Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005878

Physical Location & Seq

Genomic Coordinates Forward (+)

48125803 .. 48132672

Gene Structure 6870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0328500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGGTACCCCTCATTTCATTCCACACCTCCACAACACACCCTCTCCTACTACTAACCCCAACCCCGTTCCTCCCCCCCCCCCAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAATTCACCCGCCAAAACCCACAACCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGGTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTCTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCCTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGATGCAGATGCTGCCGTAAAAGCCTCCAGCTCCGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACAGCAGGTTATATACAGAGGTGCCTGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAGCAAGTTGTTTGATATTGTGTACATGGCGAATAGTAAAAGACAGGATGAAGTTGAAAGCTTTAGTAAGTTCAAATTTTCAGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTAAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCAGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACTCAGCAGTGGAAGAAGAAAGTAGTATTTGTCTTGAACAAATCTGATATCTATCGGAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCTCTTGAAGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTACGCAAAACTATCGGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTACAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTTCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGGTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAAAACTCCTTGGAGAATACGTGATATGGCTGCAATCGGACAATGTTCAGGAAGGAAGAATGTACTCAAACACATTTGGAAAGCGATTGCCTTCATTTGTATATCCACAGAGTCAGGTGGATTTGGAGATATTTGAATCTCTGGAAAAAGTAAATAAACACAGCTTGAAAGTGATAGAGGACTTCAGTGCCAATGCTGCTTCCAAATTATTTGAGCAAGAAATACGTGAAGCGTTTCTTGGGACATTTGGTGGGCTAGGAGCAGCTGGTTTATCTGCTTCACTTTTGACAACTGTGCTGCCGACCACTTTGGAAGATCTTCTTGCTCTTGGTCTTTGCTCAGCTGGCGGGTTTATAGCTATATCAAAATTTCCGGCTCGTAGGCAAGAGATGATAGAAAAGGTAAAAAGGACTGCGGATGGCTTGGCACGTGAGGTTGAACAGTCCATGCAGAACGATCTTTCAGAAGCCATTGAGAACATGGAAAGGTTTGTGAAAAATGTCAGCCAGCCGTACCAAGATACAGCACAGCAGAGACTAGACAAACTCCTAGAGCTTCAGGATGAAATATCCAATGTTGATAAACAACTACAAACACTACGAATTGAAATCCAAAATCTTCACGTATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

914

Amino Acids

101.74

Weight (kDa)

5.39

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	362 - 408	8.4e-11	Dynamin family
GTP_EFTU	PF00009	362 - 538	5.2e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	363 - 494	7.2e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	418 - 494	2.5e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42430 AT1G42430
fragaria_vesca	FvH4_2g37530 FvH4_2g37530 FvH4_2g37530 FvH4_2g37530 FvH4_2g37530
malus_domestica	MD07G1011800.v1.1 MD08G1002900.v1.1 MD11G1103700.v1.1 MD15G1002600.v1.1
prunus_persica	Prupe.1G354900_v2.0.a1
pyrus_communis	pycom08g00240 pycom15g00150
rosa_chinensis	RchiOBHm_Chr6g0304201
rosa_laevigata	RLG00000011007
rosa_multiflora	Rmu_co8390907.1_g000001 Rmu_ssc0000218.1_g000011
rosa_roxburghii	Rroxscaffold_7G00163980
rosa_rugosa	Rorug06G0328400 Rorug06G0328500 Rorug06G0328600 Rorug06G0328700
rosa_samantha	Rh6AG442500 Rh6BG460200 Rh6CG454700 Rh6DG441900
rosa_wichuraiana	Rw6G038360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	258
Acc36I	ACCTGC	2 cut(s)	702, 2104
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 204, 727, 902
AccII	CGCG	1 cut(s)	423
AciI	CCGC	7 cut(s)	151, 348, 352, 366, 438, 2460, 2528
AclI	AACGTT	1 cut(s)	1296
AcoI	YGGCCR	2 cut(s)	331, 349
AcsI	RAATTY	4 cut(s)	881, 1100, 1355, 2480
AcuI	CTGAAG	4 cut(s)	184, 270, 2281, 2654
AcvI	CACGTG	2 cut(s)	1967, 2543
AcyI	GRCGYC	2 cut(s)	205, 255
AfaI	GTAC	7 cut(s)	6, 830, 1362, 1439, 1738, 2177, 2627
AfiI	CCNNNNNNNGG	5 cut(s)	241, 361, 1027, 1351, 2070
AflIII	ACRYGT	3 cut(s)	273, 1567, 1966
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	2 cut(s)	730, 1309
AjuI	GAANNNNNNNTTGG	2 cut(s)	2334, 2366
Alw21I	GWGCWC	1 cut(s)	1980
Alw26I	GTCTC	3 cut(s)	304, 387, 2641
AlwNI	CAGNNNCTG	1 cut(s)	572
AoxI	GGCC	5 cut(s)	331, 349, 363, 510, 1854
ApeKI	GCWGC	9 cut(s)	434, 440, 572, 1016, 1878, 2143, 2309, 2375, 2410
ApoI	RAATTY	4 cut(s)	881, 1100, 1355, 2480
AseI	ATTAAT	1 cut(s)	1128
Asp700I	GAANNNNTTC	4 cut(s)	639, 779, 2346, 2430
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	207, 423
AspS9I	GGNCC	3 cut(s)	220, 244, 2093
AsuC2I	CCSGG	2 cut(s)	192, 398
AsuHPI	GGTGA	3 cut(s)	139, 1180, 1229
AvaII	GGWCC	3 cut(s)	220, 244, 2093
BanI	GGYRCC	4 cut(s)	4, 204, 727, 902
BanII	GRGCYC	1 cut(s)	1980
BbrPI	CACGTG	2 cut(s)	1967, 2543
BbsI	GAAGAC	2 cut(s)	258, 470
Bbv12I	GWGCWC	1 cut(s)	1980
BbvI	GCAGC	9 cut(s)	446, 452, 559, 1003, 1890, 2130, 2296, 2387, 2397
BceAI	ACGGC	5 cut(s)	318, 346, 361, 560, 2608
BcgI	CGANNNNNNTGC	2 cut(s)	1635, 1669
BciT130I	CCWGG	2 cut(s)	732, 1311
BcnI	CCSGG	2 cut(s)	192, 398
BcoDI	GTCTC	3 cut(s)	304, 387, 2641
BfaI	CTAG	6 cut(s)	549, 753, 1766, 2369, 2651, 2663
BfoI	RGCGCY	1 cut(s)	208
BfuAI	ACCTGC	2 cut(s)	702, 2104
BglII	AGATCT	2 cut(s)	743, 2428
BlpI	GCTNAGC	1 cut(s)	2452
Bme1390I	CCNGG	4 cut(s)	192, 398, 732, 1311
Bme18I	GGWCC	3 cut(s)	220, 244, 2093
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	3 cut(s)	220, 244, 2093
BmiI	GGNNCC	6 cut(s)	6, 206, 222, 246, 729, 904
BmrFI	CCNGG	4 cut(s)	192, 398, 732, 1311
BmrI	ACTGGG	1 cut(s)	178
BmsI	GCATC	6 cut(s)	553, 559, 777, 790, 1042, 1249
BmuI	ACTGGG	1 cut(s)	178
BpiI	GAAGAC	2 cut(s)	258, 470
BpmI	CTGGAG	2 cut(s)	571, 962
Bpu1102I	GCTNAGC	1 cut(s)	2452
BpuEI	CTTGAG	3 cut(s)	1532, 1718, 2053
BpuMI	CCSGG	2 cut(s)	192, 398
BsaAI	YACGTR	5 cut(s)	1967, 2134, 2339, 2543, 2737
BsaBI	GATNNNNATC	1 cut(s)	1491
BsaHI	GRCGYC	2 cut(s)	205, 255
BsaI	GGTCTC	1 cut(s)	387
BsaJI	CCNNGG	4 cut(s)	190, 906, 1350, 2122
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 2118, 2148
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 361, 1027, 1351, 2070
Bse1I	ACTGG	3 cut(s)	184, 945, 1089
Bse3DI	GCAATG	2 cut(s)	1776, 1917
Bse8I	GATNNNNATC	1 cut(s)	1491
BseBI	CCWGG	2 cut(s)	732, 1311
BseDI	CCNNGG	4 cut(s)	190, 906, 1350, 2122
BseGI	GGATG	7 cut(s)	568, 792, 859, 1219, 1240, 2536, 2680
BseJI	GATNNNNATC	1 cut(s)	1491
BseLI	CCNNNNNNNGG	5 cut(s)	241, 361, 1027, 1351, 2070
BseMI	GCAATG	2 cut(s)	1776, 1917
BseMII	CTCAG	6 cut(s)	408, 754, 1197, 1457, 1682, 2466
BseNI	ACTGG	3 cut(s)	184, 945, 1089
BseRI	GAGGAG	1 cut(s)	1046
BseX3I	CGGCCG	2 cut(s)	331, 349
BseXI	GCAGC	9 cut(s)	446, 452, 559, 1003, 1890, 2130, 2296, 2387, 2397
BseYI	CCCAGC	2 cut(s)	168, 926
BsgI	GTGCAG	3 cut(s)	578, 1575, 2082
Bsh1236I	CGCG	1 cut(s)	423
Bsh1285I	CGRYCG	3 cut(s)	334, 352, 1402
BshFI	GGCC	5 cut(s)	333, 351, 365, 512, 1856
BshNI	GGYRCC	4 cut(s)	4, 204, 727, 902
BsiEI	CGRYCG	3 cut(s)	334, 352, 1402
BsiHKAI	GWGCWC	1 cut(s)	1980
BsiSI	CCGG	3 cut(s)	192, 397, 2486
BslFI	GGGAC	2 cut(s)	206, 2368
BslI	CCNNNNNNNGG	5 cut(s)	241, 361, 1027, 1351, 2070
BsmAI	GTCTC	3 cut(s)	304, 387, 2641
BsmFI	GGGAC	2 cut(s)	206, 2368
BsmI	GAATGC	1 cut(s)	1504
BsnI	GGCC	5 cut(s)	333, 351, 365, 512, 1856
Bso31I	GGTCTC	1 cut(s)	387
Bsp1286I	GDGCHC	1 cut(s)	1980
Bsp1407I	TGTACA	1 cut(s)	828
Bsp1720I	GCTNAGC	1 cut(s)	2452
BspACI	CCGC	7 cut(s)	151, 348, 352, 366, 438, 2460, 2528
BspANI	GGCC	5 cut(s)	333, 351, 365, 512, 1856
BspCNI	CTCAG	6 cut(s)	409, 753, 1198, 1456, 1681, 2465
BspFNI	CGCG	1 cut(s)	423
BspHI	TCATGA	1 cut(s)	1504
BspLI	GGNNCC	6 cut(s)	6, 206, 222, 246, 729, 904
BspMI	ACCTGC	2 cut(s)	702, 2104
BspT107I	GGYRCC	4 cut(s)	4, 204, 727, 902
BspTNI	GGTCTC	1 cut(s)	387
BsrDI	GCAATG	2 cut(s)	1776, 1917
BsrGI	TGTACA	1 cut(s)	828
BsrI	ACTGG	3 cut(s)	184, 945, 1089
BssECI	CCNNGG	4 cut(s)	190, 906, 1350, 2122
BssNI	GRCGYC	2 cut(s)	205, 255
BssT1I	CCWWGG	2 cut(s)	906, 2122
Bst2UI	CCWGG	2 cut(s)	732, 1311
Bst4CI	ACNGT	5 cut(s)	922, 1123, 1617, 2407, 2556
BstACI	GRCGYC	2 cut(s)	205, 255
BstAPI	GCANNNNNTGC	3 cut(s)	446, 572, 1598
BstAUI	TGTACA	1 cut(s)	828
BstBAI	YACGTR	5 cut(s)	1967, 2134, 2339, 2543, 2737
BstC8I	GCNNGC	2 cut(s)	2458, 2621
BstDEI	CTNAG	6 cut(s)	417, 740, 1206, 1443, 1668, 2452
BstENI	CCTNNNNNAGG	2 cut(s)	359, 1349
BstF5I	GGATG	7 cut(s)	568, 792, 859, 1219, 1240, 2536, 2680
BstFNI	CGCG	1 cut(s)	423
BstH2I	RGCGCY	1 cut(s)	208
BstHHI	GCGC	2 cut(s)	207, 423
BstMAI	GTCTC	3 cut(s)	304, 387, 2641
BstMCI	CGRYCG	3 cut(s)	334, 352, 1402
BstMWI	GCNNNNNNNGC	9 cut(s)	204, 440, 446, 572, 581, 1598, 1607, 2309, 2457
BstNI	CCWGG	2 cut(s)	732, 1311
BstNSI	RCATGY	1 cut(s)	1571
BstSCI	CCNGG	4 cut(s)	190, 396, 730, 1309
BstUI	CGCG	1 cut(s)	423
BstV1I	GCAGC	9 cut(s)	446, 452, 559, 1003, 1890, 2130, 2296, 2387, 2397
BstV2I	GAAGAC	2 cut(s)	258, 470
BstX2I	RGATCY	2 cut(s)	743, 2428
BstYI	RGATCY	2 cut(s)	743, 2428
BstZI	CGGCCG	2 cut(s)	331, 349
BsuRI	GGCC	5 cut(s)	333, 351, 365, 512, 1856
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	7 cut(s)	568, 792, 859, 1219, 1240, 2536, 2680
BtsI	GCAGTG	2 cut(s)	1454, 1902
BtsIMutI	CAGTG	5 cut(s)	1022, 1454, 1676, 1902, 2305
BveI	ACCTGC	2 cut(s)	702, 2104
Cac8I	GCNNGC	2 cut(s)	2458, 2621
CaiI	CAGNNNCTG	1 cut(s)	572
CciI	TCATGA	1 cut(s)	1504
CciNI	GCGGCCGC	1 cut(s)	349
CfoI	GCGC	2 cut(s)	207, 423
Cfr13I	GGNCC	3 cut(s)	220, 244, 2093
Csp6I	GTAC	7 cut(s)	5, 829, 1361, 1438, 1737, 2176, 2626
CviAII	CATG	5 cut(s)	832, 1505, 1568, 2560, 2593
CviQI	GTAC	7 cut(s)	5, 829, 1361, 1438, 1737, 2176, 2626
DdeI	CTNAG	6 cut(s)	417, 740, 1206, 1443, 1668, 2452
DinI	GGCGCC	1 cut(s)	206
DraI	TTTAAA	1 cut(s)	667
EaeI	YGGCCR	2 cut(s)	331, 349
EagI	CGGCCG	2 cut(s)	331, 349
Ecl136II	GAGCTC	1 cut(s)	1978
EclXI	CGGCCG	2 cut(s)	331, 349
Eco130I	CCWWGG	2 cut(s)	906, 2122
Eco24I	GRGCYC	1 cut(s)	1980
Eco31I	GGTCTC	1 cut(s)	387
Eco32I	GATATC	3 cut(s)	430, 1151, 1489
Eco47I	GGWCC	3 cut(s)	220, 244, 2093
Eco52I	CGGCCG	2 cut(s)	331, 349
Eco53kI	GAGCTC	1 cut(s)	1978
Eco57I	CTGAAG	4 cut(s)	184, 270, 2281, 2654
Eco72I	CACGTG	2 cut(s)	1967, 2543
EcoICRI	GAGCTC	1 cut(s)	1978
EcoNI	CCTNNNNNAGG	2 cut(s)	359, 1349
EcoO109I	RGGNCCY	2 cut(s)	220, 2093
EcoRII	CCWGG	2 cut(s)	730, 1309
EcoRV	GATATC	3 cut(s)	430, 1151, 1489
EcoT14I	CCWWGG	2 cut(s)	906, 2122
EcoT38I	GRGCYC	1 cut(s)	1980
EgeI	GGCGCC	1 cut(s)	206
EheI	GGCGCC	1 cut(s)	206
ErhI	CCWWGG	2 cut(s)	906, 2122
FaeI	CATG	5 cut(s)	835, 1508, 1571, 2563, 2596
FalI	AAGNNNNNCTT	6 cut(s)	1835, 1867, 2334, 2366, 2418, 2450
FaqI	GGGAC	2 cut(s)	206, 2368
FatI	CATG	5 cut(s)	831, 1504, 1567, 2559, 2592
FauI	CCCGC	2 cut(s)	158, 2453
FokI	GGATG	7 cut(s)	575, 799, 866, 1226, 1227, 2543, 2687
FriOI	GRGCYC	1 cut(s)	1980
FspBI	CTAG	6 cut(s)	549, 753, 1766, 2369, 2651, 2663
GlaI	GCGC	2 cut(s)	206, 422
GsaI	CCCAGC	2 cut(s)	172, 930
GsuI	CTGGAG	2 cut(s)	571, 962
HaeII	RGCGCY	1 cut(s)	208
HaeIII	GGCC	5 cut(s)	333, 351, 365, 512, 1856
HapII	CCGG	3 cut(s)	192, 397, 2486
HhaI	GCGC	2 cut(s)	207, 423
Hin1I	GRCGYC	2 cut(s)	205, 255
Hin1II	CATG	5 cut(s)	835, 1508, 1571, 2563, 2596
Hin6I	GCGC	2 cut(s)	205, 421
HinP1I	GCGC	2 cut(s)	205, 421
HincII	GTYRAC	1 cut(s)	1731
HindII	GTYRAC	1 cut(s)	1731
HindIII	AAGCTT	1 cut(s)	865
HinfI	GANTC	7 cut(s)	316, 457, 524, 1664, 1935, 2224, 2249
HpaII	CCGG	3 cut(s)	192, 397, 2486
HphI	GGTGA	3 cut(s)	139, 1180, 1229
Hpy166II	GTNNAC	3 cut(s)	829, 1440, 1731
Hpy8I	GTNNAC	3 cut(s)	829, 1440, 1731
Hpy99I	CGWCG	4 cut(s)	102, 272, 275, 332
HpyAV	CCTTC	8 cut(s)	590, 769, 1201, 1277, 1442, 1511, 2159, 2214
HpyCH4III	ACNGT	5 cut(s)	922, 1123, 1617, 2407, 2556
HpyCH4IV	ACGT	8 cut(s)	255, 273, 1296, 1966, 2133, 2338, 2542, 2736
HpyF10VI	GCNNNNNNNGC	9 cut(s)	204, 440, 446, 572, 581, 1598, 1607, 2309, 2457
HpyF3I	CTNAG	6 cut(s)	417, 740, 1206, 1443, 1668, 2452
HpySE526I	ACGT	8 cut(s)	255, 273, 1296, 1966, 2133, 2338, 2542, 2736
Hsp92I	GRCGYC	2 cut(s)	205, 255
Hsp92II	CATG	5 cut(s)	835, 1508, 1571, 2563, 2596
HspAI	GCGC	2 cut(s)	205, 421
KasI	GGCGCC	1 cut(s)	204
KpnI	GGTACC	1 cut(s)	8
LmnI	GCTCC	5 cut(s)	596, 599, 1279, 1975, 2372
Lsp1109I	GCAGC	9 cut(s)	446, 452, 559, 1003, 1890, 2130, 2296, 2387, 2397
LweI	GCATC	6 cut(s)	553, 559, 777, 790, 1042, 1249
MaeI	CTAG	6 cut(s)	549, 753, 1766, 2369, 2651, 2663
MaeII	ACGT	8 cut(s)	255, 273, 1296, 1966, 2133, 2338, 2542, 2736
MaeIII	GTNAC	5 cut(s)	691, 763, 1570, 1819, 1962
MfeI	CAATTG	2 cut(s)	239, 1782
MflI	RGATCY	2 cut(s)	743, 2428
MhlI	GDGCHC	1 cut(s)	1980
Mly113I	GGCGCC	1 cut(s)	205
MlyI	GAGTC	1 cut(s)	2233
MmeI	TCCRAC	3 cut(s)	291, 370, 506
MroXI	GAANNNNTTC	4 cut(s)	639, 779, 2346, 2430
MseI	TTAA	7 cut(s)	666, 936, 1104, 1128, 1155, 1284, 1409
MslI	CAYNNNNRTG	2 cut(s)	506, 1245
MspA1I	CMGCKG	2 cut(s)	2378, 2456
MspI	CCGG	3 cut(s)	192, 397, 2486
MspR9I	CCNGG	4 cut(s)	192, 398, 732, 1311
MunI	CAATTG	2 cut(s)	239, 1782
Mva1269I	GAATGC	1 cut(s)	1504
MvaI	CCWGG	2 cut(s)	732, 1311
MvnI	CGCG	1 cut(s)	423
MwoI	GCNNNNNNNGC	9 cut(s)	204, 440, 446, 572, 581, 1598, 1607, 2309, 2457
NarI	GGCGCC	1 cut(s)	205
NciI	CCSGG	2 cut(s)	192, 398
NlaIII	CATG	5 cut(s)	835, 1508, 1571, 2563, 2596
NlaIV	GGNNCC	6 cut(s)	6, 206, 222, 246, 729, 904
NmuCI	GTSAC	4 cut(s)	691, 1570, 1819, 1962
NotI	GCGGCCGC	1 cut(s)	349
NspI	RCATGY	1 cut(s)	1571
PagI	TCATGA	1 cut(s)	1504
PciI	ACATGT	1 cut(s)	1567
PctI	GAATGC	1 cut(s)	1504
PdmI	GAANNNNTTC	4 cut(s)	639, 779, 2346, 2430
PfeI	GAWTC	6 cut(s)	316, 457, 524, 1664, 1935, 2249
Ple19I	CGATCG	1 cut(s)	1402
PleI	GAGTC	1 cut(s)	2232
PluTI	GGCGCC	1 cut(s)	208
PmaCI	CACGTG	2 cut(s)	1967, 2543
PmlI	CACGTG	2 cut(s)	1967, 2543
PpsI	GAGTC	1 cut(s)	2232
Ppu21I	YACGTR	5 cut(s)	1967, 2134, 2339, 2543, 2737
PpuMI	RGGWCCY	2 cut(s)	220, 2093
PscI	ACATGT	1 cut(s)	1567
PshBI	ATTAAT	1 cut(s)	1128
Psp124BI	GAGCTC	1 cut(s)	1980
Psp1406I	AACGTT	1 cut(s)	1296
Psp5II	RGGWCCY	2 cut(s)	220, 2093
Psp6I	CCWGG	2 cut(s)	730, 1309
PspCI	CACGTG	2 cut(s)	1967, 2543
PspFI	CCCAGC	2 cut(s)	168, 926
PspGI	CCWGG	2 cut(s)	730, 1309
PspN4I	GGNNCC	6 cut(s)	6, 206, 222, 246, 729, 904
PspPI	GGNCC	3 cut(s)	220, 244, 2093
PspPPI	RGGWCCY	2 cut(s)	220, 2093
PstNI	CAGNNNCTG	1 cut(s)	572
PsuI	RGATCY	2 cut(s)	743, 2428
PvuI	CGATCG	1 cut(s)	1402
PvuII	CAGCTG	2 cut(s)	2378, 2456
RsaI	GTAC	7 cut(s)	6, 830, 1362, 1439, 1738, 2177, 2627
RsaNI	GTAC	7 cut(s)	5, 829, 1361, 1438, 1737, 2176, 2626
RseI	CAYNNNNRTG	2 cut(s)	506, 1245
SacI	GAGCTC	1 cut(s)	1980
SaqAI	TTAA	7 cut(s)	666, 936, 1104, 1128, 1155, 1284, 1409
Sau96I	GGNCC	3 cut(s)	220, 244, 2093
SchI	GAGTC	1 cut(s)	2233
ScrFI	CCNGG	4 cut(s)	192, 398, 732, 1311
SduI	GDGCHC	1 cut(s)	1980
SfaNI	GCATC	6 cut(s)	553, 559, 777, 790, 1042, 1249
SfoI	GGCGCC	1 cut(s)	206
SinI	GGWCC	3 cut(s)	220, 244, 2093
SmiMI	CAYNNNNRTG	2 cut(s)	506, 1245
SmlI	CTYRAG	3 cut(s)	1511, 1697, 2068
SmoI	CTYRAG	3 cut(s)	1511, 1697, 2068
SsiI	CCGC	7 cut(s)	151, 348, 352, 366, 438, 2460, 2528
SspDI	GGCGCC	1 cut(s)	204
SspMI	CTAG	6 cut(s)	549, 753, 1766, 2369, 2651, 2663
SstI	GAGCTC	1 cut(s)	1980
StyD4I	CCNGG	4 cut(s)	190, 396, 730, 1309
StyI	CCWWGG	2 cut(s)	906, 2122
TaaI	ACNGT	5 cut(s)	922, 1123, 1617, 2407, 2556
TaiI	ACGT	8 cut(s)	258, 276, 1299, 1969, 2136, 2341, 2545, 2739
TaqI	TCGA	3 cut(s)	288, 327, 966
TatI	WGTACW	3 cut(s)	828, 1736, 2175
TauI	GCSGC	4 cut(s)	351, 354, 368, 440
TfiI	GAWTC	6 cut(s)	316, 457, 524, 1664, 1935, 2249
Tru1I	TTAA	7 cut(s)	666, 936, 1104, 1128, 1155, 1284, 1409
Tru9I	TTAA	7 cut(s)	666, 936, 1104, 1128, 1155, 1284, 1409
TscAI	CASTG	5 cut(s)	1029, 1454, 1676, 1902, 2305
TseFI	GTSAC	4 cut(s)	691, 1570, 1819, 1962
TseI	GCWGC	9 cut(s)	434, 440, 572, 1016, 1878, 2143, 2309, 2375, 2410
Tsp45I	GTSAC	4 cut(s)	691, 1570, 1819, 1962
TspDTI	ATGAA	9 cut(s)	6, 693, 870, 952, 1307, 1519, 1769, 2196, 2691
TspRI	CASTG	5 cut(s)	1029, 1454, 1676, 1902, 2305
VpaK11BI	GGWCC	3 cut(s)	220, 244, 2093
VspI	ATTAAT	1 cut(s)	1128
XagI	CCTNNNNNAGG	2 cut(s)	359, 1349
XapI	RAATTY	4 cut(s)	881, 1100, 1355, 2480
XceI	RCATGY	1 cut(s)	1571
XcmI	CCANNNNNNNNNTGG	3 cut(s)	191, 1849, 2590
XmnI	GAANNNNTTC	4 cut(s)	639, 779, 2346, 2430
XspI	CTAG	6 cut(s)	549, 753, 1766, 2369, 2651, 2663
ZraI	GACGTC	1 cut(s)	256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.