III ACNGT 9 cut(s) 7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
HpyCH4IV ACGT 2 cut(s) 63, 161
HpyCH4V TGCA 9 cut(s) 189, 422, 469, 655, 681, 1163, 1397, 1447, 1868
HpyF3I CTNAG 4 cut(s) 253, 667, 1802, 1815
HpySE526I ACGT 2 cut(s) 63, 161
Hsp92I GRCGYC 1 cut(s) 63
HspAI GCGC 5 cut(s) 608, 729, 1625, 1892, 1894
Ksp22I TGATCA 3 cut(s) 381, 1464, 2182
Kzo9I GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
LguI GCTCTTC 1 cut(s) 848
LmnI GCTCC 5 cut(s) 462, 1125, 1359, 1890, 2218
Lsp1109I GCAGC 6 cut(s) 173, 491, 639, 693, 1226, 2068
LweI GCATC 3 cut(s) 478, 949, 2080
MaeI CTAG 8 cut(s) 170, 648, 1382, 1653, 1749, 1889, 1910, 2058
MaeII ACGT 2 cut(s) 63, 161
MaeIII GTNAC 7 cut(s) 218, 766, 1076, 1516, 1548, 1571, 1586
MalI GATC 9 cut(s) 59, 122, 383, 406, 1224, 1466, 1601, 1710, 2184
MboI GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
MfeI CAATTG 2 cut(s) 93, 506
MflI RGATCY 1 cut(s) 1599
MhlI GDGCHC 3 cut(s) 860, 1458, 2207
MluCI AATT 9 cut(s) 93, 314, 397, 506, 1057, 1580, 1840, 1898, 2010
MlyI GAGTC 4 cut(s) 20, 755, 992, 1383
MmeI TCCRAC 3 cut(s) 728, 1381, 1987
Mph1103I ATGCAT 1 cut(s) 471
MroXI GAANNNNTTC 4 cut(s) 209, 449, 1046, 1844
MseI TTAA 5 cut(s) 149, 1056, 1307, 1920, 2148
MslI CAYNNNNRTG 7 cut(s) 440, 565, 890, 1282, 1675, 1741, 1931
MspA1I CMGCKG 1 cut(s) 2081
MspI CCGG 6 cut(s) 351, 789, 873, 1451, 1832, 2094
MspR9I CCNGG 8 cut(s) 45, 351, 873, 1452, 1497, 1675, 1832, 2217
MunI CAATTG 2 cut(s) 93, 506
MvaI CCWGG 4 cut(s) 45, 1497, 1675, 2217
MvnI CGCG 1 cut(s) 1894
NciI CCSGG 4 cut(s) 351, 873, 1452, 1832
NcoI CCATGG 3 cut(s) 1171, 1364, 1736
NdeI CATATG 1 cut(s) 1531
NdeII GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
NlaIV GGNNCC 3 cut(s) 787, 1886, 1951
NmuCI GTSAC 5 cut(s) 766, 1516, 1548, 1571, 1586
NsbI TGCGCA 1 cut(s) 1626
NsiI ATGCAT 1 cut(s) 471
NspI RCATGY 8 cut(s) 377, 469, 895, 1160, 1447, 1549, 1746, 1936
OliI CACNNNNGTG 2 cut(s) 440, 1282
PaeI GCATGC 1 cut(s) 469
PaeR7I CTCGAG 2 cut(s) 30, 1111
PagI TCATGA 2 cut(s) 613, 885
PauI GCGCGC 1 cut(s) 1892
PceI AGGCCT 1 cut(s) 174
PciI ACATGT 3 cut(s) 891, 1156, 1742
PciSI GCTCTTC 1 cut(s) 848
PdmI GAANNNNTTC 4 cut(s) 209, 449, 1046, 1844
PfeI GAWTC 1 cut(s) 554
Pfl23II CGTACG 1 cut(s) 158
PflFI GACNNNGTC 1 cut(s) 764
PfoI TCCNGGA 1 cut(s) 2215
PkrI GCNGC 6 cut(s) 188, 481, 654, 683, 1216, 2083
PleI GAGTC 4 cut(s) 20, 755, 992, 1382
PpsI GAGTC 4 cut(s) 20, 755, 992, 1382
Ppu21I YACGTR 1 cut(s) 162
PscI ACATGT 3 cut(s) 891, 1156, 1742
PshBI ATTAAT 2 cut(s) 1056, 2148
Psp6I CCWGG 4 cut(s) 43, 1495, 1673, 2215
PspEI GGTNACC 1 cut(s) 218
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 4 cut(s) 43, 1495, 1673, 2215
PspLI CGTACG 1 cut(s) 158
PspN4I GGNNCC 3 cut(s) 787, 1886, 1951
PspPI GGNCC 6 cut(s) 20, 353, 945, 1036, 1796, 2153
PspXI VCTCGAGB 1 cut(s) 1111
PstI CTGCAG 1 cut(s) 657
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 1 cut(s) 1599
PsyI GACNNNGTC 1 cut(s) 764
PteI GCGCGC 1 cut(s) 1892
PvuII CAGCTG 1 cut(s) 2081
RsaI GTAC 7 cut(s) 160, 545, 646, 659, 1103, 1657, 2179
RsaNI GTAC 7 cut(s) 159, 544, 645, 658, 1102, 1656, 2178
RseI CAYNNNNRTG 7 cut(s) 440, 565, 890, 1282, 1675, 1741, 1931
SapI GCTCTTC 1 cut(s) 848
SaqAI TTAA 5 cut(s) 149, 1056, 1307, 1920, 2148
SatI GCNGC 6 cut(s) 187, 480, 653, 682, 1215, 2082
Sau3AI GATC 9 cut(s) 57, 120, 381, 404, 1222, 1464, 1599, 1708, 2182
Sau96I GGNCC 6 cut(s) 20, 353, 945, 1036, 1796, 2153
ScaI AGTACT 2 cut(s) 659, 2179
SchI GAGTC 4 cut(s) 20, 755, 992, 1383
ScrFI CCNGG 8 cut(s) 45, 351, 873, 1452, 1497, 1675, 1832, 2217
SduI GDGCHC 3 cut(s) 860, 1458, 2207
SfaNI GCATC 3 cut(s) 478, 949, 2080
SfcI CTRYAG 1 cut(s) 653
SfiI GGCCNNNNNGGCC 1 cut(s) 798
Sfr274I CTCGAG 2 cut(s) 30, 1111
SinI GGWCC 5 cut(s) 20, 353, 945, 1036, 2153
SlaI CTCGAG 2 cut(s) 30, 1111
SmiMI CAYNNNNRTG 7 cut(s) 440, 565, 890, 1282, 1675, 1741, 1931
SmlI CTYRAG 2 cut(s) 30, 1111
SmoI CTYRAG 2 cut(s) 30, 1111
SphI GCATGC 1 cut(s) 469
Sse9I AATT 9 cut(s) 93, 314, 397, 506, 1057, 1580, 1840, 1898, 2010
SseBI AGGCCT 1 cut(s) 174
SsiI CCGC 5 cut(s) 144, 223, 457, 771, 1212
SspMI CTAG 8 cut(s) 170, 648, 1382, 1653, 1749, 1889, 1910, 2058
StuI AGGCCT 1 cut(s) 174
StyD4I CCNGG 8 cut(s) 43, 349, 871, 1450, 1495, 1673, 1830, 2215
StyI CCWWGG 4 cut(s) 802, 1171, 1364, 1736
TaaI ACNGT 9 cut(s) 7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
TaiI ACGT 2 cut(s) 66, 164
TaqI TCGA 7 cut(s) 15, 31, 60, 996, 1050, 1112, 2035
TasI AATT 9 cut(s) 93, 314, 397, 506, 1057, 1580, 1840, 1898, 2010
TatI WGTACW 3 cut(s) 657, 1101, 2177
TfiI GAWTC 1 cut(s) 554
Tru1I TTAA 5 cut(s) 149, 1056, 1307, 1920, 2148
Tru9I TTAA 5 cut(s) 149, 1056, 1307, 1920, 2148
TscAI CASTG 3 cut(s) 1009, 1647, 1696
TseFI GTSAC 5 cut(s) 766, 1516, 1548, 1571, 1586
TseI GCWGC 6 cut(s) 186, 479, 652, 681, 1214, 2081
Tsp45I GTSAC 5 cut(s) 766, 1516, 1548, 1571, 1586
TspDTI ATGAA 8 cut(s) 602, 630, 874, 901, 902, 1268, 1610, 1853
TspGWI ACGGA 2 cut(s) 754, 2181
TspRI CASTG 3 cut(s) 1009, 1647, 1696
Tth111I GACNNNGTC 1 cut(s) 764
VpaK11BI GGWCC 5 cut(s) 20, 353, 945, 1036, 2153
VspI ATTAAT 2 cut(s) 1056, 2148
XapI RAATTY 3 cut(s) 397, 1898, 2010
XceI RCATGY 8 cut(s) 377, 469, 895, 1160, 1447, 1549, 1746, 1936
XcmI CCANNNNNNNNNTGG 1 cut(s) 567
XhoI CTCGAG 2 cut(s) 30, 1111
XmnI GAANNNNTTC 4 cut(s) 209, 449, 1046, 1844
XspI CTAG 8 cut(s) 170, 648, 1382, 1653, 1749, 1889, 1910, 2058
ZraI GACGTC 1 cut(s) 64
ZrmI AGTACT 2 cut(s) 659, 2179
Zsp2I ATGCAT 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.