Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0005515

Physical Location & Seq

Genomic Coordinates Reverse (-)

12286028 .. 12290423

Gene Structure 4396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG135600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGCTGATGAGGCCGGTTCACATGGCAAGAGAGTATGTATGGTGCCTGAACGTGCGAGGATTCACATGGCTTTAACTTTCCTGCAGTCGAGCAATGCAGTGCAACATATCGTCATCAGGAGTGTGCTCAACATGGGTGTAAACCAGCTTATTTTCCCAGTTTACAGGAGCATCACCGCGCTGCTTCTGCTTTTTCCCTTTGCATACTTTTTGGAGAGAAAAGATAGACCACCACTGAATATATCCCTTGTTATGCAGTTTTTTCTCCTGGGACTTATTGGGGTCACCTGCAATCAAGGATTCTACCTCTTGGGTTTGGAGAACACATCAGCCACATTTGTTTCTGCAGTAGAGAATGCAGTCCCTGCAGGAACATTTCTCATGGCTGCCGTATTAAGAATTGAACAAGTTCACTTGAATAGAAAAGATGGCAAAGCCAAAGTGCTTGGAGTTCTGGCTTCTGTTGCAGGAGCCTCAGTCATAACCTTTTACAAGGGGCCAACTATATATGTTCCTCCAAGGACTTCACCTTCAGGCCAATCCCATATGCTCCTCTCGTTATCTGGAGATGCCAGGGAGAAGAACTGGACCTTTGGTTGCATTTGTGCTATAGGTCATTGCGTATGTTGGTTTAGCTGGATTGTCCTACAAGGACCTGTTTTGAAGAAATACCCAGCTCGCCTCTCAGTCACCTCATTTACTCTCTTCTTTGGCATTCTGCAACTTTCAGCAATTGCAGCGTATGTAGAGAGAGACTCCCAAGAGTGGCAGATCCATTCCGGCAGTGCAATCTTGGGCATTCTCTACTTGGGAGTGGTGGCTTCAGCAATGTCTTATGCAATACAGCTATGGGCGATTGACAAGGGAGGACCGGTGTTTGTTTCAGTGTATATGCCTCTACAGACGTTACTCGTAGATATAATGGACTTGGTCATTATGGGTGCACAATTCTACTTGGGAGGCATTGTTGGAGCAGTGCTGATCGTAGCAGGACTATACCTTGTAGTGTGGGGAAAAAGCAAAGAGAGCAAATTTGGCAAAGAAATGAAGTCGAAAACTTCACCAGTGCCATTGAACATTGATAATCAGATTAAATATTATTCTGAAGAAGATAAAGAATCCTCTCTCGTCCAACCATTGCTCCCTATCTCTTCAAAAACTATGCTTAATATGAGTGTAAGCATGCTTGTTTTCTCAGTTTACAGGAATGTCACCGCGCTGCTTCTGCTGATTCCATTTGCATACTTTTTGGAGAAGAAAGATAGACCACCACTGAATATGTCCCTTGTCATGAAGTTTTTTCTCCTAGGACTTCTTGGGGTGACATGCAATCAAGGCTTGTATCTCTTTGGTTTAAAGAACACCTCCCCCACATTTGTTTCGACAATAGAGAATGCAGTCCCTGCAATAACATTTCTCATGGCTGCCTTATTCAGAATTGAACAAATGCACTTGAATAGAAAATATGGTAAAGCCAAAGTGCTTGGAACTCTTGCTTCTGTTGCTGGAGCCTCAGTCATAACCTTTTACAAGGGGCCAACTATTTATGTTCCTCCAAGTACTTCACCTTTAAGCCAATCCCATATGCTCTACTCATTATTTGGAGATGTCAAGGAGGAGAATTGGACCTTTGGTTACATCTGCGTAATAAGTCATTGCCTATGTTGGTCTACCTGGATTGTGCTACAAGCACCTGTTCTGAAGAACTACCCAGCTCGCCTCTCAGTCACCTCATTTACTCTCTTCTTTGGCATTTTGCAACTTTTAGCAATCGCGGTGTGTGTAGAGAGAGATTCCCAAGCCTGGCAGTTCCATTACGGCAGTCAAGTCTTTGCCATTCTCTACCTGGGAGTGGGGGCTTCAGCAATGGCGAATGTAATACAGATATGGGTGATTGACAAGGGAGGACCAGTGTATGTTTCACTGTATCTGCCTTTACAGACGGCAGTTGTAGCTGTAATGGACTCGCTCGTTTTTGGTGAAGAATTCTACTTGGGAAGCATTATTGGAGCAATGTTGACCATAGCAGGGCTGTACCTGGTGGTCTGGGGAAAAAGGCAAGAGAGCAAAATCAAGGTGGAAACTTCCTCAGTGCCAGGGAACATTAACAGTCTGATAAACTATTGTTCTGGGGGAGAAGAACCCTCTCTTGTTCAAGCATTGCTCCCTACCTCTGCTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

727

Amino Acids

79.8

Weight (kDa)

8.96

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	37 - 162	1.1e-11	EamA-like transporter family
EamA	PF00892	198 - 336	1.1e-12	EamA-like transporter family
EamA	PF00892	382 - 508	4.1e-14	EamA-like transporter family
EamA	PF00892	544 - 682	4e-14	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005515)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12390 FvH4_1g12390
rosa_chinensis	RchiOBHm_Chr2g0100221 RchiOBHm_Chr2g0100231 RchiOBHm_Chr2g0100241
rosa_laevigata	RLG00000016947 RLG00000016948 RLG00000016949
rosa_multiflora	Rmu_sc0002547.1_g000006 Rmu_sc0002547.1_g000013
rosa_roxburghii	Rroxscaffold_2G00142450 Rroxscaffold_2G00142460 Rroxscaffold_2G00142470
rosa_rugosa	Rorug02G0086600 Rorug02G0086700
rosa_samantha	Rh2AG135600 Rh2AG135700 Rh2BG139000 Rh2BG139100 Rh2BG139200 Rh2CG140800 Rh2CG140900 Rh2CG141000 Rh2DG141000 Rh2DG141100 Rh2DG141200
rosa_wichuraiana	Rw2G010590 Rw2G010600 Rw2G010610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	296
AccB1I	GGYRCC	1 cut(s)	43
AccI	GTMKAC	1 cut(s)	1670
AccII	CGCG	3 cut(s)	179, 1217, 1775
AciI	CCGC	3 cut(s)	177, 1215, 1775
AclWI	GGATC	1 cut(s)	766
AcsI	RAATTY	2 cut(s)	1031, 1985
AcuI	CTGAAG	5 cut(s)	516, 807, 1125, 1721, 1845
AfaI	GTAC	2 cut(s)	1561, 2036
AfiI	CCNNNNNNNGG	4 cut(s)	765, 1803, 1852, 2028
AgeI	ACCGGT	1 cut(s)	871
AgsI	TTSAA	8 cut(s)	404, 418, 664, 1075, 1155, 1442, 1456, 2156
AjnI	CCWGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
AluBI	AGCT	6 cut(s)	148, 636, 677, 847, 1715, 1955
AluI	AGCT	6 cut(s)	148, 636, 677, 847, 1715, 1955
Alw21I	GWGCWC	2 cut(s)	129, 946
Alw26I	GTCTC	1 cut(s)	747
Alw44I	GTGCAC	1 cut(s)	942
AlwI	GGATC	1 cut(s)	766
AlwNI	CAGNNNCTG	2 cut(s)	365, 1403
AoxI	GGCC	4 cut(s)	12, 497, 535, 1535
ApaLI	GTGCAC	1 cut(s)	942
ApeKI	GCWGC	5 cut(s)	181, 386, 737, 1219, 1424
ApoI	RAATTY	2 cut(s)	1031, 1985
AsiGI	ACCGGT	1 cut(s)	871
Asp700I	GAANNNNTTC	1 cut(s)	408
AspA2I	CCTAGG	1 cut(s)	1306
AspLEI	GCGC	2 cut(s)	181, 1219
AspS9I	GGNCC	7 cut(s)	497, 588, 653, 869, 1535, 1626, 1907
AvaII	GGWCC	5 cut(s)	588, 653, 869, 1626, 1907
AvrII	CCTAGG	1 cut(s)	1306
BaeGI	GKGCMC	1 cut(s)	946
BanI	GGYRCC	1 cut(s)	43
Bbv12I	GWGCWC	2 cut(s)	129, 946
BbvI	GCAGC	5 cut(s)	168, 373, 749, 1206, 1411
BccI	CCATC	1 cut(s)	422
BceAI	ACGGC	3 cut(s)	374, 1834, 1959
BciT130I	CCWGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
BcoDI	GTCTC	1 cut(s)	747
BfaI	CTAG	2 cut(s)	1307, 2182
BfmI	CTRYAG	5 cut(s)	83, 345, 366, 609, 899
BfuAI	ACCTGC	1 cut(s)	296
BisI	GCNGC	5 cut(s)	182, 387, 738, 1220, 1425
BlnI	CCTAGG	1 cut(s)	1306
BlsI	GCNGC	5 cut(s)	183, 388, 739, 1221, 1426
BmcAI	AGTACT	1 cut(s)	1561
Bme1390I	CCNGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
Bme18I	GGWCC	5 cut(s)	588, 653, 869, 1626, 1907
BmgT120I	GGNCC	7 cut(s)	497, 588, 653, 869, 1535, 1626, 1907
BmiI	GGNNCC	5 cut(s)	45, 472, 498, 1510, 1536
BmrFI	CCNGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
BmrI	ACTGGG	1 cut(s)	152
BmsI	GCATC	2 cut(s)	180, 559
BmuI	ACTGGG	1 cut(s)	152
BplI	GAGNNNNNCTC	2 cut(s)	740, 772
BpmI	CTGGAG	2 cut(s)	585, 1527
BsaJI	CCNNGG	6 cut(s)	268, 518, 573, 1306, 1846, 2096
BsaWI	WCCGGW	1 cut(s)	871
Bsc4I	CCNNNNNNNGG	4 cut(s)	765, 1803, 1852, 2028
Bse118I	RCCGGY	2 cut(s)	14, 871
Bse1I	ACTGG	4 cut(s)	158, 590, 1064, 1910
Bse3DI	GCAATG	8 cut(s)	100, 616, 834, 1136, 1654, 1872, 2019, 2159
BseBI	CCWGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
BseDI	CCNNGG	6 cut(s)	268, 518, 573, 1306, 1846, 2096
BseLI	CCNNNNNNNGG	4 cut(s)	765, 1803, 1852, 2028
BseMI	GCAATG	8 cut(s)	100, 616, 834, 1136, 1654, 1872, 2019, 2159
BseMII	CTCAG	6 cut(s)	489, 699, 1209, 1527, 1737, 2103
BseNI	ACTGG	4 cut(s)	158, 590, 1064, 1910
BseRI	GAGGAG	2 cut(s)	542, 1631
BseSI	GKGCMC	1 cut(s)	946
BseXI	GCAGC	5 cut(s)	168, 373, 749, 1206, 1411
BseYI	CCCAGC	2 cut(s)	673, 1711
Bsh1236I	CGCG	3 cut(s)	179, 1217, 1775
BshFI	GGCC	4 cut(s)	14, 499, 537, 1537
BshNI	GGYRCC	1 cut(s)	43
BshTI	ACCGGT	1 cut(s)	871
BsiHKAI	GWGCWC	2 cut(s)	129, 946
BsiSI	CCGG	3 cut(s)	15, 780, 872
BslFI	GGGAC	4 cut(s)	285, 347, 1267, 1385
BslI	CCNNNNNNNGG	4 cut(s)	765, 1803, 1852, 2028
BsmAI	GTCTC	1 cut(s)	747
BsmFI	GGGAC	4 cut(s)	285, 347, 1267, 1385
BsmI	GAATGC	4 cut(s)	361, 714, 798, 1399
BsnI	GGCC	4 cut(s)	14, 499, 537, 1537
Bsp1286I	GDGCHC	2 cut(s)	129, 946
Bsp143I	GATC	2 cut(s)	771, 981
BspACI	CCGC	3 cut(s)	177, 1215, 1775
BspANI	GGCC	4 cut(s)	14, 499, 537, 1537
BspCNI	CTCAG	6 cut(s)	488, 698, 1208, 1526, 1736, 2102
BspFNI	CGCG	3 cut(s)	179, 1217, 1775
BspHI	TCATGA	1 cut(s)	1290
BspLI	GGNNCC	5 cut(s)	45, 472, 498, 1510, 1536
BspMAI	CTGCAG	3 cut(s)	87, 349, 370
BspMI	ACCTGC	1 cut(s)	296
BspPI	GGATC	1 cut(s)	766
BspT107I	GGYRCC	1 cut(s)	43
BsrDI	GCAATG	8 cut(s)	100, 616, 834, 1136, 1654, 1872, 2019, 2159
BsrFI	RCCGGY	2 cut(s)	14, 871
BsrI	ACTGG	4 cut(s)	158, 590, 1064, 1910
BssAI	RCCGGY	2 cut(s)	14, 871
BssECI	CCNNGG	6 cut(s)	268, 518, 573, 1306, 1846, 2096
BssMI	GATC	2 cut(s)	771, 981
BssT1I	CCWWGG	2 cut(s)	518, 1306
Bst2UI	CCWGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
Bst4CI	ACNGT	2 cut(s)	1926, 2111
Bst6I	CTCTTC	3 cut(s)	710, 1156, 1748
BstAPI	GCANNNNNTGC	2 cut(s)	365, 1403
BstC8I	GCNNGC	3 cut(s)	679, 1184, 1717
BstDEI	CTNAG	6 cut(s)	475, 685, 1195, 1513, 1723, 2089
BstEII	GGTNACC	1 cut(s)	283
BstFNI	CGCG	3 cut(s)	179, 1217, 1775
BstHHI	GCGC	2 cut(s)	181, 1219
BstKTI	GATC	2 cut(s)	774, 984
BstMAI	GTCTC	1 cut(s)	747
BstMBI	GATC	2 cut(s)	771, 981
BstNI	CCWGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
BstNSI	RCATGY	2 cut(s)	1186, 1329
BstPI	GGTNACC	1 cut(s)	283
BstSCI	CCNGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
BstSFI	CTRYAG	5 cut(s)	83, 345, 366, 609, 899
BstSLI	GKGCMC	1 cut(s)	946
BstUI	CGCG	3 cut(s)	179, 1217, 1775
BstV1I	GCAGC	5 cut(s)	168, 373, 749, 1206, 1411
BstX2I	RGATCY	1 cut(s)	771
BstYI	RGATCY	1 cut(s)	771
BsuRI	GGCC	4 cut(s)	14, 499, 537, 1537
BtsI	GCAGTG	3 cut(s)	105, 790, 981
BveI	ACCTGC	1 cut(s)	296
Cac8I	GCNNGC	3 cut(s)	679, 1184, 1717
CaiI	CAGNNNCTG	2 cut(s)	365, 1403
CciI	TCATGA	1 cut(s)	1290
CfoI	GCGC	2 cut(s)	181, 1219
Cfr10I	RCCGGY	2 cut(s)	14, 871
Cfr13I	GGNCC	7 cut(s)	497, 588, 653, 869, 1535, 1626, 1907
CsiI	ACCWGGT	1 cut(s)	2037
Csp6I	GTAC	2 cut(s)	1560, 2035
CspAI	ACCGGT	1 cut(s)	871
CviAII	CATG	8 cut(s)	23, 67, 133, 382, 1183, 1291, 1326, 1420
CviQI	GTAC	2 cut(s)	1560, 2035
DdeI	CTNAG	6 cut(s)	475, 685, 1195, 1513, 1723, 2089
DpnI	GATC	2 cut(s)	773, 983
DpnII	GATC	2 cut(s)	771, 981
DraI	TTTAAA	1 cut(s)	1356
Eam1104I	CTCTTC	3 cut(s)	710, 1156, 1748
EarI	CTCTTC	3 cut(s)	710, 1156, 1748
Eco130I	CCWWGG	2 cut(s)	518, 1306
Eco47I	GGWCC	5 cut(s)	588, 653, 869, 1626, 1907
Eco57I	CTGAAG	5 cut(s)	516, 807, 1125, 1721, 1845
Eco91I	GGTNACC	1 cut(s)	283
EcoO109I	RGGNCCY	1 cut(s)	653
EcoO65I	GGTNACC	1 cut(s)	283
EcoRI	GAATTC	1 cut(s)	1985
EcoRII	CCWGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
EcoT14I	CCWWGG	2 cut(s)	518, 1306
ErhI	CCWWGG	2 cut(s)	518, 1306
FaeI	CATG	8 cut(s)	26, 70, 136, 385, 1186, 1294, 1329, 1423
FaqI	GGGAC	4 cut(s)	285, 347, 1267, 1385
FatI	CATG	8 cut(s)	22, 66, 132, 381, 1182, 1290, 1325, 1419
FauNDI	CATATG	2 cut(s)	546, 1584
FblI	GTMKAC	1 cut(s)	1670
Fnu4HI	GCNGC	5 cut(s)	182, 387, 738, 1220, 1425
Fsp4HI	GCNGC	5 cut(s)	182, 387, 738, 1220, 1425
FspBI	CTAG	2 cut(s)	1307, 2182
GlaI	GCGC	2 cut(s)	180, 1218
GluI	GCNGC	5 cut(s)	182, 387, 738, 1220, 1425
GsaI	CCCAGC	2 cut(s)	677, 1715
GsuI	CTGGAG	2 cut(s)	585, 1527
HaeIII	GGCC	4 cut(s)	14, 499, 537, 1537
HapII	CCGG	3 cut(s)	15, 780, 872
HhaI	GCGC	2 cut(s)	181, 1219
Hin1II	CATG	8 cut(s)	26, 70, 136, 385, 1186, 1294, 1329, 1423
Hin6I	GCGC	2 cut(s)	179, 1217
HinP1I	GCGC	2 cut(s)	179, 1217
HincII	GTYRAC	1 cut(s)	2019
HindII	GTYRAC	1 cut(s)	2019
HinfI	GANTC	7 cut(s)	61, 300, 755, 1118, 1231, 1793, 1964
HpaII	CCGG	3 cut(s)	15, 780, 872
Hpy166II	GTNNAC	8 cut(s)	20, 142, 163, 412, 944, 1201, 1671, 2019
Hpy188I	TCNGA	5 cut(s)	1089, 1105, 1436, 1701, 2115
Hpy188III	TCNNGA	3 cut(s)	118, 564, 1291
Hpy8I	GTNNAC	8 cut(s)	20, 142, 163, 412, 944, 1201, 1671, 2019
HpyAV	CCTTC	1 cut(s)	540
HpyCH4III	ACNGT	2 cut(s)	1926, 2111
HpyCH4IV	ACGT	2 cut(s)	52, 905
HpyF3I	CTNAG	6 cut(s)	475, 685, 1195, 1513, 1723, 2089
HpySE526I	ACGT	2 cut(s)	52, 905
Hsp92II	CATG	8 cut(s)	26, 70, 136, 385, 1186, 1294, 1329, 1423
HspAI	GCGC	2 cut(s)	179, 1217
Kzo9I	GATC	2 cut(s)	771, 981
LmnI	GCTCC	8 cut(s)	168, 470, 555, 971, 1146, 1508, 2009, 2169
Lsp1109I	GCAGC	5 cut(s)	168, 373, 749, 1206, 1411
LweI	GCATC	2 cut(s)	180, 559
MabI	ACCWGGT	1 cut(s)	2037
MaeI	CTAG	2 cut(s)	1307, 2182
MaeII	ACGT	2 cut(s)	52, 905
MaeIII	GTNAC	7 cut(s)	283, 688, 906, 1210, 1321, 1634, 1726
MalI	GATC	2 cut(s)	773, 983
MboI	GATC	2 cut(s)	771, 981
MfeI	CAATTG	1 cut(s)	732
MflI	RGATCY	1 cut(s)	771
MhlI	GDGCHC	2 cut(s)	129, 946
MluCI	AATT	7 cut(s)	399, 732, 947, 1031, 1437, 1621, 1985
MlyI	GAGTC	2 cut(s)	749, 1958
MmeI	TCCRAC	2 cut(s)	949, 1156
MroXI	GAANNNNTTC	1 cut(s)	408
MseI	TTAA	7 cut(s)	74, 395, 1092, 1167, 1355, 1571, 2106
MspI	CCGG	3 cut(s)	15, 780, 872
MspR9I	CCNGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
MunI	CAATTG	1 cut(s)	732
Mva1269I	GAATGC	4 cut(s)	361, 714, 798, 1399
MvaI	CCWGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
MvnI	CGCG	3 cut(s)	179, 1217, 1775
NdeI	CATATG	2 cut(s)	546, 1584
NdeII	GATC	2 cut(s)	771, 981
NlaIII	CATG	8 cut(s)	26, 70, 136, 385, 1186, 1294, 1329, 1423
NlaIV	GGNNCC	5 cut(s)	45, 472, 498, 1510, 1536
NmuCI	GTSAC	5 cut(s)	283, 688, 1210, 1321, 1726
NspI	RCATGY	2 cut(s)	1186, 1329
PaeI	GCATGC	1 cut(s)	1186
PagI	TCATGA	1 cut(s)	1290
PaqCI	CACCTGC	1 cut(s)	296
PctI	GAATGC	4 cut(s)	361, 714, 798, 1399
PdmI	GAANNNNTTC	1 cut(s)	408
PfeI	GAWTC	5 cut(s)	61, 300, 1118, 1231, 1793
PflFI	GACNNNGTC	1 cut(s)	929
PinAI	ACCGGT	1 cut(s)	871
PkrI	GCNGC	5 cut(s)	183, 388, 739, 1221, 1426
PleI	GAGTC	2 cut(s)	749, 1958
PpsI	GAGTC	2 cut(s)	749, 1958
PpuMI	RGGWCCY	1 cut(s)	653
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
PspEI	GGTNACC	1 cut(s)	283
PspFI	CCCAGC	2 cut(s)	673, 1711
PspGI	CCWGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
PspN4I	GGNNCC	5 cut(s)	45, 472, 498, 1510, 1536
PspPI	GGNCC	7 cut(s)	497, 588, 653, 869, 1535, 1626, 1907
PspPPI	RGGWCCY	1 cut(s)	653
PstI	CTGCAG	3 cut(s)	87, 349, 370
PstNI	CAGNNNCTG	2 cut(s)	365, 1403
PsuI	RGATCY	1 cut(s)	771
PsyI	GACNNNGTC	1 cut(s)	929
RsaI	GTAC	2 cut(s)	1561, 2036
RsaNI	GTAC	2 cut(s)	1560, 2035
SaqAI	TTAA	7 cut(s)	74, 395, 1092, 1167, 1355, 1571, 2106
SatI	GCNGC	5 cut(s)	182, 387, 738, 1220, 1425
Sau3AI	GATC	2 cut(s)	771, 981
Sau96I	GGNCC	7 cut(s)	497, 588, 653, 869, 1535, 1626, 1907
SbfI	CCTGCAGG	1 cut(s)	370
ScaI	AGTACT	1 cut(s)	1561
SchI	GAGTC	2 cut(s)	749, 1958
ScrFI	CCNGG	7 cut(s)	269, 574, 1675, 1804, 1847, 2039, 2097
SdaI	CCTGCAGG	1 cut(s)	370
SduI	GDGCHC	2 cut(s)	129, 946
SexAI	ACCWGGT	1 cut(s)	2037
SfaNI	GCATC	2 cut(s)	180, 559
SfcI	CTRYAG	5 cut(s)	83, 345, 366, 609, 899
SinI	GGWCC	5 cut(s)	588, 653, 869, 1626, 1907
SphI	GCATGC	1 cut(s)	1186
Sse8387I	CCTGCAGG	1 cut(s)	370
Sse9I	AATT	7 cut(s)	399, 732, 947, 1031, 1437, 1621, 1985
SsiI	CCGC	3 cut(s)	177, 1215, 1775
SspI	AATATT	1 cut(s)	1097
SspMI	CTAG	2 cut(s)	1307, 2182
StyD4I	CCNGG	7 cut(s)	267, 572, 1673, 1802, 1845, 2037, 2095
StyI	CCWWGG	2 cut(s)	518, 1306
TaaI	ACNGT	2 cut(s)	1926, 2111
TaiI	ACGT	2 cut(s)	55, 908
TaqI	TCGA	3 cut(s)	89, 1052, 1382
TasI	AATT	7 cut(s)	399, 732, 947, 1031, 1437, 1621, 1985
TatI	WGTACW	1 cut(s)	1559
TfiI	GAWTC	5 cut(s)	61, 300, 1118, 1231, 1793
Tru1I	TTAA	7 cut(s)	74, 395, 1092, 1167, 1355, 1571, 2106
Tru9I	TTAA	7 cut(s)	74, 395, 1092, 1167, 1355, 1571, 2106
TseFI	GTSAC	5 cut(s)	283, 688, 1210, 1321, 1726
TseI	GCWGC	5 cut(s)	181, 386, 737, 1219, 1424
Tsp45I	GTSAC	5 cut(s)	283, 688, 1210, 1321, 1726
TspDTI	ATGAA	2 cut(s)	1061, 1307
Tth111I	GACNNNGTC	1 cut(s)	929
VneI	GTGCAC	1 cut(s)	942
VpaK11BI	GGWCC	5 cut(s)	588, 653, 869, 1626, 1907
XapI	RAATTY	2 cut(s)	1031, 1985
XceI	RCATGY	2 cut(s)	1186, 1329
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1843
XmaJI	CCTAGG	1 cut(s)	1306
XmiI	GTMKAC	1 cut(s)	1670
XmnI	GAANNNNTTC	1 cut(s)	408
XspI	CTAG	2 cut(s)	1307, 2182
ZrmI	AGTACT	1 cut(s)	1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.