Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g18940 FvH4_6g18941 |
| malus_domestica | MD08G1069200.v1.1 MD08G1069300.v1.1 MD15G1052800.v1.1 |
| prunus_persica | Prupe.1G406700_v2.0.a1 |
| pyrus_communis | pycom08g05700 pycom08g05710 pycom15g05050 |
| rosa_chinensis | RchiOBHm_Chr6g0311521 |
| rosa_laevigata | RLG00000010397 |
| rosa_multiflora | Rmu_co8085934.1_g000001 Rmu_sc0028020.1_g000001 Rmu_sc0035116.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00157540 |
| rosa_rugosa | Rorug06G0389400 |
| rosa_samantha | Rh6AG504200 Rh6AG504300 Rh6BG514900 Rh6CG520700 Rh6DG506700 Rh7DG318900 |
| rosa_wichuraiana | Rw6G043910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 572 |
| Acc36I | ACCTGC | 1 cut(s) | 388 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 674 |
| AciI | CCGC | 2 cut(s) | 77, 769 |
| AclWI | GGATC | 1 cut(s) | 776 |
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 428 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 126, 674, 696 |
| AgsI | TTSAA | 3 cut(s) | 19, 61, 290 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 657, 689 |
| AluBI | AGCT | 4 cut(s) | 95, 447, 658, 731 |
| AluI | AGCT | 4 cut(s) | 95, 447, 658, 731 |
| AlwI | GGATC | 1 cut(s) | 776 |
| AoxI | GGCC | 2 cut(s) | 117, 232 |
| AspLEI | GCGC | 2 cut(s) | 392, 476 |
| AsuHPI | GGTGA | 1 cut(s) | 389 |
| AsuII | TTCGAA | 1 cut(s) | 313 |
| BalI | TGGCCA | 1 cut(s) | 119 |
| BccI | CCATC | 5 cut(s) | 109, 188, 368, 689, 703 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BfmI | CTRYAG | 2 cut(s) | 343, 736 |
| BfuAI | ACCTGC | 1 cut(s) | 388 |
| BmiI | GGNNCC | 1 cut(s) | 648 |
| BmsI | GCATC | 4 cut(s) | 112, 322, 518, 690 |
| BpmI | CTGGAG | 1 cut(s) | 636 |
| Bpu14I | TTCGAA | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 2 cut(s) | 477, 723 |
| BsaWI | WCCGGW | 1 cut(s) | 190 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 126, 674, 696 |
| Bse1I | ACTGG | 2 cut(s) | 141, 719 |
| Bse3DI | GCAATG | 3 cut(s) | 72, 399, 778 |
| BseDI | CCNNGG | 2 cut(s) | 477, 723 |
| BseGI | GGATG | 8 cut(s) | 15, 37, 135, 145, 199, 379, 510, 705 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 126, 674, 696 |
| BseMI | GCAATG | 3 cut(s) | 72, 399, 778 |
| BseMII | CTCAG | 1 cut(s) | 489 |
| BseNI | ACTGG | 2 cut(s) | 141, 719 |
| BseRI | GAGGAG | 1 cut(s) | 656 |
| BshFI | GGCC | 2 cut(s) | 119, 234 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 126, 674, 696 |
| BsnI | GGCC | 2 cut(s) | 119, 234 |
| Bsp119I | TTCGAA | 1 cut(s) | 313 |
| Bsp143I | GATC | 2 cut(s) | 418, 781 |
| BspACI | CCGC | 2 cut(s) | 77, 769 |
| BspANI | GGCC | 2 cut(s) | 119, 234 |
| BspCNI | CTCAG | 1 cut(s) | 490 |
| BspLI | GGNNCC | 1 cut(s) | 648 |
| BspMI | ACCTGC | 1 cut(s) | 388 |
| BspPI | GGATC | 1 cut(s) | 776 |
| BspT104I | TTCGAA | 1 cut(s) | 313 |
| BsrDI | GCAATG | 3 cut(s) | 72, 399, 778 |
| BsrI | ACTGG | 2 cut(s) | 141, 719 |
| BssECI | CCNNGG | 2 cut(s) | 477, 723 |
| BssMI | GATC | 2 cut(s) | 418, 781 |
| BssT1I | CCWWGG | 2 cut(s) | 477, 723 |
| Bst4CI | ACNGT | 2 cut(s) | 150, 740 |
| BstBI | TTCGAA | 1 cut(s) | 313 |
| BstC8I | GCNNGC | 2 cut(s) | 614, 636 |
| BstDEI | CTNAG | 1 cut(s) | 498 |
| BstF5I | GGATG | 8 cut(s) | 15, 37, 135, 145, 199, 379, 510, 705 |
| BstHHI | GCGC | 2 cut(s) | 392, 476 |
| BstKTI | GATC | 2 cut(s) | 421, 784 |
| BstMBI | GATC | 2 cut(s) | 418, 781 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 83, 92, 332, 494 |
| BstNSI | RCATGY | 1 cut(s) | 310 |
| BstSFI | CTRYAG | 2 cut(s) | 343, 736 |
| BsuRI | GGCC | 2 cut(s) | 119, 234 |
| BtsCI | GGATG | 8 cut(s) | 15, 37, 135, 145, 199, 379, 510, 705 |
| BtsI | GCAGTG | 2 cut(s) | 538, 623 |
| BtsIMutI | CAGTG | 3 cut(s) | 538, 623, 745 |
| BveI | ACCTGC | 1 cut(s) | 388 |
| Cac8I | GCNNGC | 2 cut(s) | 614, 636 |
| CfoI | GCGC | 2 cut(s) | 392, 476 |
| CseI | GACGC | 2 cut(s) | 52, 419 |
| Csp6I | GTAC | 1 cut(s) | 427 |
| CviAII | CATG | 3 cut(s) | 302, 307, 323 |
| CviQI | GTAC | 1 cut(s) | 427 |
| DdeI | CTNAG | 1 cut(s) | 498 |
| DpnI | GATC | 2 cut(s) | 420, 783 |
| DpnII | GATC | 2 cut(s) | 418, 781 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 2 cut(s) | 477, 723 |
| Eco147I | AGGCCT | 1 cut(s) | 234 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| EcoT14I | CCWWGG | 2 cut(s) | 477, 723 |
| ErhI | CCWWGG | 2 cut(s) | 477, 723 |
| FaeI | CATG | 3 cut(s) | 305, 310, 326 |
| FatI | CATG | 3 cut(s) | 301, 306, 322 |
| FauI | CCCGC | 1 cut(s) | 70 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| FokI | GGATG | 8 cut(s) | 22, 44, 142, 152, 206, 386, 517, 712 |
| GlaI | GCGC | 2 cut(s) | 391, 475 |
| GsuI | CTGGAG | 1 cut(s) | 636 |
| HaeIII | GGCC | 2 cut(s) | 119, 234 |
| HapII | CCGG | 1 cut(s) | 191 |
| HgaI | GACGC | 2 cut(s) | 52, 419 |
| HhaI | GCGC | 2 cut(s) | 392, 476 |
| Hin1II | CATG | 3 cut(s) | 305, 310, 326 |
| Hin6I | GCGC | 2 cut(s) | 390, 474 |
| HinP1I | GCGC | 2 cut(s) | 390, 474 |
| HinfI | GANTC | 2 cut(s) | 586, 794 |
| HpaII | CCGG | 1 cut(s) | 191 |
| HphI | GGTGA | 1 cut(s) | 389 |
| Hpy188I | TCNGA | 1 cut(s) | 423 |
| Hpy188III | TCNNGA | 4 cut(s) | 653, 662, 791, 798 |
| Hpy99I | CGWCG | 1 cut(s) | 46 |
| HpyAV | CCTTC | 5 cut(s) | 22, 76, 284, 478, 574 |
| HpyCH4III | ACNGT | 2 cut(s) | 150, 740 |
| HpyCH4V | TGCA | 4 cut(s) | 72, 397, 531, 703 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 83, 92, 332, 494 |
| HpyF3I | CTNAG | 1 cut(s) | 498 |
| Hsp92II | CATG | 3 cut(s) | 305, 310, 326 |
| HspAI | GCGC | 2 cut(s) | 390, 474 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 2 cut(s) | 418, 781 |
| LmnI | GCTCC | 1 cut(s) | 197 |
| LweI | GCATC | 4 cut(s) | 112, 322, 518, 690 |
| MaeIII | GTNAC | 3 cut(s) | 407, 750, 760 |
| MalI | GATC | 2 cut(s) | 420, 783 |
| MboI | GATC | 2 cut(s) | 418, 781 |
| MlsI | TGGCCA | 1 cut(s) | 119 |
| MluCI | AATT | 3 cut(s) | 156, 201, 628 |
| MluNI | TGGCCA | 1 cut(s) | 119 |
| MlyI | GAGTC | 1 cut(s) | 788 |
| Mox20I | TGGCCA | 1 cut(s) | 119 |
| MscI | TGGCCA | 1 cut(s) | 119 |
| MseI | TTAA | 3 cut(s) | 108, 212, 627 |
| Msp20I | TGGCCA | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 83, 92, 332, 494 |
| NdeII | GATC | 2 cut(s) | 418, 781 |
| NlaIII | CATG | 3 cut(s) | 305, 310, 326 |
| NlaIV | GGNNCC | 1 cut(s) | 648 |
| NmuCI | GTSAC | 2 cut(s) | 407, 760 |
| NspI | RCATGY | 1 cut(s) | 310 |
| NspV | TTCGAA | 1 cut(s) | 313 |
| PceI | AGGCCT | 1 cut(s) | 234 |
| PfeI | GAWTC | 1 cut(s) | 586 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 674 |
| PleI | GAGTC | 1 cut(s) | 788 |
| PpsI | GAGTC | 1 cut(s) | 788 |
| PsiI | TTATAA | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 1 cut(s) | 648 |
| RsaI | GTAC | 1 cut(s) | 428 |
| RsaNI | GTAC | 1 cut(s) | 427 |
| SaqAI | TTAA | 3 cut(s) | 108, 212, 627 |
| Sau3AI | GATC | 2 cut(s) | 418, 781 |
| SchI | GAGTC | 1 cut(s) | 788 |
| SfaNI | GCATC | 4 cut(s) | 112, 322, 518, 690 |
| SfcI | CTRYAG | 2 cut(s) | 343, 736 |
| SfuI | TTCGAA | 1 cut(s) | 313 |
| Sse9I | AATT | 3 cut(s) | 156, 201, 628 |
| SseBI | AGGCCT | 1 cut(s) | 234 |
| SsiI | CCGC | 2 cut(s) | 77, 769 |
| StuI | AGGCCT | 1 cut(s) | 234 |
| StyI | CCWWGG | 2 cut(s) | 477, 723 |
| TaaI | ACNGT | 2 cut(s) | 150, 740 |
| TaqI | TCGA | 1 cut(s) | 313 |
| TasI | AATT | 3 cut(s) | 156, 201, 628 |
| TfiI | GAWTC | 1 cut(s) | 586 |
| Tru1I | TTAA | 3 cut(s) | 108, 212, 627 |
| Tru9I | TTAA | 3 cut(s) | 108, 212, 627 |
| TscAI | CASTG | 3 cut(s) | 538, 623, 745 |
| TseFI | GTSAC | 2 cut(s) | 407, 760 |
| Tsp45I | GTSAC | 2 cut(s) | 407, 760 |
| TspDTI | ATGAA | 4 cut(s) | 105, 146, 197, 530 |
| TspGWI | ACGGA | 1 cut(s) | 774 |
| TspRI | CASTG | 3 cut(s) | 538, 623, 745 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 674 |
| XceI | RCATGY | 1 cut(s) | 310 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 615 |