Rh7AG449300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
61413419 .. 61417624
4206 bp
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UTR
Exon/CDS
Intron
Rh7AG449300.1

Sequence Viewer

Length: 339 bp
ATGGGTGTAGGGGAGGCAGAGGTGGTGATGGAAGAGGTTGACAACGTAGCAAAAGTCGTAGAAAGAGTGGCAACTGTGGCTGAGAAGGTGTCAGCCGATGTAGCTGATAAACTTCCAACTAATCATAAAAGACTAAAAGAAATTGCTTTGCTGATTGAACGAGTATCCGAACTGGCTGCTCAAGATGCTCAACTAACACAAGATTTTATTCACAAGGTGGATGCACTGAAGCAAGACCTGGGAGACTTAAAGAAACTGGTGGAGCCAGTTGTTGATAAGATAGAGAACTATGAATTTCAAGGAAACTACTCTCCAGTTTCTACAAAAGAACAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

112

Amino Acids

12.43

Weight (kDa)

4.73

Isoelectric Point (pI)

32.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 293
AcuI CTGAAG 1 cut(s) 248
AdeI CACNNNGTG 1 cut(s) 217
AgsI TTSAA 2 cut(s) 158, 299
AjnI CCWGG 1 cut(s) 237
AluBI AGCT 1 cut(s) 104
AluI AGCT 1 cut(s) 104
Alw26I GTCTC 1 cut(s) 237
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 1 cut(s) 293
AsuHPI GGTGA 1 cut(s) 37
BbvI GCAGC 1 cut(s) 163
BccI CCATC 1 cut(s) 22
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 1 cut(s) 239
BciVI GTATCC 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 237
BfuI GTATCC 1 cut(s) 175
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
Bme1390I CCNGG 1 cut(s) 239
BmiI GGNNCC 1 cut(s) 264
BmrFI CCNGG 1 cut(s) 239
BmsI GCATC 2 cut(s) 175, 211
BpmI CTGGAG 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 165
BsaJI CCNNGG 1 cut(s) 238
Bse1I ACTGG 4 cut(s) 177, 261, 266, 314
BseBI CCWGG 1 cut(s) 239
BseDI CCNNGG 1 cut(s) 238
BseGI GGATG 1 cut(s) 226
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 4 cut(s) 177, 261, 266, 314
BseXI GCAGC 1 cut(s) 163
BsmAI GTCTC 1 cut(s) 237
BspCNI CTCAG 1 cut(s) 73
BspLI GGNNCC 1 cut(s) 264
BsrI ACTGG 4 cut(s) 177, 261, 266, 314
BssECI CCNNGG 1 cut(s) 238
Bst2UI CCWGG 1 cut(s) 239
Bst4CI ACNGT 1 cut(s) 76
Bst6I CTCTTC 1 cut(s) 27
BstDEI CTNAG 1 cut(s) 81
BstF5I GGATG 1 cut(s) 226
BstMAI GTCTC 1 cut(s) 237
BstMWI GCNNNNNNNGC 3 cut(s) 77, 101, 185
BstNI CCWGG 1 cut(s) 239
BstSCI CCNGG 1 cut(s) 237
BstV1I GCAGC 1 cut(s) 163
BsuI GTATCC 1 cut(s) 175
BtsCI GGATG 1 cut(s) 226
BtsIMutI CAGTG 1 cut(s) 224
CviJI RGCY 5 cut(s) 80, 95, 104, 176, 265
CviKI_1 RGCY 5 cut(s) 80, 95, 104, 176, 265
DdeI CTNAG 1 cut(s) 81
DraIII CACNNNGTG 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco57I CTGAAG 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 237
FaiI YATR 2 cut(s) 126, 291
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 1 cut(s) 233
Fsp4HI GCNGC 1 cut(s) 177
GluI GCNGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 297
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 1 cut(s) 40
Hpy188I TCNGA 1 cut(s) 169
Hpy188III TCNNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 40
HpyAV CCTTC 1 cut(s) 79
HpyCH4III ACNGT 1 cut(s) 76
HpyCH4IV ACGT 1 cut(s) 45
HpyCH4V TGCA 1 cut(s) 224
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 101, 185
HpyF3I CTNAG 1 cut(s) 81
HpySE526I ACGT 1 cut(s) 45
LmnI GCTCC 1 cut(s) 262
LpnPI CCDG 6 cut(s) 158, 224, 242, 251, 279, 327
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 2 cut(s) 175, 211
MaeII ACGT 1 cut(s) 45
MboII GAAGA 1 cut(s) 44
MluCI AATT 3 cut(s) 141, 293, 334
MmeI TCCRAC 1 cut(s) 140
MnlI CCTC 3 cut(s) 7, 13, 28
MseI TTAA 2 cut(s) 248, 337
MspR9I CCNGG 1 cut(s) 239
MvaI CCWGG 1 cut(s) 239
MwoI GCNNNNNNNGC 3 cut(s) 77, 101, 185
NlaIV GGNNCC 1 cut(s) 264
PkrI GCNGC 1 cut(s) 178
Psp6I CCWGG 1 cut(s) 237
PspGI CCWGG 1 cut(s) 237
PspN4I GGNNCC 1 cut(s) 264
SaqAI TTAA 2 cut(s) 248, 337
SatI GCNGC 1 cut(s) 177
ScrFI CCNGG 1 cut(s) 239
SetI ASST 7 cut(s) 24, 39, 48, 90, 106, 219, 240
SfaNI GCATC 2 cut(s) 175, 211
SmlI CTYRAG 1 cut(s) 180
SmoI CTYRAG 1 cut(s) 180
Sse9I AATT 3 cut(s) 141, 293, 334
StyD4I CCNGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 76
TaiI ACGT 1 cut(s) 48
TasI AATT 3 cut(s) 141, 293, 334
Tru1I TTAA 2 cut(s) 248, 337
Tru9I TTAA 2 cut(s) 248, 337
TscAI CASTG 1 cut(s) 231
TseI GCWGC 1 cut(s) 176
TspDTI ATGAA 1 cut(s) 306
TspRI CASTG 1 cut(s) 231
XapI RAATTY 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.