Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001824

Physical Location & Seq

Genomic Coordinates Reverse (-)

3459050 .. 3463336

Gene Structure 4287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0047800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGCTACATCTTCACGTCTGTTAGCTTCTTGTTCCAGCCAGAGATGTAGAAAGAGAAAATTTCCAGAGGAATTTCCAAGCTTCTGCGTAAAGATTGTCACTAATGATGACCTCAGAGATGGGAAGGAACTTCCAGAGACAGCTGTGAGGAAGTATGGAAATTGTATGGCTGATCATATATTCCTTGAAGTGCCTAACTGTGGAAAGCCATGGGAAGTCGAACTCAGAACATCAGCTCTTGGTGGACGAATGTGGTTACTAAAGGGATGGGAAGAGTTTTCTAACTTTTACTCACTAGACCAAGGCTGCTTTCCAGTGTTCAGCTATGAAGGAAAACAGTCCCATTTCCAAGTACGCATTTTTCATTGGAAACGCATGGAAATGGATTACCCTATTCGTAGACGAGGTACATTCTCACGTGCAATGGCTTCTTCCGGCAAGAGAGATGGAAAAGGACCTGCCTTTCCGGAGGACTATCCAAGCTTCTTCTTAAACATTGTTACTGATGACGATCTCCTAAACGGGAAGGAACTTCCAGAGCCAGCTGTGAGAAAGTACAGAAATTGCATGGCAGATCATATATTCCTCGAGGTTCCAAACTGCGAAAAACCATGGAAATTGGAATTGAGAAGATCAGCTCGTGGTGGCCGAATGTGGTTAAACAAGGGATGGCAAGAGTTTGCCAACTTTTACTCACTAGATGAAGGCTGCTTAGCAGTGTTCAGCTATGAAGGCGAACATTCTCATTTCCAAGTACGTGTTTTTCAGTGGAATGATATGGAATTAGATTACCCTATTCATGGAGGAGGAGTTGATGACAGACCAAAAAGGAAAAAAACAGGAGCTAATCAAGACATGCCTCCTGCCCATTTAGAAACTAGAGCCGCTTCAATTTCCTCCGGATCCTCAGCTGATGAACACCAAAACGATCTTACTGCAGCTGCCAGTTTCAAATCTAACAAGCCATTTTTTATGCTTAACATCTGTGCTTCATACATACAACTCGGTTTCGCGCACATAAATCGATCTTTTGCCAAGGAACATCTCTGTAGACCAGGCACTTCTTGCGATGTGACCCTGCAGATTTCAGGTGAGAGAGTTTGGACTGCTGTGTGCACTGCCACCGAACATAGAGATCAGAAAATATATACTAGAATTTCAGGTGCTGGATGGAAAGCATTTCATCAGGACAATCATCTGGTAAAAGGTAATATCTGTGTGTTCGAGTTGATAGAGGAGCGTACATTCAAAGTTTCCATATTCCGAACTAAAGTGAAGATTAATAGGCAAACTGAGGAAAAGGATATGGAAATAGATTACCCTATTCAAGGAGGAGGAATTGATGTAACACCAAAAGGGAAAAAGCCAGGAGCTAATCAAGATGTGCCTCCTGCCCACTTAGAAGCTGGAGCCAACTCAGTTTCTTCTGGATCGTCAGCTGATGAAGACCAAAATAATCTTCTCACAACTACTAGTTTCAAATCTGACAAGCCAATTTTTATGCTCAATATGACAGCTACAGACATGCGCCTCTCTCTTGCGTATATAAGTGCATCATTTGCCGCTGAACATCTATGCAAACCAGGCATTTCTTGCAATGTGACCCTACAGAATTCAGAGGAGAGAGTTTGGACTGCTCAGTGTTTTGTCAGTGAACACAGCGATCACCGAGTGCAAGCATGTCTTTCAGGGCCTGGTTGGAAAGCATTTAAGCAGGACAATCATCTGGTATTAGGTGATGTCTGTGTTTTTGAGTTGATAGATGAACGTAAACTAAAAGTTTCCATATTCCAAGGTAAAGTGAAGATTATTAGGCAAAATGAGGAAAATGAAGCCAGGCACATTTCTCAGTTTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM

Protein Analysis

619

Amino Acids

70.29

Weight (kDa)

7.54

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	28 - 121	1.1e-07	B3 DNA binding domain
B3	PF02362	171 - 255	2.1e-08	B3 DNA binding domain
B3	PF02362	330 - 423	2.8e-11	B3 DNA binding domain
B3	PF02362	503 - 598	8.9e-13	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39900 AT3G55770 AT3G55770 AT3G55770 AT3G55770 AT3G55770 AT3G55770 AT3G55770
fragaria_vesca	FvH4_5g01960 FvH4_5g01960 FvH4_7g23860 FvH4_7g23860
malus_domestica	MD01G1145700.v1.1 MD06G1078000.v1.1 MD07G1212800.v1.1 MD14G1098800.v1.1
prunus_persica	Prupe.2G245000_v2.0.a1 Prupe.2G245000_v2.0.a1 Prupe.2G245000_v2.0.a1 Prupe.2G245000_v2.0.a1 Prupe.2G245000_v2.0.a1 Prupe.5G095800_v2.0.a1 Prupe.5G095800_v2.0.a1
pyrus_communis	pycom01g16520 pycom07g19560 pycom14g09680
rosa_chinensis	RchiOBHm_Chr1g0369211 RchiOBHm_Chr7g0198411
rosa_laevigata	RLG00000003869 RLG00000027145
rosa_multiflora	Rmu_sc0001250.1_g000011 Rmu_sc0005807.1_g000002 Rmu_sc0030914.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257710 Rroxscaffold_4G00287850
rosa_rugosa	Rorug01G0349100 Rorug07G0047800
rosa_samantha	Rh1AG356000 Rh1BG319600 Rh1CG333600 Rh1DG350300 Rh7AG171600 Rh7BG174400 Rh7CG180000 Rh7DG173500
rosa_wichuraiana	Rw1G031420 Rw7G014980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	587
Acc36I	ACCTGC	1 cut(s)	466
AccI	GTMKAC	2 cut(s)	400, 1051
AccII	CGCG	1 cut(s)	1013
AccIII	TCCGGA	2 cut(s)	466, 899
AciI	CCGC	2 cut(s)	885, 1563
AclWI	GGATC	3 cut(s)	897, 910, 1438
AcoI	YGGCCR	1 cut(s)	646
AcsI	RAATTY	4 cut(s)	59, 71, 1155, 1612
AcvI	CACGTG	1 cut(s)	419
AdeI	CACNNNGTG	1 cut(s)	1672
AfaI	GTAC	5 cut(s)	354, 409, 557, 756, 1243
AfiI	CCNNNNNNNGG	3 cut(s)	200, 800, 1328
AflIII	ACRYGT	1 cut(s)	757
AgsI	TTSAA	6 cut(s)	188, 891, 952, 1249, 1328, 1480
AhlI	ACTAGT	1 cut(s)	1472
AjiI	CACGTC	1 cut(s)	17
AjnI	CCWGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
AjuI	GAANNNNNNNTTGG	4 cut(s)	294, 326, 1443, 1475
Alw21I	GWGCWC	1 cut(s)	1118
Alw26I	GTCTC	1 cut(s)	131
Alw44I	GTGCAC	1 cut(s)	1114
AlwI	GGATC	3 cut(s)	897, 910, 1438
AlwNI	CAGNNNCTG	2 cut(s)	1166, 1694
Ama87I	CYCGRG	1 cut(s)	587
Aor13HI	TCCGGA	2 cut(s)	466, 899
AoxI	GGCC	2 cut(s)	646, 1691
ApaLI	GTGCAC	1 cut(s)	1114
ApeKI	GCWGC	4 cut(s)	306, 708, 938, 941
ApoI	RAATTY	4 cut(s)	59, 71, 1155, 1612
AseI	ATTAAT	1 cut(s)	1281
AspLEI	GCGC	2 cut(s)	1015, 1530
AspS9I	GGNCC	2 cut(s)	455, 1691
AsuHPI	GGTGA	3 cut(s)	1103, 1658, 1748
AvaI	CYCGRG	1 cut(s)	587
AvaII	GGWCC	1 cut(s)	455
BaeGI	GKGCMC	1 cut(s)	1118
BamHI	GGATCC	1 cut(s)	902
BauI	CACGAG	1 cut(s)	639
BbrPI	CACGTG	1 cut(s)	419
BbsI	GAAGAC	1 cut(s)	1452
Bbv12I	GWGCWC	1 cut(s)	1118
BbvCI	CCTCAGC	1 cut(s)	907
BbvI	GCAGC	4 cut(s)	293, 695, 928, 950
BccI	CCATC	5 cut(s)	113, 261, 440, 663, 1164
BcgI	CGANNNNNNTGC	4 cut(s)	917, 951, 1004, 1038
BciT130I	CCWGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
BclI	TGATCA	1 cut(s)	172
BcoDI	GTCTC	1 cut(s)	131
BcuI	ACTAGT	1 cut(s)	1472
BfaI	CTAG	5 cut(s)	296, 698, 879, 1152, 1473
BfmI	CTRYAG	5 cut(s)	936, 1048, 1079, 1518, 1607
BfuAI	ACCTGC	1 cut(s)	466
BisI	GCNGC	6 cut(s)	307, 709, 885, 939, 942, 1563
BlpI	GCTNAGC	1 cut(s)	712
BlsI	GCNGC	6 cut(s)	308, 710, 886, 940, 943, 1564
Bme1390I	CCNGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
Bme18I	GGWCC	1 cut(s)	455
BmeT110I	CYCGRG	1 cut(s)	587
BmgBI	CACGTC	1 cut(s)	17
BmgT120I	GGNCC	2 cut(s)	455, 1691
BmiI	GGNNCC	3 cut(s)	594, 904, 1411
BmrFI	CCNGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
BmsI	GCATC	1 cut(s)	1562
BpiI	GAAGAC	1 cut(s)	1452
BpmI	CTGGAG	1 cut(s)	1428
Bpu10I	CCTNAGC	1 cut(s)	907
Bpu1102I	GCTNAGC	1 cut(s)	712
Bsa29I	ATCGAT	1 cut(s)	1024
BsaAI	YACGTR	2 cut(s)	419, 758
BsaBI	GATNNNNATC	1 cut(s)	510
BsaJI	CCNNGG	5 cut(s)	209, 301, 611, 1035, 1792
BsaWI	WCCGGW	2 cut(s)	466, 899
BsaXI	ACNNNNNCTCC	2 cut(s)	795, 825
Bsc4I	CCNNNNNNNGG	3 cut(s)	200, 800, 1328
Bse1I	ACTGG	2 cut(s)	314, 945
Bse3DI	GCAATG	2 cut(s)	429, 1603
Bse8I	GATNNNNATC	1 cut(s)	510
BseAI	TCCGGA	2 cut(s)	466, 899
BseBI	CCWGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
BseCI	ATCGAT	1 cut(s)	1024
BseDI	CCNNGG	5 cut(s)	209, 301, 611, 1035, 1792
BseGI	GGATG	3 cut(s)	272, 674, 1175
BseJI	GATNNNNATC	1 cut(s)	510
BseLI	CCNNNNNNNGG	3 cut(s)	200, 800, 1328
BseMI	GCAATG	2 cut(s)	429, 1603
BseMII	CTCAG	6 cut(s)	127, 238, 921, 1284, 1431, 1652
BseNI	ACTGG	2 cut(s)	314, 945
BseRI	GAGGAG	5 cut(s)	819, 822, 1250, 1347, 1634
BseSI	GKGCMC	1 cut(s)	1118
BseXI	GCAGC	4 cut(s)	293, 695, 928, 950
Bsh1236I	CGCG	1 cut(s)	1013
BshFI	GGCC	2 cut(s)	648, 1693
BshVI	ATCGAT	1 cut(s)	1024
BsiHKAI	GWGCWC	1 cut(s)	1118
BsiHKCI	CYCGRG	1 cut(s)	587
BsiSI	CCGG	3 cut(s)	435, 467, 900
BslFI	GGGAC	1 cut(s)	325
BslI	CCNNNNNNNGG	3 cut(s)	200, 800, 1328
BsmAI	GTCTC	1 cut(s)	131
BsmFI	GGGAC	1 cut(s)	325
BsnI	GGCC	2 cut(s)	648, 1693
BsoBI	CYCGRG	1 cut(s)	587
Bsp1286I	GDGCHC	1 cut(s)	1118
Bsp13I	TCCGGA	2 cut(s)	466, 899
Bsp1720I	GCTNAGC	1 cut(s)	712
Bsp19I	CCATGG	2 cut(s)	209, 611
BspACI	CCGC	2 cut(s)	885, 1563
BspANI	GGCC	2 cut(s)	648, 1693
BspCNI	CTCAG	6 cut(s)	126, 237, 920, 1285, 1430, 1651
BspDI	ATCGAT	1 cut(s)	1024
BspEI	TCCGGA	2 cut(s)	466, 899
BspFNI	CGCG	1 cut(s)	1013
BspLI	GGNNCC	3 cut(s)	594, 904, 1411
BspMAI	CTGCAG	2 cut(s)	940, 1083
BspMI	ACCTGC	1 cut(s)	466
BspPI	GGATC	3 cut(s)	897, 910, 1438
BsrDI	GCAATG	2 cut(s)	429, 1603
BsrI	ACTGG	2 cut(s)	314, 945
BssECI	CCNNGG	5 cut(s)	209, 301, 611, 1035, 1792
BssSI	CACGAG	1 cut(s)	639
BssT1I	CCWWGG	5 cut(s)	209, 301, 611, 1035, 1792
Bst2BI	CACGAG	1 cut(s)	639
Bst2UI	CCWGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
Bst4CI	ACNGT	2 cut(s)	200, 339
Bst6I	CTCTTC	1 cut(s)	267
BstAPI	GCANNNNNTGC	3 cut(s)	1065, 1559, 1593
BstBAI	YACGTR	2 cut(s)	419, 758
BstC8I	GCNNGC	2 cut(s)	543, 1677
BstDEI	CTNAG	9 cut(s)	113, 224, 712, 907, 1293, 1399, 1417, 1638, 1848
BstDSI	CCRYGG	2 cut(s)	209, 611
BstENI	CCTNNNNNAGG	1 cut(s)	1326
BstF5I	GGATG	3 cut(s)	272, 674, 1175
BstFNI	CGCG	1 cut(s)	1013
BstHHI	GCGC	2 cut(s)	1015, 1530
BstMAI	GTCTC	1 cut(s)	131
BstMWI	GCNNNNNNNGC	5 cut(s)	732, 1065, 1559, 1584, 1593
BstNI	CCWGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
BstNSI	RCATGY	3 cut(s)	859, 1528, 1683
BstSCI	CCNGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
BstSFI	CTRYAG	5 cut(s)	936, 1048, 1079, 1518, 1607
BstSLI	GKGCMC	1 cut(s)	1118
BstUI	CGCG	1 cut(s)	1013
BstV1I	GCAGC	4 cut(s)	293, 695, 928, 950
BstV2I	GAAGAC	1 cut(s)	1452
BstX2I	RGATCY	1 cut(s)	902
BstYI	RGATCY	1 cut(s)	902
Bsu15I	ATCGAT	1 cut(s)	1024
BsuRI	GGCC	2 cut(s)	648, 1693
BsuTUI	ATCGAT	1 cut(s)	1024
BtgI	CCRYGG	2 cut(s)	209, 611
BtgZI	GCGATG	1 cut(s)	1083
BtrI	CACGTC	1 cut(s)	17
BtsCI	GGATG	3 cut(s)	272, 674, 1175
BtsI	GCAGTG	2 cut(s)	723, 1116
BtsIMutI	CAGTG	6 cut(s)	321, 723, 773, 1116, 1646, 1657
BveI	ACCTGC	1 cut(s)	466
Cac8I	GCNNGC	2 cut(s)	543, 1677
CaiI	CAGNNNCTG	2 cut(s)	1166, 1694
CfoI	GCGC	2 cut(s)	1015, 1530
Cfr13I	GGNCC	2 cut(s)	455, 1691
ClaI	ATCGAT	1 cut(s)	1024
Csp6I	GTAC	5 cut(s)	353, 408, 556, 755, 1242
CviAII	CATG	8 cut(s)	210, 376, 568, 612, 800, 856, 1525, 1680
CviQI	GTAC	5 cut(s)	353, 408, 556, 755, 1242
DdeI	CTNAG	9 cut(s)	113, 224, 712, 907, 1293, 1399, 1417, 1638, 1848
DraIII	CACNNNGTG	1 cut(s)	1672
EaeI	YGGCCR	1 cut(s)	646
Eam1104I	CTCTTC	1 cut(s)	267
EarI	CTCTTC	1 cut(s)	267
Eco130I	CCWWGG	5 cut(s)	209, 301, 611, 1035, 1792
Eco47I	GGWCC	1 cut(s)	455
Eco72I	CACGTG	1 cut(s)	419
Eco88I	CYCGRG	1 cut(s)	587
EcoNI	CCTNNNNNAGG	1 cut(s)	1326
EcoO109I	RGGNCCY	2 cut(s)	455, 1691
EcoRI	GAATTC	1 cut(s)	1612
EcoRII	CCWGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
EcoT14I	CCWWGG	5 cut(s)	209, 301, 611, 1035, 1792
ErhI	CCWWGG	5 cut(s)	209, 301, 611, 1035, 1792
FaeI	CATG	8 cut(s)	213, 379, 571, 615, 803, 859, 1528, 1683
FalI	AAGNNNNNCTT	2 cut(s)	1668, 1700
FaqI	GGGAC	1 cut(s)	325
FatI	CATG	8 cut(s)	209, 375, 567, 611, 799, 855, 1524, 1679
FbaI	TGATCA	1 cut(s)	172
FblI	GTMKAC	2 cut(s)	400, 1051
Fnu4HI	GCNGC	6 cut(s)	307, 709, 885, 939, 942, 1563
FokI	GGATG	3 cut(s)	279, 681, 1182
Fsp4HI	GCNGC	6 cut(s)	307, 709, 885, 939, 942, 1563
FspBI	CTAG	5 cut(s)	296, 698, 879, 1152, 1473
GlaI	GCGC	2 cut(s)	1014, 1529
GluI	GCNGC	6 cut(s)	307, 709, 885, 939, 942, 1563
GsuI	CTGGAG	1 cut(s)	1428
HaeIII	GGCC	2 cut(s)	648, 1693
HapII	CCGG	3 cut(s)	435, 467, 900
HhaI	GCGC	2 cut(s)	1015, 1530
Hin1II	CATG	8 cut(s)	213, 379, 571, 615, 803, 859, 1528, 1683
Hin6I	GCGC	2 cut(s)	1013, 1528
HinP1I	GCGC	2 cut(s)	1013, 1528
HindIII	AAGCTT	2 cut(s)	79, 481
HpaII	CCGG	3 cut(s)	435, 467, 900
HphI	GGTGA	3 cut(s)	1103, 1658, 1748
Hpy166II	GTNNAC	6 cut(s)	245, 401, 1052, 1116, 1655, 1772
Hpy188I	TCNGA	6 cut(s)	116, 227, 1140, 1265, 1486, 1618
Hpy188III	TCNNGA	9 cut(s)	65, 134, 467, 536, 851, 900, 1187, 1379, 1428
Hpy8I	GTNNAC	6 cut(s)	245, 401, 1052, 1116, 1655, 1772
HpyAV	CCTTC	5 cut(s)	118, 323, 520, 698, 725
HpyCH4III	ACNGT	2 cut(s)	200, 339
HpyCH4IV	ACGT	4 cut(s)	16, 418, 757, 1768
HpyCH4V	TGCA	9 cut(s)	422, 567, 938, 1081, 1116, 1553, 1578, 1596, 1675
HpyF10VI	GCNNNNNNNGC	5 cut(s)	732, 1065, 1559, 1584, 1593
HpyF3I	CTNAG	9 cut(s)	113, 224, 712, 907, 1293, 1399, 1417, 1638, 1848
HpySE526I	ACGT	4 cut(s)	16, 418, 757, 1768
Hsp92II	CATG	8 cut(s)	213, 379, 571, 615, 803, 859, 1528, 1683
HspAI	GCGC	2 cut(s)	1013, 1528
Kpn2I	TCCGGA	2 cut(s)	466, 899
Ksp22I	TGATCA	1 cut(s)	172
LmnI	GCTCC	4 cut(s)	842, 1237, 1370, 1409
Lsp1109I	GCAGC	4 cut(s)	293, 695, 928, 950
LweI	GCATC	1 cut(s)	1562
MaeI	CTAG	5 cut(s)	296, 698, 879, 1152, 1473
MaeII	ACGT	4 cut(s)	16, 418, 757, 1768
MaeIII	GTNAC	6 cut(s)	97, 255, 499, 1072, 1345, 1600
MflI	RGATCY	1 cut(s)	902
MhlI	GDGCHC	1 cut(s)	1118
MmeI	TCCRAC	1 cut(s)	1679
MroI	TCCGGA	2 cut(s)	466, 899
MseI	TTAA	6 cut(s)	491, 659, 978, 1281, 1710, 1854
MslI	CAYNNNNRTG	1 cut(s)	380
MspA1I	CMGCKG	6 cut(s)	143, 545, 911, 941, 1439, 1565
MspI	CCGG	3 cut(s)	435, 467, 900
MspR9I	CCNGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
MvaI	CCWGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
MvnI	CGCG	1 cut(s)	1013
MwoI	GCNNNNNNNGC	5 cut(s)	732, 1065, 1559, 1584, 1593
NcoI	CCATGG	2 cut(s)	209, 611
NlaIII	CATG	8 cut(s)	213, 379, 571, 615, 803, 859, 1528, 1683
NlaIV	GGNNCC	3 cut(s)	594, 904, 1411
NmuCI	GTSAC	3 cut(s)	97, 1072, 1600
NspI	RCATGY	3 cut(s)	859, 1528, 1683
PaeR7I	CTCGAG	1 cut(s)	587
PcsI	WCGNNNNNNNCGW	1 cut(s)	646
PkrI	GCNGC	6 cut(s)	308, 710, 886, 940, 943, 1564
PmaCI	CACGTG	1 cut(s)	419
PmlI	CACGTG	1 cut(s)	419
Ppu21I	YACGTR	2 cut(s)	419, 758
PpuMI	RGGWCCY	1 cut(s)	455
PshBI	ATTAAT	1 cut(s)	1281
Psp5II	RGGWCCY	1 cut(s)	455
Psp6I	CCWGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
PspCI	CACGTG	1 cut(s)	419
PspGI	CCWGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
PspN4I	GGNNCC	3 cut(s)	594, 904, 1411
PspPI	GGNCC	2 cut(s)	455, 1691
PspPPI	RGGWCCY	1 cut(s)	455
PspXI	VCTCGAGB	1 cut(s)	587
PstI	CTGCAG	2 cut(s)	940, 1083
PstNI	CAGNNNCTG	2 cut(s)	1166, 1694
PsuI	RGATCY	1 cut(s)	902
PvuII	CAGCTG	5 cut(s)	143, 545, 911, 941, 1439
RsaI	GTAC	5 cut(s)	354, 409, 557, 756, 1243
RsaNI	GTAC	5 cut(s)	353, 408, 556, 755, 1242
RseI	CAYNNNNRTG	1 cut(s)	380
SaqAI	TTAA	6 cut(s)	491, 659, 978, 1281, 1710, 1854
SatI	GCNGC	6 cut(s)	307, 709, 885, 939, 942, 1563
Sau96I	GGNCC	2 cut(s)	455, 1691
ScrFI	CCNGG	5 cut(s)	1056, 1368, 1584, 1695, 1837
SduI	GDGCHC	1 cut(s)	1118
SfaNI	GCATC	1 cut(s)	1562
SfcI	CTRYAG	5 cut(s)	936, 1048, 1079, 1518, 1607
Sfr274I	CTCGAG	1 cut(s)	587
SinI	GGWCC	1 cut(s)	455
SlaI	CTCGAG	1 cut(s)	587
SmiMI	CAYNNNNRTG	1 cut(s)	380
SmlI	CTYRAG	1 cut(s)	587
SmoI	CTYRAG	1 cut(s)	587
SpeI	ACTAGT	1 cut(s)	1472
SsiI	CCGC	2 cut(s)	885, 1563
SspMI	CTAG	5 cut(s)	296, 698, 879, 1152, 1473
StyD4I	CCNGG	5 cut(s)	1054, 1366, 1582, 1693, 1835
StyI	CCWWGG	5 cut(s)	209, 301, 611, 1035, 1792
TaaI	ACNGT	2 cut(s)	200, 339
TaiI	ACGT	4 cut(s)	19, 421, 760, 1771
TaqI	TCGA	4 cut(s)	219, 588, 1024, 1224
TatI	WGTACW	1 cut(s)	555
TauI	GCSGC	2 cut(s)	887, 1565
Tru1I	TTAA	6 cut(s)	491, 659, 978, 1281, 1710, 1854
Tru9I	TTAA	6 cut(s)	491, 659, 978, 1281, 1710, 1854
TscAI	CASTG	6 cut(s)	321, 723, 773, 1123, 1646, 1657
TseFI	GTSAC	3 cut(s)	97, 1072, 1600
TseI	GCWGC	4 cut(s)	306, 708, 938, 941
Tsp45I	GTSAC	3 cut(s)	97, 1072, 1600
TspRI	CASTG	6 cut(s)	321, 723, 773, 1123, 1646, 1657
VneI	GTGCAC	1 cut(s)	1114
VpaK11BI	GGWCC	1 cut(s)	455
VspI	ATTAAT	1 cut(s)	1281
XagI	CCTNNNNNAGG	1 cut(s)	1326
XapI	RAATTY	4 cut(s)	59, 71, 1155, 1612
XceI	RCATGY	3 cut(s)	859, 1528, 1683
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1403
XhoI	CTCGAG	1 cut(s)	587
XmiI	GTMKAC	2 cut(s)	400, 1051
XspI	CTAG	5 cut(s)	296, 698, 879, 1152, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.