Rh5BG186700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
20497753 .. 20499228
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG186700.1

Sequence Viewer

Length: 165 bp
ATGGGTTGCTTCAGACCATCCTTGTCAGGAGGAAGGATTTGCTGGAACAAGGCGTCATGTGGGTGCCCCATGCTTATTGAGGAAGAACTTGAAAATCTCAGTCTACATCCAAGCTGTGCTCCAGCATCAGAGGAGGGGCAACCTAAGGACATATTCGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

5.88

Weight (kDa)

4.58

Isoelectric Point (pI)

90.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 63
AccI GTMKAC 1 cut(s) 103
AcyI GRCGYC 1 cut(s) 53
AgsI TTSAA 1 cut(s) 92
AluBI AGCT 1 cut(s) 114
AluI AGCT 1 cut(s) 114
Alw21I GWGCWC 1 cut(s) 121
AxyI CCTNAGG 1 cut(s) 144
BaeGI GKGCMC 1 cut(s) 68
BanI GGYRCC 1 cut(s) 63
Bbv12I GWGCWC 1 cut(s) 121
BccI CCATC 1 cut(s) 25
BmiI GGNNCC 1 cut(s) 65
BmsI GCATC 1 cut(s) 134
BpmI CTGGAG 1 cut(s) 105
BsaHI GRCGYC 1 cut(s) 53
Bse21I CCTNAGG 1 cut(s) 144
BseGI GGATG 2 cut(s) 17, 106
BseMII CTCAG 1 cut(s) 112
BseRI GAGGAG 1 cut(s) 146
BseSI GKGCMC 1 cut(s) 68
BshNI GGYRCC 1 cut(s) 63
BsiHKAI GWGCWC 1 cut(s) 121
Bsp1286I GDGCHC 2 cut(s) 68, 121
BspCNI CTCAG 1 cut(s) 111
BspLI GGNNCC 1 cut(s) 65
BspT107I GGYRCC 1 cut(s) 63
BssNI GRCGYC 1 cut(s) 53
BstACI GRCGYC 1 cut(s) 53
BstDEI CTNAG 2 cut(s) 98, 144
BstF5I GGATG 2 cut(s) 17, 106
BstSLI GKGCMC 1 cut(s) 68
Bsu36I CCTNAGG 1 cut(s) 144
BtsCI GGATG 2 cut(s) 17, 106
CseI GACGC 1 cut(s) 42
CviAII CATG 2 cut(s) 57, 70
CviJI RGCY 1 cut(s) 114
CviKI_1 RGCY 1 cut(s) 114
DdeI CTNAG 2 cut(s) 98, 144
Eco81I CCTNAGG 1 cut(s) 144
FaeI CATG 2 cut(s) 60, 73
FaiI YATR 3 cut(s) 58, 71, 152
FatI CATG 2 cut(s) 56, 69
FblI GTMKAC 1 cut(s) 103
FokI GGATG 2 cut(s) 4, 93
GsuI CTGGAG 1 cut(s) 105
HgaI GACGC 1 cut(s) 42
Hin1I GRCGYC 1 cut(s) 53
Hin1II CATG 2 cut(s) 60, 73
Hpy166II GTNNAC 1 cut(s) 104
Hpy188I TCNGA 2 cut(s) 14, 130
Hpy188III TCNNGA 1 cut(s) 27
Hpy8I GTNNAC 1 cut(s) 104
HpyAV CCTTC 1 cut(s) 27
HpyF3I CTNAG 2 cut(s) 98, 144
Hsp92I GRCGYC 1 cut(s) 53
Hsp92II CATG 2 cut(s) 60, 73
LmnI GCTCC 1 cut(s) 124
LpnPI CCDG 3 cut(s) 12, 28, 135
LweI GCATC 1 cut(s) 134
MboII GAAGA 1 cut(s) 95
MhlI GDGCHC 2 cut(s) 68, 121
MnlI CCTC 4 cut(s) 23, 73, 124, 127
MslI CAYNNNNRTG 1 cut(s) 61
NlaIII CATG 2 cut(s) 60, 73
NlaIV GGNNCC 1 cut(s) 65
PspN4I GGNNCC 1 cut(s) 65
RseI CAYNNNNRTG 1 cut(s) 61
SduI GDGCHC 2 cut(s) 68, 121
SetI ASST 2 cut(s) 116, 145
SfaNI GCATC 1 cut(s) 134
SgeI CNNG 9 cut(s) 34, 39, 55, 61, 69, 82, 101, 123, 134
SmiMI CAYNNNNRTG 1 cut(s) 61
TaqI TCGA 1 cut(s) 156
XmiI GTMKAC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.