Rh7AG047700

Maf-like protein DDB_G0281937 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002073
Physical Location & Seq
Forward (+)
3244736 .. 3249112
4377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG047700.1

Sequence Viewer

Length: 531 bp
ATGTTGGATATGAAGACCATCTTCTTTTTCCTTGTAGGAATACCTTGTTACAGCATCCAAGAACCAGATCTTACTACAGACATTGACGAAAAAAGCATCCGAAAGGAGAAACCGGAGGAGTTGGTTATGGTTCTTGCTCAGGCAAAGGTTGATGCAATCATATCAAAAATACAAACTACCCATAGTAAAGAGAAGGATGCTGAACCTGAACCAACAATTGTAATTGTGGCAGATACAGCAGAAGCCATCCGGCCTAAGCTCCCAGTTGATGACTACGTAAAGGATGCTGAACCAACGCTATTAATTACCTCTGATCAAGTGGTAGTCTATGAAGGTGCTGTCAGGGAAAAACCATCCAGCAAGGAAGAAGCACGGCAATTTTTGAAAGACTATTCTGGAGGACATGCAGCAACAGTGGGATCTGTGCTTGTTACAAACCTTAAAACAGGATTCAGTAAAGGAGAATGGGACCGAGTGGAGATCTATTTCCATGAAATACCAGATGAAGCCATTGAGAAGCTGCAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Maf

Protein Analysis

176

Amino Acids

19.72

Weight (kDa)

4.72

Isoelectric Point (pI)

17.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Maf PF02545 25 - 173 1.5e-16 Maf-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 427
AgsI TTSAA 1 cut(s) 385
AluBI AGCT 2 cut(s) 259, 520
AluI AGCT 2 cut(s) 259, 520
AlwI GGATC 1 cut(s) 427
AoxI GGCC 1 cut(s) 251
ApeKI GCWGC 2 cut(s) 407, 520
AseI ATTAAT 1 cut(s) 302
AspS9I GGNCC 1 cut(s) 469
AvaII GGWCC 1 cut(s) 469
BbsI GAAGAC 1 cut(s) 20
BbvI GCAGC 2 cut(s) 419, 507
BccI CCATC 3 cut(s) 26, 254, 361
BceAI ACGGC 1 cut(s) 389
BclI TGATCA 1 cut(s) 313
BfmI CTRYAG 1 cut(s) 75
BglII AGATCT 2 cut(s) 67, 480
BisI GCNGC 2 cut(s) 408, 521
BlsI GCNGC 2 cut(s) 409, 522
Bme18I GGWCC 1 cut(s) 469
BmgT120I GGNCC 1 cut(s) 469
BmiI GGNNCC 1 cut(s) 470
BmrI ACTGGG 1 cut(s) 257
BmsI GCATC 5 cut(s) 63, 105, 142, 187, 274
BmuI ACTGGG 1 cut(s) 257
BpiI GAAGAC 1 cut(s) 20
BpmI CTGGAG 1 cut(s) 417
Bpu10I CCTNAGC 2 cut(s) 138, 255
BsaAI YACGTR 1 cut(s) 277
BsaWI WCCGGW 1 cut(s) 112
Bse1I ACTGG 1 cut(s) 263
BseGI GGATG 6 cut(s) 54, 96, 202, 246, 289, 353
BseMII CTCAG 1 cut(s) 152
BseNI ACTGG 1 cut(s) 263
BseRI GAGGAG 1 cut(s) 131
BseXI GCAGC 2 cut(s) 419, 507
BshFI GGCC 1 cut(s) 253
BsiSI CCGG 2 cut(s) 113, 250
BslFI GGGAC 1 cut(s) 482
BsmFI GGGAC 1 cut(s) 482
BsnI GGCC 1 cut(s) 253
Bsp143I GATC 4 cut(s) 67, 313, 419, 480
BspANI GGCC 1 cut(s) 253
BspCNI CTCAG 1 cut(s) 151
BspLI GGNNCC 1 cut(s) 470
BspPI GGATC 1 cut(s) 427
BsrI ACTGG 1 cut(s) 263
BssMI GATC 4 cut(s) 67, 313, 419, 480
Bst4CI ACNGT 1 cut(s) 415
BstBAI YACGTR 1 cut(s) 277
BstDEI CTNAG 2 cut(s) 138, 255
BstF5I GGATG 6 cut(s) 54, 96, 202, 246, 289, 353
BstKTI GATC 4 cut(s) 70, 316, 422, 483
BstMBI GATC 4 cut(s) 67, 313, 419, 480
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstNSI RCATGY 1 cut(s) 407
BstSFI CTRYAG 1 cut(s) 75
BstSNI TACGTA 1 cut(s) 277
BstV1I GCAGC 2 cut(s) 419, 507
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 3 cut(s) 67, 419, 480
BstYI RGATCY 3 cut(s) 67, 419, 480
BsuRI GGCC 1 cut(s) 253
BtsCI GGATG 6 cut(s) 54, 96, 202, 246, 289, 353
BtsIMutI CAGTG 1 cut(s) 420
Cfr13I GGNCC 1 cut(s) 469
CviAII CATG 2 cut(s) 404, 491
CviJI RGCY 5 cut(s) 245, 253, 259, 509, 520
CviKI_1 RGCY 5 cut(s) 245, 253, 259, 509, 520
DdeI CTNAG 2 cut(s) 138, 255
DpnI GATC 4 cut(s) 69, 315, 421, 482
DpnII GATC 4 cut(s) 67, 313, 419, 480
Eco105I TACGTA 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 469
FaeI CATG 2 cut(s) 407, 494
FaiI YATR 7 cut(s) 11, 128, 161, 183, 330, 405, 492
FalI AAGNNNNNCTT 1 cut(s) 37
FaqI GGGAC 1 cut(s) 482
FatI CATG 2 cut(s) 403, 490
FbaI TGATCA 1 cut(s) 313
Fnu4HI GCNGC 2 cut(s) 408, 521
FokI GGATG 6 cut(s) 41, 83, 209, 233, 296, 340
Fsp4HI GCNGC 2 cut(s) 408, 521
GluI GCNGC 2 cut(s) 408, 521
GsuI CTGGAG 1 cut(s) 417
HaeIII GGCC 1 cut(s) 253
HapII CCGG 2 cut(s) 113, 250
Hin1II CATG 2 cut(s) 407, 494
HinfI GANTC 1 cut(s) 450
HpaII CCGG 2 cut(s) 113, 250
Hpy188I TCNGA 3 cut(s) 101, 313, 530
Hpy188III TCNNGA 1 cut(s) 396
HpyAV CCTTC 2 cut(s) 187, 326
HpyCH4III ACNGT 1 cut(s) 415
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 3 cut(s) 155, 407, 523
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
HpyF3I CTNAG 2 cut(s) 138, 255
HpySE526I ACGT 1 cut(s) 276
Hsp92II CATG 2 cut(s) 407, 494
Ksp22I TGATCA 1 cut(s) 313
Kzo9I GATC 4 cut(s) 67, 313, 419, 480
LmnI GCTCC 1 cut(s) 264
Lsp1109I GCAGC 2 cut(s) 419, 507
LweI GCATC 5 cut(s) 63, 105, 142, 187, 274
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 2 cut(s) 47, 430
MalI GATC 4 cut(s) 69, 315, 421, 482
MboI GATC 4 cut(s) 67, 313, 419, 480
MboII GAAGA 3 cut(s) 13, 25, 377
MfeI CAATTG 1 cut(s) 216
MflI RGATCY 3 cut(s) 67, 419, 480
MluCI AATT 4 cut(s) 216, 222, 303, 377
MnlI CCTC 3 cut(s) 109, 319, 392
MseI TTAA 2 cut(s) 302, 441
MspI CCGG 2 cut(s) 113, 250
MunI CAATTG 1 cut(s) 216
MwoI GCNNNNNNNGC 1 cut(s) 236
NdeII GATC 4 cut(s) 67, 313, 419, 480
NlaIII CATG 2 cut(s) 407, 494
NlaIV GGNNCC 1 cut(s) 470
NspI RCATGY 1 cut(s) 407
PfeI GAWTC 1 cut(s) 450
PkrI GCNGC 2 cut(s) 409, 522
Ppu21I YACGTR 1 cut(s) 277
PshBI ATTAAT 1 cut(s) 302
PspN4I GGNNCC 1 cut(s) 470
PspPI GGNCC 1 cut(s) 469
PsuI RGATCY 3 cut(s) 67, 419, 480
SaqAI TTAA 2 cut(s) 302, 441
SatI GCNGC 2 cut(s) 408, 521
Sau3AI GATC 4 cut(s) 67, 313, 419, 480
Sau96I GGNCC 1 cut(s) 469
SetI ASST 9 cut(s) 46, 150, 208, 261, 279, 311, 337, 441, 522
SfaNI GCATC 5 cut(s) 63, 105, 142, 187, 274
SfcI CTRYAG 1 cut(s) 75
SinI GGWCC 1 cut(s) 469
SnaBI TACGTA 1 cut(s) 277
Sse9I AATT 4 cut(s) 216, 222, 303, 377
TaaI ACNGT 1 cut(s) 415
TaiI ACGT 1 cut(s) 279
TaqII GACCGA 1 cut(s) 486
TasI AATT 4 cut(s) 216, 222, 303, 377
TfiI GAWTC 1 cut(s) 450
Tru1I TTAA 2 cut(s) 302, 441
Tru9I TTAA 2 cut(s) 302, 441
TscAI CASTG 1 cut(s) 420
TseI GCWGC 2 cut(s) 407, 520
TspDTI ATGAA 4 cut(s) 26, 345, 507, 519
TspRI CASTG 1 cut(s) 420
VpaK11BI GGWCC 1 cut(s) 469
VspI ATTAAT 1 cut(s) 302
XceI RCATGY 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.