Rh6CG044300

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0002263
Physical Location & Seq
Forward (+)
4337785 .. 4340532
2748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG044300.1

Sequence Viewer

Length: 1392 bp
ATGAACTGGGTATGTTTGCATTTGCTTTTTGTTTTGGTTTTCTCTGCAAGTTCAGTTCTTTGTGGTACATTGGTCAAGTCTATTCCGGGGTTCGATGGTGATCTTCCCTTTAAGCTTTACACTGGTTATGTCAGTGTGGGTAAATCAGAGATGTTTTACTACTTCATCGAGTCAGAAGGAAACCCCAAAGAAGATCCTTTGTTGTTGTGGTATAGTGGAGGCCCTGGTTGTTCTGTTCTCAATGGTCTCATTTACGAAAATGGTCCTATGGTTTTCAATTATACAGCTTATGAAGGAGGGTTACCATCTACATATTACTACCCATACTCATGGACAAGGACTGCAAGTGTATTGTTTGTGGATGCACCTGTTGGCACTGGTTTCTCCTATGCAACTAGTGCAGATGAATTCCCTTCTTCAGATTTAAAAACAGCAGCACAGGTTTATGGATTTTTGAGGGAGTGGTTGGAAGAGCACCCACAATTTCTCAAAGTTCAGCTATTTATTGGGGCTGACTCATATTCAGGCCTGACGGGCACCATCGTTGTCAAATACATAATAGATGACAATGATGCTGGAGTACTGCCACGACTCAACCTCAAGGGGTATGTTCTAGGATGTCCAACTACTGATCAAACTCTCAATGAGAATTCAAGGTATGTTTATTCTCATCGAATGGGGCTTATATCAGATGAACTCTACGAGGCAGCTAAAGAAAGCTGCAATTCAAGCTTCTATGGTGCTACCACGTCAGAGCCAGAATGCTATGAGGACGTTCAATTGATGGCAAAGCAAATTAAAGACATAAACAAACTCTGCATTCTAGAGCCAAAGTGCACGTGGGCTTCCCCAGACCAAGATGGAGAAACAGCTCGTAGATATTTACATGAAAATCCCGAAGAATTCATCCGGTCACTTCCAAAAGATCCTGAATACTACTGTCGAAACTTTAATTATATGCTGGCTTATGTATGGGCAAACGATGAAGGTGTAAGAAAGGCACTTAATGTCCGAGAGGGAACAGTACTAGATTGGAAGAGATGCAATAAAAGTTTGTCATACACAGAAGATGTGGAAAGTGTCGTTGAGTATCATAAATACCTCAGTACCAAGGGATTACAAGTTCTGATATTCAATGGTGATCATGACCTTACAGTCCCAAACACCGGTACGGAACAGTGGATAAGAAGTTTGGATTTGCCTGTTGTCAATGATTGGAGACCGTGGCTAGTTGATGGTCAAATTGCTGGATACACTGTCAAGTATTCAAGTAATGAGGGATACCGTTTGACTTATGCAACTGTAAAGGGTGCTGGGCACTCAGCTCCAGAATACAAGCGTAGGGAATGTTATATCATGTTTGATAGGTTCATCCATTACTATCCTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

463

Amino Acids

52.7

Weight (kDa)

4.95

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 29 - 459 4.3e-113 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1154
AccB1I GGYRCC 1 cut(s) 536
AclWI GGATC 2 cut(s) 188, 920
AcsI RAATTY 3 cut(s) 407, 649, 902
AcuI CTGAAG 1 cut(s) 402
AcvI CACGTG 1 cut(s) 840
AfaI GTAC 5 cut(s) 67, 582, 1026, 1108, 1171
AfiI CCNNNNNNNGG 1 cut(s) 1166
AgeI ACCGGT 1 cut(s) 1166
AgsI TTSAA 6 cut(s) 277, 654, 729, 779, 1135, 1269
AhlI ACTAGT 1 cut(s) 395
AjiI CACGTC 1 cut(s) 750
AjnI CCWGG 1 cut(s) 223
AloI GAACNNNNNNTCC 2 cut(s) 1107, 1139
AluBI AGCT 8 cut(s) 115, 287, 499, 710, 720, 732, 872, 1325
AluI AGCT 8 cut(s) 115, 287, 499, 710, 720, 732, 872, 1325
Alw21I GWGCWC 2 cut(s) 477, 839
Alw26I GTCTC 2 cut(s) 251, 1213
Alw44I GTGCAC 1 cut(s) 835
AlwI GGATC 2 cut(s) 188, 920
AoxI GGCC 2 cut(s) 220, 526
ApaLI GTGCAC 1 cut(s) 835
ApeKI GCWGC 3 cut(s) 434, 707, 720
ApoI RAATTY 3 cut(s) 407, 649, 902
AsiGI ACCGGT 1 cut(s) 1166
AspS9I GGNCC 2 cut(s) 221, 263
AsuC2I CCSGG 1 cut(s) 87
AsuHPI GGTGA 2 cut(s) 110, 1151
AvaII GGWCC 1 cut(s) 263
BaeGI GKGCMC 3 cut(s) 539, 839, 1320
BaeI ACNNNNGTAYC 4 cut(s) 57, 90, 1090, 1123
BanI GGYRCC 1 cut(s) 536
BarI GAAGNNNNNNTAC 2 cut(s) 285, 317
BbrPI CACGTG 1 cut(s) 840
Bbv12I GWGCWC 2 cut(s) 477, 839
BbvI GCAGC 3 cut(s) 446, 707, 719
BccI CCATC 6 cut(s) 89, 313, 548, 778, 854, 1229
BciT130I CCWGG 1 cut(s) 225
BciVI GTATCC 2 cut(s) 1244, 1274
BclI TGATCA 2 cut(s) 631, 1141
BcnI CCSGG 1 cut(s) 87
BcoDI GTCTC 2 cut(s) 251, 1213
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 5 cut(s) 396, 614, 824, 1028, 1229
BfuI GTATCC 2 cut(s) 1244, 1274
BglI GCCNNNNNGGC 1 cut(s) 534
BisI GCNGC 3 cut(s) 435, 708, 721
BlsI GCNGC 3 cut(s) 436, 709, 722
BmcAI AGTACT 2 cut(s) 582, 1026
Bme1390I CCNGG 2 cut(s) 87, 225
Bme18I GGWCC 1 cut(s) 263
BmgBI CACGTC 1 cut(s) 750
BmgT120I GGNCC 2 cut(s) 221, 263
BmiI GGNNCC 1 cut(s) 538
BmrFI CCNGG 2 cut(s) 87, 225
BmrI ACTGGG 1 cut(s) 16
BmsI GCATC 3 cut(s) 352, 562, 1031
BmuI ACTGGG 1 cut(s) 16
BpmI CTGGAG 2 cut(s) 597, 1311
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 1 cut(s) 87
BsaAI YACGTR 1 cut(s) 840
BsaBI GATNNNNATC 1 cut(s) 99
BsaI GGTCTC 2 cut(s) 251, 1213
BsaJI CCNNGG 4 cut(s) 86, 223, 1110, 1223
BsaWI WCCGGW 2 cut(s) 909, 1166
Bsc4I CCNNNNNNNGG 1 cut(s) 1166
Bse118I RCCGGY 1 cut(s) 1166
Bse1I ACTGG 3 cut(s) 11, 127, 382
Bse8I GATNNNNATC 1 cut(s) 99
BseBI CCWGG 1 cut(s) 225
BseDI CCNNGG 4 cut(s) 86, 223, 1110, 1223
BseGI GGATG 4 cut(s) 367, 623, 906, 1371
BseJI GATNNNNATC 1 cut(s) 99
BseLI CCNNNNNNNGG 1 cut(s) 1166
BseMII CTCAG 2 cut(s) 1117, 1335
BseNI ACTGG 3 cut(s) 11, 127, 382
BseSI GKGCMC 3 cut(s) 539, 839, 1320
BseXI GCAGC 3 cut(s) 446, 707, 719
BseYI CCCAGC 1 cut(s) 1313
BsgI GTGCAG 1 cut(s) 420
BshFI GGCC 2 cut(s) 222, 528
BshNI GGYRCC 1 cut(s) 536
BshTI ACCGGT 1 cut(s) 1166
BsiHKAI GWGCWC 2 cut(s) 477, 839
BsiSI CCGG 3 cut(s) 86, 910, 1167
BslFI GGGAC 1 cut(s) 1142
BslI CCNNNNNNNGG 1 cut(s) 1166
BsmAI GTCTC 2 cut(s) 251, 1213
BsmFI GGGAC 1 cut(s) 1142
BsmI GAATGC 2 cut(s) 767, 819
BsnI GGCC 2 cut(s) 222, 528
Bso31I GGTCTC 2 cut(s) 251, 1213
Bsp1286I GDGCHC 4 cut(s) 477, 539, 839, 1320
Bsp143I GATC 5 cut(s) 100, 193, 631, 925, 1141
BspANI GGCC 2 cut(s) 222, 528
BspCNI CTCAG 2 cut(s) 1116, 1334
BspHI TCATGA 1 cut(s) 1144
BspLI GGNNCC 1 cut(s) 538
BspPI GGATC 2 cut(s) 188, 920
BspQI GCTCTTC 1 cut(s) 465
BspT107I GGYRCC 1 cut(s) 536
BspTNI GGTCTC 2 cut(s) 251, 1213
BsrFI RCCGGY 1 cut(s) 1166
BsrI ACTGG 3 cut(s) 11, 127, 382
BssAI RCCGGY 1 cut(s) 1166
BssECI CCNNGG 4 cut(s) 86, 223, 1110, 1223
BssMI GATC 5 cut(s) 100, 193, 631, 925, 1141
BssT1I CCWWGG 1 cut(s) 1110
Bst2UI CCWGG 1 cut(s) 225
Bst4CI ACNGT 8 cut(s) 941, 1024, 1156, 1179, 1224, 1258, 1286, 1303
Bst6I CTCTTC 2 cut(s) 465, 1031
BstAPI GCANNNNNTGC 1 cut(s) 398
BstBAI YACGTR 1 cut(s) 840
BstC8I GCNNGC 1 cut(s) 963
BstDEI CTNAG 2 cut(s) 1103, 1321
BstDSI CCRYGG 1 cut(s) 1223
BstEII GGTNACC 1 cut(s) 300
BstF5I GGATG 4 cut(s) 367, 623, 906, 1371
BstKTI GATC 5 cut(s) 103, 196, 634, 928, 1144
BstMAI GTCTC 2 cut(s) 251, 1213
BstMBI GATC 5 cut(s) 100, 193, 631, 925, 1141
BstMWI GCNNNNNNNGC 3 cut(s) 398, 534, 729
BstNI CCWGG 1 cut(s) 225
BstPI GGTNACC 1 cut(s) 300
BstSCI CCNGG 2 cut(s) 85, 223
BstSLI GKGCMC 3 cut(s) 539, 839, 1320
BstV1I GCAGC 3 cut(s) 446, 707, 719
BstX2I RGATCY 2 cut(s) 193, 925
BstXI CCANNNNNNTGG 1 cut(s) 330
BstYI RGATCY 2 cut(s) 193, 925
BsuI GTATCC 2 cut(s) 1244, 1274
BsuRI GGCC 2 cut(s) 222, 528
BtgI CCRYGG 1 cut(s) 1223
BtrI CACGTC 1 cut(s) 750
BtsCI GGATG 4 cut(s) 367, 623, 906, 1371
BtsIMutI CAGTG 5 cut(s) 120, 139, 375, 1184, 1254
Cac8I GCNNGC 1 cut(s) 963
CciI TCATGA 1 cut(s) 1144
Cfr10I RCCGGY 1 cut(s) 1166
Cfr13I GGNCC 2 cut(s) 221, 263
Csp6I GTAC 5 cut(s) 66, 581, 1025, 1107, 1170
CspAI ACCGGT 1 cut(s) 1166
CviAII CATG 4 cut(s) 330, 887, 1145, 1357
CviQI GTAC 5 cut(s) 66, 581, 1025, 1107, 1170
DdeI CTNAG 2 cut(s) 1103, 1321
DpnI GATC 5 cut(s) 102, 195, 633, 927, 1143
DpnII GATC 5 cut(s) 100, 193, 631, 925, 1141
DraI TTTAAA 1 cut(s) 426
DrdI GACNNNNNNGTC 1 cut(s) 1154
DseDI GACNNNNNNGTC 1 cut(s) 1154
Eam1104I CTCTTC 2 cut(s) 465, 1031
EarI CTCTTC 2 cut(s) 465, 1031
Eco130I CCWWGG 1 cut(s) 1110
Eco147I AGGCCT 1 cut(s) 528
Eco31I GGTCTC 2 cut(s) 251, 1213
Eco47I GGWCC 1 cut(s) 263
Eco57I CTGAAG 1 cut(s) 402
Eco72I CACGTG 1 cut(s) 840
Eco91I GGTNACC 1 cut(s) 300
EcoO109I RGGNCCY 1 cut(s) 221
EcoO65I GGTNACC 1 cut(s) 300
EcoRI GAATTC 3 cut(s) 407, 649, 902
EcoRII CCWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 1110
ErhI CCWWGG 1 cut(s) 1110
FaeI CATG 4 cut(s) 333, 890, 1148, 1360
FaqI GGGAC 1 cut(s) 1142
FatI CATG 4 cut(s) 329, 886, 1144, 1356
FbaI TGATCA 2 cut(s) 631, 1141
Fnu4HI GCNGC 3 cut(s) 435, 708, 721
FokI GGATG 4 cut(s) 374, 630, 893, 1358
Fsp4HI GCNGC 3 cut(s) 435, 708, 721
FspBI CTAG 5 cut(s) 396, 614, 824, 1028, 1229
GluI GCNGC 3 cut(s) 435, 708, 721
GsaI CCCAGC 1 cut(s) 1317
GsuI CTGGAG 2 cut(s) 597, 1311
HaeIII GGCC 2 cut(s) 222, 528
HapII CCGG 3 cut(s) 86, 910, 1167
Hin1II CATG 4 cut(s) 333, 890, 1148, 1360
HindIII AAGCTT 2 cut(s) 113, 730
HinfI GANTC 3 cut(s) 170, 515, 591
HpaII CCGG 3 cut(s) 86, 910, 1167
HphI GGTGA 2 cut(s) 110, 1151
Hpy166II GTNNAC 1 cut(s) 837
Hpy188I TCNGA 8 cut(s) 148, 175, 421, 691, 754, 1013, 1128, 1391
Hpy188III TCNNGA 5 cut(s) 824, 896, 929, 1145, 1328
Hpy8I GTNNAC 1 cut(s) 837
HpyAV CCTTC 4 cut(s) 170, 287, 423, 980
HpyCH4III ACNGT 8 cut(s) 941, 1024, 1156, 1179, 1224, 1258, 1286, 1303
HpyCH4IV ACGT 3 cut(s) 749, 774, 839
HpyF10VI GCNNNNNNNGC 3 cut(s) 398, 534, 729
HpyF3I CTNAG 2 cut(s) 1103, 1321
HpySE526I ACGT 3 cut(s) 749, 774, 839
Hsp92II CATG 4 cut(s) 333, 890, 1148, 1360
Ksp22I TGATCA 2 cut(s) 631, 1141
Kzo9I GATC 5 cut(s) 100, 193, 631, 925, 1141
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 1 cut(s) 1330
Lsp1109I GCAGC 3 cut(s) 446, 707, 719
LweI GCATC 3 cut(s) 352, 562, 1031
MaeI CTAG 5 cut(s) 396, 614, 824, 1028, 1229
MaeII ACGT 3 cut(s) 749, 774, 839
MaeIII GTNAC 2 cut(s) 300, 912
MalI GATC 5 cut(s) 102, 195, 633, 927, 1143
MboI GATC 5 cut(s) 100, 193, 631, 925, 1141
MboII GAAGA 7 cut(s) 95, 203, 408, 482, 911, 1048, 1079
MfeI CAATTG 1 cut(s) 779
MflI RGATCY 2 cut(s) 193, 925
MhlI GDGCHC 4 cut(s) 477, 539, 839, 1320
MlyI GAGTC 3 cut(s) 179, 509, 585
MmeI TCCRAC 2 cut(s) 447, 647
MnlI CCTC 9 cut(s) 212, 290, 450, 608, 697, 763, 1009, 1112, 1270
MseI TTAA 5 cut(s) 111, 425, 798, 951, 1005
MslI CAYNNNNRTG 1 cut(s) 328
MspI CCGG 3 cut(s) 86, 910, 1167
MspR9I CCNGG 2 cut(s) 87, 225
MunI CAATTG 1 cut(s) 779
Mva1269I GAATGC 2 cut(s) 767, 819
MvaI CCWGG 1 cut(s) 225
MwoI GCNNNNNNNGC 3 cut(s) 398, 534, 729
NciI CCSGG 1 cut(s) 87
NdeII GATC 5 cut(s) 100, 193, 631, 925, 1141
NlaIII CATG 4 cut(s) 333, 890, 1148, 1360
NlaIV GGNNCC 1 cut(s) 538
NmuCI GTSAC 1 cut(s) 912
PagI TCATGA 1 cut(s) 1144
PceI AGGCCT 1 cut(s) 528
PciSI GCTCTTC 1 cut(s) 465
PctI GAATGC 2 cut(s) 767, 819
PinAI ACCGGT 1 cut(s) 1166
PkrI GCNGC 3 cut(s) 436, 709, 722
PleI GAGTC 3 cut(s) 178, 509, 585
PmaCI CACGTG 1 cut(s) 840
PmlI CACGTG 1 cut(s) 840
PpsI GAGTC 3 cut(s) 178, 509, 585
Ppu21I YACGTR 1 cut(s) 840
Psp6I CCWGG 1 cut(s) 223
PspCI CACGTG 1 cut(s) 840
PspEI GGTNACC 1 cut(s) 300
PspFI CCCAGC 1 cut(s) 1313
PspGI CCWGG 1 cut(s) 223
PspN4I GGNNCC 1 cut(s) 538
PspPI GGNCC 2 cut(s) 221, 263
PsuI RGATCY 2 cut(s) 193, 925
RsaI GTAC 5 cut(s) 67, 582, 1026, 1108, 1171
RsaNI GTAC 5 cut(s) 66, 581, 1025, 1107, 1170
RseI CAYNNNNRTG 1 cut(s) 328
SapI GCTCTTC 1 cut(s) 465
SaqAI TTAA 5 cut(s) 111, 425, 798, 951, 1005
SatI GCNGC 3 cut(s) 435, 708, 721
Sau3AI GATC 5 cut(s) 100, 193, 631, 925, 1141
Sau96I GGNCC 2 cut(s) 221, 263
ScaI AGTACT 2 cut(s) 582, 1026
SchI GAGTC 3 cut(s) 179, 509, 585
ScrFI CCNGG 2 cut(s) 87, 225
SduI GDGCHC 4 cut(s) 477, 539, 839, 1320
SfaNI GCATC 3 cut(s) 352, 562, 1031
SinI GGWCC 1 cut(s) 263
SmiMI CAYNNNNRTG 1 cut(s) 328
SmlI CTYRAG 1 cut(s) 599
SmoI CTYRAG 1 cut(s) 599
SpeI ACTAGT 1 cut(s) 395
SseBI AGGCCT 1 cut(s) 528
SspMI CTAG 5 cut(s) 396, 614, 824, 1028, 1229
StuI AGGCCT 1 cut(s) 528
StyD4I CCNGG 2 cut(s) 85, 223
StyI CCWWGG 1 cut(s) 1110
TaaI ACNGT 8 cut(s) 941, 1024, 1156, 1179, 1224, 1258, 1286, 1303
TaiI ACGT 3 cut(s) 752, 777, 842
TaqI TCGA 4 cut(s) 93, 168, 673, 943
TatI WGTACW 2 cut(s) 580, 1024
Tru1I TTAA 5 cut(s) 111, 425, 798, 951, 1005
Tru9I TTAA 5 cut(s) 111, 425, 798, 951, 1005
TscAI CASTG 5 cut(s) 127, 139, 382, 1184, 1261
TseFI GTSAC 1 cut(s) 912
TseI GCWGC 3 cut(s) 434, 707, 720
Tsp45I GTSAC 1 cut(s) 912
TspDTI ATGAA 9 cut(s) 17, 154, 306, 420, 708, 895, 903, 999, 1360
TspGWI ACGGA 1 cut(s) 1187
TspRI CASTG 5 cut(s) 127, 139, 382, 1184, 1261
VneI GTGCAC 1 cut(s) 835
VpaK11BI GGWCC 1 cut(s) 263
XapI RAATTY 3 cut(s) 407, 649, 902
XbaI TCTAGA 1 cut(s) 823
XcmI CCANNNNNNNNNTGG 1 cut(s) 837
XspI CTAG 5 cut(s) 396, 614, 824, 1028, 1229
ZrmI AGTACT 2 cut(s) 582, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.