Rh2BG037600

Heme oxygenase 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0005358
Physical Location & Seq
Forward (+)
2615565 .. 2618306
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG037600.1

Sequence Viewer

Length: 960 bp
ATGGCTTCTTTAACCCCAATTTCGCAATCCCAGTCCCTTTTTAACAAGACCCAGTTCCTCGCTAAACCCAATTTAGGGTCTGATTTTTTGCCCAAGAAATTCTCCGCTTCGTTTCCCAAGATGACTACTAGGTTTCCCACGAAGGCCGGAGTTGTGTCGGCGACGACGGCGGAGATGCCGAAGAAGAGGTACCCCGGAGAGGCAAAAGGGTTTGTGGAGGAGATGAGGTTTGTGGCAATGAAGTTGCATACTAGGGACCAGGCTAAGGAGGGTGAGAAGGAAGTGAAGGAGCCTCAGGAGAGGCCGGTGGCCAAGTGGGACCCGACGCTTGATGGGTACTTGAGGTTTCTTGTGGATAGCAAGTTGGTGTATGACACCCTTGAGGGGATTGTCGACGAGGCTCCCTTCCCTTCTTATGCTGAGTTTAGAGATACTGGATTGGAAAGGTCCGAAAAGTTGGCAAAAGATTTGGAGTGGTTCAAGGAGCAAGGCCATGCCATACCAGAACCTTCTGCTCCTGGTGTAACCTATGCTGAGTATCTTAAGGAACTGTCGGAGAAGGATCCTCAAGCATTTCTCTGCCACTTCTACAATATATACTTTGCTCATTCAGCTGGTGGACGAATGATTGGGAAAAAGGTGGCTGAAATGATCCTCGACAAGAAAGATTTGGAATTCTATAAATGGGATGGTGAACTTTCCCAATTGTTGCAGAATGTGAGGGAGAAATTGAACAAAGTTGCAGAGGTAAGTTCCTTGCTTTTTGATTGCAAAACATGTCTCGTCTGCATCTCTTTGCTTGATCTGACTCTATATATTATTTATATGCATAATGCATCAGAGCTGGACGAGGGAGGAGAAGAACCATTGCTTGGAAGAAACAGAGAAATCATTCAAACATTCAGGGGAAATTCTCCGTCTAATATTGTCATGATAGTGCTGCTGCTACTGCTGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004392 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006778 GO:0006787 GO:0006788 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009648 GO:0009791 GO:0009812 GO:0009813 GO:0009888 GO:0009987 GO:0010019 GO:0010024 GO:0010073 GO:0010075 GO:0010119 GO:0010225 GO:0010228 GO:0010229 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016491 GO:0016705 GO:0018130 GO:0019438 GO:0019439 GO:0020037 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033013 GO:0033014 GO:0033015 GO:0034641 GO:0034644 GO:0040008 GO:0042168 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0046700 GO:0046906 GO:0048037 GO:0048367 GO:0048507 GO:0048509 GO:0048573 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051188 GO:0051202 GO:0051716 GO:0055114 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071494 GO:0071704 GO:0090567 GO:0097159 GO:0104004 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00860 ko01100 ko01110 map00860 map01100 map01110
Pfam Domains
Protein Families
Heme_oxygenase

Protein Analysis

319

Amino Acids

36.2

Weight (kDa)

5.73

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Heme_oxygenase PF01126 110 - 247 8.3e-10 Heme oxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 189
AccB1I GGYRCC 1 cut(s) 189
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 1 cut(s) 393
AciI CCGC 2 cut(s) 105, 170
AclWI GGATC 3 cut(s) 557, 570, 646
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 3 cut(s) 98, 674, 910
AfaI GTAC 2 cut(s) 191, 338
AfiI CCNNNNNNNGG 6 cut(s) 74, 75, 199, 265, 384, 872
AflII CTTAAG 1 cut(s) 542
AflIII ACRYGT 1 cut(s) 776
AgsI TTSAA 3 cut(s) 481, 733, 896
AjnI CCWGG 2 cut(s) 258, 517
AjuI GAANNNNNNNTTGG 2 cut(s) 855, 887
AluBI AGCT 2 cut(s) 614, 844
AluI AGCT 2 cut(s) 614, 844
Alw26I GTCTC 1 cut(s) 785
AlwI GGATC 3 cut(s) 557, 570, 646
AoxI GGCC 4 cut(s) 144, 302, 309, 490
ApeKI GCWGC 2 cut(s) 940, 943
ApoI RAATTY 3 cut(s) 98, 674, 910
Asp700I GAANNNNTTC 1 cut(s) 891
Asp718I GGTACC 1 cut(s) 189
AspS9I GGNCC 3 cut(s) 256, 319, 447
AsuC2I CCSGG 1 cut(s) 195
AsuHPI GGTGA 2 cut(s) 284, 704
AvaII GGWCC 3 cut(s) 256, 319, 447
AxyI CCTNAGG 1 cut(s) 294
BalI TGGCCA 1 cut(s) 311
BamHI GGATCC 1 cut(s) 562
BanI GGYRCC 1 cut(s) 189
BarI GAAGNNNNNNTAC 2 cut(s) 173, 205
BbvI GCAGC 2 cut(s) 927, 930
BccI CCATC 2 cut(s) 326, 683
BceAI ACGGC 1 cut(s) 183
BciT130I CCWGG 2 cut(s) 260, 519
BcnI CCSGG 1 cut(s) 195
BcoDI GTCTC 1 cut(s) 785
BfaI CTAG 2 cut(s) 129, 252
BfrI CTTAAG 1 cut(s) 542
BisI GCNGC 2 cut(s) 941, 944
BlsI GCNGC 2 cut(s) 942, 945
Bme1390I CCNGG 3 cut(s) 195, 260, 519
Bme18I GGWCC 3 cut(s) 256, 319, 447
BmgT120I GGNCC 3 cut(s) 256, 319, 447
BmiI GGNNCC 7 cut(s) 191, 257, 291, 320, 321, 402, 564
BmrFI CCNGG 3 cut(s) 195, 260, 519
BmrI ACTGGG 2 cut(s) 25, 46
BmsI GCATC 3 cut(s) 165, 798, 845
BmuI ACTGGG 2 cut(s) 25, 46
Bpu10I CCTNAGC 1 cut(s) 264
BpuEI CTTGAG 3 cut(s) 361, 401, 552
BpuMI CCSGG 1 cut(s) 195
BsaJI CCNNGG 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 6 cut(s) 74, 75, 199, 265, 384, 872
Bse118I RCCGGY 1 cut(s) 304
Bse1I ACTGG 3 cut(s) 31, 52, 439
Bse21I CCTNAGG 1 cut(s) 294
Bse3DI GCAATG 2 cut(s) 243, 866
BseBI CCWGG 2 cut(s) 260, 519
BseDI CCNNGG 1 cut(s) 193
BseGI GGATG 1 cut(s) 694
BseLI CCNNNNNNNGG 6 cut(s) 74, 75, 199, 265, 384, 872
BseMI GCAATG 2 cut(s) 243, 866
BseMII CTCAG 3 cut(s) 308, 411, 525
BseNI ACTGG 3 cut(s) 31, 52, 439
BseRI GAGGAG 2 cut(s) 233, 870
BseXI GCAGC 2 cut(s) 927, 930
BshFI GGCC 4 cut(s) 146, 304, 311, 492
BshNI GGYRCC 1 cut(s) 189
BsiSI CCGG 3 cut(s) 147, 195, 305
BslFI GGGAC 3 cut(s) 19, 269, 332
BslI CCNNNNNNNGG 6 cut(s) 74, 75, 199, 265, 384, 872
BsmAI GTCTC 1 cut(s) 785
BsmFI GGGAC 3 cut(s) 19, 269, 332
BsnI GGCC 4 cut(s) 146, 304, 311, 492
Bsp143I GATC 3 cut(s) 562, 651, 802
BspACI CCGC 2 cut(s) 105, 170
BspANI GGCC 4 cut(s) 146, 304, 311, 492
BspCNI CTCAG 3 cut(s) 307, 412, 526
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 7 cut(s) 191, 257, 291, 320, 321, 402, 564
BspPI GGATC 3 cut(s) 557, 570, 646
BspT107I GGYRCC 1 cut(s) 189
BspTI CTTAAG 1 cut(s) 542
BsrDI GCAATG 2 cut(s) 243, 866
BsrFI RCCGGY 1 cut(s) 304
BsrI ACTGG 3 cut(s) 31, 52, 439
BssAI RCCGGY 1 cut(s) 304
BssECI CCNNGG 1 cut(s) 193
BssMI GATC 3 cut(s) 562, 651, 802
Bst2UI CCWGG 2 cut(s) 260, 519
Bst4CI ACNGT 1 cut(s) 552
Bst6I CTCTTC 1 cut(s) 179
BstAFI CTTAAG 1 cut(s) 542
BstDEI CTNAG 4 cut(s) 264, 294, 420, 534
BstF5I GGATG 1 cut(s) 694
BstKTI GATC 3 cut(s) 565, 654, 805
BstMAI GTCTC 1 cut(s) 785
BstMBI GATC 3 cut(s) 562, 651, 802
BstMWI GCNNNNNNNGC 3 cut(s) 167, 611, 949
BstNI CCWGG 2 cut(s) 260, 519
BstNSI RCATGY 1 cut(s) 780
BstSCI CCNGG 3 cut(s) 193, 258, 517
BstV1I GCAGC 2 cut(s) 927, 930
BstX2I RGATCY 1 cut(s) 562
BstYI RGATCY 1 cut(s) 562
Bsu36I CCTNAGG 1 cut(s) 294
BsuRI GGCC 4 cut(s) 146, 304, 311, 492
BtsCI GGATG 1 cut(s) 694
CciI TCATGA 1 cut(s) 930
Cfr10I RCCGGY 1 cut(s) 304
Cfr13I GGNCC 3 cut(s) 256, 319, 447
CseI GACGC 1 cut(s) 334
Csp6I GTAC 2 cut(s) 190, 337
CviAII CATG 3 cut(s) 494, 777, 931
CviQI GTAC 2 cut(s) 190, 337
DdeI CTNAG 4 cut(s) 264, 294, 420, 534
DpnI GATC 3 cut(s) 564, 653, 804
DpnII GATC 3 cut(s) 562, 651, 802
EaeI YGGCCR 1 cut(s) 309
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
EciI GGCGGA 1 cut(s) 185
Eco47I GGWCC 3 cut(s) 256, 319, 447
Eco81I CCTNAGG 1 cut(s) 294
EcoO109I RGGNCCY 1 cut(s) 319
EcoRI GAATTC 1 cut(s) 674
EcoRII CCWGG 2 cut(s) 258, 517
EcoT22I ATGCAT 2 cut(s) 831, 838
FaeI CATG 3 cut(s) 497, 780, 934
FaqI GGGAC 3 cut(s) 19, 269, 332
FatI CATG 3 cut(s) 493, 776, 930
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 2 cut(s) 941, 944
FokI GGATG 1 cut(s) 701
Fsp4HI GCNGC 2 cut(s) 941, 944
FspBI CTAG 2 cut(s) 129, 252
GluI GCNGC 2 cut(s) 941, 944
HaeIII GGCC 4 cut(s) 146, 304, 311, 492
HapII CCGG 3 cut(s) 147, 195, 305
HgaI GACGC 1 cut(s) 334
Hin1II CATG 3 cut(s) 497, 780, 934
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 1 cut(s) 808
HpaII CCGG 3 cut(s) 147, 195, 305
HphI GGTGA 2 cut(s) 284, 704
Hpy166II GTNNAC 3 cut(s) 394, 620, 695
Hpy188I TCNGA 5 cut(s) 82, 451, 556, 807, 841
Hpy188III TCNNGA 2 cut(s) 296, 931
Hpy8I GTNNAC 3 cut(s) 394, 620, 695
Hpy99I CGWCG 4 cut(s) 166, 169, 328, 398
HpyAV CCTTC 7 cut(s) 136, 271, 280, 415, 420, 519, 553
HpyCH4III ACNGT 1 cut(s) 552
HpyCH4V TGCA 7 cut(s) 247, 712, 743, 771, 789, 829, 836
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 611, 949
HpyF3I CTNAG 4 cut(s) 264, 294, 420, 534
Hsp92II CATG 3 cut(s) 497, 780, 934
KflI GGGWCCC 1 cut(s) 319
KpnI GGTACC 1 cut(s) 193
Kzo9I GATC 3 cut(s) 562, 651, 802
LmnI GCTCC 4 cut(s) 289, 406, 484, 520
Lsp1109I GCAGC 2 cut(s) 927, 930
LweI GCATC 3 cut(s) 165, 798, 845
MaeI CTAG 2 cut(s) 129, 252
MaeIII GTNAC 1 cut(s) 523
MalI GATC 3 cut(s) 564, 653, 804
MboI GATC 3 cut(s) 562, 651, 802
MboII GAAGA 4 cut(s) 193, 196, 872, 888
MfeI CAATTG 1 cut(s) 704
MflI RGATCY 1 cut(s) 562
MlsI TGGCCA 1 cut(s) 311
MluCI AATT 7 cut(s) 18, 70, 98, 674, 704, 728, 910
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 1 cut(s) 802
MmeI TCCRAC 1 cut(s) 534
Mox20I TGGCCA 1 cut(s) 311
Mph1103I ATGCAT 2 cut(s) 831, 838
MroXI GAANNNNTTC 1 cut(s) 891
MscI TGGCCA 1 cut(s) 311
MseI TTAA 3 cut(s) 11, 42, 543
MslI CAYNNNNRTG 1 cut(s) 935
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 614
MspCI CTTAAG 1 cut(s) 542
MspI CCGG 3 cut(s) 147, 195, 305
MspR9I CCNGG 3 cut(s) 195, 260, 519
MunI CAATTG 1 cut(s) 704
MvaI CCWGG 2 cut(s) 260, 519
MwoI GCNNNNNNNGC 3 cut(s) 167, 611, 949
NciI CCSGG 1 cut(s) 195
NdeII GATC 3 cut(s) 562, 651, 802
NlaIII CATG 3 cut(s) 497, 780, 934
NlaIV GGNNCC 7 cut(s) 191, 257, 291, 320, 321, 402, 564
NsiI ATGCAT 2 cut(s) 831, 838
NspI RCATGY 1 cut(s) 780
PagI TCATGA 1 cut(s) 930
PciI ACATGT 1 cut(s) 776
PdmI GAANNNNTTC 1 cut(s) 891
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 2 cut(s) 942, 945
PleI GAGTC 1 cut(s) 802
PpsI GAGTC 1 cut(s) 802
PpuMI RGGWCCY 1 cut(s) 319
PscI ACATGT 1 cut(s) 776
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 258, 517
PspGI CCWGG 2 cut(s) 258, 517
PspN4I GGNNCC 7 cut(s) 191, 257, 291, 320, 321, 402, 564
PspPI GGNCC 3 cut(s) 256, 319, 447
PspPPI RGGWCCY 1 cut(s) 319
PsuI RGATCY 1 cut(s) 562
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 2 cut(s) 191, 338
RsaNI GTAC 2 cut(s) 190, 337
RseI CAYNNNNRTG 1 cut(s) 935
SalI GTCGAC 1 cut(s) 392
SaqAI TTAA 3 cut(s) 11, 42, 543
SatI GCNGC 2 cut(s) 941, 944
Sau3AI GATC 3 cut(s) 562, 651, 802
Sau96I GGNCC 3 cut(s) 256, 319, 447
SchI GAGTC 1 cut(s) 802
ScrFI CCNGG 3 cut(s) 195, 260, 519
SfaNI GCATC 3 cut(s) 165, 798, 845
SinI GGWCC 3 cut(s) 256, 319, 447
SmiMI CAYNNNNRTG 1 cut(s) 935
SmlI CTYRAG 4 cut(s) 340, 380, 542, 567
SmoI CTYRAG 4 cut(s) 340, 380, 542, 567
Sse9I AATT 7 cut(s) 18, 70, 98, 674, 704, 728, 910
SsiI CCGC 2 cut(s) 105, 170
SspI AATATT 1 cut(s) 925
SspMI CTAG 2 cut(s) 129, 252
StyD4I CCNGG 3 cut(s) 193, 258, 517
TaaI ACNGT 1 cut(s) 552
TaqI TCGA 2 cut(s) 393, 657
TasI AATT 7 cut(s) 18, 70, 98, 674, 704, 728, 910
Tru1I TTAA 3 cut(s) 11, 42, 543
Tru9I TTAA 3 cut(s) 11, 42, 543
TseI GCWGC 2 cut(s) 940, 943
TspDTI ATGAA 1 cut(s) 254
TspGWI ACGGA 1 cut(s) 906
Van91I CCANNNNNTGG 1 cut(s) 872
Vha464I CTTAAG 1 cut(s) 542
VpaK11BI GGWCC 3 cut(s) 256, 319, 447
XapI RAATTY 3 cut(s) 98, 674, 910
XceI RCATGY 1 cut(s) 780
XmiI GTMKAC 1 cut(s) 393
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 2 cut(s) 129, 252
Zsp2I ATGCAT 2 cut(s) 831, 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.