Rh2DG509100

Mitochondrial PGP phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
73298100 .. 73309342
11243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG509100.1

Sequence Viewer

Length: 546 bp
ATGGTGGTTTCTTCTTCCTTGGCAACTTCATCTTCAGCAGCAACAGAAGCAGAAGCAGAAGCTCTTTTAAATTGGAAGTCAAGCCTTGACAATACAAAAGCATGTCTCTCTTGTCCTCGATTGAAGAAACCGGCTGGGACAGCAGAAGAGATCGAGAAGCATTTTGCTTGTAAGTCGTCGCATCTTATTATGGTGGGTGATCGACCCTTGACTGATATTGTCTATGGGAATCAAAATGGCTTTCTAACTATCTTAACTGGACCTTTGAGTCTTGCTGAGGAGCCATTCATTGTTAGGCAGGTGAGGAAACTAGAAACAGCCCTTCTGAATAGTTGGTCTAGGAAGGGGTTAAAACCCATGAGTCATAGGTTGTTGCCAGATGGCATGCAGTGTGTGAAACATCCACCACCTCTGACTGAGACCCACTTGAAAAGCTGCACAAGAATTCGCACTAGCAGCCACAGAACAATGGATAATGCTTACAATGAGTCGATGACAGCACCCTCATCTCCAAAATATTCAAATGACCATCCTCAGAACCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

181

Amino Acids

19.94

Weight (kDa)

8.84

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGP_phosphatase PF09419 35 - 88 5.4e-10 Mitochondrial PGP phosphatase
Hydrolase_like PF13242 45 - 86 4e-06 HAD-hyrolase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 289
AasI GACNNNNNNGTC 1 cut(s) 267
Acc36I ACCTGC 1 cut(s) 289
AcsI RAATTY 1 cut(s) 444
AcuI CTGAAG 1 cut(s) 18
AgsI TTSAA 3 cut(s) 124, 430, 522
AluBI AGCT 2 cut(s) 62, 435
AluI AGCT 2 cut(s) 62, 435
Alw26I GTCTC 2 cut(s) 110, 413
ApeKI GCWGC 3 cut(s) 38, 435, 456
ApoI RAATTY 1 cut(s) 444
AspS9I GGNCC 1 cut(s) 260
AsuHPI GGTGA 2 cut(s) 209, 313
AvaII GGWCC 1 cut(s) 260
BbvCI CCTCAGC 1 cut(s) 276
BbvI GCAGC 3 cut(s) 50, 422, 468
BccI CCATC 2 cut(s) 374, 537
BcoDI GTCTC 2 cut(s) 110, 413
BfaI CTAG 3 cut(s) 311, 339, 453
BfuAI ACCTGC 1 cut(s) 289
BisI GCNGC 3 cut(s) 39, 436, 457
BlsI GCNGC 3 cut(s) 40, 437, 458
Bme18I GGWCC 1 cut(s) 260
BmgT120I GGNCC 1 cut(s) 260
BmiI GGNNCC 1 cut(s) 282
BmsI GCATC 1 cut(s) 190
Bpu10I CCTNAGC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 1 cut(s) 18
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 262
BseDI CCNNGG 1 cut(s) 18
BseGI GGATG 2 cut(s) 400, 529
BseMII CTCAG 2 cut(s) 267, 408
BseNI ACTGG 1 cut(s) 262
BseRI GAGGAG 1 cut(s) 293
BseXI GCAGC 3 cut(s) 50, 422, 468
BseYI CCCAGC 1 cut(s) 134
BsgI GTGCAG 1 cut(s) 421
BsiSI CCGG 1 cut(s) 131
BslFI GGGAC 1 cut(s) 151
BsmAI GTCTC 2 cut(s) 110, 413
BsmFI GGGAC 1 cut(s) 151
Bso31I GGTCTC 1 cut(s) 413
Bsp143I GATC 2 cut(s) 150, 199
BspCNI CTCAG 2 cut(s) 268, 409
BspLI GGNNCC 1 cut(s) 282
BspMI ACCTGC 1 cut(s) 289
BspTNI GGTCTC 1 cut(s) 413
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 1 cut(s) 262
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 1 cut(s) 18
BssMI GATC 2 cut(s) 150, 199
BssT1I CCWWGG 1 cut(s) 18
Bst6I CTCTTC 1 cut(s) 141
BstC8I GCNNGC 1 cut(s) 386
BstDEI CTNAG 3 cut(s) 276, 417, 534
BstF5I GGATG 2 cut(s) 400, 529
BstKTI GATC 2 cut(s) 153, 202
BstMAI GTCTC 2 cut(s) 110, 413
BstMBI GATC 2 cut(s) 150, 199
BstMWI GCNNNNNNNGC 3 cut(s) 47, 140, 456
BstNSI RCATGY 2 cut(s) 105, 388
BstV1I GCAGC 3 cut(s) 50, 422, 468
BtsCI GGATG 2 cut(s) 400, 529
BtsI GCAGTG 1 cut(s) 395
BtsIMutI CAGTG 2 cut(s) 395, 541
BveI ACCTGC 1 cut(s) 289
Cac8I GCNNGC 1 cut(s) 386
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 1 cut(s) 260
CviAII CATG 3 cut(s) 102, 358, 385
CviJI RGCY 8 cut(s) 62, 84, 134, 240, 283, 320, 435, 459
CviKI_1 RGCY 8 cut(s) 62, 84, 134, 240, 283, 320, 435, 459
DdeI CTNAG 3 cut(s) 276, 417, 534
DpnI GATC 2 cut(s) 152, 201
DpnII GATC 2 cut(s) 150, 199
DraI TTTAAA 1 cut(s) 69
DrdI GACNNNNNNGTC 1 cut(s) 267
DseDI GACNNNNNNGTC 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
Eco130I CCWWGG 1 cut(s) 18
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 260
Eco57I CTGAAG 1 cut(s) 18
EcoRI GAATTC 1 cut(s) 444
EcoT14I CCWWGG 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 3 cut(s) 105, 361, 388
FaiI YATR 6 cut(s) 103, 191, 225, 359, 366, 386
FaqI GGGAC 1 cut(s) 151
FatI CATG 3 cut(s) 101, 357, 384
Fnu4HI GCNGC 3 cut(s) 39, 436, 457
FokI GGATG 2 cut(s) 387, 516
Fsp4HI GCNGC 3 cut(s) 39, 436, 457
FspBI CTAG 3 cut(s) 311, 339, 453
GluI GCNGC 3 cut(s) 39, 436, 457
GsaI CCCAGC 1 cut(s) 138
HapII CCGG 1 cut(s) 131
Hin1II CATG 3 cut(s) 105, 361, 388
HinfI GANTC 4 cut(s) 229, 268, 361, 488
HpaII CCGG 1 cut(s) 131
HphI GGTGA 2 cut(s) 209, 313
Hpy188I TCNGA 3 cut(s) 327, 414, 537
Hpy188III TCNNGA 1 cut(s) 154
Hpy99I CGWCG 1 cut(s) 181
HpyAV CCTTC 2 cut(s) 332, 337
HpyCH4V TGCA 2 cut(s) 388, 438
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 140, 456
HpyF3I CTNAG 3 cut(s) 276, 417, 534
Hsp92II CATG 3 cut(s) 105, 361, 388
Kzo9I GATC 2 cut(s) 150, 199
LmnI GCTCC 1 cut(s) 280
LpnPI CCDG 5 cut(s) 120, 144, 243, 284, 390
Lsp1109I GCAGC 3 cut(s) 50, 422, 468
LweI GCATC 1 cut(s) 190
MaeI CTAG 3 cut(s) 311, 339, 453
MalI GATC 2 cut(s) 152, 201
MboI GATC 2 cut(s) 150, 199
MboII GAAGA 5 cut(s) 3, 6, 24, 136, 158
MluCI AATT 2 cut(s) 70, 444
MlyI GAGTC 3 cut(s) 277, 370, 497
MnlI CCTC 6 cut(s) 126, 271, 297, 420, 514, 543
MseI TTAA 3 cut(s) 68, 254, 350
MspI CCGG 1 cut(s) 131
MwoI GCNNNNNNNGC 3 cut(s) 47, 140, 456
NdeII GATC 2 cut(s) 150, 199
NlaIII CATG 3 cut(s) 105, 361, 388
NlaIV GGNNCC 1 cut(s) 282
NspI RCATGY 2 cut(s) 105, 388
PaeI GCATGC 1 cut(s) 388
PaqCI CACCTGC 1 cut(s) 289
PfeI GAWTC 1 cut(s) 229
PkrI GCNGC 3 cut(s) 40, 437, 458
PleI GAGTC 3 cut(s) 276, 369, 496
PpsI GAGTC 3 cut(s) 276, 369, 496
PspFI CCCAGC 1 cut(s) 134
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 1 cut(s) 260
SaqAI TTAA 3 cut(s) 68, 254, 350
SatI GCNGC 3 cut(s) 39, 436, 457
Sau3AI GATC 2 cut(s) 150, 199
Sau96I GGNCC 1 cut(s) 260
SchI GAGTC 3 cut(s) 277, 370, 497
SetI ASST 6 cut(s) 64, 265, 303, 371, 412, 437
SfaNI GCATC 1 cut(s) 190
SinI GGWCC 1 cut(s) 260
SphI GCATGC 1 cut(s) 388
Sse9I AATT 2 cut(s) 70, 444
SspI AATATT 1 cut(s) 518
SspMI CTAG 3 cut(s) 311, 339, 453
StyI CCWWGG 1 cut(s) 18
TaqI TCGA 4 cut(s) 118, 153, 202, 491
TasI AATT 2 cut(s) 70, 444
TfiI GAWTC 1 cut(s) 229
Tru1I TTAA 3 cut(s) 68, 254, 350
Tru9I TTAA 3 cut(s) 68, 254, 350
TscAI CASTG 1 cut(s) 395
TseI GCWGC 3 cut(s) 38, 435, 456
TspDTI ATGAA 2 cut(s) 18, 277
TspRI CASTG 1 cut(s) 395
VpaK11BI GGWCC 1 cut(s) 260
XapI RAATTY 1 cut(s) 444
XceI RCATGY 2 cut(s) 105, 388
XspI CTAG 3 cut(s) 311, 339, 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.