photosynthetic electron transport in photosystem I
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55370 AT1G55370 |
| fragaria_vesca | FvH4_1g28070 FvH4_1g28070 FvH4_4g18560 FvH4_4g18560 |
| malus_domestica | MD14G1002400.v1.1 |
| prunus_persica | Prupe.7G003600_v2.0.a1 |
| pyrus_communis | pycom49g00190 |
| rosa_chinensis | RchiOBHm_Chr3g0497181 |
| rosa_laevigata | RLG00000000831 RLG00000022473 |
| rosa_multiflora | Rmu_sc0002276.1_g000005 Rmu_sc0002893.1_g000013 Rmu_sc0007568.1_g000002 Rmu_ssc0000474.1_g000020 |
| rosa_roxburghii | Rroxscaffold_6G00388300 |
| rosa_rugosa | Rorug03G0291600 |
| rosa_samantha | Rh3AG334900 Rh3BG372600 Rh3CG369000 Rh3DG369900 Rh7CG503300 Rh7DG471700 |
| rosa_wichuraiana | Rw3G029440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 879 |
| AatII | GACGTC | 1 cut(s) | 561 |
| Acc36I | ACCTGC | 1 cut(s) | 690 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 520, 743, 801 |
| AccI | GTMKAC | 1 cut(s) | 952 |
| AccII | CGCG | 1 cut(s) | 269 |
| AciI | CCGC | 1 cut(s) | 49 |
| AcoI | YGGCCR | 4 cut(s) | 166, 745, 817, 1057 |
| AcsI | RAATTY | 1 cut(s) | 1025 |
| AcuI | CTGAAG | 1 cut(s) | 306 |
| AcyI | GRCGYC | 1 cut(s) | 558 |
| AfaI | GTAC | 2 cut(s) | 64, 536 |
| AfeI | AGCGCT | 1 cut(s) | 1121 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 175, 288, 373, 520, 743, 801, 815 |
| AflII | CTTAAG | 1 cut(s) | 886 |
| AflIII | ACRYGT | 1 cut(s) | 999 |
| AgsI | TTSAA | 5 cut(s) | 114, 125, 184, 527, 989 |
| AjnI | CCWGG | 2 cut(s) | 147, 1009 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 143, 175 |
| AluBI | AGCT | 5 cut(s) | 104, 574, 648, 725, 994 |
| AluI | AGCT | 5 cut(s) | 104, 574, 648, 725, 994 |
| Alw21I | GWGCWC | 1 cut(s) | 1074 |
| Alw26I | GTCTC | 7 cut(s) | 331, 401, 407, 413, 438, 586, 921 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 833 |
| Ama87I | CYCGRG | 1 cut(s) | 924 |
| Aor51HI | AGCGCT | 1 cut(s) | 1121 |
| AoxI | GGCC | 6 cut(s) | 166, 259, 745, 817, 1057, 1091 |
| ApeKI | GCWGC | 3 cut(s) | 101, 231, 250 |
| ApoI | RAATTY | 1 cut(s) | 1025 |
| AspLEI | GCGC | 2 cut(s) | 922, 1122 |
| AspS9I | GGNCC | 3 cut(s) | 26, 806, 1091 |
| AsuHPI | GGTGA | 2 cut(s) | 206, 642 |
| AvaI | CYCGRG | 1 cut(s) | 924 |
| AvaII | GGWCC | 2 cut(s) | 26, 806 |
| AxyI | CCTNAGG | 2 cut(s) | 474, 1095 |
| BalI | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| BanII | GRGCYC | 1 cut(s) | 451 |
| Bbv12I | GWGCWC | 1 cut(s) | 1074 |
| BbvI | GCAGC | 3 cut(s) | 113, 237, 243 |
| BccI | CCATC | 4 cut(s) | 140, 248, 642, 974 |
| BceAI | ACGGC | 2 cut(s) | 153, 1048 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 188, 222, 884, 918 |
| BciT130I | CCWGG | 2 cut(s) | 149, 1011 |
| BclI | TGATCA | 1 cut(s) | 498 |
| BcoDI | GTCTC | 7 cut(s) | 331, 401, 407, 413, 438, 586, 921 |
| BfoI | RGCGCY | 1 cut(s) | 1123 |
| BfrI | CTTAAG | 1 cut(s) | 886 |
| BfuAI | ACCTGC | 1 cut(s) | 690 |
| BisI | GCNGC | 3 cut(s) | 102, 232, 251 |
| BlsI | GCNGC | 3 cut(s) | 103, 233, 252 |
| Bme1390I | CCNGG | 2 cut(s) | 149, 1011 |
| Bme18I | GGWCC | 2 cut(s) | 26, 806 |
| BmeT110I | CYCGRG | 1 cut(s) | 924 |
| BmgT120I | GGNCC | 3 cut(s) | 26, 806, 1091 |
| BmiI | GGNNCC | 2 cut(s) | 807, 1092 |
| BmrFI | CCNGG | 2 cut(s) | 149, 1011 |
| BmsI | GCATC | 2 cut(s) | 237, 372 |
| BpmI | CTGGAG | 1 cut(s) | 720 |
| BpuEI | CTTGAG | 1 cut(s) | 1000 |
| BsaHI | GRCGYC | 1 cut(s) | 558 |
| BsaI | GGTCTC | 2 cut(s) | 438, 586 |
| BsaJI | CCNNGG | 4 cut(s) | 15, 169, 367, 1009 |
| BsaWI | WCCGGW | 1 cut(s) | 23 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 266, 296, 884, 914 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 175, 288, 373, 520, 743, 801, 815 |
| Bse1I | ACTGG | 2 cut(s) | 915, 1060 |
| Bse21I | CCTNAGG | 2 cut(s) | 474, 1095 |
| Bse3DI | GCAATG | 1 cut(s) | 12 |
| BseBI | CCWGG | 2 cut(s) | 149, 1011 |
| BseDI | CCNNGG | 4 cut(s) | 15, 169, 367, 1009 |
| BseGI | GGATG | 2 cut(s) | 363, 791 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 175, 288, 373, 520, 743, 801, 815 |
| BseMI | GCAATG | 1 cut(s) | 12 |
| BseMII | CTCAG | 4 cut(s) | 412, 418, 488, 975 |
| BseNI | ACTGG | 2 cut(s) | 915, 1060 |
| BseRI | GAGGAG | 1 cut(s) | 384 |
| BseXI | GCAGC | 3 cut(s) | 113, 237, 243 |
| Bsh1236I | CGCG | 1 cut(s) | 269 |
| BshFI | GGCC | 6 cut(s) | 168, 261, 747, 819, 1059, 1093 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1074 |
| BsiHKCI | CYCGRG | 1 cut(s) | 924 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 175, 288, 373, 520, 743, 801, 815 |
| BsmAI | GTCTC | 7 cut(s) | 331, 401, 407, 413, 438, 586, 921 |
| BsnI | GGCC | 6 cut(s) | 168, 261, 747, 819, 1059, 1093 |
| Bso31I | GGTCTC | 2 cut(s) | 438, 586 |
| BsoBI | CYCGRG | 1 cut(s) | 924 |
| Bsp1286I | GDGCHC | 2 cut(s) | 451, 1074 |
| Bsp143I | GATC | 3 cut(s) | 412, 498, 683 |
| BspACI | CCGC | 1 cut(s) | 49 |
| BspANI | GGCC | 6 cut(s) | 168, 261, 747, 819, 1059, 1093 |
| BspCNI | CTCAG | 4 cut(s) | 411, 417, 487, 974 |
| BspFNI | CGCG | 1 cut(s) | 269 |
| BspHI | TCATGA | 2 cut(s) | 454, 1021 |
| BspLI | GGNNCC | 2 cut(s) | 807, 1092 |
| BspMI | ACCTGC | 1 cut(s) | 690 |
| BspQI | GCTCTTC | 2 cut(s) | 456, 984 |
| BspTI | CTTAAG | 1 cut(s) | 886 |
| BspTNI | GGTCTC | 2 cut(s) | 438, 586 |
| BsrDI | GCAATG | 1 cut(s) | 12 |
| BsrI | ACTGG | 2 cut(s) | 915, 1060 |
| BssECI | CCNNGG | 4 cut(s) | 15, 169, 367, 1009 |
| BssMI | GATC | 3 cut(s) | 412, 498, 683 |
| BssNI | GRCGYC | 1 cut(s) | 558 |
| Bst2UI | CCWGG | 2 cut(s) | 149, 1011 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 304, 643 |
| Bst6I | CTCTTC | 3 cut(s) | 456, 970, 984 |
| BstACI | GRCGYC | 1 cut(s) | 558 |
| BstAFI | CTTAAG | 1 cut(s) | 886 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 8 cut(s) | 92, 398, 404, 474, 614, 810, 961, 1095 |
| BstDSI | CCRYGG | 2 cut(s) | 15, 169 |
| BstEII | GGTNACC | 1 cut(s) | 702 |
| BstF5I | GGATG | 2 cut(s) | 363, 791 |
| BstFNI | CGCG | 1 cut(s) | 269 |
| BstH2I | RGCGCY | 1 cut(s) | 1123 |
| BstHHI | GCGC | 2 cut(s) | 922, 1122 |
| BstKTI | GATC | 3 cut(s) | 415, 501, 686 |
| BstMAI | GTCTC | 7 cut(s) | 331, 401, 407, 413, 438, 586, 921 |
| BstMBI | GATC | 3 cut(s) | 412, 498, 683 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 665 |
| BstNI | CCWGG | 2 cut(s) | 149, 1011 |
| BstNSI | RCATGY | 1 cut(s) | 1003 |
| BstPI | GGTNACC | 1 cut(s) | 702 |
| BstSCI | CCNGG | 2 cut(s) | 147, 1009 |
| BstUI | CGCG | 1 cut(s) | 269 |
| BstV1I | GCAGC | 3 cut(s) | 113, 237, 243 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 139, 444, 617 |
| Bsu36I | CCTNAGG | 2 cut(s) | 474, 1095 |
| BsuRI | GGCC | 6 cut(s) | 168, 261, 747, 819, 1059, 1093 |
| BtgI | CCRYGG | 2 cut(s) | 15, 169 |
| BtsCI | GGATG | 2 cut(s) | 363, 791 |
| BtsI | GCAGTG | 1 cut(s) | 1074 |
| BtsIMutI | CAGTG | 6 cut(s) | 169, 300, 504, 922, 969, 1074 |
| BveI | ACCTGC | 1 cut(s) | 690 |
| CaiI | CAGNNNCTG | 1 cut(s) | 833 |
| CciI | TCATGA | 2 cut(s) | 454, 1021 |
| CfoI | GCGC | 2 cut(s) | 922, 1122 |
| Cfr13I | GGNCC | 3 cut(s) | 26, 806, 1091 |
| CseI | GACGC | 2 cut(s) | 258, 665 |
| Csp6I | GTAC | 2 cut(s) | 63, 535 |
| CviAII | CATG | 9 cut(s) | 286, 293, 429, 455, 515, 520, 1000, 1022, 1104 |
| CviQI | GTAC | 2 cut(s) | 63, 535 |
| DdeI | CTNAG | 8 cut(s) | 92, 398, 404, 474, 614, 810, 961, 1095 |
| DpnI | GATC | 3 cut(s) | 414, 500, 685 |
| DpnII | GATC | 3 cut(s) | 412, 498, 683 |
| EaeI | YGGCCR | 4 cut(s) | 166, 745, 817, 1057 |
| Eam1104I | CTCTTC | 3 cut(s) | 456, 970, 984 |
| EarI | CTCTTC | 3 cut(s) | 456, 970, 984 |
| Eco24I | GRGCYC | 1 cut(s) | 451 |
| Eco31I | GGTCTC | 2 cut(s) | 438, 586 |
| Eco47I | GGWCC | 2 cut(s) | 26, 806 |
| Eco47III | AGCGCT | 1 cut(s) | 1121 |
| Eco57I | CTGAAG | 1 cut(s) | 306 |
| Eco81I | CCTNAGG | 2 cut(s) | 474, 1095 |
| Eco88I | CYCGRG | 1 cut(s) | 924 |
| Eco91I | GGTNACC | 1 cut(s) | 702 |
| EcoO109I | RGGNCCY | 2 cut(s) | 806, 1091 |
| EcoO65I | GGTNACC | 1 cut(s) | 702 |
| EcoRI | GAATTC | 1 cut(s) | 1025 |
| EcoRII | CCWGG | 2 cut(s) | 147, 1009 |
| EcoT38I | GRGCYC | 1 cut(s) | 451 |
| FaeI | CATG | 9 cut(s) | 289, 296, 432, 458, 518, 523, 1003, 1025, 1107 |
| FatI | CATG | 9 cut(s) | 285, 292, 428, 454, 514, 519, 999, 1021, 1103 |
| FauI | CCCGC | 1 cut(s) | 56 |
| FbaI | TGATCA | 1 cut(s) | 498 |
| FblI | GTMKAC | 1 cut(s) | 952 |
| Fnu4HI | GCNGC | 3 cut(s) | 102, 232, 251 |
| FokI | GGATG | 2 cut(s) | 350, 778 |
| FriOI | GRGCYC | 1 cut(s) | 451 |
| Fsp4HI | GCNGC | 3 cut(s) | 102, 232, 251 |
| GlaI | GCGC | 2 cut(s) | 921, 1121 |
| GluI | GCNGC | 3 cut(s) | 102, 232, 251 |
| GsuI | CTGGAG | 1 cut(s) | 720 |
| HaeII | RGCGCY | 1 cut(s) | 1123 |
| HaeIII | GGCC | 6 cut(s) | 168, 261, 747, 819, 1059, 1093 |
| HapII | CCGG | 1 cut(s) | 24 |
| HgaI | GACGC | 2 cut(s) | 258, 665 |
| HhaI | GCGC | 2 cut(s) | 922, 1122 |
| Hin1I | GRCGYC | 1 cut(s) | 558 |
| Hin1II | CATG | 9 cut(s) | 289, 296, 432, 458, 518, 523, 1003, 1025, 1107 |
| Hin6I | GCGC | 2 cut(s) | 920, 1120 |
| HinP1I | GCGC | 2 cut(s) | 920, 1120 |
| HinfI | GANTC | 8 cut(s) | 84, 217, 479, 509, 544, 596, 758, 1100 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 2 cut(s) | 206, 642 |
| Hpy166II | GTNNAC | 3 cut(s) | 142, 953, 1115 |
| Hpy188I | TCNGA | 4 cut(s) | 368, 595, 639, 688 |
| Hpy188III | TCNNGA | 9 cut(s) | 221, 244, 410, 416, 455, 476, 737, 926, 1022 |
| Hpy8I | GTNNAC | 3 cut(s) | 142, 953, 1115 |
| Hpy99I | CGWCG | 1 cut(s) | 560 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 304, 643 |
| HpyCH4IV | ACGT | 2 cut(s) | 138, 558 |
| HpyCH4V | TGCA | 2 cut(s) | 101, 1053 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 665 |
| HpyF3I | CTNAG | 8 cut(s) | 92, 398, 404, 474, 614, 810, 961, 1095 |
| HpySE526I | ACGT | 2 cut(s) | 138, 558 |
| Hsp92I | GRCGYC | 1 cut(s) | 558 |
| Hsp92II | CATG | 9 cut(s) | 289, 296, 432, 458, 518, 523, 1003, 1025, 1107 |
| HspAI | GCGC | 2 cut(s) | 920, 1120 |
| Ksp22I | TGATCA | 1 cut(s) | 498 |
| Kzo9I | GATC | 3 cut(s) | 412, 498, 683 |
| LguI | GCTCTTC | 2 cut(s) | 456, 984 |
| LmnI | GCTCC | 3 cut(s) | 318, 853, 892 |
| Lsp1109I | GCAGC | 3 cut(s) | 113, 237, 243 |
| LweI | GCATC | 2 cut(s) | 237, 372 |
| MaeII | ACGT | 2 cut(s) | 138, 558 |
| MaeIII | GTNAC | 4 cut(s) | 194, 541, 603, 702 |
| MalI | GATC | 3 cut(s) | 414, 500, 685 |
| MboI | GATC | 3 cut(s) | 412, 498, 683 |
| MhlI | GDGCHC | 2 cut(s) | 451, 1074 |
| MlsI | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| MluCI | AATT | 6 cut(s) | 67, 442, 729, 764, 874, 1025 |
| MluNI | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| MlyI | GAGTC | 3 cut(s) | 226, 473, 538 |
| MmeI | TCCRAC | 2 cut(s) | 634, 952 |
| MnlI | CCTC | 7 cut(s) | 72, 292, 362, 365, 483, 744, 933 |
| Mox20I | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| MscI | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| MseI | TTAA | 2 cut(s) | 629, 887 |
| MslI | CAYNNNNRTG | 2 cut(s) | 137, 245 |
| Msp20I | TGGCCA | 3 cut(s) | 747, 819, 1059 |
| MspA1I | CMGCKG | 1 cut(s) | 104 |
| MspCI | CTTAAG | 1 cut(s) | 886 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 2 cut(s) | 149, 1011 |
| MvaI | CCWGG | 2 cut(s) | 149, 1011 |
| MvnI | CGCG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 665 |
| NdeII | GATC | 3 cut(s) | 412, 498, 683 |
| NlaIII | CATG | 9 cut(s) | 289, 296, 432, 458, 518, 523, 1003, 1025, 1107 |
| NlaIV | GGNNCC | 2 cut(s) | 807, 1092 |
| NmuCI | GTSAC | 3 cut(s) | 194, 541, 603 |
| NspI | RCATGY | 1 cut(s) | 1003 |
| PaeR7I | CTCGAG | 1 cut(s) | 924 |
| PagI | TCATGA | 2 cut(s) | 454, 1021 |
| PciI | ACATGT | 1 cut(s) | 999 |
| PciSI | GCTCTTC | 2 cut(s) | 456, 984 |
| PfeI | GAWTC | 5 cut(s) | 84, 509, 596, 758, 1100 |
| PflFI | GACNNNGTC | 1 cut(s) | 557 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 520, 743, 801 |
| PkrI | GCNGC | 3 cut(s) | 103, 233, 252 |
| PleI | GAGTC | 3 cut(s) | 225, 473, 538 |
| PpsI | GAGTC | 3 cut(s) | 225, 473, 538 |
| PpuMI | RGGWCCY | 1 cut(s) | 806 |
| PscI | ACATGT | 1 cut(s) | 999 |
| PsiI | TTATAA | 1 cut(s) | 879 |
| Psp5II | RGGWCCY | 1 cut(s) | 806 |
| Psp6I | CCWGG | 2 cut(s) | 147, 1009 |
| PspEI | GGTNACC | 1 cut(s) | 702 |
| PspGI | CCWGG | 2 cut(s) | 147, 1009 |
| PspN4I | GGNNCC | 2 cut(s) | 807, 1092 |
| PspPI | GGNCC | 3 cut(s) | 26, 806, 1091 |
| PspPPI | RGGWCCY | 1 cut(s) | 806 |
| PstNI | CAGNNNCTG | 1 cut(s) | 833 |
| PsyI | GACNNNGTC | 1 cut(s) | 557 |
| PvuII | CAGCTG | 1 cut(s) | 104 |
| RsaI | GTAC | 2 cut(s) | 64, 536 |
| RsaNI | GTAC | 2 cut(s) | 63, 535 |
| RseI | CAYNNNNRTG | 2 cut(s) | 137, 245 |
| SapI | GCTCTTC | 2 cut(s) | 456, 984 |
| SaqAI | TTAA | 2 cut(s) | 629, 887 |
| SatI | GCNGC | 3 cut(s) | 102, 232, 251 |
| Sau3AI | GATC | 3 cut(s) | 412, 498, 683 |
| Sau96I | GGNCC | 3 cut(s) | 26, 806, 1091 |
| SchI | GAGTC | 3 cut(s) | 226, 473, 538 |
| ScrFI | CCNGG | 2 cut(s) | 149, 1011 |
| SduI | GDGCHC | 2 cut(s) | 451, 1074 |
| SfaNI | GCATC | 2 cut(s) | 237, 372 |
| Sfr274I | CTCGAG | 1 cut(s) | 924 |
| SinI | GGWCC | 2 cut(s) | 26, 806 |
| SlaI | CTCGAG | 1 cut(s) | 924 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 137, 245 |
| SmlI | CTYRAG | 3 cut(s) | 886, 924, 1015 |
| SmoI | CTYRAG | 3 cut(s) | 886, 924, 1015 |
| Sse9I | AATT | 6 cut(s) | 67, 442, 729, 764, 874, 1025 |
| SsiI | CCGC | 1 cut(s) | 49 |
| StyD4I | CCNGG | 2 cut(s) | 147, 1009 |
| TaaI | ACNGT | 3 cut(s) | 16, 304, 643 |
| TaiI | ACGT | 2 cut(s) | 141, 561 |
| TaqI | TCGA | 3 cut(s) | 411, 904, 925 |
| TasI | AATT | 6 cut(s) | 67, 442, 729, 764, 874, 1025 |
| TatI | WGTACW | 2 cut(s) | 62, 534 |
| TfiI | GAWTC | 5 cut(s) | 84, 509, 596, 758, 1100 |
| Tru1I | TTAA | 2 cut(s) | 629, 887 |
| Tru9I | TTAA | 2 cut(s) | 629, 887 |
| TscAI | CASTG | 6 cut(s) | 169, 307, 511, 922, 969, 1074 |
| TseFI | GTSAC | 3 cut(s) | 194, 541, 603 |
| TseI | GCWGC | 3 cut(s) | 101, 231, 250 |
| Tsp45I | GTSAC | 3 cut(s) | 194, 541, 603 |
| TspDTI | ATGAA | 3 cut(s) | 417, 443, 1038 |
| TspRI | CASTG | 6 cut(s) | 169, 307, 511, 922, 969, 1074 |
| Tth111I | GACNNNGTC | 1 cut(s) | 557 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 520, 743, 801 |
| Vha464I | CTTAAG | 1 cut(s) | 886 |
| VpaK11BI | GGWCC | 2 cut(s) | 26, 806 |
| XapI | RAATTY | 1 cut(s) | 1025 |
| XceI | RCATGY | 1 cut(s) | 1003 |
| XhoI | CTCGAG | 1 cut(s) | 924 |
| XmiI | GTMKAC | 1 cut(s) | 952 |
| ZraI | GACGTC | 1 cut(s) | 559 |