Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0403241 RchiOBHm_Chr5g0028651 |
| rosa_laevigata | RLG00000013260 RLG00000034224 |
| rosa_roxburghii | Rroxscaffold_1G00002440 Rroxscaffold_3G00225880 Rroxscaffold_4G00299590 Rroxscaffold_7G00185090 |
| rosa_rugosa | Rorug03G0240800 Rorug04G0233800 Rorug05G0020300 Rorug05G0044200 Rorug05G0479100 Rorug06G0053500 Rorug07G0242200 |
| rosa_samantha | Rh2AG235100 Rh2BG257000 Rh4BG112100 Rh4CG280300 Rh5DG233000 Rh6AG271200 Rh6CG262100 |
| rosa_wichuraiana | Rw2G021950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 150 |
| AciI | CCGC | 1 cut(s) | 93 |
| AclWI | GGATC | 1 cut(s) | 127 |
| AcsI | RAATTY | 1 cut(s) | 76 |
| AdeI | CACNNNGTG | 1 cut(s) | 11 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AleI | CACNNNNGTG | 1 cut(s) | 108 |
| AluBI | AGCT | 1 cut(s) | 144 |
| AluI | AGCT | 1 cut(s) | 144 |
| Alw26I | GTCTC | 1 cut(s) | 93 |
| AlwI | GGATC | 1 cut(s) | 127 |
| ApoI | RAATTY | 1 cut(s) | 76 |
| AsuHPI | GGTGA | 2 cut(s) | 23, 122 |
| AsuII | TTCGAA | 1 cut(s) | 81 |
| BcoDI | GTCTC | 1 cut(s) | 93 |
| BglII | AGATCT | 1 cut(s) | 15 |
| BmcAI | AGTACT | 1 cut(s) | 59 |
| BmsI | GCATC | 1 cut(s) | 176 |
| Bpu14I | TTCGAA | 1 cut(s) | 81 |
| BsaBI | GATNNNNATC | 1 cut(s) | 190 |
| BsaI | GGTCTC | 1 cut(s) | 93 |
| Bse8I | GATNNNNATC | 1 cut(s) | 190 |
| BseJI | GATNNNNATC | 1 cut(s) | 190 |
| BseMII | CTCAG | 1 cut(s) | 33 |
| BseRI | GAGGAG | 2 cut(s) | 102, 111 |
| BsmAI | GTCTC | 1 cut(s) | 93 |
| Bso31I | GGTCTC | 1 cut(s) | 93 |
| Bsp119I | TTCGAA | 1 cut(s) | 81 |
| Bsp143I | GATC | 2 cut(s) | 15, 132 |
| BspACI | CCGC | 1 cut(s) | 93 |
| BspCNI | CTCAG | 1 cut(s) | 32 |
| BspPI | GGATC | 1 cut(s) | 127 |
| BspT104I | TTCGAA | 1 cut(s) | 81 |
| BspTNI | GGTCTC | 1 cut(s) | 93 |
| BssMI | GATC | 2 cut(s) | 15, 132 |
| Bst4CI | ACNGT | 1 cut(s) | 107 |
| BstBI | TTCGAA | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 19 |
| BstKTI | GATC | 2 cut(s) | 18, 135 |
| BstMAI | GTCTC | 1 cut(s) | 93 |
| BstMBI | GATC | 2 cut(s) | 15, 132 |
| BstX2I | RGATCY | 1 cut(s) | 15 |
| BstYI | RGATCY | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 1 cut(s) | 112 |
| CseI | GACGC | 1 cut(s) | 39 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviAII | CATG | 1 cut(s) | 8 |
| CviJI | RGCY | 1 cut(s) | 144 |
| CviKI_1 | RGCY | 1 cut(s) | 144 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 1 cut(s) | 19 |
| DpnI | GATC | 2 cut(s) | 17, 134 |
| DpnII | GATC | 2 cut(s) | 15, 132 |
| DraIII | CACNNNGTG | 1 cut(s) | 11 |
| EciI | GGCGGA | 1 cut(s) | 108 |
| Eco31I | GGTCTC | 1 cut(s) | 93 |
| FaeI | CATG | 1 cut(s) | 11 |
| FaiI | YATR | 1 cut(s) | 9 |
| FatI | CATG | 1 cut(s) | 7 |
| FblI | GTMKAC | 1 cut(s) | 150 |
| HgaI | GACGC | 1 cut(s) | 39 |
| Hin1II | CATG | 1 cut(s) | 11 |
| HincII | GTYRAC | 1 cut(s) | 70 |
| HindII | GTYRAC | 1 cut(s) | 70 |
| HinfI | GANTC | 1 cut(s) | 191 |
| HphI | GGTGA | 2 cut(s) | 23, 122 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 151 |
| Hpy188III | TCNNGA | 1 cut(s) | 183 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 151 |
| Hpy99I | CGWCG | 1 cut(s) | 55 |
| HpyAV | CCTTC | 1 cut(s) | 210 |
| HpyCH4III | ACNGT | 1 cut(s) | 107 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyF3I | CTNAG | 1 cut(s) | 19 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Hsp92II | CATG | 1 cut(s) | 11 |
| Kzo9I | GATC | 2 cut(s) | 15, 132 |
| LpnPI | CCDG | 1 cut(s) | 6 |
| LweI | GCATC | 1 cut(s) | 176 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MaeIII | GTNAC | 2 cut(s) | 3, 166 |
| MalI | GATC | 2 cut(s) | 17, 134 |
| MboI | GATC | 2 cut(s) | 15, 132 |
| MboII | GAAGA | 1 cut(s) | 195 |
| MflI | RGATCY | 1 cut(s) | 15 |
| MluCI | AATT | 1 cut(s) | 76 |
| MnlI | CCTC | 4 cut(s) | 58, 80, 83, 89 |
| MseI | TTAA | 1 cut(s) | 39 |
| MslI | CAYNNNNRTG | 1 cut(s) | 108 |
| NdeII | GATC | 2 cut(s) | 15, 132 |
| NlaIII | CATG | 1 cut(s) | 11 |
| NmuCI | GTSAC | 2 cut(s) | 3, 166 |
| NspV | TTCGAA | 1 cut(s) | 81 |
| OliI | CACNNNNGTG | 1 cut(s) | 108 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 78 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| PsuI | RGATCY | 1 cut(s) | 15 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| Sau3AI | GATC | 2 cut(s) | 15, 132 |
| ScaI | AGTACT | 1 cut(s) | 59 |
| SetI | ASST | 4 cut(s) | 69, 146, 150, 163 |
| SfaNI | GCATC | 1 cut(s) | 176 |
| SfuI | TTCGAA | 1 cut(s) | 81 |
| SgeI | CNNG | 6 cut(s) | 20, 33, 46, 166, 170, 195 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 108 |
| Sse9I | AATT | 1 cut(s) | 76 |
| SsiI | CCGC | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 107 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TaqI | TCGA | 3 cut(s) | 53, 81, 184 |
| TasI | AATT | 1 cut(s) | 76 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TseFI | GTSAC | 2 cut(s) | 3, 166 |
| Tsp45I | GTSAC | 2 cut(s) | 3, 166 |
| TspDTI | ATGAA | 1 cut(s) | 195 |
| TspRI | CASTG | 1 cut(s) | 112 |
| XapI | RAATTY | 1 cut(s) | 76 |
| XmiI | GTMKAC | 1 cut(s) | 150 |
| ZrmI | AGTACT | 1 cut(s) | 59 |