No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g19790 FvH4_3g12580 FvH4_7g18920 FvH4_7g19270 |
| prunus_persica | Prupe.6G198400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0363111 RchiOBHm_Chr2g0111361 |
| rosa_laevigata | RLG00000017889 RLG00000027593 RLG00000027594 RLG00000027617 |
| rosa_roxburghii | Rroxscaffold_4G00293710 |
| rosa_rugosa | Rorug01G0301900 Rorug01G0304500 Rorug01G0304600 Rorug02G0173100 |
| rosa_samantha | Rh1AG310800 Rh1BG273900 Rh1BG276900 Rh1CG293500 Rh1DG304700 Rh1DG307500 Rh2AG226200 Rh2BG238000 Rh2CG229300 Rh2DG233700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 270, 277 |
| AciI | CCGC | 1 cut(s) | 135 |
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcsI | RAATTY | 1 cut(s) | 188 |
| AcyI | GRCGYC | 1 cut(s) | 278 |
| AgsI | TTSAA | 3 cut(s) | 209, 349, 368 |
| AjnI | CCWGG | 1 cut(s) | 273 |
| AluBI | AGCT | 2 cut(s) | 286, 314 |
| AluI | AGCT | 2 cut(s) | 286, 314 |
| AoxI | GGCC | 1 cut(s) | 48 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| ApoI | RAATTY | 1 cut(s) | 188 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 275, 307 |
| AspLEI | GCGC | 1 cut(s) | 280 |
| BanI | GGYRCC | 2 cut(s) | 270, 277 |
| BbvI | GCAGC | 1 cut(s) | 301 |
| BccI | CCATC | 2 cut(s) | 110, 134 |
| BciT130I | CCWGG | 1 cut(s) | 275 |
| BfoI | RGCGCY | 1 cut(s) | 281 |
| BisI | GCNGC | 1 cut(s) | 315 |
| BlsI | GCNGC | 1 cut(s) | 316 |
| Bme1390I | CCNGG | 1 cut(s) | 275 |
| BmiI | GGNNCC | 2 cut(s) | 272, 279 |
| BmrFI | CCNGG | 1 cut(s) | 275 |
| BsaHI | GRCGYC | 1 cut(s) | 278 |
| BsaJI | CCNNGG | 1 cut(s) | 231 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 51, 81 |
| Bse3DI | GCAATG | 3 cut(s) | 103, 181, 229 |
| BseBI | CCWGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 1 cut(s) | 231 |
| BseMI | GCAATG | 3 cut(s) | 103, 181, 229 |
| BseXI | GCAGC | 1 cut(s) | 301 |
| BshFI | GGCC | 1 cut(s) | 50 |
| BshNI | GGYRCC | 2 cut(s) | 270, 277 |
| BsiSI | CCGG | 1 cut(s) | 51 |
| BsnI | GGCC | 1 cut(s) | 50 |
| BspACI | CCGC | 1 cut(s) | 135 |
| BspANI | GGCC | 1 cut(s) | 50 |
| BspLI | GGNNCC | 2 cut(s) | 272, 279 |
| BspT107I | GGYRCC | 2 cut(s) | 270, 277 |
| BsrDI | GCAATG | 3 cut(s) | 103, 181, 229 |
| BssECI | CCNNGG | 1 cut(s) | 231 |
| BssNI | GRCGYC | 1 cut(s) | 278 |
| BssT1I | CCWWGG | 1 cut(s) | 231 |
| Bst2UI | CCWGG | 1 cut(s) | 275 |
| BstACI | GRCGYC | 1 cut(s) | 278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 1 cut(s) | 354 |
| BstH2I | RGCGCY | 1 cut(s) | 281 |
| BstHHI | GCGC | 1 cut(s) | 280 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 171, 180, 219, 270 |
| BstNI | CCWGG | 1 cut(s) | 275 |
| BstSCI | CCNGG | 1 cut(s) | 273 |
| BstV1I | GCAGC | 1 cut(s) | 301 |
| BsuRI | GGCC | 1 cut(s) | 50 |
| BtsI | GCAGTG | 5 cut(s) | 87, 172, 190, 208, 220 |
| BtsIMutI | CAGTG | 5 cut(s) | 87, 172, 190, 208, 220 |
| Cac8I | GCNNGC | 1 cut(s) | 354 |
| CfoI | GCGC | 1 cut(s) | 280 |
| CviAII | CATG | 3 cut(s) | 289, 322, 358 |
| CviJI | RGCY | 4 cut(s) | 50, 286, 314, 352 |
| CviKI_1 | RGCY | 4 cut(s) | 50, 286, 314, 352 |
| DinI | GGCGCC | 1 cut(s) | 279 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| EciI | GGCGGA | 1 cut(s) | 150 |
| Eco130I | CCWWGG | 1 cut(s) | 231 |
| EcoRII | CCWGG | 1 cut(s) | 273 |
| EcoT14I | CCWWGG | 1 cut(s) | 231 |
| EgeI | GGCGCC | 1 cut(s) | 279 |
| EheI | GGCGCC | 1 cut(s) | 279 |
| ErhI | CCWWGG | 1 cut(s) | 231 |
| FaeI | CATG | 3 cut(s) | 292, 325, 361 |
| FaiI | YATR | 4 cut(s) | 197, 290, 323, 359 |
| FatI | CATG | 3 cut(s) | 288, 321, 357 |
| Fnu4HI | GCNGC | 1 cut(s) | 315 |
| Fsp4HI | GCNGC | 1 cut(s) | 315 |
| GlaI | GCGC | 1 cut(s) | 279 |
| GluI | GCNGC | 1 cut(s) | 315 |
| HaeII | RGCGCY | 1 cut(s) | 281 |
| HaeIII | GGCC | 1 cut(s) | 50 |
| HapII | CCGG | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 280 |
| Hin1I | GRCGYC | 1 cut(s) | 278 |
| Hin1II | CATG | 3 cut(s) | 292, 325, 361 |
| Hin6I | GCGC | 1 cut(s) | 278 |
| HinP1I | GCGC | 1 cut(s) | 278 |
| HinfI | GANTC | 1 cut(s) | 237 |
| HpaII | CCGG | 1 cut(s) | 51 |
| Hpy166II | GTNNAC | 1 cut(s) | 70 |
| Hpy188I | TCNGA | 1 cut(s) | 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 70 |
| HpyAV | CCTTC | 4 cut(s) | 8, 25, 81, 203 |
| HpyCH4V | TGCA | 2 cut(s) | 227, 264 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 171, 180, 219, 270 |
| Hsp92I | GRCGYC | 1 cut(s) | 278 |
| Hsp92II | CATG | 3 cut(s) | 292, 325, 361 |
| HspAI | GCGC | 1 cut(s) | 278 |
| KasI | GGCGCC | 1 cut(s) | 277 |
| LmnI | GCTCC | 1 cut(s) | 77 |
| LpnPI | CCDG | 5 cut(s) | 64, 253, 260, 287, 366 |
| Lsp1109I | GCAGC | 1 cut(s) | 301 |
| MluCI | AATT | 2 cut(s) | 188, 252 |
| Mly113I | GGCGCC | 1 cut(s) | 278 |
| MmeI | TCCRAC | 1 cut(s) | 82 |
| MnlI | CCTC | 2 cut(s) | 53, 212 |
| MslI | CAYNNNNRTG | 1 cut(s) | 293 |
| MspI | CCGG | 1 cut(s) | 51 |
| MspR9I | CCNGG | 1 cut(s) | 275 |
| MvaI | CCWGG | 1 cut(s) | 275 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 171, 180, 219, 270 |
| NarI | GGCGCC | 1 cut(s) | 278 |
| NlaIII | CATG | 3 cut(s) | 292, 325, 361 |
| NlaIV | GGNNCC | 2 cut(s) | 272, 279 |
| PfeI | GAWTC | 1 cut(s) | 237 |
| PkrI | GCNGC | 1 cut(s) | 316 |
| PluTI | GGCGCC | 1 cut(s) | 281 |
| Psp6I | CCWGG | 1 cut(s) | 273 |
| PspGI | CCWGG | 1 cut(s) | 273 |
| PspN4I | GGNNCC | 2 cut(s) | 272, 279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 293 |
| SatI | GCNGC | 1 cut(s) | 315 |
| ScrFI | CCNGG | 1 cut(s) | 275 |
| SetI | ASST | 7 cut(s) | 36, 64, 92, 112, 272, 288, 316 |
| SfoI | GGCGCC | 1 cut(s) | 279 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 293 |
| Sse9I | AATT | 2 cut(s) | 188, 252 |
| SsiI | CCGC | 1 cut(s) | 135 |
| SspDI | GGCGCC | 1 cut(s) | 277 |
| StyD4I | CCNGG | 1 cut(s) | 273 |
| StyI | CCWWGG | 1 cut(s) | 231 |
| TasI | AATT | 2 cut(s) | 188, 252 |
| TfiI | GAWTC | 1 cut(s) | 237 |
| TscAI | CASTG | 5 cut(s) | 87, 172, 190, 208, 220 |
| TseI | GCWGC | 1 cut(s) | 314 |
| TspGWI | ACGGA | 1 cut(s) | 264 |
| TspRI | CASTG | 5 cut(s) | 87, 172, 190, 208, 220 |
| XapI | RAATTY | 1 cut(s) | 188 |