Rorug07G0072400

Acid phosphatase homologues

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0005864
Physical Location & Seq
Reverse (-)
5550726 .. 5555037
4312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0072400.1

Sequence Viewer

Length: 1806 bp
ATGCCGGGATTAGTCTCCGTCAAAACCCCGCCGGGCTCGGCGCGGCTCCAAATCTCGGTCCCGGAGGCCCAGGCCCAACCGCAAAGATCCGACCTCGCCGCAATTTCCAAAACGCCGTCGCCGCTCGCCAAGAAGCCTCCCTCGCCTTCCGCCTCCCGATCCCGGCCCTCGCCGAACCGCTTCAAGTCCAAATCGCCTCAGCCGGAGAGTCCGAACCCGATTCTCGCCGACGCCTCGCTCGACAACCCGGATCTCGGCCCGTTCCTGCTGAAGCTGGCCCGGGACACCATCGCCTCCGGCGAGGGCCCGAACAAGGCGCTGGACTACGCGGTCCGGGCGGCCAAGTCGTTCGAGCGGTGCTCCGTCGACGGCGAACCCAGCCTGGACCTGGTGATGAGTCTGCACGTGCTGGCGGCTATTTACTGCAGCTTGGGCCGGTTCGAGGAGGCGGTTCCGGTTCTGGACCGGGCGATTCGGGTCCCCGAAGTCGGAAGAGGTGCGGATCACGCGCTGGCGGCGTTCTCTGGGCATATGCAGCTGGGGGACACGTACTCGATGCTGGGCCAAGTGGACCGGTCCATTGAATGCTACGAGGAGGGCTTGAAGATCCAGATCGAGGCCTTGGGTGACACTGATCCCAGAGTCGGTGAGACTTGCAGATATTTAGCTGAGGCTCATGTCCAAGCAATGCAGTTTGAAAGAGCTGAAGAATTGTGCAAGAAGACTCTTGAAATCCACCGTGCTCATAGTGAACCAGCATCTCTTGAGGAGGCAGCTGATCGCAGACTGATGGCTCTTATATGCGAGGCAAAGGGAGATTATGAAGCAGCACTTGAACACCTTGTCCTTGCTAGCATGGCAATGATTGCAAATGGACAAGAAAATGAGGTTGCTGCTATTGATGTCAGCATAGGCAACATTTACATGTCTCTTTGTCGCTTTGATGAGGCTGTCTTCTCCTATCAGAAGGCACTCACTGTTCTAAAGTCATCAAGGGGAGATAACCACCCTTCAGTTGCCTCCATCTTTGTACGCCTTGCTGACCTATATCATAAGACTGGAAAGCTCCGAGAGTCCAAATCGTATTGTGAGAATGCCTTGAGGATATATGTGAAACCTGTGCCTGGAACAACAGCAGAAGAGATTTCTGGTGGATTGACTGAAATTTCAGCTATTTATGAGTCCATGGATGAGCCGGAGGAGGCACTTAAGTTATTACAAAAGGCAATGAGTTTGTTAGAGGATAAACCTGGACAGCAAAGCACAATTGCTGGAATAGAAGCACGGATGGGAGTGATGTATTGCATGCTTGGGAGATATGAAGAAGCAAGGAGCTCTTTTGGAAGTGCTATAGCAAAACTTAGAGCTAGTGGAGAGAAGAAGTCTCCCTTCTTTGGGGTTGTGTTGAACCAGATGGGATTGGCTTGTGTTCAATTGTTCAAGATAGATGAGGCCGGTGAGTTGTTTGAAGAAGCGAGGAGAATATTAGAACAAGAGTGTGGTCCTTGTCATCAAGATACTCTTGGAGTGTATAGCAATCTTGCAGCAACCTATGATGCTATGGGGAGAGTTGAAGATGCAATTGAAATTTTGGAGTATGTGCTTAAATTGCGAGAAGAAAAGCTTGGAATTGCAAATCCTGATTTTGAAGATGAGAAGAGAAGACTATCCGAGCTCCTGAAAGAAGCAGGCAGGAAGCGAGACAAAAAAGCAAAATCATTGGAAAACCTCATTGATCCAAACTCGAAGAAGACTACGAAGAAAGAGGGGACAAGGAGGTGGGCTAGCCTGGGTTTCAGACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAP2

Protein Analysis

601

Amino Acids

65.93

Weight (kDa)

5.65

Isoelectric Point (pI)

50.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_12 PF13424 133 - 204 4.3e-08 Tetratricopeptide repeat
TPR_MalT PF17874 135 - 287 6.2e-10 MalT-like TPR region
TPR_12 PF13424 222 - 281 9.6e-06 Tetratricopeptide repeat
TPR_MalT PF17874 264 - 417 6.4e-09 MalT-like TPR region
TPR_NPHP3 PF24885 291 - 422 2.4e-09 Nephrocystin-3 TPR domain
TPR_12 PF13424 297 - 370 9.6e-11 Tetratricopeptide repeat
TPR_12 PF13424 339 - 414 1.7e-08 Tetratricopeptide repeat
TPR_12 PF13424 426 - 498 5.8e-08 Tetratricopeptide repeat
TPR_12 PF13424 468 - 540 9e-11 Tetratricopeptide repeat
TPR_10 PF13374 507 - 548 2.5e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 329
AccBSI CCGCTC 2 cut(s) 124, 355
AccI GTMKAC 1 cut(s) 366
AccII CGCG 3 cut(s) 43, 329, 509
AclWI GGATC 7 cut(s) 81, 153, 258, 510, 601, 629, 1730
AcoI YGGCCR 1 cut(s) 339
AcsI RAATTY 2 cut(s) 1164, 1587
AcuI CTGAAG 3 cut(s) 290, 726, 996
AcvI CACGTG 1 cut(s) 406
AcyI GRCGYC 1 cut(s) 231
AfaI GTAC 2 cut(s) 551, 1032
AflII CTTAAG 1 cut(s) 1208
AflIII ACRYGT 2 cut(s) 546, 924
AgeI ACCGGT 1 cut(s) 573
AjnI CCWGG 6 cut(s) 69, 381, 387, 1123, 1249, 1788
AjuI GAANNNNNNNTTGG 2 cut(s) 1608, 1640
AloI GAACNNNNNNTCC 2 cut(s) 828, 860
Alw21I GWGCWC 4 cut(s) 362, 745, 1337, 1677
Alw26I GTCTC 5 cut(s) 19, 644, 933, 1389, 1695
AlwI GGATC 7 cut(s) 81, 153, 258, 510, 601, 629, 1730
Ama87I CYCGRG 1 cut(s) 279
ApaI GGGCCC 1 cut(s) 308
ApeKI GCWGC 6 cut(s) 426, 535, 773, 827, 893, 1544
ApoI RAATTY 2 cut(s) 1164, 1587
AsiGI ACCGGT 1 cut(s) 573
Asp700I GAANNNNTTC 1 cut(s) 179
AspLEI GCGC 3 cut(s) 43, 319, 511
AsuC2I CCSGG 9 cut(s) 6, 33, 62, 163, 248, 280, 281, 335, 467
AsuHPI GGTGA 4 cut(s) 403, 638, 659, 1469
AsuNHI GCTAGC 2 cut(s) 851, 1784
AvaI CYCGRG 1 cut(s) 279
AvaII GGWCC 8 cut(s) 58, 331, 385, 463, 478, 571, 576, 1502
BaeGI GKGCMC 1 cut(s) 308
BanII GRGCYC 4 cut(s) 38, 308, 1337, 1677
BbrPI CACGTG 1 cut(s) 406
BbsI GAAGAC 4 cut(s) 728, 946, 1669, 1757
Bbv12I GWGCWC 4 cut(s) 362, 745, 1337, 1677
BbvCI CCTCAGC 2 cut(s) 198, 669
BbvI GCAGC 6 cut(s) 438, 547, 785, 839, 880, 1556
BccI CCATC 5 cut(s) 296, 784, 1031, 1282, 1408
BceAI ACGGC 2 cut(s) 100, 385
BciT130I CCWGG 6 cut(s) 71, 383, 389, 1125, 1251, 1790
BcnI CCSGG 9 cut(s) 6, 33, 62, 163, 248, 280, 281, 335, 467
BcoDI GTCTC 5 cut(s) 19, 644, 933, 1389, 1695
BfaI CTAG 3 cut(s) 852, 1368, 1785
BfmI CTRYAG 2 cut(s) 424, 1350
BfoI RGCGCY 1 cut(s) 320
BfrI CTTAAG 1 cut(s) 1208
Bme18I GGWCC 8 cut(s) 58, 331, 385, 463, 478, 571, 576, 1502
BmeT110I CYCGRG 1 cut(s) 279
BmiI GGNNCC 6 cut(s) 47, 60, 306, 453, 479, 480
BmsI GCATC 4 cut(s) 546, 767, 1546, 1567
BmtI GCTAGC 2 cut(s) 855, 1788
BpiI GAAGAC 4 cut(s) 728, 946, 1669, 1757
BplI GAGNNNNNCTC 2 cut(s) 344, 376
Bpu10I CCTNAGC 2 cut(s) 198, 669
BpuEI CTTGAG 2 cut(s) 785, 1120
BpuMI CCSGG 9 cut(s) 6, 33, 62, 163, 248, 280, 281, 335, 467
BsaAI YACGTR 2 cut(s) 406, 549
BsaBI GATNNNNATC 1 cut(s) 611
BsaHI GRCGYC 1 cut(s) 231
BsaJI CCNNGG 5 cut(s) 69, 279, 621, 1185, 1789
BsaWI WCCGGW 2 cut(s) 454, 573
Bse118I RCCGGY 3 cut(s) 435, 573, 1454
Bse1I ACTGG 1 cut(s) 1063
Bse3DI GCAATG 3 cut(s) 693, 867, 1233
Bse8I GATNNNNATC 1 cut(s) 611
BseBI CCWGG 6 cut(s) 71, 383, 389, 1125, 1251, 1790
BseDI CCNNGG 5 cut(s) 69, 279, 621, 1185, 1789
BseGI GGATG 2 cut(s) 1195, 1293
BseJI GATNNNNATC 1 cut(s) 611
BseMI GCAATG 3 cut(s) 693, 867, 1233
BseMII CTCAG 2 cut(s) 212, 660
BseNI ACTGG 1 cut(s) 1063
BseRI GAGGAG 5 cut(s) 458, 608, 782, 1214, 1492
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 6 cut(s) 438, 547, 785, 839, 880, 1556
BseYI CCCAGC 3 cut(s) 377, 538, 559
BsgI GTGCAG 1 cut(s) 386
Bsh1236I CGCG 3 cut(s) 43, 329, 509
BshTI ACCGGT 1 cut(s) 573
BsiHKAI GWGCWC 4 cut(s) 362, 745, 1337, 1677
BsiHKCI CYCGRG 1 cut(s) 279
BslFI GGGAC 5 cut(s) 44, 296, 464, 557, 1783
BsmAI GTCTC 5 cut(s) 19, 644, 933, 1389, 1695
BsmFI GGGAC 5 cut(s) 44, 296, 464, 557, 1783
BsmI GAATGC 2 cut(s) 590, 1099
BsoBI CYCGRG 1 cut(s) 279
Bsp120I GGGCCC 1 cut(s) 304
Bsp1286I GDGCHC 6 cut(s) 38, 308, 362, 745, 1337, 1677
Bsp143I GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
Bsp19I CCATGG 1 cut(s) 1185
BspCNI CTCAG 2 cut(s) 211, 661
BspFNI CGCG 3 cut(s) 43, 329, 509
BspLI GGNNCC 6 cut(s) 47, 60, 306, 453, 479, 480
BspMAI CTGCAG 1 cut(s) 428
BspOI GCTAGC 2 cut(s) 855, 1788
BspPI GGATC 7 cut(s) 81, 153, 258, 510, 601, 629, 1730
BspTI CTTAAG 1 cut(s) 1208
BsrBI CCGCTC 2 cut(s) 124, 355
BsrDI GCAATG 3 cut(s) 693, 867, 1233
BsrFI RCCGGY 3 cut(s) 435, 573, 1454
BsrI ACTGG 1 cut(s) 1063
BssAI RCCGGY 3 cut(s) 435, 573, 1454
BssECI CCNNGG 5 cut(s) 69, 279, 621, 1185, 1789
BssMI GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
BssNI GRCGYC 1 cut(s) 231
BssT1I CCWWGG 2 cut(s) 621, 1185
Bst2UI CCWGG 6 cut(s) 71, 383, 389, 1125, 1251, 1790
Bst4CI ACNGT 2 cut(s) 740, 979
Bst6I CTCTTC 3 cut(s) 487, 1134, 1652
BstACI GRCGYC 1 cut(s) 231
BstAFI CTTAAG 1 cut(s) 1208
BstAPI GCANNNNNTGC 1 cut(s) 866
BstBAI YACGTR 2 cut(s) 406, 549
BstC8I GCNNGC 8 cut(s) 126, 276, 411, 513, 853, 1307, 1690, 1786
BstDEI CTNAG 3 cut(s) 198, 669, 1361
BstDSI CCRYGG 1 cut(s) 1185
BstF5I GGATG 2 cut(s) 1195, 1293
BstFNI CGCG 3 cut(s) 43, 329, 509
BstH2I RGCGCY 1 cut(s) 320
BstHHI GCGC 3 cut(s) 43, 319, 511
BstKTI GATC 9 cut(s) 89, 161, 253, 505, 609, 615, 637, 781, 1738
BstMAI GTCTC 5 cut(s) 19, 644, 933, 1389, 1695
BstMBI GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
BstNI CCWGG 6 cut(s) 71, 383, 389, 1125, 1251, 1790
BstNSI RCATGY 2 cut(s) 928, 1309
BstSFI CTRYAG 2 cut(s) 424, 1350
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 3 cut(s) 43, 329, 509
BstV1I GCAGC 6 cut(s) 438, 547, 785, 839, 880, 1556
BstV2I GAAGAC 4 cut(s) 728, 946, 1669, 1757
BstX2I RGATCY 3 cut(s) 86, 250, 606
BstYI RGATCY 3 cut(s) 86, 250, 606
BtgI CCRYGG 1 cut(s) 1185
BtgZI GCGATG 1 cut(s) 274
BtsCI GGATG 2 cut(s) 1195, 1293
BtsIMutI CAGTG 2 cut(s) 630, 975
Cac8I GCNNGC 8 cut(s) 126, 276, 411, 513, 853, 1307, 1690, 1786
CfoI GCGC 3 cut(s) 43, 319, 511
Cfr10I RCCGGY 3 cut(s) 435, 573, 1454
Cfr9I CCCGGG 1 cut(s) 279
CpoI CGGWCCG 1 cut(s) 331
CseI GACGC 1 cut(s) 239
CsiI ACCWGGT 1 cut(s) 387
Csp6I GTAC 2 cut(s) 550, 1031
CspAI ACCGGT 1 cut(s) 573
CspI CGGWCCG 1 cut(s) 331
CviAII CATG 5 cut(s) 677, 856, 925, 1186, 1306
CviQI GTAC 2 cut(s) 550, 1031
DdeI CTNAG 3 cut(s) 198, 669, 1361
DpnI GATC 9 cut(s) 88, 160, 252, 504, 608, 614, 636, 780, 1737
DpnII GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
DrdI GACNNNNNNGTC 1 cut(s) 329
DseDI GACNNNNNNGTC 1 cut(s) 329
EaeI YGGCCR 1 cut(s) 339
Eam1104I CTCTTC 3 cut(s) 487, 1134, 1652
EarI CTCTTC 3 cut(s) 487, 1134, 1652
EciI GGCGGA 1 cut(s) 139
Ecl136II GAGCTC 2 cut(s) 1335, 1675
Eco130I CCWWGG 2 cut(s) 621, 1185
Eco147I AGGCCT 1 cut(s) 620
Eco24I GRGCYC 4 cut(s) 38, 308, 1337, 1677
Eco47I GGWCC 8 cut(s) 58, 331, 385, 463, 478, 571, 576, 1502
Eco53kI GAGCTC 2 cut(s) 1335, 1675
Eco57I CTGAAG 3 cut(s) 290, 726, 996
Eco72I CACGTG 1 cut(s) 406
Eco88I CYCGRG 1 cut(s) 279
EcoICRI GAGCTC 2 cut(s) 1335, 1675
EcoO109I RGGNCCY 2 cut(s) 304, 478
EcoRII CCWGG 6 cut(s) 69, 381, 387, 1123, 1249, 1788
EcoT14I CCWWGG 2 cut(s) 621, 1185
EcoT38I GRGCYC 4 cut(s) 38, 308, 1337, 1677
ErhI CCWWGG 2 cut(s) 621, 1185
FaeI CATG 5 cut(s) 680, 859, 928, 1189, 1309
FaqI GGGAC 5 cut(s) 44, 296, 464, 557, 1783
FatI CATG 5 cut(s) 676, 855, 924, 1185, 1305
FauI CCCGC 1 cut(s) 36
FauNDI CATATG 1 cut(s) 531
FblI GTMKAC 1 cut(s) 366
FokI GGATG 2 cut(s) 1202, 1300
FriOI GRGCYC 4 cut(s) 38, 308, 1337, 1677
FspBI CTAG 3 cut(s) 852, 1368, 1785
GlaI GCGC 3 cut(s) 42, 318, 510
GsaI CCCAGC 3 cut(s) 381, 542, 563
HaeII RGCGCY 1 cut(s) 320
HgaI GACGC 1 cut(s) 239
HhaI GCGC 3 cut(s) 43, 319, 511
Hin1I GRCGYC 1 cut(s) 231
Hin1II CATG 5 cut(s) 680, 859, 928, 1189, 1309
Hin6I GCGC 3 cut(s) 41, 317, 509
HinP1I GCGC 3 cut(s) 41, 317, 509
HincII GTYRAC 1 cut(s) 367
HindII GTYRAC 1 cut(s) 367
HindIII AAGCTT 1 cut(s) 1622
HinfI GANTC 8 cut(s) 208, 220, 397, 472, 642, 724, 1073, 1181
HphI GGTGA 4 cut(s) 403, 638, 659, 1469
Hpy166II GTNNAC 3 cut(s) 367, 571, 752
Hpy188I TCNGA 7 cut(s) 91, 213, 491, 966, 1070, 1672, 1799
Hpy188III TCNNGA 9 cut(s) 156, 461, 610, 728, 764, 1441, 1514, 1640, 1678
Hpy8I GTNNAC 3 cut(s) 367, 571, 752
Hpy99I CGWCG 4 cut(s) 121, 233, 368, 371
HpyAV CCTTC 4 cut(s) 156, 961, 1020, 1399
HpyCH4III ACNGT 2 cut(s) 740, 979
HpyCH4IV ACGT 2 cut(s) 405, 548
HpyF3I CTNAG 3 cut(s) 198, 669, 1361
HpySE526I ACGT 2 cut(s) 405, 548
Hsp92I GRCGYC 1 cut(s) 231
Hsp92II CATG 5 cut(s) 680, 859, 928, 1189, 1309
HspAI GCGC 3 cut(s) 41, 317, 509
KflI GGGWCCC 1 cut(s) 478
Kzo9I GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
LmnI GCTCC 5 cut(s) 51, 365, 1071, 1332, 1680
Lsp1109I GCAGC 6 cut(s) 438, 547, 785, 839, 880, 1556
LweI GCATC 4 cut(s) 546, 767, 1546, 1567
MabI ACCWGGT 1 cut(s) 387
MaeI CTAG 3 cut(s) 852, 1368, 1785
MaeII ACGT 2 cut(s) 405, 548
MaeIII GTNAC 1 cut(s) 626
MalI GATC 9 cut(s) 88, 160, 252, 504, 608, 614, 636, 780, 1737
MbiI CCGCTC 2 cut(s) 124, 355
MboI GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
MfeI CAATTG 3 cut(s) 1266, 1433, 1581
MflI RGATCY 3 cut(s) 86, 250, 606
MhlI GDGCHC 6 cut(s) 38, 308, 362, 745, 1337, 1677
MluCI AATT 9 cut(s) 102, 710, 1164, 1266, 1433, 1581, 1587, 1607, 1629
MlyI GAGTC 6 cut(s) 217, 406, 651, 718, 1082, 1190
MmeI TCCRAC 2 cut(s) 114, 469
MroXI GAANNNNTTC 1 cut(s) 179
MseI TTAA 2 cut(s) 1209, 1605
MslI CAYNNNNRTG 2 cut(s) 860, 923
MspA1I CMGCKG 2 cut(s) 538, 776
MspCI CTTAAG 1 cut(s) 1208
MunI CAATTG 3 cut(s) 1266, 1433, 1581
Mva1269I GAATGC 2 cut(s) 590, 1099
MvaI CCWGG 6 cut(s) 71, 383, 389, 1125, 1251, 1790
MvnI CGCG 3 cut(s) 43, 329, 509
NciI CCSGG 9 cut(s) 6, 33, 62, 163, 248, 280, 281, 335, 467
NcoI CCATGG 1 cut(s) 1185
NdeI CATATG 1 cut(s) 531
NdeII GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
NheI GCTAGC 2 cut(s) 851, 1784
NlaIII CATG 5 cut(s) 680, 859, 928, 1189, 1309
NlaIV GGNNCC 6 cut(s) 47, 60, 306, 453, 479, 480
NmeAIII GCCGAG 2 cut(s) 17, 234
NmuCI GTSAC 1 cut(s) 626
NspI RCATGY 2 cut(s) 928, 1309
PaeI GCATGC 1 cut(s) 1309
PceI AGGCCT 1 cut(s) 620
PciI ACATGT 1 cut(s) 924
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 297
PctI GAATGC 2 cut(s) 590, 1099
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 2 cut(s) 220, 472
PfoI TCCNGGA 1 cut(s) 60
PinAI ACCGGT 1 cut(s) 573
PleI GAGTC 6 cut(s) 216, 405, 650, 718, 1081, 1189
PmaCI CACGTG 1 cut(s) 406
PmlI CACGTG 1 cut(s) 406
PpsI GAGTC 6 cut(s) 216, 405, 650, 718, 1081, 1189
Ppu21I YACGTR 2 cut(s) 406, 549
PpuMI RGGWCCY 1 cut(s) 478
PscI ACATGT 1 cut(s) 924
Psp124BI GAGCTC 2 cut(s) 1337, 1677
Psp5II RGGWCCY 1 cut(s) 478
Psp6I CCWGG 6 cut(s) 69, 381, 387, 1123, 1249, 1788
PspCI CACGTG 1 cut(s) 406
PspFI CCCAGC 3 cut(s) 377, 538, 559
PspGI CCWGG 6 cut(s) 69, 381, 387, 1123, 1249, 1788
PspN4I GGNNCC 6 cut(s) 47, 60, 306, 453, 479, 480
PspOMI GGGCCC 1 cut(s) 304
PspPPI RGGWCCY 1 cut(s) 478
PstI CTGCAG 1 cut(s) 428
PsuI RGATCY 3 cut(s) 86, 250, 606
PvuII CAGCTG 2 cut(s) 538, 776
RsaI GTAC 2 cut(s) 551, 1032
RsaNI GTAC 2 cut(s) 550, 1031
RseI CAYNNNNRTG 2 cut(s) 860, 923
Rsr2I CGGWCCG 1 cut(s) 331
RsrII CGGWCCG 1 cut(s) 331
SacI GAGCTC 2 cut(s) 1337, 1677
SalI GTCGAC 1 cut(s) 365
SaqAI TTAA 2 cut(s) 1209, 1605
Sau3AI GATC 9 cut(s) 86, 158, 250, 502, 606, 612, 634, 778, 1735
SchI GAGTC 6 cut(s) 217, 406, 651, 718, 1082, 1190
SduI GDGCHC 6 cut(s) 38, 308, 362, 745, 1337, 1677
SexAI ACCWGGT 1 cut(s) 387
SfaNI GCATC 4 cut(s) 546, 767, 1546, 1567
SfcI CTRYAG 2 cut(s) 424, 1350
SgrDI CGTCGACG 1 cut(s) 365
SinI GGWCC 8 cut(s) 58, 331, 385, 463, 478, 571, 576, 1502
SmaI CCCGGG 1 cut(s) 281
SmiMI CAYNNNNRTG 2 cut(s) 860, 923
SmlI CTYRAG 3 cut(s) 764, 1099, 1208
SmoI CTYRAG 3 cut(s) 764, 1099, 1208
SphI GCATGC 1 cut(s) 1309
Sse9I AATT 9 cut(s) 102, 710, 1164, 1266, 1433, 1581, 1587, 1607, 1629
SseBI AGGCCT 1 cut(s) 620
SspI AATATT 1 cut(s) 1485
SspMI CTAG 3 cut(s) 852, 1368, 1785
SstI GAGCTC 2 cut(s) 1337, 1677
StuI AGGCCT 1 cut(s) 620
StyI CCWWGG 2 cut(s) 621, 1185
TaaI ACNGT 2 cut(s) 740, 979
TaiI ACGT 2 cut(s) 408, 551
TaqI TCGA 7 cut(s) 240, 351, 366, 441, 554, 615, 1745
TaqII GACCGA 1 cut(s) 46
TasI AATT 9 cut(s) 102, 710, 1164, 1266, 1433, 1581, 1587, 1607, 1629
TauI GCSGC 6 cut(s) 46, 101, 124, 341, 416, 518
TfiI GAWTC 2 cut(s) 220, 472
Tru1I TTAA 2 cut(s) 1209, 1605
Tru9I TTAA 2 cut(s) 1209, 1605
TscAI CASTG 2 cut(s) 637, 982
TseFI GTSAC 1 cut(s) 626
TseI GCWGC 6 cut(s) 426, 535, 773, 827, 893, 1544
Tsp45I GTSAC 1 cut(s) 626
TspDTI ATGAA 2 cut(s) 837, 1335
TspGWI ACGGA 3 cut(s) 7, 352, 1300
TspMI CCCGGG 1 cut(s) 279
TspRI CASTG 2 cut(s) 637, 982
Vha464I CTTAAG 1 cut(s) 1208
VpaK11BI GGWCC 8 cut(s) 58, 331, 385, 463, 478, 571, 576, 1502
XapI RAATTY 2 cut(s) 1164, 1587
XceI RCATGY 2 cut(s) 928, 1309
XcmI CCANNNNNNNNNTGG 1 cut(s) 385
XmaI CCCGGG 1 cut(s) 279
XmiI GTMKAC 1 cut(s) 366
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 3 cut(s) 852, 1368, 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.