Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002431

Physical Location & Seq

Genomic Coordinates Reverse (-)

25537063 .. 25545008

Gene Structure 7946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0172900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGACTCAGCGGTTCGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGATTGAGTCCGCCAAATCGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCCCTATTACCAAGTACACGTTTCTCCAATGCTTTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGAATAAGCAAGTACATAAAATTCCAGATGATGAGGATGGGCTTCACATGTGCTCTTCGACAACCTTGATATCCAGTCCTTCAAAGAATGAAGCTACGTTAGAAGAACAAGCATCAGAGCCAGGTTCTTGCGGATATGACAATGTTGAAACTGCTTTAAGTAATCTTCGTCTTGAATCAAAGAATTCTAGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGCAGTTTATGACCCTCATTGGTCCAAAAGACAGGAAGAAAATAAATCATTAGATAGCAGATACGGTGATACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATAATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAGGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGTTCCTGTGAACGCAAGGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGAAGTGGCTAATTGTGAAGACGAGAGAATTGAAAACTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGACCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCATGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAACTTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTCCCTCCTGCTGAGGCTTCTCTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATCCTCGATCAATCTCGGGAAGCTGTTATAGCCGATTGTATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATCCAGACAATGAAGAACCTGGCATAAAGCATTTTTACGAAATGTCCAATTCAACACAAAAAATTCATGGGAATTGTTATAGTTCTGATGCACATGGGATCAGAATTACATCGCCAGGAGCTTATTCTTCTCCTAGTCATGTATGCTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATATGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATACTGAGGAAATGACTGATTCGCCGGTCGACATTGAAGCTTGTCCGAAAGACACTGCATTACCTTCTGATATACTACCCAGGGATACATCTCAGAACCATGGGTTCTCAAAGAACATTGGAGATAATGCTGATGTGAACTCAATTTCTGATACATCTAGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTGTGGAAGCTGAGGCGTTTAACTGTCCAAGGAAAACAGAGAAATCTGAATCGTCTTCAAGTGGGGATCTCACTGCTTGTGTTGTACAGGATTCTGAAGAGGAAAGTGACATGCATGGCACTGAGGTTAAATGTATCTCATCCTCTCCAGCAAACCAACAATTCTTCCATCAACAAGCTGACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGCATCCGAATCAGATGAGCGGCAGACTCCAAAAAGACCAAGGCTCACATATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGAGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1644

Protein Analysis

735

Amino Acids

83.9

Weight (kDa)

6.02

Isoelectric Point (pI)

56.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	126 - 187	1.5e-14	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	224 - 422	2.3e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24740 AT3G24740 AT3G24740 AT3G24740 AT3G24740 AT3G24740
fragaria_vesca	FvH4_2g19370 FvH4_2g19370 FvH4_2g19370 FvH4_2g19370 FvH4_2g19370 FvH4_2g19370 FvH4_2g19370 FvH4_2g19370
malus_domestica	MD05G1178600.v1.1 MD10G1166800.v1.1
prunus_persica	Prupe.8G205000_v2.0.a1 Prupe.8G205000_v2.0.a1 Prupe.8G205000_v2.0.a1 Prupe.8G205000_v2.0.a1
pyrus_communis	pycom10g14380
rosa_chinensis	RchiOBHm_Chr6g0285161
rosa_laevigata	RLG00000012667
rosa_multiflora	Rmu_sc0006801.1_g000001 Rmu_sc0022341.1_g000001
rosa_roxburghii	Rroxscaffold_7G00183590 Rroxscaffold_7G00183980
rosa_rugosa	Rorug06G0172400 Rorug06G0172500 Rorug06G0172500 Rorug06G0172600 Rorug06G0172700 Rorug06G0172800 Rorug06G0172900 Rorug06G0172900
rosa_samantha	Rh6AG282800 Rh6BG283600 Rh6CG285500 Rh6DG278600
rosa_wichuraiana	Rw6G024320 Rw6G024380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	988
AccBSI	CCGCTC	1 cut(s)	2122
AccI	GTMKAC	1 cut(s)	1683
AciI	CCGC	5 cut(s)	10, 31, 81, 375, 2122
AclWI	GGATC	6 cut(s)	608, 621, 1517, 1828, 1938, 2106
AcsI	RAATTY	5 cut(s)	98, 264, 427, 1162, 1473
AcuI	CTGAAG	1 cut(s)	1980
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	4 cut(s)	176, 258, 1404, 1950
AflIII	ACRYGT	3 cut(s)	177, 291, 1576
AjiI	CACGTC	1 cut(s)	1577
AjnI	CCWGG	6 cut(s)	110, 364, 983, 1429, 1525, 1733
Alw21I	GWGCWC	2 cut(s)	299, 1257
Alw26I	GTCTC	3 cut(s)	24, 659, 1026
AlwI	GGATC	6 cut(s)	608, 621, 1517, 1828, 1938, 2106
Ama87I	CYCGRG	1 cut(s)	1353
ApeKI	GCWGC	2 cut(s)	824, 1557
ApoI	RAATTY	5 cut(s)	98, 264, 427, 1162, 1473
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	675, 1380, 2076
AspS9I	GGNCC	1 cut(s)	504
AsuC2I	CCSGG	1 cut(s)	939
AsuHPI	GGTGA	5 cut(s)	560, 953, 1100, 1115, 1626
AsuII	TTCGAA	1 cut(s)	103
AvaI	CYCGRG	1 cut(s)	1353
AvaII	GGWCC	1 cut(s)	504
AxyI	CCTNAGG	1 cut(s)	729
BaeI	ACNNNNGTAYC	2 cut(s)	1048, 1081
BamHI	GGATCC	1 cut(s)	613
BanI	GGYRCC	1 cut(s)	988
BanII	GRGCYC	2 cut(s)	164, 1257
BarI	GAAGNNNNNNTAC	4 cut(s)	1316, 1348, 2158, 2190
BbsI	GAAGAC	3 cut(s)	63, 966, 1911
Bbv12I	GWGCWC	2 cut(s)	299, 1257
BbvCI	CCTCAGC	2 cut(s)	1293, 1875
BbvI	GCAGC	2 cut(s)	836, 1544
BccI	CCATC	4 cut(s)	275, 808, 1320, 2040
BceAI	ACGGC	1 cut(s)	1585
BciT130I	CCWGG	6 cut(s)	112, 366, 985, 1431, 1527, 1735
BciVI	GTATCC	1 cut(s)	1732
BcnI	CCSGG	1 cut(s)	939
BcoDI	GTCTC	3 cut(s)	24, 659, 1026
BfaI	CTAG	5 cut(s)	432, 852, 1545, 1563, 1812
BfmI	CTRYAG	1 cut(s)	2157
BfuI	GTATCC	1 cut(s)	1732
BglII	AGATCT	1 cut(s)	643
BisI	GCNGC	3 cut(s)	825, 1558, 2123
BlsI	GCNGC	3 cut(s)	826, 1559, 2124
BmcAI	AGTACT	1 cut(s)	1404
Bme1390I	CCNGG	7 cut(s)	112, 366, 939, 985, 1431, 1527, 1735
Bme18I	GGWCC	1 cut(s)	504
BmeT110I	CYCGRG	1 cut(s)	1353
BmgBI	CACGTC	1 cut(s)	1577
BmgT120I	GGNCC	1 cut(s)	504
BmiI	GGNNCC	4 cut(s)	615, 908, 990, 1283
BmrFI	CCNGG	7 cut(s)	112, 366, 939, 985, 1431, 1527, 1735
BmsI	GCATC	5 cut(s)	365, 610, 1005, 1489, 2114
BpiI	GAAGAC	3 cut(s)	63, 966, 1911
BpmI	CTGGAG	4 cut(s)	809, 934, 1163, 1995
Bpu10I	CCTNAGC	2 cut(s)	1293, 1875
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	203, 677, 1383
BpuMI	CCSGG	1 cut(s)	939
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	1026
BsaJI	CCNNGG	9 cut(s)	110, 111, 983, 984, 1733, 1734, 1753, 1892, 2141
Bse118I	RCCGGY	1 cut(s)	1678
Bse1I	ACTGG	4 cut(s)	318, 917, 1146, 2056
Bse21I	CCTNAGG	1 cut(s)	729
Bse3DI	GCAATG	1 cut(s)	238
BseBI	CCWGG	6 cut(s)	112, 366, 985, 1431, 1527, 1735
BseDI	CCNNGG	9 cut(s)	110, 111, 983, 984, 1733, 1734, 1753, 1892, 2141
BseGI	GGATG	4 cut(s)	286, 934, 2003, 2105
BseMI	GCAATG	1 cut(s)	238
BseMII	CTCAG	7 cut(s)	20, 720, 1284, 1650, 1760, 1866, 1977
BseNI	ACTGG	4 cut(s)	318, 917, 1146, 2056
BseXI	GCAGC	2 cut(s)	836, 1544
BsgI	GTGCAG	1 cut(s)	504
Bsh1285I	CGRYCG	1 cut(s)	1683
BshNI	GGYRCC	1 cut(s)	988
BsiEI	CGRYCG	1 cut(s)	1683
BsiHKAI	GWGCWC	2 cut(s)	299, 1257
BsiHKCI	CYCGRG	1 cut(s)	1353
BsiSI	CCGG	2 cut(s)	939, 1679
BslFI	GGGAC	1 cut(s)	1587
BsmAI	GTCTC	3 cut(s)	24, 659, 1026
BsmFI	GGGAC	1 cut(s)	1587
BsmI	GAATGC	1 cut(s)	97
Bso31I	GGTCTC	1 cut(s)	1026
BsoBI	CYCGRG	1 cut(s)	1353
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	3 cut(s)	164, 299, 1257
Bsp1407I	TGTACA	1 cut(s)	1948
Bsp143I	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
Bsp19I	CCATGG	1 cut(s)	1753
BspACI	CCGC	5 cut(s)	10, 31, 81, 375, 2122
BspCNI	CTCAG	7 cut(s)	19, 721, 1285, 1651, 1759, 1867, 1978
BspHI	TCATGA	1 cut(s)	2187
BspLI	GGNNCC	4 cut(s)	615, 908, 990, 1283
BspPI	GGATC	6 cut(s)	608, 621, 1517, 1828, 1938, 2106
BspQI	GCTCTTC	3 cut(s)	152, 304, 430
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	988
BspTNI	GGTCTC	1 cut(s)	1026
BsrBI	CCGCTC	1 cut(s)	2122
BsrDI	GCAATG	1 cut(s)	238
BsrFI	RCCGGY	1 cut(s)	1678
BsrGI	TGTACA	1 cut(s)	1948
BsrI	ACTGG	4 cut(s)	318, 917, 1146, 2056
BssAI	RCCGGY	1 cut(s)	1678
BssECI	CCNNGG	9 cut(s)	110, 111, 983, 984, 1733, 1734, 1753, 1892, 2141
BssMI	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	3 cut(s)	1753, 1892, 2141
Bst2UI	CCWGG	6 cut(s)	112, 366, 985, 1431, 1527, 1735
Bst4CI	ACNGT	3 cut(s)	474, 548, 1889
Bst6I	CTCTTC	5 cut(s)	152, 304, 430, 1062, 1956
BstACI	GRCGYC	1 cut(s)	63
BstAUI	TGTACA	1 cut(s)	1948
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	7 cut(s)	6, 729, 1293, 1659, 1746, 1875, 1986
BstDSI	CCRYGG	1 cut(s)	1753
BstF5I	GGATG	4 cut(s)	286, 934, 2003, 2105
BstKTI	GATC	9 cut(s)	616, 646, 787, 1248, 1348, 1512, 1823, 1933, 2101
BstMAI	GTCTC	3 cut(s)	24, 659, 1026
BstMBI	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
BstMCI	CGRYCG	1 cut(s)	1683
BstMWI	GCNNNNNNNGC	2 cut(s)	1153, 1367
BstNI	CCWGG	6 cut(s)	112, 366, 985, 1431, 1527, 1735
BstNSI	RCATGY	2 cut(s)	295, 1978
BstSCI	CCNGG	7 cut(s)	110, 364, 937, 983, 1429, 1525, 1733
BstSFI	CTRYAG	1 cut(s)	2157
BstV1I	GCAGC	2 cut(s)	836, 1544
BstV2I	GAAGAC	3 cut(s)	63, 966, 1911
BstX2I	RGATCY	3 cut(s)	613, 643, 1930
BstYI	RGATCY	3 cut(s)	613, 643, 1930
Bsu36I	CCTNAGG	1 cut(s)	729
BsuI	GTATCC	1 cut(s)	1732
BtgI	CCRYGG	1 cut(s)	1753
BtgZI	GCGATG	1 cut(s)	1506
BtrI	CACGTC	1 cut(s)	1577
BtsCI	GGATG	4 cut(s)	286, 934, 2003, 2105
BtsI	GCAGTG	2 cut(s)	1707, 1935
BtsIMutI	CAGTG	5 cut(s)	910, 1707, 1842, 1935, 1983
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2187
Cfr10I	RCCGGY	1 cut(s)	1678
Cfr13I	GGNCC	1 cut(s)	504
Csp6I	GTAC	4 cut(s)	175, 257, 1403, 1949
CviQI	GTAC	4 cut(s)	175, 257, 1403, 1949
DdeI	CTNAG	7 cut(s)	6, 729, 1293, 1659, 1746, 1875, 1986
DpnI	GATC	9 cut(s)	615, 645, 786, 1247, 1347, 1511, 1822, 1932, 2100
DpnII	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	5 cut(s)	152, 304, 430, 1062, 1956
EarI	CTCTTC	5 cut(s)	152, 304, 430, 1062, 1956
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1255
Eco130I	CCWWGG	3 cut(s)	1753, 1892, 2141
Eco24I	GRGCYC	2 cut(s)	164, 1257
Eco31I	GGTCTC	1 cut(s)	1026
Eco32I	GATATC	2 cut(s)	315, 1339
Eco47I	GGWCC	1 cut(s)	504
Eco53kI	GAGCTC	1 cut(s)	1255
Eco57I	CTGAAG	1 cut(s)	1980
Eco81I	CCTNAGG	1 cut(s)	729
Eco88I	CYCGRG	1 cut(s)	1353
EcoICRI	GAGCTC	1 cut(s)	1255
EcoRI	GAATTC	1 cut(s)	427
EcoRII	CCWGG	6 cut(s)	110, 364, 983, 1429, 1525, 1733
EcoRV	GATATC	2 cut(s)	315, 1339
EcoT14I	CCWWGG	3 cut(s)	1753, 1892, 2141
EcoT22I	ATGCAT	2 cut(s)	998, 1980
EcoT38I	GRGCYC	2 cut(s)	164, 1257
ErhI	CCWWGG	3 cut(s)	1753, 1892, 2141
FaqI	GGGAC	1 cut(s)	1587
FauNDI	CATATG	1 cut(s)	1005
FblI	GTMKAC	1 cut(s)	1683
Fnu4HI	GCNGC	3 cut(s)	825, 1558, 2123
FokI	GGATG	4 cut(s)	293, 921, 1990, 2092
FriOI	GRGCYC	2 cut(s)	164, 1257
Fsp4HI	GCNGC	3 cut(s)	825, 1558, 2123
FspBI	CTAG	5 cut(s)	432, 852, 1545, 1563, 1812
GluI	GCNGC	3 cut(s)	825, 1558, 2123
GsuI	CTGGAG	4 cut(s)	809, 934, 1163, 1995
HapII	CCGG	2 cut(s)	939, 1679
Hin1I	GRCGYC	1 cut(s)	63
HincII	GTYRAC	3 cut(s)	1228, 1605, 1684
HindII	GTYRAC	3 cut(s)	1228, 1605, 1684
HindIII	AAGCTT	1 cut(s)	1692
HpaI	GTTAAC	1 cut(s)	1228
HpaII	CCGG	2 cut(s)	939, 1679
HphI	GGTGA	5 cut(s)	560, 953, 1100, 1115, 1626
Hpy166II	GTNNAC	8 cut(s)	177, 815, 898, 1178, 1228, 1605, 1684, 1792
Hpy8I	GTNNAC	8 cut(s)	177, 815, 898, 1178, 1228, 1605, 1684, 1792
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	5 cut(s)	135, 333, 1094, 1728, 2163
HpyCH4III	ACNGT	3 cut(s)	474, 548, 1889
HpyCH4IV	ACGT	4 cut(s)	63, 179, 341, 1576
HpyCH4V	TGCA	8 cut(s)	485, 623, 996, 1003, 1502, 1712, 1978, 2200
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1153, 1367
HpyF3I	CTNAG	7 cut(s)	6, 729, 1293, 1659, 1746, 1875, 1986
HpySE526I	ACGT	4 cut(s)	63, 179, 341, 1576
Hsp92I	GRCGYC	1 cut(s)	63
KspAI	GTTAAC	1 cut(s)	1228
Kzo9I	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
LguI	GCTCTTC	3 cut(s)	152, 304, 430
LmnI	GCTCC	6 cut(s)	203, 912, 1144, 1201, 1225, 1529
Lsp1109I	GCAGC	2 cut(s)	836, 1544
LweI	GCATC	5 cut(s)	365, 610, 1005, 1489, 2114
MaeI	CTAG	5 cut(s)	432, 852, 1545, 1563, 1812
MaeII	ACGT	4 cut(s)	63, 179, 341, 1576
MaeIII	GTNAC	5 cut(s)	235, 625, 1088, 1632, 1970
MalI	GATC	9 cut(s)	615, 645, 786, 1247, 1347, 1511, 1822, 1932, 2100
MbiI	CCGCTC	1 cut(s)	2122
MboI	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
MfeI	CAATTG	1 cut(s)	1124
MflI	RGATCY	3 cut(s)	613, 643, 1930
MhlI	GDGCHC	3 cut(s)	164, 299, 1257
MlyI	GAGTC	7 cut(s)	26, 86, 205, 1173, 1853, 2039, 2122
MmeI	TCCRAC	2 cut(s)	1284, 1630
Mph1103I	ATGCAT	2 cut(s)	998, 1980
MslI	CAYNNNNRTG	1 cut(s)	939
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	2 cut(s)	939, 1679
MspR9I	CCNGG	7 cut(s)	112, 366, 939, 985, 1431, 1527, 1735
MunI	CAATTG	1 cut(s)	1124
Mva1269I	GAATGC	1 cut(s)	97
MvaI	CCWGG	6 cut(s)	112, 366, 985, 1431, 1527, 1735
MwoI	GCNNNNNNNGC	2 cut(s)	1153, 1367
NciI	CCSGG	1 cut(s)	939
NcoI	CCATGG	1 cut(s)	1753
NdeI	CATATG	1 cut(s)	1005
NdeII	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
NlaIV	GGNNCC	4 cut(s)	615, 908, 990, 1283
NmuCI	GTSAC	4 cut(s)	235, 1088, 1632, 1970
NsiI	ATGCAT	2 cut(s)	998, 1980
NspI	RCATGY	2 cut(s)	295, 1978
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2187
PasI	CCCWGGG	3 cut(s)	111, 984, 1734
PciI	ACATGT	1 cut(s)	291
PciSI	GCTCTTC	3 cut(s)	152, 304, 430
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1341
PctI	GAATGC	1 cut(s)	97
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	3 cut(s)	826, 1559, 2124
PleI	GAGTC	7 cut(s)	25, 85, 205, 1173, 1853, 2039, 2122
PpsI	GAGTC	7 cut(s)	25, 85, 205, 1173, 1853, 2039, 2122
PscI	ACATGT	1 cut(s)	291
PshBI	ATTAAT	3 cut(s)	675, 1380, 2076
Psp124BI	GAGCTC	1 cut(s)	1257
Psp6I	CCWGG	6 cut(s)	110, 364, 983, 1429, 1525, 1733
PspGI	CCWGG	6 cut(s)	110, 364, 983, 1429, 1525, 1733
PspN4I	GGNNCC	4 cut(s)	615, 908, 990, 1283
PspPI	GGNCC	1 cut(s)	504
PsrI	GAACNNNNNNTAC	2 cut(s)	1131, 1163
PsuI	RGATCY	3 cut(s)	613, 643, 1930
PsyI	GACNNNGTC	2 cut(s)	62, 65
RsaI	GTAC	4 cut(s)	176, 258, 1404, 1950
RsaNI	GTAC	4 cut(s)	175, 257, 1403, 1949
RseI	CAYNNNNRTG	1 cut(s)	939
SacI	GAGCTC	1 cut(s)	1257
SalI	GTCGAC	1 cut(s)	1682
SapI	GCTCTTC	3 cut(s)	152, 304, 430
SatI	GCNGC	3 cut(s)	825, 1558, 2123
Sau3AI	GATC	9 cut(s)	613, 643, 784, 1245, 1345, 1509, 1820, 1930, 2098
Sau96I	GGNCC	1 cut(s)	504
ScaI	AGTACT	1 cut(s)	1404
SchI	GAGTC	7 cut(s)	26, 86, 205, 1173, 1853, 2039, 2122
ScrFI	CCNGG	7 cut(s)	112, 366, 939, 985, 1431, 1527, 1735
SduI	GDGCHC	3 cut(s)	164, 299, 1257
SfaNI	GCATC	5 cut(s)	365, 610, 1005, 1489, 2114
SfcI	CTRYAG	1 cut(s)	2157
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	504
SmiMI	CAYNNNNRTG	1 cut(s)	939
SmlI	CTYRAG	3 cut(s)	218, 656, 1398
SmoI	CTYRAG	3 cut(s)	218, 656, 1398
SsiI	CCGC	5 cut(s)	10, 31, 81, 375, 2122
SspMI	CTAG	5 cut(s)	432, 852, 1545, 1563, 1812
SstI	GAGCTC	1 cut(s)	1257
StyD4I	CCNGG	7 cut(s)	110, 364, 937, 983, 1429, 1525, 1733
StyI	CCWWGG	3 cut(s)	1753, 1892, 2141
TaaI	ACNGT	3 cut(s)	474, 548, 1889
TaiI	ACGT	4 cut(s)	66, 182, 344, 1579
TatI	WGTACW	4 cut(s)	174, 256, 1402, 1948
TauI	GCSGC	1 cut(s)	2125
TscAI	CASTG	5 cut(s)	917, 1714, 1842, 1942, 1990
TseFI	GTSAC	4 cut(s)	235, 1088, 1632, 1970
TseI	GCWGC	2 cut(s)	824, 1557
Tsp45I	GTSAC	4 cut(s)	235, 1088, 1632, 1970
TspDTI	ATGAA	8 cut(s)	348, 661, 877, 1181, 1404, 1437, 1466, 1866
TspRI	CASTG	5 cut(s)	917, 1714, 1842, 1942, 1990
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	504
VspI	ATTAAT	3 cut(s)	675, 1380, 2076
XapI	RAATTY	5 cut(s)	98, 264, 427, 1162, 1473
XbaI	TCTAGA	2 cut(s)	431, 1562
XceI	RCATGY	2 cut(s)	295, 1978
XmiI	GTMKAC	1 cut(s)	1683
XspI	CTAG	5 cut(s)	432, 852, 1545, 1563, 1812
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1404
Zsp2I	ATGCAT	2 cut(s)	998, 1980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.