Rh2DG236100

Maf-like protein DDB_G0281937 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0002073
Physical Location & Seq
Forward (+)
23532819 .. 23535679
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG236100.1

Sequence Viewer

Length: 234 bp
ATGAAGGTGCTAGCTGTCAGGGAAAAACCATCCAGCAAGGAAGAAGCACGGCAATTTTTGAAAGACTATTCTGGAGGACATGCAGCAACAGTGGGATCTGTGCTTGTTACAAACCTTAAAACAGGATTCAGTAAAGGAGAATGGGACCGAGTGGAGATCTATTTCCATGAAATACCAGATGAAGCCATTGAGAAGCTGCGCTGCCTGAACCACGGATCATTATATTCATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Maf

Protein Analysis

77

Amino Acids

8.66

Weight (kDa)

6.83

Isoelectric Point (pI)

22.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Maf PF02545 5 - 65 1.1e-07 Maf-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 103, 223
AgsI TTSAA 1 cut(s) 61
AluBI AGCT 2 cut(s) 14, 196
AluI AGCT 2 cut(s) 14, 196
AlwI GGATC 2 cut(s) 103, 223
ApeKI GCWGC 3 cut(s) 83, 196, 201
AspLEI GCGC 1 cut(s) 201
AspS9I GGNCC 1 cut(s) 145
AsuNHI GCTAGC 1 cut(s) 10
AvaII GGWCC 1 cut(s) 145
BbvI GCAGC 3 cut(s) 95, 183, 188
BccI CCATC 1 cut(s) 37
BceAI ACGGC 1 cut(s) 65
BfaI CTAG 1 cut(s) 11
BglII AGATCT 1 cut(s) 156
BisI GCNGC 3 cut(s) 84, 197, 202
BlsI GCNGC 3 cut(s) 85, 198, 203
Bme18I GGWCC 1 cut(s) 145
BmgT120I GGNCC 1 cut(s) 145
BmiI GGNNCC 1 cut(s) 146
BmtI GCTAGC 1 cut(s) 14
BpmI CTGGAG 1 cut(s) 93
BsaJI CCNNGG 1 cut(s) 211
BseDI CCNNGG 1 cut(s) 211
BseGI GGATG 1 cut(s) 29
BseXI GCAGC 3 cut(s) 95, 183, 188
BslFI GGGAC 1 cut(s) 158
BsmFI GGGAC 1 cut(s) 158
Bsp143I GATC 3 cut(s) 95, 156, 215
BspLI GGNNCC 1 cut(s) 146
BspOI GCTAGC 1 cut(s) 14
BspPI GGATC 2 cut(s) 103, 223
BssECI CCNNGG 1 cut(s) 211
BssMI GATC 3 cut(s) 95, 156, 215
Bst4CI ACNGT 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 12
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 1 cut(s) 29
BstHHI GCGC 1 cut(s) 201
BstKTI GATC 3 cut(s) 98, 159, 218
BstMBI GATC 3 cut(s) 95, 156, 215
BstNSI RCATGY 1 cut(s) 83
BstV1I GCAGC 3 cut(s) 95, 183, 188
BstX2I RGATCY 2 cut(s) 95, 156
BstYI RGATCY 2 cut(s) 95, 156
BtgI CCRYGG 1 cut(s) 211
BtsCI GGATG 1 cut(s) 29
BtsIMutI CAGTG 1 cut(s) 96
Cac8I GCNNGC 1 cut(s) 12
CfoI GCGC 1 cut(s) 201
Cfr13I GGNCC 1 cut(s) 145
CviAII CATG 2 cut(s) 80, 167
CviJI RGCY 3 cut(s) 14, 185, 196
CviKI_1 RGCY 3 cut(s) 14, 185, 196
DpnI GATC 3 cut(s) 97, 158, 217
DpnII GATC 3 cut(s) 95, 156, 215
Eco47I GGWCC 1 cut(s) 145
FaeI CATG 2 cut(s) 83, 170
FaiI YATR 3 cut(s) 81, 168, 223
FaqI GGGAC 1 cut(s) 158
FatI CATG 2 cut(s) 79, 166
Fnu4HI GCNGC 3 cut(s) 84, 197, 202
FokI GGATG 1 cut(s) 16
Fsp4HI GCNGC 3 cut(s) 84, 197, 202
FspBI CTAG 1 cut(s) 11
GlaI GCGC 1 cut(s) 200
GluI GCNGC 3 cut(s) 84, 197, 202
GsuI CTGGAG 1 cut(s) 93
HhaI GCGC 1 cut(s) 201
Hin1II CATG 2 cut(s) 83, 170
Hin6I GCGC 1 cut(s) 199
HinP1I GCGC 1 cut(s) 199
HinfI GANTC 1 cut(s) 126
Hpy188III TCNNGA 1 cut(s) 72
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4V TGCA 1 cut(s) 83
Hsp92II CATG 2 cut(s) 83, 170
HspAI GCGC 1 cut(s) 199
Kzo9I GATC 3 cut(s) 95, 156, 215
LpnPI CCDG 6 cut(s) 4, 46, 57, 108, 189, 218
Lsp1109I GCAGC 3 cut(s) 95, 183, 188
MaeI CTAG 1 cut(s) 11
MaeIII GTNAC 1 cut(s) 106
MalI GATC 3 cut(s) 97, 158, 217
MboI GATC 3 cut(s) 95, 156, 215
MboII GAAGA 1 cut(s) 53
MflI RGATCY 2 cut(s) 95, 156
MluCI AATT 1 cut(s) 53
MnlI CCTC 1 cut(s) 68
MseI TTAA 1 cut(s) 117
NdeII GATC 3 cut(s) 95, 156, 215
NheI GCTAGC 1 cut(s) 10
NlaIII CATG 2 cut(s) 83, 170
NlaIV GGNNCC 1 cut(s) 146
NspI RCATGY 1 cut(s) 83
PfeI GAWTC 1 cut(s) 126
PkrI GCNGC 3 cut(s) 85, 198, 203
PspN4I GGNNCC 1 cut(s) 146
PspPI GGNCC 1 cut(s) 145
PsuI RGATCY 2 cut(s) 95, 156
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 3 cut(s) 84, 197, 202
Sau3AI GATC 3 cut(s) 95, 156, 215
Sau96I GGNCC 1 cut(s) 145
SetI ASST 4 cut(s) 9, 16, 117, 198
SinI GGWCC 1 cut(s) 145
Sse9I AATT 1 cut(s) 53
SspMI CTAG 1 cut(s) 11
TaaI ACNGT 1 cut(s) 91
TaqII GACCGA 1 cut(s) 162
TasI AATT 1 cut(s) 53
TfiI GAWTC 1 cut(s) 126
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TscAI CASTG 1 cut(s) 96
TseI GCWGC 3 cut(s) 83, 196, 201
TspDTI ATGAA 4 cut(s) 17, 183, 195, 216
TspGWI ACGGA 1 cut(s) 228
TspRI CASTG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 145
XceI RCATGY 1 cut(s) 83
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.