Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G43770 AT1G43770 AT1G43770 |
| fragaria_vesca | FvH4_2g14350 FvH4_3g26810 FvH4_3g26810 FvH4_3g26810 FvH4_3g26810 FvH4_6g03141 |
| malus_domestica | MD05G1018500.v1.1 MD10G1018200.v1.1 |
| prunus_persica | Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 Prupe.8G022600_v2.0.a1 |
| pyrus_communis | pycom05g01100 pycom10g01220 |
| rosa_chinensis | RchiOBHm_Chr3g0451401 RchiOBHm_Chr6g0276691 |
| rosa_laevigata | RLG00000013378 RLG00000025662 |
| rosa_multiflora | Rmu_sc0000441.1_g000026 Rmu_sc0002575.1_g000003 Rmu_sc0021369.1_g000002 |
| rosa_roxburghii | Rroxscaffold_164G00436520 Rroxscaffold_6G00428820 Rroxscaffold_7G00192110 |
| rosa_rugosa | Rorug02G0633600 Rorug06G0103000 |
| rosa_samantha | Rh3AG036600 Rh3BG037200 Rh3CG035800 Rh3DG036700 Rh6AG213200 Rh6BG218200 Rh6CG220700 Rh6DG210800 |
| rosa_wichuraiana | Rw3G002700 Rw6G018650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 263 |
| AccI | GTMKAC | 1 cut(s) | 6 |
| AclWI | GGATC | 3 cut(s) | 57, 165, 206 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AcuI | CTGAAG | 3 cut(s) | 168, 236, 324 |
| AfaI | GTAC | 1 cut(s) | 179 |
| AgsI | TTSAA | 2 cut(s) | 115, 238 |
| AjiI | CACGTC | 1 cut(s) | 209 |
| AluBI | AGCT | 1 cut(s) | 87 |
| AluI | AGCT | 1 cut(s) | 87 |
| AlwI | GGATC | 3 cut(s) | 57, 165, 206 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| AspS9I | GGNCC | 1 cut(s) | 41 |
| AvaII | GGWCC | 1 cut(s) | 41 |
| Bme18I | GGWCC | 1 cut(s) | 41 |
| BmgBI | CACGTC | 1 cut(s) | 209 |
| BmgT120I | GGNCC | 1 cut(s) | 41 |
| BmsI | GCATC | 2 cut(s) | 229, 256 |
| BsaJI | CCNNGG | 2 cut(s) | 10, 37 |
| Bse3DI | GCAATG | 1 cut(s) | 52 |
| BseDI | CCNNGG | 2 cut(s) | 10, 37 |
| BseMI | GCAATG | 1 cut(s) | 52 |
| Bsp143I | GATC | 3 cut(s) | 49, 170, 211 |
| BspPI | GGATC | 3 cut(s) | 57, 165, 206 |
| BsrDI | GCAATG | 1 cut(s) | 52 |
| BssECI | CCNNGG | 2 cut(s) | 10, 37 |
| BssMI | GATC | 3 cut(s) | 49, 170, 211 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| Bst4CI | ACNGT | 1 cut(s) | 165 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstKTI | GATC | 3 cut(s) | 52, 173, 214 |
| BstMBI | GATC | 3 cut(s) | 49, 170, 211 |
| BstX2I | RGATCY | 1 cut(s) | 170 |
| BstYI | RGATCY | 1 cut(s) | 170 |
| BtrI | CACGTC | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 1 cut(s) | 41 |
| Csp6I | GTAC | 1 cut(s) | 178 |
| CviJI | RGCY | 2 cut(s) | 87, 278 |
| CviKI_1 | RGCY | 2 cut(s) | 87, 278 |
| CviQI | GTAC | 1 cut(s) | 178 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 3 cut(s) | 51, 172, 213 |
| DpnII | GATC | 3 cut(s) | 49, 170, 211 |
| DraI | TTTAAA | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| Eco47I | GGWCC | 1 cut(s) | 41 |
| Eco57I | CTGAAG | 3 cut(s) | 168, 236, 324 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaiI | YATR | 4 cut(s) | 134, 263, 295, 314 |
| FblI | GTMKAC | 1 cut(s) | 6 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 3 cut(s) | 97, 170, 175 |
| Hpy188III | TCNNGA | 1 cut(s) | 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| HpyAV | CCTTC | 1 cut(s) | 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 165 |
| HpyCH4IV | ACGT | 1 cut(s) | 208 |
| HpyCH4V | TGCA | 2 cut(s) | 57, 322 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| HpySE526I | ACGT | 1 cut(s) | 208 |
| Kzo9I | GATC | 3 cut(s) | 49, 170, 211 |
| LmnI | GCTCC | 1 cut(s) | 244 |
| LpnPI | CCDG | 4 cut(s) | 209, 228, 239, 288 |
| LweI | GCATC | 2 cut(s) | 229, 256 |
| MaeII | ACGT | 1 cut(s) | 208 |
| MalI | GATC | 3 cut(s) | 51, 172, 213 |
| MboI | GATC | 3 cut(s) | 49, 170, 211 |
| MboII | GAAGA | 5 cut(s) | 136, 139, 148, 242, 317 |
| MflI | RGATCY | 1 cut(s) | 170 |
| MluCI | AATT | 3 cut(s) | 64, 198, 258 |
| MnlI | CCTC | 4 cut(s) | 47, 102, 114, 289 |
| MseI | TTAA | 2 cut(s) | 189, 338 |
| NdeII | GATC | 3 cut(s) | 49, 170, 211 |
| PsiI | TTATAA | 1 cut(s) | 263 |
| PspPI | GGNCC | 1 cut(s) | 41 |
| PsuI | RGATCY | 1 cut(s) | 170 |
| RsaI | GTAC | 1 cut(s) | 179 |
| RsaNI | GTAC | 1 cut(s) | 178 |
| SaqAI | TTAA | 2 cut(s) | 189, 338 |
| Sau3AI | GATC | 3 cut(s) | 49, 170, 211 |
| Sau96I | GGNCC | 1 cut(s) | 41 |
| SetI | ASST | 5 cut(s) | 39, 73, 89, 113, 211 |
| SfaNI | GCATC | 2 cut(s) | 229, 256 |
| SinI | GGWCC | 1 cut(s) | 41 |
| Sse9I | AATT | 3 cut(s) | 64, 198, 258 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TaaI | ACNGT | 1 cut(s) | 165 |
| TaiI | ACGT | 1 cut(s) | 211 |
| TaqII | GACCGA | 1 cut(s) | 29 |
| TasI | AATT | 3 cut(s) | 64, 198, 258 |
| Tru1I | TTAA | 2 cut(s) | 189, 338 |
| Tru9I | TTAA | 2 cut(s) | 189, 338 |
| TspDTI | ATGAA | 1 cut(s) | 149 |
| VpaK11BI | GGWCC | 1 cut(s) | 41 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XmiI | GTMKAC | 1 cut(s) | 6 |