Domain of unknown function (DUF4218)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001438.1_g000056 Rmu_sc0001499.1_g000048 Rmu_sc0002784.1_g000045 |
| rosa_roxburghii | Rroxscaffold_1G00058890 |
| rosa_samantha | Rh1AG098200 Rh1CG232700 Rh2CG239500 Rh4AG198500 Rh4AG416400 Rh4BG427700 Rh4CG442600 Rh4DG423500 Rh5AG490000 Rh5AG490100 Rh6BG053000 Rh6BG053100 Rh6DG120700 Rh7CG255800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 34 |
| Acc36I | ACCTGC | 1 cut(s) | 34 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcsI | RAATTY | 2 cut(s) | 14, 130 |
| AjnI | CCWGG | 1 cut(s) | 53 |
| AluBI | AGCT | 1 cut(s) | 253 |
| AluI | AGCT | 1 cut(s) | 253 |
| AlwI | GGATC | 1 cut(s) | 185 |
| AoxI | GGCC | 2 cut(s) | 4, 51 |
| ApoI | RAATTY | 2 cut(s) | 14, 130 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 2 cut(s) | 15, 218 |
| BbsI | GAAGAC | 1 cut(s) | 216 |
| BciT130I | CCWGG | 1 cut(s) | 55 |
| BclI | TGATCA | 1 cut(s) | 241 |
| BfuAI | ACCTGC | 1 cut(s) | 34 |
| Bme1390I | CCNGG | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmrFI | CCNGG | 1 cut(s) | 55 |
| BpiI | GAAGAC | 1 cut(s) | 216 |
| BseBI | CCWGG | 1 cut(s) | 55 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BsgI | GTGCAG | 1 cut(s) | 12 |
| BshFI | GGCC | 2 cut(s) | 6, 53 |
| BsnI | GGCC | 2 cut(s) | 6, 53 |
| Bsp143I | GATC | 2 cut(s) | 190, 241 |
| BspANI | GGCC | 2 cut(s) | 6, 53 |
| BspMI | ACCTGC | 1 cut(s) | 34 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BssMI | GATC | 2 cut(s) | 190, 241 |
| Bst2UI | CCWGG | 1 cut(s) | 55 |
| BstDEI | CTNAG | 1 cut(s) | 125 |
| BstKTI | GATC | 2 cut(s) | 193, 244 |
| BstMBI | GATC | 2 cut(s) | 190, 241 |
| BstNI | CCWGG | 1 cut(s) | 55 |
| BstSCI | CCNGG | 1 cut(s) | 53 |
| BstV2I | GAAGAC | 1 cut(s) | 216 |
| BsuRI | GGCC | 2 cut(s) | 6, 53 |
| BveI | ACCTGC | 1 cut(s) | 34 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 77 |
| CviJI | RGCY | 4 cut(s) | 6, 53, 88, 253 |
| CviKI_1 | RGCY | 4 cut(s) | 6, 53, 88, 253 |
| DdeI | CTNAG | 1 cut(s) | 125 |
| DpnI | GATC | 2 cut(s) | 192, 243 |
| DpnII | GATC | 2 cut(s) | 190, 241 |
| Eco147I | AGGCCT | 1 cut(s) | 53 |
| EcoRII | CCWGG | 1 cut(s) | 53 |
| FaeI | CATG | 1 cut(s) | 80 |
| FaiI | YATR | 5 cut(s) | 9, 37, 78, 196, 237 |
| FatI | CATG | 1 cut(s) | 76 |
| FbaI | TGATCA | 1 cut(s) | 241 |
| HaeIII | GGCC | 2 cut(s) | 6, 53 |
| Hin1II | CATG | 1 cut(s) | 80 |
| HinfI | GANTC | 1 cut(s) | 93 |
| HphI | GGTGA | 2 cut(s) | 15, 218 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| Hpy188III | TCNNGA | 3 cut(s) | 97, 245, 258 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 125 |
| Hsp92II | CATG | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 1 cut(s) | 241 |
| Kzo9I | GATC | 2 cut(s) | 190, 241 |
| LmnI | GCTCC | 1 cut(s) | 250 |
| LpnPI | CCDG | 5 cut(s) | 39, 40, 67, 87, 230 |
| MaeIII | GTNAC | 2 cut(s) | 21, 158 |
| MalI | GATC | 2 cut(s) | 192, 243 |
| MboI | GATC | 2 cut(s) | 190, 241 |
| MboII | GAAGA | 1 cut(s) | 221 |
| MluCI | AATT | 3 cut(s) | 14, 130, 274 |
| MmeI | TCCRAC | 1 cut(s) | 86 |
| MnlI | CCTC | 1 cut(s) | 241 |
| MseI | TTAA | 1 cut(s) | 225 |
| MspR9I | CCNGG | 1 cut(s) | 55 |
| MvaI | CCWGG | 1 cut(s) | 55 |
| NdeII | GATC | 2 cut(s) | 190, 241 |
| NlaIII | CATG | 1 cut(s) | 80 |
| NmuCI | GTSAC | 1 cut(s) | 21 |
| PaqCI | CACCTGC | 1 cut(s) | 34 |
| PceI | AGGCCT | 1 cut(s) | 53 |
| PfeI | GAWTC | 1 cut(s) | 93 |
| Psp6I | CCWGG | 1 cut(s) | 53 |
| PspGI | CCWGG | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| Sau3AI | GATC | 2 cut(s) | 190, 241 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 55 |
| SetI | ASST | 4 cut(s) | 28, 106, 157, 255 |
| Sse9I | AATT | 3 cut(s) | 14, 130, 274 |
| SseBI | AGGCCT | 1 cut(s) | 53 |
| SspI | AATATT | 1 cut(s) | 112 |
| StuI | AGGCCT | 1 cut(s) | 53 |
| StyD4I | CCNGG | 1 cut(s) | 53 |
| TasI | AATT | 3 cut(s) | 14, 130, 274 |
| TfiI | GAWTC | 1 cut(s) | 93 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TseFI | GTSAC | 1 cut(s) | 21 |
| Tsp45I | GTSAC | 1 cut(s) | 21 |
| TspDTI | ATGAA | 1 cut(s) | 24 |
| XapI | RAATTY | 2 cut(s) | 14, 130 |