Rorug06G0348900

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0004740
Physical Location & Seq
Forward (+)
49907113 .. 49910276
3164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0348900.1

Sequence Viewer

Length: 1347 bp
ATGGCTATGGCTGCTCAGGCTCTGCACCAGCAATGTCTCTGCTTCTCCTCAAACCCAATAACAACATCAACAACAAGGCCATGGCTTCCCGCCAGAACCACCACCCTTACCTTTTTCCAAGTCCACAAGAAATTTGCCCATCACATCTCTCTCATTCCTTGCTCTTCTTCTTCAACTTCTCAGTCCCCTGAAGCCAATACAGAAACCGCCGAGTCCTGTGTCAACTTGGGCCTCCAGCTTTTCTCCAAAGGACGGGTTAAAGATGCTTTAGTTCAGTTCGAAACGGCACTTAATTTAGATCCCAATCCTATAGAGGCCCAAGCAGCTCTCTATAATAAAGCTTGCTGTCACGCCTACAGAGGGGAAGGAAGGAAAGCTGCTGATTGTCTACGTACTTGCTTAAGAGAATATAACCTCAAATTTGGCACAATTTTGAATGACCCTGACTTGGCCTCTTTTCGAGCTTTGCCTGAGTATAAGGAATTGCAAGAAGAGGCTAGAATAGGTGGAGAAGACATAGGCTACAGTTTTAGGAGAGACTTGAAACTTATTAGTGAAGTCCAAGCACCATTCCGTGGGGTTAGGAGATTCTTTTATGTGGCATTCTCTGCAGCTGCAGGAATCTCGACGTTCTTCACTGTACCTAGGCTATTCCGTGCATTTGCAGGTGGTGATGGTGCTCCTGATCTCTTGGAAACTGCTGGGAATGTTGCTATTAATGTCGGAGGTTTTACAGTTCTTGTGGCATTGTTTTTATGGGAAAACAAGAAGGAAGAGGAACAACTTGCACAAATATCTCGTAATGAAAGTCTGTCAAGGCTGCCATTGCGCCTCTCCACCAATAGGGTTGTTGAACTTGTGCAGTTGCGGGACACTGTTAGACCTGTCATTTTAGCAGGGAAGAAGGAGACTGTTTCTTCAAGCATGCAGCAGGCAGCGAGGTTCCGAACGGATCTCCTCTCAAGAGGTGTTCTTTTAGTTCCTGTTATCTGGGGTGAAGTTAGGGCACCTCAAACAGAGAAGAAAGGCTTTGGCACACCTTCAAAGGCAGCCGCCGCTCTGCCTTCTATTGGGGAAGATTTCGAGAAACGAACTCAGTCTATAACTGCAAAGTCAAAATTAAAAGCTGAAATTCGATTCAAGGCCGAGATTGTATCCCCTGAGGAATGGGAAAGTTGGATAAGGGATCAGCAGAAGTCTGAAGGAGTCACTCCTGGTGAGGATGTCTACATTATACTGCGCCTAGATGGTCGGGTTCGAAGATCAGGGAAAGGCATGCCTGACTGGCAACAAATTTTGCAGGAGCTGCCTCCAGTAGAAGCATTGCTTAGCAAACTTGAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0000209 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004706 GO:0004709 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006508 GO:0006511 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007254 GO:0007256 GO:0007346 GO:0008150 GO:0008152 GO:0008289 GO:0008432 GO:0009056 GO:0009057 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0010639 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0022607 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0031434 GO:0032147 GO:0032231 GO:0032232 GO:0032268 GO:0032270 GO:0032446 GO:0032872 GO:0032874 GO:0032956 GO:0032970 GO:0033043 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043506 GO:0043507 GO:0043549 GO:0043632 GO:0043900 GO:0043902 GO:0043903 GO:0043933 GO:0044085 GO:0044087 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0046328 GO:0046330 GO:0046625 GO:0046777 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0048583 GO:0048584 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051019 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051259 GO:0051338 GO:0051347 GO:0051403 GO:0051493 GO:0051494 GO:0051603 GO:0051716 GO:0051726 GO:0060255 GO:0065003 GO:0065007 GO:0065009 GO:0070302 GO:0070304 GO:0070647 GO:0071704 GO:0071840 GO:0071900 GO:0071902 GO:0080090 GO:0080134 GO:0080135 GO:0110053 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1902531 GO:1902533 GO:1902680 GO:1902903 GO:1902904 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SWIM zf-RING_2

Protein Analysis

448

Amino Acids

49.82

Weight (kDa)

8.92

Isoelectric Point (pI)

52.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3493 PF11998 178 - 255 4.4e-24 Low psii accumulation1 / Rep27
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 656
AccB1I GGYRCC 1 cut(s) 1006
AccB7I CCANNNNNTGG 1 cut(s) 575
AccBSI CCGCTC 1 cut(s) 1058
AccI GTMKAC 2 cut(s) 388, 1227
AciI CCGC 5 cut(s) 90, 207, 868, 1053, 1056
AclWI GGATC 3 cut(s) 293, 960, 1194
AcsI RAATTY 4 cut(s) 131, 419, 1131, 1293
AcuI CTGAAG 2 cut(s) 210, 1221
AfaI GTAC 2 cut(s) 394, 642
AfiI CCNNNNNNNGG 6 cut(s) 252, 360, 448, 575, 843, 1070
AflII CTTAAG 1 cut(s) 400
AgsI TTSAA 8 cut(s) 174, 436, 544, 854, 921, 1044, 1141, 1340
AjnI CCWGG 1 cut(s) 1213
AluBI AGCT 8 cut(s) 238, 326, 341, 377, 464, 614, 1127, 1306
AluI AGCT 8 cut(s) 238, 326, 341, 377, 464, 614, 1127, 1306
Alw21I GWGCWC 1 cut(s) 682
Alw26I GTCTC 3 cut(s) 41, 531, 902
AlwI GGATC 3 cut(s) 293, 960, 1194
AlwNI CAGNNNCTG 2 cut(s) 22, 1306
AoxI GGCC 5 cut(s) 77, 229, 315, 450, 1143
ApoI RAATTY 4 cut(s) 131, 419, 1131, 1293
AseI ATTAAT 1 cut(s) 717
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 2 cut(s) 831, 1242
AspS9I GGNCC 2 cut(s) 229, 316
AsuHPI GGTGA 3 cut(s) 683, 1007, 1229
AsuII TTCGAA 2 cut(s) 279, 1258
AvrII CCTAGG 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 1 cut(s) 1009
BanI GGYRCC 1 cut(s) 1006
BbsI GAAGAC 1 cut(s) 519
Bbv12I GWGCWC 1 cut(s) 682
BbvI GCAGC 9 cut(s) 335, 364, 601, 623, 807, 940, 947, 1061, 1293
BccI CCATC 3 cut(s) 147, 668, 1241
BceAI ACGGC 1 cut(s) 300
BcgI CGANNNNNNTGC 2 cut(s) 606, 640
BciT130I CCWGG 1 cut(s) 1215
BciVI GTATCC 1 cut(s) 1165
BcoDI GTCTC 3 cut(s) 41, 531, 902
BfaI CTAG 3 cut(s) 498, 645, 1244
BfmI CTRYAG 5 cut(s) 309, 355, 523, 609, 615
BfrI CTTAAG 1 cut(s) 400
BfuAI ACCTGC 1 cut(s) 656
BfuI GTATCC 1 cut(s) 1165
BglI GCCNNNNNGGC 1 cut(s) 1285
BlnI CCTAGG 1 cut(s) 644
BlpI GCTNAGC 1 cut(s) 1328
Bme1390I CCNGG 1 cut(s) 1215
BmgT120I GGNCC 2 cut(s) 229, 316
BmiI GGNNCC 2 cut(s) 944, 1008
BmrFI CCNGG 1 cut(s) 1215
BmsI GCATC 1 cut(s) 253
BpiI GAAGAC 1 cut(s) 519
BpmI CTGGAG 2 cut(s) 218, 1296
Bpu10I CCTNAGC 1 cut(s) 15
Bpu1102I GCTNAGC 1 cut(s) 1328
Bpu14I TTCGAA 2 cut(s) 279, 1258
BpuEI CTTGAG 1 cut(s) 946
BsaAI YACGTR 1 cut(s) 392
BsaBI GATNNNNATC 1 cut(s) 303
BsaJI CCNNGG 3 cut(s) 80, 574, 644
Bsc4I CCNNNNNNNGG 6 cut(s) 252, 360, 448, 575, 843, 1070
Bse1I ACTGG 2 cut(s) 1289, 1313
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 3 cut(s) 38, 824, 1322
Bse8I GATNNNNATC 1 cut(s) 303
BseBI CCWGG 1 cut(s) 1215
BseDI CCNNGG 3 cut(s) 80, 574, 644
BseGI GGATG 1 cut(s) 1228
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 6 cut(s) 252, 360, 448, 575, 843, 1070
BseMI GCAATG 3 cut(s) 38, 824, 1322
BseMII CTCAG 5 cut(s) 29, 194, 462, 1109, 1152
BseNI ACTGG 2 cut(s) 1289, 1313
BseRI GAGGAG 2 cut(s) 37, 947
BseSI GKGCMC 1 cut(s) 1009
BseXI GCAGC 9 cut(s) 335, 364, 601, 623, 807, 940, 947, 1061, 1293
BseYI CCCAGC 1 cut(s) 701
BsgI GTGCAG 2 cut(s) 8, 881
BshFI GGCC 5 cut(s) 79, 231, 317, 452, 1145
BshNI GGYRCC 1 cut(s) 1006
BsiHKAI GWGCWC 1 cut(s) 682
BslFI GGGAC 2 cut(s) 169, 884
BslI CCNNNNNNNGG 6 cut(s) 252, 360, 448, 575, 843, 1070
BsmAI GTCTC 3 cut(s) 41, 531, 902
BsmFI GGGAC 2 cut(s) 169, 884
BsmI GAATGC 1 cut(s) 602
BsnI GGCC 5 cut(s) 79, 231, 317, 452, 1145
Bsp119I TTCGAA 2 cut(s) 279, 1258
Bsp1286I GDGCHC 2 cut(s) 682, 1009
Bsp143I GATC 5 cut(s) 298, 685, 952, 1186, 1262
Bsp1720I GCTNAGC 1 cut(s) 1328
Bsp19I CCATGG 1 cut(s) 80
BspACI CCGC 5 cut(s) 90, 207, 868, 1053, 1056
BspANI GGCC 5 cut(s) 79, 231, 317, 452, 1145
BspCNI CTCAG 5 cut(s) 28, 193, 463, 1108, 1153
BspLI GGNNCC 2 cut(s) 944, 1008
BspMAI CTGCAG 2 cut(s) 613, 619
BspMI ACCTGC 1 cut(s) 656
BspPI GGATC 3 cut(s) 293, 960, 1194
BspQI GCTCTTC 1 cut(s) 169
BspT104I TTCGAA 2 cut(s) 279, 1258
BspT107I GGYRCC 1 cut(s) 1006
BspTI CTTAAG 1 cut(s) 400
BsrBI CCGCTC 1 cut(s) 1058
BsrDI GCAATG 3 cut(s) 38, 824, 1322
BsrI ACTGG 2 cut(s) 1289, 1313
BssECI CCNNGG 3 cut(s) 80, 574, 644
BssMI GATC 5 cut(s) 298, 685, 952, 1186, 1262
BssT1I CCWWGG 2 cut(s) 80, 644
Bst2UI CCWGG 1 cut(s) 1215
Bst4CI ACNGT 5 cut(s) 527, 640, 736, 877, 913
Bst6I CTCTTC 3 cut(s) 169, 486, 768
BstAFI CTTAAG 1 cut(s) 400
BstAPI GCANNNNNTGC 2 cut(s) 608, 1306
BstBAI YACGTR 1 cut(s) 392
BstBI TTCGAA 2 cut(s) 279, 1258
BstC8I GCNNGC 4 cut(s) 343, 926, 933, 1277
BstDEI CTNAG 6 cut(s) 15, 180, 471, 1095, 1161, 1328
BstDSI CCRYGG 2 cut(s) 80, 574
BstF5I GGATG 1 cut(s) 1228
BstHHI GCGC 2 cut(s) 831, 1242
BstKTI GATC 5 cut(s) 301, 688, 955, 1189, 1265
BstMAI GTCTC 3 cut(s) 41, 531, 902
BstMBI GATC 5 cut(s) 298, 685, 952, 1186, 1262
BstMWI GCNNNNNNNGC 8 cut(s) 11, 17, 323, 608, 826, 1055, 1285, 1306
BstNI CCWGG 1 cut(s) 1215
BstNSI RCATGY 2 cut(s) 928, 1279
BstSCI CCNGG 1 cut(s) 1213
BstSFI CTRYAG 5 cut(s) 309, 355, 523, 609, 615
BstSLI GKGCMC 1 cut(s) 1009
BstSNI TACGTA 1 cut(s) 392
BstV1I GCAGC 9 cut(s) 335, 364, 601, 623, 807, 940, 947, 1061, 1293
BstV2I GAAGAC 1 cut(s) 519
BstX2I RGATCY 2 cut(s) 298, 952
BstYI RGATCY 2 cut(s) 298, 952
Bsu36I CCTNAGG 1 cut(s) 1161
BsuI GTATCC 1 cut(s) 1165
BsuRI GGCC 5 cut(s) 79, 231, 317, 452, 1145
BtgI CCRYGG 2 cut(s) 80, 574
BtsCI GGATG 1 cut(s) 1228
BtsIMutI CAGTG 2 cut(s) 636, 873
BveI ACCTGC 1 cut(s) 656
Cac8I GCNNGC 4 cut(s) 343, 926, 933, 1277
CaiI CAGNNNCTG 2 cut(s) 22, 1306
CfoI GCGC 2 cut(s) 831, 1242
Cfr13I GGNCC 2 cut(s) 229, 316
Csp6I GTAC 2 cut(s) 393, 641
CviAII CATG 3 cut(s) 81, 925, 1276
CviQI GTAC 2 cut(s) 393, 641
DdeI CTNAG 6 cut(s) 15, 180, 471, 1095, 1161, 1328
DpnI GATC 5 cut(s) 300, 687, 954, 1188, 1264
DpnII GATC 5 cut(s) 298, 685, 952, 1186, 1262
Eam1104I CTCTTC 3 cut(s) 169, 486, 768
EarI CTCTTC 3 cut(s) 169, 486, 768
Eco105I TACGTA 1 cut(s) 392
Eco130I CCWWGG 2 cut(s) 80, 644
Eco57I CTGAAG 2 cut(s) 210, 1221
Eco81I CCTNAGG 1 cut(s) 1161
EcoRII CCWGG 1 cut(s) 1213
EcoT14I CCWWGG 2 cut(s) 80, 644
ErhI CCWWGG 2 cut(s) 80, 644
FaeI CATG 3 cut(s) 84, 928, 1279
FalI AAGNNNNNCTT 4 cut(s) 1013, 1045, 1311, 1343
FaqI GGGAC 2 cut(s) 169, 884
FatI CATG 3 cut(s) 80, 924, 1275
FauI CCCGC 2 cut(s) 97, 861
FblI GTMKAC 2 cut(s) 388, 1227
FokI GGATG 1 cut(s) 1235
FspBI CTAG 3 cut(s) 498, 645, 1244
GlaI GCGC 2 cut(s) 830, 1241
GsaI CCCAGC 1 cut(s) 705
GsuI CTGGAG 2 cut(s) 218, 1296
HaeIII GGCC 5 cut(s) 79, 231, 317, 452, 1145
HhaI GCGC 2 cut(s) 831, 1242
Hin1II CATG 3 cut(s) 84, 928, 1279
Hin6I GCGC 2 cut(s) 829, 1240
HinP1I GCGC 2 cut(s) 829, 1240
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 339
HinfI GANTC 5 cut(s) 212, 588, 621, 1137, 1206
HphI GGTGA 3 cut(s) 683, 1007, 1229
Hpy166II GTNNAC 4 cut(s) 124, 223, 389, 1228
Hpy188I TCNGA 3 cut(s) 725, 947, 1201
Hpy188III TCNNGA 4 cut(s) 625, 683, 963, 1084
Hpy8I GTNNAC 4 cut(s) 124, 223, 389, 1228
Hpy99I CGWCG 1 cut(s) 631
HpyAV CCTTC 7 cut(s) 359, 363, 763, 898, 1050, 1074, 1196
HpyCH4III ACNGT 5 cut(s) 527, 640, 736, 877, 913
HpyCH4IV ACGT 2 cut(s) 391, 629
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 17, 323, 608, 826, 1055, 1285, 1306
HpyF3I CTNAG 6 cut(s) 15, 180, 471, 1095, 1161, 1328
HpySE526I ACGT 2 cut(s) 391, 629
Hsp92II CATG 3 cut(s) 84, 928, 1279
HspAI GCGC 2 cut(s) 829, 1240
Kzo9I GATC 5 cut(s) 298, 685, 952, 1186, 1262
LguI GCTCTTC 1 cut(s) 169
LmnI GCTCC 2 cut(s) 685, 1303
Lsp1109I GCAGC 9 cut(s) 335, 364, 601, 623, 807, 940, 947, 1061, 1293
LweI GCATC 1 cut(s) 253
MaeI CTAG 3 cut(s) 498, 645, 1244
MaeII ACGT 2 cut(s) 391, 629
MaeIII GTNAC 2 cut(s) 347, 1207
MalI GATC 5 cut(s) 300, 687, 954, 1188, 1264
MbiI CCGCTC 1 cut(s) 1058
MboI GATC 5 cut(s) 298, 685, 952, 1186, 1262
MflI RGATCY 2 cut(s) 298, 952
MhlI GDGCHC 2 cut(s) 682, 1009
MluCI AATT 8 cut(s) 131, 292, 419, 429, 482, 1118, 1131, 1293
MlyI GAGTC 2 cut(s) 221, 1215
MmeI TCCRAC 2 cut(s) 703, 1157
MseI TTAA 5 cut(s) 258, 291, 401, 717, 1121
MspA1I CMGCKG 1 cut(s) 614
MspCI CTTAAG 1 cut(s) 400
MspR9I CCNGG 1 cut(s) 1215
Mva1269I GAATGC 1 cut(s) 602
MvaI CCWGG 1 cut(s) 1215
MwoI GCNNNNNNNGC 8 cut(s) 11, 17, 323, 608, 826, 1055, 1285, 1306
NcoI CCATGG 1 cut(s) 80
NdeII GATC 5 cut(s) 298, 685, 952, 1186, 1262
NlaIII CATG 3 cut(s) 84, 928, 1279
NlaIV GGNNCC 2 cut(s) 944, 1008
NmeAIII GCCGAG 2 cut(s) 235, 1171
NmuCI GTSAC 2 cut(s) 347, 1207
NspI RCATGY 2 cut(s) 928, 1279
NspV TTCGAA 2 cut(s) 279, 1258
PaeI GCATGC 2 cut(s) 928, 1279
PaqCI CACCTGC 1 cut(s) 656
PciSI GCTCTTC 1 cut(s) 169
PctI GAATGC 1 cut(s) 602
PfeI GAWTC 3 cut(s) 588, 621, 1137
PflMI CCANNNNNTGG 1 cut(s) 575
PleI GAGTC 2 cut(s) 220, 1214
PpsI GAGTC 2 cut(s) 220, 1214
Ppu21I YACGTR 1 cut(s) 392
PshBI ATTAAT 1 cut(s) 717
Psp6I CCWGG 1 cut(s) 1213
PspFI CCCAGC 1 cut(s) 701
PspGI CCWGG 1 cut(s) 1213
PspN4I GGNNCC 2 cut(s) 944, 1008
PspPI GGNCC 2 cut(s) 229, 316
PstI CTGCAG 2 cut(s) 613, 619
PstNI CAGNNNCTG 2 cut(s) 22, 1306
PsuI RGATCY 2 cut(s) 298, 952
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 2 cut(s) 394, 642
RsaNI GTAC 2 cut(s) 393, 641
SapI GCTCTTC 1 cut(s) 169
SaqAI TTAA 5 cut(s) 258, 291, 401, 717, 1121
Sau3AI GATC 5 cut(s) 298, 685, 952, 1186, 1262
Sau96I GGNCC 2 cut(s) 229, 316
SchI GAGTC 2 cut(s) 221, 1215
ScrFI CCNGG 1 cut(s) 1215
SduI GDGCHC 2 cut(s) 682, 1009
SfaNI GCATC 1 cut(s) 253
SfcI CTRYAG 5 cut(s) 309, 355, 523, 609, 615
SfuI TTCGAA 2 cut(s) 279, 1258
SmlI CTYRAG 2 cut(s) 400, 961
SmoI CTYRAG 2 cut(s) 400, 961
SnaBI TACGTA 1 cut(s) 392
SphI GCATGC 2 cut(s) 928, 1279
Sse9I AATT 8 cut(s) 131, 292, 419, 429, 482, 1118, 1131, 1293
SsiI CCGC 5 cut(s) 90, 207, 868, 1053, 1056
SspMI CTAG 3 cut(s) 498, 645, 1244
StyD4I CCNGG 1 cut(s) 1213
StyI CCWWGG 2 cut(s) 80, 644
TaaI ACNGT 5 cut(s) 527, 640, 736, 877, 913
TaiI ACGT 2 cut(s) 394, 632
TaqI TCGA 6 cut(s) 279, 460, 626, 1083, 1135, 1258
TasI AATT 8 cut(s) 131, 292, 419, 429, 482, 1118, 1131, 1293
TauI GCSGC 2 cut(s) 1055, 1058
TfiI GAWTC 3 cut(s) 588, 621, 1137
Tru1I TTAA 5 cut(s) 258, 291, 401, 717, 1121
Tru9I TTAA 5 cut(s) 258, 291, 401, 717, 1121
TscAI CASTG 2 cut(s) 643, 880
TseFI GTSAC 2 cut(s) 347, 1207
Tsp45I GTSAC 2 cut(s) 347, 1207
TspDTI ATGAA 1 cut(s) 819
TspGWI ACGGA 3 cut(s) 563, 644, 965
TspRI CASTG 2 cut(s) 643, 880
Van91I CCANNNNNTGG 1 cut(s) 575
Vha464I CTTAAG 1 cut(s) 400
VspI ATTAAT 1 cut(s) 717
XapI RAATTY 4 cut(s) 131, 419, 1131, 1293
XceI RCATGY 2 cut(s) 928, 1279
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 388, 1227
XspI CTAG 3 cut(s) 498, 645, 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.