Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005878

Physical Location & Seq

Genomic Coordinates Reverse (-)

48179676 .. 48184770

Gene Structure 5095 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0328700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCAGTACAACCTACCTACAGCGGAAGACGCACCGGCGTCCGGGTAGTGGTCGCCGGCGACCGCGGCACCGGCAAGTCCAGCTTGATCGTTGCACTGGCCACGGAAACCTTCGCCGATAACCTACCTCCGGTGCTTCCCCCCACCACCCTCCCCGCCGATTTGTATCCCGATCGTATTCCCGTCACCGTCATCGACACCTCATCCAGCATGGAGAGTAGTATGAAGCGCAGCGAAGAACTGAAGCGAGCTGATGTAGTGATGCTGACGTACGCCTGTGATCAGCCAATGACGCTTAGCCGTATCTCCAGTTACTGGCTCCCTGAGCTTCGTCGGTTGGAGGTGAATGTACCAGTAATTTTGGTTGGATGCAAGTTAGATTTGAGGGACGAGCATGATCCGATGAACATGGAGGCGGTGATGACACCAATCATGCAGCGGTATAGGGAAATCGAGACTTGCATCGAGTGTTCTGCTGCTACTTTTCTGCAGGTTCCGGATGCATTCTATTATGCTCAGAAGGCAGTTCTTCATCCAACATTGCCTTTGTTTGATCAAGAAACACAGTCTCTGCAACCCCGTTGTGTTAGTGCTTTGAGAAGGATATTTACTCTTTGCGATCATGACATGGATGGTGCCCTCAATGATCAAGAGCTGAATGGATTCCAGGTTAAGTGTTTTAATGCTCCACTACAACCTGAAGAGATTATAGGAGTTCAAAGGGTTGTACAGGAGAAATTACCAGAAGGAGTCAACGAGAATGGTCTTACCCTTGATGGTTTCCTTTTTCTCCATGCCCTTTTCATTGAGAAAGGGCGTCTTGAGACAACTTGGGCTGTCATGAGAAAATTTGGATATGAAGATGATTTAAAACTCAGGGATGATTTTCTCACACTTCCTTTCAAGGCGGCTCCGGATCAGAGTGTGGAGCTAACAACTGAAGCTTTGGAATTCCTGAGGGGGATATTCAGATTACATGACACTGATAATGATGGAGCTGTACGACCTACTGAGCTTGATATGCTATTTGCTACTGCTCCAGAAAGTCCTTGGAGTGAGATTCCTTATCTGGATGCTGCAGAGAGAACAGCATTGGGTGATTTAACGCTCAATGGATTTCTATCCGAGTGGGCCCTTATGACACTAATAGATCCAAAGAAAAGTATGGCTAATTTGATATACATTGGATACCGCGGTGATCCTGCTTCTGCCCTCCATCTTACTAGAAGAAGAAAAGTTGATCGTAAAAAGCAAAAGACTGAAAGAAATGTTTTCAATTGCTTTGTCTTTGGTCCTAAAAATGCAGGAAAGTCTGCTATTATCAATTCATTCATAGAAAGGCCTTTTTCAAAGAGTGGCACTACCACAACTGGTGAGCGTTGGGCAGTGAATGCTGTTGACGAGATTGGGGGGAATAAGAAGACTCTTGTATTGAGAGAGATACCAGAAGATGAAGTTAAAAAACTCTTGTCCAAAAAGAACTCTTTGGCAGCCTGTGATGTAGCTGTCTTTGTCTATGACAGTTCAGATGAACGTTCATGGAAAAGATCAAAAGAACTCCTTGCAGAGGTTGCTAGGAAAGGAGATGAAAGTGAAGACTATCTTGTACCTTGTCTCCTTATTGCTGCCAAGGATGATCTGGATCCATATCCAATGGCAGTGCGAGATTCTCTTGGGATTAGTCAAGAATTAGGCATAGAGGCACCTATCCGTGTGAGCATGAAGCAGAGCAATTTGAATAATGTATTTGGTAGAATTGTATATGCAGCTGAGCACCCTCATTTGAGCATTCCTGAAACTGAGACTAGGAAGAACCGCAAGAAGTACCGCCAGCTTTTCAATCGATCTCTTACCTTTGTCTCAGTTGGGACTGCTGCTGCTGTAGTTGGACTTGTAGCCTACCGTGCCTATGCAGCAAGGAAAAGCGCTTCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0012505 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

O-FucT

Protein Analysis

645

Amino Acids

72.22

Weight (kDa)

5.75

Isoelectric Point (pI)

48.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ras	PF00071	15 - 176	2.5e-14	Ras family
EF_assoc_2	PF08356	230 - 314	7.9e-32	EF hand associated
EF_assoc_1	PF08355	351 - 419	3.9e-22	EF hand associated
Ras	PF00071	428 - 586	9.2e-07	Ras family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42430 AT1G42430
fragaria_vesca	FvH4_2g37530 FvH4_2g37530 FvH4_2g37530 FvH4_2g37530 FvH4_2g37530
malus_domestica	MD07G1011800.v1.1 MD08G1002900.v1.1 MD11G1103700.v1.1 MD15G1002600.v1.1
prunus_persica	Prupe.1G354900_v2.0.a1
pyrus_communis	pycom08g00240 pycom15g00150
rosa_chinensis	RchiOBHm_Chr6g0304201
rosa_laevigata	RLG00000011007
rosa_multiflora	Rmu_co8390907.1_g000001 Rmu_ssc0000218.1_g000011
rosa_roxburghii	Rroxscaffold_7G00163980
rosa_rugosa	Rorug06G0328400 Rorug06G0328500 Rorug06G0328600 Rorug06G0328700
rosa_samantha	Rh6AG442500 Rh6BG460200 Rh6CG454700 Rh6DG441900
rosa_wichuraiana	Rw6G038360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	481
AccB1I	GGYRCC	3 cut(s)	68, 635, 1702
AccB7I	CCANNNNNTGG	1 cut(s)	315
AccII	CGCG	2 cut(s)	66, 1194
AccIII	TCCGGA	2 cut(s)	496, 913
AclI	AACGTT	1 cut(s)	1534
AclWI	GGATC	6 cut(s)	392, 924, 1145, 1193, 1637, 1650
AcoI	YGGCCR	1 cut(s)	99
AcsI	RAATTY	2 cut(s)	848, 950
AcuI	CTGAAG	3 cut(s)	263, 720, 960
AcyI	GRCGYC	2 cut(s)	39, 817
AfaI	GTAC	7 cut(s)	9, 272, 351, 729, 1002, 1608, 1826
AfeI	AGCGCT	1 cut(s)	1927
AfiI	CCNNNNNNNGG	5 cut(s)	42, 49, 130, 315, 1567
AgsI	TTSAA	6 cut(s)	719, 904, 1276, 1350, 1738, 1840
AjnI	CCWGG	1 cut(s)	666
Alw21I	GWGCWC	1 cut(s)	1776
Alw26I	GTCTC	6 cut(s)	449, 573, 818, 1619, 1796, 1864
AlwI	GGATC	6 cut(s)	392, 924, 1145, 1193, 1637, 1650
AlwNI	CAGNNNCTG	2 cut(s)	315, 571
Aor13HI	TCCGGA	2 cut(s)	496, 913
Aor51HI	AGCGCT	1 cut(s)	1927
AoxI	GGCC	3 cut(s)	99, 1131, 1340
ApaI	GGGCCC	1 cut(s)	1135
ApoI	RAATTY	2 cut(s)	848, 950
Asp700I	GAANNNNTTC	1 cut(s)	662
AspLEI	GCGC	2 cut(s)	231, 1928
AspS9I	GGNCC	3 cut(s)	1131, 1132, 1292
AsuC2I	CCSGG	1 cut(s)	44
AsuHPI	GGTGA	6 cut(s)	178, 355, 430, 1109, 1208, 1385
AvaII	GGWCC	1 cut(s)	1292
AxyI	CCTNAGG	1 cut(s)	956
BaeGI	GKGCMC	2 cut(s)	640, 1135
BaeI	ACNNNNGTAYC	2 cut(s)	1180, 1213
BalI	TGGCCA	1 cut(s)	101
BamHI	GGATCC	1 cut(s)	1642
BanI	GGYRCC	3 cut(s)	68, 635, 1702
BanII	GRGCYC	1 cut(s)	1135
BarI	GAAGNNNNNNTAC	2 cut(s)	592, 624
BbsI	GAAGAC	3 cut(s)	34, 1427, 1602
Bbv12I	GWGCWC	1 cut(s)	1776
BccI	CCATC	4 cut(s)	626, 770, 986, 1224
BceAI	ACGGC	1 cut(s)	285
BcgI	CGANNNNNNTGC	2 cut(s)	455, 489
BciT130I	CCWGG	1 cut(s)	668
BciVI	GTATCC	2 cut(s)	177, 1181
BclI	TGATCA	3 cut(s)	280, 553, 646
BcnI	CCSGG	1 cut(s)	44
BcoDI	GTCTC	6 cut(s)	449, 573, 818, 1619, 1796, 1864
BfaI	CTAG	3 cut(s)	1224, 1575, 1806
BfmI	CTRYAG	4 cut(s)	19, 488, 1077, 1881
BfoI	RGCGCY	1 cut(s)	1929
BfuAI	ACCTGC	1 cut(s)	481
BfuI	GTATCC	2 cut(s)	177, 1181
BlpI	GCTNAGC	2 cut(s)	296, 1770
Bme1390I	CCNGG	2 cut(s)	44, 668
Bme18I	GGWCC	1 cut(s)	1292
BmgT120I	GGNCC	3 cut(s)	1131, 1132, 1292
BmiI	GGNNCC	8 cut(s)	70, 320, 495, 637, 912, 1133, 1644, 1704
BmrFI	CCNGG	2 cut(s)	44, 668
BmsI	GCATC	5 cut(s)	252, 359, 471, 490, 1063
BpiI	GAAGAC	3 cut(s)	34, 1427, 1602
BpmI	CTGGAG	2 cut(s)	292, 1023
Bpu10I	CCTNAGC	1 cut(s)	324
Bpu1102I	GCTNAGC	2 cut(s)	296, 1770
BpuEI	CTTGAG	1 cut(s)	842
BpuMI	CCSGG	1 cut(s)	44
Bsa29I	ATCGAT	1 cut(s)	1843
BsaBI	GATNNNNATC	4 cut(s)	165, 1120, 1641, 1647
BsaHI	GRCGYC	2 cut(s)	39, 817
BsaJI	CCNNGG	5 cut(s)	64, 102, 1049, 1192, 1629
BsaWI	WCCGGW	3 cut(s)	130, 496, 913
BsaXI	ACNNNNNCTCC	2 cut(s)	1599, 1629
Bsc4I	CCNNNNNNNGG	5 cut(s)	42, 49, 130, 315, 1567
Bse118I	RCCGGY	3 cut(s)	35, 56, 71
Bse1I	ACTGG	5 cut(s)	102, 309, 320, 353, 1375
Bse21I	CCTNAGG	1 cut(s)	956
Bse3DI	GCAATG	1 cut(s)	539
Bse8I	GATNNNNATC	4 cut(s)	165, 1120, 1641, 1647
BseAI	TCCGGA	2 cut(s)	496, 913
BseBI	CCWGG	1 cut(s)	668
BseCI	ATCGAT	1 cut(s)	1843
BseDI	CCNNGG	5 cut(s)	64, 102, 1049, 1192, 1629
BseGI	GGATG	8 cut(s)	203, 374, 505, 532, 637, 886, 1078, 1639
BseJI	GATNNNNATC	4 cut(s)	165, 1120, 1641, 1647
BseLI	CCNNNNNNNGG	5 cut(s)	42, 49, 130, 315, 1567
BseMI	GCAATG	1 cut(s)	539
BseMII	CTCAG	8 cut(s)	315, 530, 889, 947, 1002, 1761, 1791, 1875
BseNI	ACTGG	5 cut(s)	102, 309, 320, 353, 1375
BseSI	GKGCMC	2 cut(s)	640, 1135
Bsh1236I	CGCG	2 cut(s)	66, 1194
Bsh1285I	CGRYCG	2 cut(s)	64, 175
BshFI	GGCC	3 cut(s)	101, 1133, 1342
BshNI	GGYRCC	3 cut(s)	68, 635, 1702
BshVI	ATCGAT	1 cut(s)	1843
BsiEI	CGRYCG	2 cut(s)	64, 175
BsiHKAI	GWGCWC	1 cut(s)	1776
BsiSI	CCGG	7 cut(s)	36, 43, 57, 72, 131, 497, 914
BsiWI	CGTACG	1 cut(s)	270
BslFI	GGGAC	2 cut(s)	401, 1882
BslI	CCNNNNNNNGG	5 cut(s)	42, 49, 130, 315, 1567
BsmAI	GTCTC	6 cut(s)	449, 573, 818, 1619, 1796, 1864
BsmFI	GGGAC	2 cut(s)	401, 1882
BsmI	GAATGC	3 cut(s)	503, 1396, 1788
BsnI	GGCC	3 cut(s)	101, 1133, 1342
Bsp120I	GGGCCC	1 cut(s)	1131
Bsp1286I	GDGCHC	3 cut(s)	640, 1135, 1776
Bsp13I	TCCGGA	2 cut(s)	496, 913
Bsp1407I	TGTACA	1 cut(s)	727
Bsp1720I	GCTNAGC	2 cut(s)	296, 1770
BspANI	GGCC	3 cut(s)	101, 1133, 1342
BspCNI	CTCAG	8 cut(s)	316, 529, 888, 948, 1003, 1762, 1792, 1874
BspDI	ATCGAT	1 cut(s)	1843
BspEI	TCCGGA	2 cut(s)	496, 913
BspFNI	CGCG	2 cut(s)	66, 1194
BspHI	TCATGA	2 cut(s)	622, 840
BspLI	GGNNCC	8 cut(s)	70, 320, 495, 637, 912, 1133, 1644, 1704
BspMAI	CTGCAG	2 cut(s)	492, 1081
BspMI	ACCTGC	1 cut(s)	481
BspPI	GGATC	6 cut(s)	392, 924, 1145, 1193, 1637, 1650
BspT107I	GGYRCC	3 cut(s)	68, 635, 1702
BsrDI	GCAATG	1 cut(s)	539
BsrFI	RCCGGY	3 cut(s)	35, 56, 71
BsrGI	TGTACA	1 cut(s)	727
BsrI	ACTGG	5 cut(s)	102, 309, 320, 353, 1375
BssAI	RCCGGY	3 cut(s)	35, 56, 71
BssECI	CCNNGG	5 cut(s)	64, 102, 1049, 1192, 1629
BssNI	GRCGYC	2 cut(s)	39, 817
BssT1I	CCWWGG	2 cut(s)	1049, 1629
Bst2UI	CCWGG	1 cut(s)	668
Bst4CI	ACNGT	4 cut(s)	190, 567, 1523, 1904
Bst6I	CTCTTC	1 cut(s)	696
BstACI	GRCGYC	2 cut(s)	39, 817
BstAPI	GCANNNNNTGC	2 cut(s)	1391, 1571
BstAUI	TGTACA	1 cut(s)	727
BstC8I	GCNNGC	3 cut(s)	58, 249, 1832
BstDSI	CCRYGG	3 cut(s)	64, 102, 1192
BstENI	CCTNNNNNAGG	1 cut(s)	1565
BstF5I	GGATG	8 cut(s)	203, 374, 505, 532, 637, 886, 1078, 1639
BstFNI	CGCG	2 cut(s)	66, 1194
BstH2I	RGCGCY	1 cut(s)	1929
BstHHI	GCGC	2 cut(s)	231, 1928
BstMAI	GTCTC	6 cut(s)	449, 573, 818, 1619, 1796, 1864
BstMCI	CGRYCG	2 cut(s)	64, 175
BstNI	CCWGG	1 cut(s)	668
BstSCI	CCNGG	2 cut(s)	42, 666
BstSFI	CTRYAG	4 cut(s)	19, 488, 1077, 1881
BstSLI	GKGCMC	2 cut(s)	640, 1135
BstUI	CGCG	2 cut(s)	66, 1194
BstV2I	GAAGAC	3 cut(s)	34, 1427, 1602
BstX2I	RGATCY	2 cut(s)	1150, 1642
BstYI	RGATCY	2 cut(s)	1150, 1642
Bsu15I	ATCGAT	1 cut(s)	1843
Bsu36I	CCTNAGG	1 cut(s)	956
BsuI	GTATCC	2 cut(s)	177, 1181
BsuRI	GGCC	3 cut(s)	101, 1133, 1342
BsuTUI	ATCGAT	1 cut(s)	1843
BtgI	CCRYGG	3 cut(s)	64, 102, 1192
BtsCI	GGATG	8 cut(s)	203, 374, 505, 532, 637, 886, 1078, 1639
BtsI	GCAGTG	2 cut(s)	1392, 1665
BtsIMutI	CAGTG	4 cut(s)	95, 981, 1392, 1665
BveI	ACCTGC	1 cut(s)	481
Cac8I	GCNNGC	3 cut(s)	58, 249, 1832
CaiI	CAGNNNCTG	2 cut(s)	315, 571
CciI	TCATGA	2 cut(s)	622, 840
CfoI	GCGC	2 cut(s)	231, 1928
Cfr10I	RCCGGY	3 cut(s)	35, 56, 71
Cfr13I	GGNCC	3 cut(s)	1131, 1132, 1292
Cfr42I	CCGCGG	2 cut(s)	67, 1195
ClaI	ATCGAT	1 cut(s)	1843
CseI	GACGC	4 cut(s)	28, 39, 301, 806
Csp6I	GTAC	7 cut(s)	8, 271, 350, 728, 1001, 1607, 1825
CviQI	GTAC	7 cut(s)	8, 271, 350, 728, 1001, 1607, 1825
DraI	TTTAAA	1 cut(s)	870
EaeI	YGGCCR	1 cut(s)	99
Eam1104I	CTCTTC	1 cut(s)	696
EarI	CTCTTC	1 cut(s)	696
Eco130I	CCWWGG	2 cut(s)	1049, 1629
Eco147I	AGGCCT	1 cut(s)	1342
Eco24I	GRGCYC	1 cut(s)	1135
Eco47I	GGWCC	1 cut(s)	1292
Eco47III	AGCGCT	1 cut(s)	1927
Eco57I	CTGAAG	3 cut(s)	263, 720, 960
Eco81I	CCTNAGG	1 cut(s)	956
EcoNI	CCTNNNNNAGG	1 cut(s)	1565
EcoO109I	RGGNCCY	1 cut(s)	1132
EcoRI	GAATTC	1 cut(s)	950
EcoRII	CCWGG	1 cut(s)	666
EcoT14I	CCWWGG	2 cut(s)	1049, 1629
EcoT22I	ATGCAT	1 cut(s)	505
EcoT38I	GRGCYC	1 cut(s)	1135
ErhI	CCWWGG	2 cut(s)	1049, 1629
FalI	AAGNNNNNCTT	8 cut(s)	68, 100, 804, 836, 1545, 1577, 1587, 1619
FaqI	GGGAC	2 cut(s)	401, 1882
FauI	CCCGC	1 cut(s)	163
FbaI	TGATCA	3 cut(s)	280, 553, 646
FokI	GGATG	8 cut(s)	190, 381, 512, 519, 644, 893, 1085, 1646
FriOI	GRGCYC	1 cut(s)	1135
FspBI	CTAG	3 cut(s)	1224, 1575, 1806
GlaI	GCGC	2 cut(s)	230, 1927
GsuI	CTGGAG	2 cut(s)	292, 1023
HaeII	RGCGCY	1 cut(s)	1929
HaeIII	GGCC	3 cut(s)	101, 1133, 1342
HapII	CCGG	7 cut(s)	36, 43, 57, 72, 131, 497, 914
HgaI	GACGC	4 cut(s)	28, 39, 301, 806
HhaI	GCGC	2 cut(s)	231, 1928
Hin1I	GRCGYC	2 cut(s)	39, 817
Hin6I	GCGC	2 cut(s)	229, 1926
HinP1I	GCGC	2 cut(s)	229, 1926
HincII	GTYRAC	2 cut(s)	754, 1399
HindII	GTYRAC	2 cut(s)	754, 1399
HindIII	AAGCTT	1 cut(s)	942
HinfI	GANTC	5 cut(s)	663, 750, 1060, 1423, 1667
HpaII	CCGG	7 cut(s)	36, 43, 57, 72, 131, 497, 914
HphI	GGTGA	6 cut(s)	178, 355, 430, 1109, 1208, 1385
Hpy166II	GTNNAC	2 cut(s)	754, 1399
Hpy188I	TCNGA	6 cut(s)	402, 519, 921, 971, 1126, 1528
Hpy8I	GTNNAC	2 cut(s)	754, 1399
Hpy99I	CGWCG	1 cut(s)	336
HpyAV	CCTTC	4 cut(s)	121, 514, 594, 740
HpyCH4III	ACNGT	4 cut(s)	190, 567, 1523, 1904
HpyCH4IV	ACGT	2 cut(s)	269, 1534
HpySE526I	ACGT	2 cut(s)	269, 1534
Hsp92I	GRCGYC	2 cut(s)	39, 817
HspAI	GCGC	2 cut(s)	229, 1926
Kpn2I	TCCGGA	2 cut(s)	496, 913
KroI	GCCGGC	1 cut(s)	56
KroNI	GCCGGC	1 cut(s)	58
Ksp22I	TGATCA	3 cut(s)	280, 553, 646
KspI	CCGCGG	2 cut(s)	67, 1195
LmnI	GCTCC	6 cut(s)	324, 691, 916, 928, 995, 1042
LweI	GCATC	5 cut(s)	252, 359, 471, 490, 1063
MaeI	CTAG	3 cut(s)	1224, 1575, 1806
MaeII	ACGT	2 cut(s)	269, 1534
MaeIII	GTNAC	2 cut(s)	184, 311
MfeI	CAATTG	1 cut(s)	1276
MflI	RGATCY	2 cut(s)	1150, 1642
MhlI	GDGCHC	3 cut(s)	640, 1135, 1776
MlsI	TGGCCA	1 cut(s)	101
MluNI	TGGCCA	1 cut(s)	101
MlyI	GAGTC	2 cut(s)	759, 1417
MmeI	TCCRAC	4 cut(s)	318, 346, 560, 1867
Mox20I	TGGCCA	1 cut(s)	101
Mph1103I	ATGCAT	1 cut(s)	505
MreI	CGCCGGCG	1 cut(s)	56
MroI	TCCGGA	2 cut(s)	496, 913
MroNI	GCCGGC	1 cut(s)	56
MroXI	GAANNNNTTC	1 cut(s)	662
MscI	TGGCCA	1 cut(s)	101
MseI	TTAA	5 cut(s)	672, 681, 869, 1103, 1458
Msp20I	TGGCCA	1 cut(s)	101
MspA1I	CMGCKG	5 cut(s)	24, 66, 439, 1194, 1769
MspI	CCGG	7 cut(s)	36, 43, 57, 72, 131, 497, 914
MspR9I	CCNGG	2 cut(s)	44, 668
MunI	CAATTG	1 cut(s)	1276
Mva1269I	GAATGC	3 cut(s)	503, 1396, 1788
MvaI	CCWGG	1 cut(s)	668
MvnI	CGCG	2 cut(s)	66, 1194
NaeI	GCCGGC	1 cut(s)	58
NciI	CCSGG	1 cut(s)	44
NgoMIV	GCCGGC	1 cut(s)	56
NlaIV	GGNNCC	8 cut(s)	70, 320, 495, 637, 912, 1133, 1644, 1704
NmuCI	GTSAC	1 cut(s)	184
NsiI	ATGCAT	1 cut(s)	505
PagI	TCATGA	2 cut(s)	622, 840
PceI	AGGCCT	1 cut(s)	1342
PctI	GAATGC	3 cut(s)	503, 1396, 1788
PdiI	GCCGGC	1 cut(s)	58
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	3 cut(s)	663, 1060, 1667
Pfl23II	CGTACG	1 cut(s)	270
PflMI	CCANNNNNTGG	1 cut(s)	315
Ple19I	CGATCG	1 cut(s)	175
PleI	GAGTC	2 cut(s)	758, 1417
PpsI	GAGTC	2 cut(s)	758, 1417
Psp1406I	AACGTT	1 cut(s)	1534
Psp6I	CCWGG	1 cut(s)	666
PspGI	CCWGG	1 cut(s)	666
PspLI	CGTACG	1 cut(s)	270
PspN4I	GGNNCC	8 cut(s)	70, 320, 495, 637, 912, 1133, 1644, 1704
PspOMI	GGGCCC	1 cut(s)	1131
PspPI	GGNCC	3 cut(s)	1131, 1132, 1292
PstI	CTGCAG	2 cut(s)	492, 1081
PstNI	CAGNNNCTG	2 cut(s)	315, 571
PsuI	RGATCY	2 cut(s)	1150, 1642
PvuI	CGATCG	1 cut(s)	175
PvuII	CAGCTG	1 cut(s)	1769
RsaI	GTAC	7 cut(s)	9, 272, 351, 729, 1002, 1608, 1826
RsaNI	GTAC	7 cut(s)	8, 271, 350, 728, 1001, 1607, 1825
SacII	CCGCGG	2 cut(s)	67, 1195
SaqAI	TTAA	5 cut(s)	672, 681, 869, 1103, 1458
Sau96I	GGNCC	3 cut(s)	1131, 1132, 1292
SchI	GAGTC	2 cut(s)	759, 1417
ScrFI	CCNGG	2 cut(s)	44, 668
SduI	GDGCHC	3 cut(s)	640, 1135, 1776
SfaNI	GCATC	5 cut(s)	252, 359, 471, 490, 1063
SfcI	CTRYAG	4 cut(s)	19, 488, 1077, 1881
Sfr303I	CCGCGG	2 cut(s)	67, 1195
SgrAI	CRCCGGYG	2 cut(s)	35, 56
SgrBI	CCGCGG	2 cut(s)	67, 1195
SinI	GGWCC	1 cut(s)	1292
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
SseBI	AGGCCT	1 cut(s)	1342
SspMI	CTAG	3 cut(s)	1224, 1575, 1806
StuI	AGGCCT	1 cut(s)	1342
StyD4I	CCNGG	2 cut(s)	42, 666
StyI	CCWWGG	2 cut(s)	1049, 1629
TaaI	ACNGT	4 cut(s)	190, 567, 1523, 1904
TaiI	ACGT	2 cut(s)	272, 1537
TaqI	TCGA	4 cut(s)	195, 453, 465, 1843
TatI	WGTACW	2 cut(s)	7, 727
TauI	GCSGC	2 cut(s)	69, 911
TfiI	GAWTC	3 cut(s)	663, 1060, 1667
Tru1I	TTAA	5 cut(s)	672, 681, 869, 1103, 1458
Tru9I	TTAA	5 cut(s)	672, 681, 869, 1103, 1458
TscAI	CASTG	4 cut(s)	102, 988, 1392, 1665
TseFI	GTSAC	1 cut(s)	184
Tsp45I	GTSAC	1 cut(s)	184
TspGWI	ACGGA	2 cut(s)	119, 1700
TspRI	CASTG	4 cut(s)	102, 988, 1392, 1665
Van91I	CCANNNNNTGG	1 cut(s)	315
VpaK11BI	GGWCC	1 cut(s)	1292
XagI	CCTNNNNNAGG	1 cut(s)	1565
XapI	RAATTY	2 cut(s)	848, 950
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1047, 1636
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	3 cut(s)	1224, 1575, 1806
Zsp2I	ATGCAT	1 cut(s)	505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.