Rh6AG460100

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0003090
Physical Location & Seq
Forward (+)
64281291 .. 64281764
474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG460100.1

Sequence Viewer

Length: 474 bp
ATGAAAGAAGGCTTTGTATTATGCAAGGATGTGTCTCTTCCTGAAACAAACGTTCATGTCAAAAATCCTCTAAGAAATCTAGGCAGCAACCGTCCTTCTGAGAGGTCGATACTTGCTTTCTTTGCTGGAAAGATGCATGGTTATGTTTGGCCGATTGTGCTACAGCATTGGGAAAACAAAGATCCCGACATGAAAATTTTTGGTCGATTACCTAGGGGAAAAGGCAACAAGAACTATGTGCACCATATGAAAAGCAGCAAGTACTGCATTTGTGCAAAAGGTTATGAAGTCAACAGTCCAAGAGTGGTAGAGGCCATTTTCTACGAGTGTGTTCCAATGATTATATCAGACAATTTTGTGCCTCCATTTTTCGAAGTTCTCAATTGGGAGTCGTTTGCTGTTTTCGTCTTGGAGAAAGATATTCCGAATTTGAAGAAGATATTGCTTGCAATCCCAGAGAAGAGATATCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

157

Amino Acids

18.2

Weight (kDa)

9.16

Isoelectric Point (pI)

38.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 3 - 148 3.4e-35 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 51
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 149
AcsI RAATTY 2 cut(s) 195, 427
AfaI GTAC 1 cut(s) 263
AgsI TTSAA 1 cut(s) 433
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 1 cut(s) 39
Alw44I GTGCAC 1 cut(s) 239
AlwI GGATC 1 cut(s) 176
AoxI GGCC 2 cut(s) 149, 312
ApaLI GTGCAC 1 cut(s) 239
ApeKI GCWGC 2 cut(s) 84, 255
ApoI RAATTY 2 cut(s) 195, 427
AspA2I CCTAGG 1 cut(s) 212
AsuII TTCGAA 1 cut(s) 372
AvrII CCTAGG 1 cut(s) 212
BaeGI GKGCMC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 2 cut(s) 96, 267
BcoDI GTCTC 1 cut(s) 39
BfaI CTAG 2 cut(s) 80, 213
BfmI CTRYAG 2 cut(s) 161, 470
BisI GCNGC 2 cut(s) 85, 256
BlnI CCTAGG 1 cut(s) 212
BlsI GCNGC 2 cut(s) 86, 257
BmcAI AGTACT 1 cut(s) 263
BmsI GCATC 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 372
BsaJI CCNNGG 1 cut(s) 212
BseDI CCNNGG 1 cut(s) 212
BseGI GGATG 1 cut(s) 34
BseMII CTCAG 1 cut(s) 90
BseSI GKGCMC 1 cut(s) 243
BseXI GCAGC 2 cut(s) 96, 267
BshFI GGCC 2 cut(s) 151, 314
BsiHKAI GWGCWC 1 cut(s) 243
BsmAI GTCTC 1 cut(s) 39
BsnI GGCC 2 cut(s) 151, 314
Bsp119I TTCGAA 1 cut(s) 372
Bsp1286I GDGCHC 1 cut(s) 243
Bsp143I GATC 1 cut(s) 181
BspANI GGCC 2 cut(s) 151, 314
BspCNI CTCAG 1 cut(s) 91
BspPI GGATC 1 cut(s) 176
BspT104I TTCGAA 1 cut(s) 372
BssECI CCNNGG 1 cut(s) 212
BssMI GATC 1 cut(s) 181
BssT1I CCWWGG 1 cut(s) 212
Bst4CI ACNGT 2 cut(s) 92, 296
Bst6I CTCTTC 2 cut(s) 42, 455
BstAPI GCANNNNNTGC 1 cut(s) 264
BstBI TTCGAA 1 cut(s) 372
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 2 cut(s) 71, 99
BstF5I GGATG 1 cut(s) 34
BstKTI GATC 1 cut(s) 184
BstMAI GTCTC 1 cut(s) 39
BstMBI GATC 1 cut(s) 181
BstMWI GCNNNNNNNGC 3 cut(s) 122, 157, 264
BstSFI CTRYAG 2 cut(s) 161, 470
BstSLI GKGCMC 1 cut(s) 243
BstV1I GCAGC 2 cut(s) 96, 267
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
BsuRI GGCC 2 cut(s) 151, 314
BtsCI GGATG 1 cut(s) 34
Cac8I GCNNGC 1 cut(s) 447
Csp6I GTAC 1 cut(s) 262
CviAII CATG 3 cut(s) 56, 137, 190
CviJI RGCY 3 cut(s) 12, 151, 314
CviKI_1 RGCY 3 cut(s) 12, 151, 314
CviQI GTAC 1 cut(s) 262
DdeI CTNAG 2 cut(s) 71, 99
DpnI GATC 1 cut(s) 183
DpnII GATC 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 149
Eam1104I CTCTTC 2 cut(s) 42, 455
EarI CTCTTC 2 cut(s) 42, 455
Eco130I CCWWGG 1 cut(s) 212
Eco32I GATATC 1 cut(s) 467
EcoRV GATATC 1 cut(s) 467
EcoT14I CCWWGG 1 cut(s) 212
EcoT22I ATGCAT 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 212
FaeI CATG 3 cut(s) 59, 140, 193
FatI CATG 3 cut(s) 55, 136, 189
FauNDI CATATG 1 cut(s) 246
Fnu4HI GCNGC 2 cut(s) 85, 256
FokI GGATG 1 cut(s) 41
Fsp4HI GCNGC 2 cut(s) 85, 256
FspBI CTAG 2 cut(s) 80, 213
GluI GCNGC 2 cut(s) 85, 256
HaeIII GGCC 2 cut(s) 151, 314
Hin1II CATG 3 cut(s) 59, 140, 193
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 1 cut(s) 389
Hpy166II GTNNAC 2 cut(s) 241, 292
Hpy188I TCNGA 3 cut(s) 100, 349, 426
Hpy188III TCNNGA 2 cut(s) 41, 185
Hpy8I GTNNAC 2 cut(s) 241, 292
HpyAV CCTTC 1 cut(s) 105
HpyCH4III ACNGT 2 cut(s) 92, 296
HpyCH4IV ACGT 1 cut(s) 51
HpyCH4V TGCA 6 cut(s) 24, 136, 241, 267, 275, 449
HpyF10VI GCNNNNNNNGC 3 cut(s) 122, 157, 264
HpyF3I CTNAG 2 cut(s) 71, 99
HpySE526I ACGT 1 cut(s) 51
Hsp92II CATG 3 cut(s) 59, 140, 193
Kzo9I GATC 1 cut(s) 181
LpnPI CCDG 3 cut(s) 54, 111, 468
Lsp1109I GCAGC 2 cut(s) 96, 267
LweI GCATC 1 cut(s) 123
MaeI CTAG 2 cut(s) 80, 213
MaeII ACGT 1 cut(s) 51
MalI GATC 1 cut(s) 183
MboI GATC 1 cut(s) 181
MboII GAAGA 4 cut(s) 29, 445, 448, 472
MfeI CAATTG 1 cut(s) 382
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 4 cut(s) 195, 352, 382, 427
MlyI GAGTC 1 cut(s) 398
MnlI CCTC 4 cut(s) 78, 96, 304, 372
Mph1103I ATGCAT 1 cut(s) 138
MslI CAYNNNNRTG 1 cut(s) 141
MunI CAATTG 1 cut(s) 382
MwoI GCNNNNNNNGC 3 cut(s) 122, 157, 264
NdeI CATATG 1 cut(s) 246
NdeII GATC 1 cut(s) 181
NlaIII CATG 3 cut(s) 59, 140, 193
NsiI ATGCAT 1 cut(s) 138
NspV TTCGAA 1 cut(s) 372
PkrI GCNGC 2 cut(s) 86, 257
PleI GAGTC 1 cut(s) 397
PpsI GAGTC 1 cut(s) 397
Psp1406I AACGTT 1 cut(s) 51
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
RseI CAYNNNNRTG 1 cut(s) 141
SatI GCNGC 2 cut(s) 85, 256
Sau3AI GATC 1 cut(s) 181
ScaI AGTACT 1 cut(s) 263
SchI GAGTC 1 cut(s) 398
SduI GDGCHC 1 cut(s) 243
SetI ASST 4 cut(s) 54, 107, 214, 283
SfaNI GCATC 1 cut(s) 123
SfcI CTRYAG 2 cut(s) 161, 470
SfuI TTCGAA 1 cut(s) 372
SmiMI CAYNNNNRTG 1 cut(s) 141
Sse9I AATT 4 cut(s) 195, 352, 382, 427
SspMI CTAG 2 cut(s) 80, 213
StyI CCWWGG 1 cut(s) 212
TaaI ACNGT 2 cut(s) 92, 296
TaiI ACGT 1 cut(s) 54
TaqI TCGA 3 cut(s) 107, 205, 372
TasI AATT 4 cut(s) 195, 352, 382, 427
TatI WGTACW 1 cut(s) 261
TseI GCWGC 2 cut(s) 84, 255
TspDTI ATGAA 5 cut(s) 17, 44, 206, 263, 300
VneI GTGCAC 1 cut(s) 239
XapI RAATTY 2 cut(s) 195, 427
XmaJI CCTAGG 1 cut(s) 212
XspI CTAG 2 cut(s) 80, 213
ZrmI AGTACT 1 cut(s) 263
Zsp2I ATGCAT 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.