Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Reverse (-)

340108 .. 342040

Gene Structure 1933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G01980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGAAGCTCTCTTGTTTGGTTTTTCTCATAGTATCGTCTCTTGTTTCGAGTTCTCTTGCCACCGCTCCGCCCAACACATCTATATATGAAAGCTTTCTCCAATGTTTCAGCAATCAAACAGGTGCTCCTCCTGAGAAGTTATGCGACGTCGTTCTGCCTCAAAGCAGTGCCAGCTTCACTCCAACCCTACGTGCCTACATCCGTAACGCTCGTTTCAACACTTCCACGTCCCCCAAACCTCTGCTCGTTATCGCGGCGCGTTCTGAGTGCCACGTCCAGGCCACCGTCCTCTGCACCAAATCTCTCAACTTCCAGCTCAAGACTCGCAGCGGCGGCCATGACTACGACGGCGTTTCCTACATCTCTAACCGCCCTTTCTTCGTCCTCGACATGTCCTATCTCCGTAACATTACCGTCGATATGTCCGACGACGGCGGCTCTGCTTGGGTTGGAGCCGGCGCTACTCTCGGCGAAGTTTATTACAACATTTGGCAGAGCAGCAAAACTCACGGCACTCACGGATTTCCCGCCGGTGTTTGTCCCACAGTAGGCGCTGGAGGTCACATTAGCGGCGGGGGCTACGGCAACATGATCAGAAAATACGGACTTTCCGTGGACTACGTCACGGACGCCAAAATCGTAGACGTGAACGGACGGATTCTCGATCGTAAATCGATGGGAGAGGATTTGTTTTGGGCGATTGGAGGCGGTGGTGGTGCGAGCTTCGGCGTGATCTTATCTTTCAAGATCAAACTCGTGCCTGTTCCTCCGAGGGTGACTGTTTTCAGAGTGGAGAAGACCCTAGTAGAAAACGCACTTGACATGGTCCATAAATGGCAGTTTGTTGCTCCCAAGACCAGCCCGGATCTCTTCATGAGGCTAATGTTGCAGCCAGTGACCCGGAACACGACTCAGACGGTTCGCGCGTCGGTAGTTGCTCTGTTCTTGGGAAAACAGAGCGATCTCATGTCTCTGCTGACCAAGGAGTTCCCCGAGCTTGGTCTGAAGCCGGAGAATTGCACGGAGATGACGTGGATACAGTCGGTGATGTGGTGGGCCAACAACGACAACGCCACGGTGATTAAACCGGAGATCCTGCTGGATCGAAATCCGGATTCGGCGTCTTTCTTGAAAAGAAAATCGGATTACGTGGAGAAAGAGATCAGCAAAGACGGTTTAGATTTCTTGTGTAAGAAGTTGATGGAGGCTGGGAAGCTAGGGCTAGTGTTCAATCCATACGGAGGGAAAATGAGCGAAGTTGCTACGACGGCGACTCCGTTCCCACACAGGAAGAGGCTTTTCAAGGTCCAGCATTCGATGAACTGGAAAGACCCGGGCACTGATGTTGAAAGCAGTTTCATGGAAAAGACGAGAAGCTTCTACAGCTACATGGCTCCTTTCGTGACCAAGAATCCAAGACACACGTATCTCAACTACAGGGATCTTGATATCGGGATCAACAGCCATGGCCCAAACAGTTACAGAGAAGCTGAGGTTTACGGGAGAAAGTATTTCGGAGAGAATTTTGATCGGTTGGTCAAAGTCAAAACAGCCGTGGATCCAGAAAACTTTTTCAGAGATGAACAAAGTATACCTACCTTGCCTACCAAGCCATCCTCGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0012505 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

541

Amino Acids

60.1

Weight (kDa)

9.01

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	80 - 221	1.8e-19	FAD binding domain
BBE	PF08031	475 - 532	3.1e-20	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	150
AccBSI	CCGCTC	1 cut(s)	65
AccI	GTMKAC	2 cut(s)	642, 1591
AccII	CGCG	4 cut(s)	254, 259, 924, 926
AccIII	TCCGGA	1 cut(s)	1111
AclWI	GGATC	7 cut(s)	873, 1087, 1110, 1449, 1463, 1553, 1566
AcoI	YGGCCR	1 cut(s)	334
AcsI	RAATTY	1 cut(s)	1522
AcuI	CTGAAG	1 cut(s)	1025
AcyI	GRCGYC	3 cut(s)	147, 630, 1121
AfiI	CCNNNNNNNGG	4 cut(s)	277, 548, 998, 1241
AflIII	ACRYGT	2 cut(s)	390, 1422
AgsI	TTSAA	6 cut(s)	217, 745, 1132, 1231, 1303, 1349
AjiI	CACGTC	4 cut(s)	228, 274, 646, 1032
AjnI	CCWGG	1 cut(s)	276
Alw21I	GWGCWC	1 cut(s)	127
Alw26I	GTCTC	2 cut(s)	42, 975
AlwI	GGATC	7 cut(s)	873, 1087, 1110, 1449, 1463, 1553, 1566
Ama87I	CYCGRG	3 cut(s)	992, 1333, 1618
Aor13HI	TCCGGA	1 cut(s)	1111
AoxI	GGCC	4 cut(s)	279, 334, 1056, 1468
ApeKI	GCWGC	3 cut(s)	327, 498, 889
ApoI	RAATTY	1 cut(s)	1522
Asp700I	GAANNNNTTC	1 cut(s)	93
AspLEI	GCGC	4 cut(s)	259, 461, 554, 926
AspS9I	GGNCC	4 cut(s)	826, 1056, 1306, 1469
AsuC2I	CCSGG	4 cut(s)	863, 901, 1334, 1335
AsuHPI	GGTGA	3 cut(s)	787, 1057, 1090
AvaI	CYCGRG	3 cut(s)	992, 1333, 1618
AvaII	GGWCC	2 cut(s)	826, 1306
BaeGI	GKGCMC	1 cut(s)	1340
BaeI	ACNNNNGTAYC	2 cut(s)	1409, 1442
BamHI	GGATCC	1 cut(s)	1558
BauI	CACGAG	1 cut(s)	755
BbsI	GAAGAC	1 cut(s)	803
Bbv12I	GWGCWC	1 cut(s)	127
BbvCI	CCTCAGC	1 cut(s)	1491
BbvI	GCAGC	3 cut(s)	339, 510, 901
BccI	CCATC	3 cut(s)	670, 1195, 1621
BceAI	ACGGC	6 cut(s)	364, 448, 526, 598, 1284, 1538
BciT130I	CCWGG	1 cut(s)	278
BciVI	GTATCC	1 cut(s)	1029
BclI	TGATCA	1 cut(s)	591
BcnI	CCSGG	4 cut(s)	863, 901, 1334, 1335
BcoDI	GTCTC	2 cut(s)	42, 975
BfaI	CTAG	3 cut(s)	803, 1217, 1223
BfmI	CTRYAG	2 cut(s)	1381, 1435
BfoI	RGCGCY	2 cut(s)	462, 555
BfuI	GTATCC	1 cut(s)	1029
BisI	GCNGC	8 cut(s)	255, 328, 331, 334, 436, 499, 571, 890
BlsI	GCNGC	8 cut(s)	256, 329, 332, 335, 437, 500, 572, 891
Bme1390I	CCNGG	5 cut(s)	278, 863, 901, 1334, 1335
Bme18I	GGWCC	2 cut(s)	826, 1306
BmeT110I	CYCGRG	3 cut(s)	992, 1333, 1618
BmgBI	CACGTC	4 cut(s)	228, 274, 646, 1032
BmgT120I	GGNCC	4 cut(s)	826, 1056, 1306, 1469
BmiI	GGNNCC	3 cut(s)	454, 1395, 1560
BmrFI	CCNGG	5 cut(s)	278, 863, 901, 1334, 1335
BpiI	GAAGAC	1 cut(s)	803
BpmI	CTGGAG	1 cut(s)	576
Bpu10I	CCTNAGC	1 cut(s)	1491
BpuEI	CTTGAG	1 cut(s)	302
BpuMI	CCSGG	4 cut(s)	863, 901, 1334, 1335
Bsa29I	ATCGAT	1 cut(s)	674
BsaAI	YACGTR	3 cut(s)	191, 1150, 1425
BsaBI	GATNNNNATC	1 cut(s)	1107
BsaHI	GRCGYC	3 cut(s)	147, 630, 1121
BsaJI	CCNNGG	7 cut(s)	612, 770, 981, 1074, 1333, 1465, 1554
BsaWI	WCCGGW	2 cut(s)	1087, 1111
BsaXI	ACNNNNNCTCC	6 cut(s)	109, 139, 1016, 1046, 1258, 1288
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 548, 998, 1241
Bse118I	RCCGGY	2 cut(s)	455, 530
Bse1I	ACTGG	2 cut(s)	893, 1328
Bse8I	GATNNNNATC	1 cut(s)	1107
BseAI	TCCGGA	1 cut(s)	1111
BseBI	CCWGG	1 cut(s)	278
BseCI	ATCGAT	1 cut(s)	674
BseDI	CCNNGG	7 cut(s)	612, 770, 981, 1074, 1333, 1465, 1554
BseGI	GGATG	2 cut(s)	198, 1613
BseJI	GATNNNNATC	1 cut(s)	1107
BseLI	CCNNNNNNNGG	4 cut(s)	277, 548, 998, 1241
BseMII	CTCAG	4 cut(s)	123, 255, 926, 1482
BseNI	ACTGG	2 cut(s)	893, 1328
BseRI	GAGGAG	1 cut(s)	117
BseSI	GKGCMC	1 cut(s)	1340
BseXI	GCAGC	3 cut(s)	339, 510, 901
BseYI	CCCAGC	1 cut(s)	1208
BsgI	GTGCAG	1 cut(s)	277
Bsh1236I	CGCG	4 cut(s)	254, 259, 924, 926
Bsh1285I	CGRYCG	1 cut(s)	667
BshFI	GGCC	4 cut(s)	281, 336, 1058, 1470
BshVI	ATCGAT	1 cut(s)	674
BsiEI	CGRYCG	1 cut(s)	667
BsiHKAI	GWGCWC	1 cut(s)	127
BsiHKCI	CYCGRG	3 cut(s)	992, 1333, 1618
BsiSI	CCGG	8 cut(s)	456, 531, 863, 901, 1010, 1088, 1112, 1334
BslFI	GGGAC	2 cut(s)	214, 525
BslI	CCNNNNNNNGG	4 cut(s)	277, 548, 998, 1241
BsmAI	GTCTC	2 cut(s)	42, 975
BsmBI	CGTCTC	1 cut(s)	42
BsmFI	GGGAC	2 cut(s)	214, 525
BsmI	GAATGC	1 cut(s)	1312
BsnI	GGCC	4 cut(s)	281, 336, 1058, 1470
BsoBI	CYCGRG	3 cut(s)	992, 1333, 1618
Bsp1286I	GDGCHC	2 cut(s)	127, 1340
Bsp13I	TCCGGA	1 cut(s)	1111
Bsp19I	CCATGG	1 cut(s)	1465
BspANI	GGCC	4 cut(s)	281, 336, 1058, 1470
BspCNI	CTCAG	4 cut(s)	124, 256, 925, 1483
BspDI	ATCGAT	1 cut(s)	674
BspEI	TCCGGA	1 cut(s)	1111
BspFNI	CGCG	4 cut(s)	254, 259, 924, 926
BspHI	TCATGA	1 cut(s)	873
BspLI	GGNNCC	3 cut(s)	454, 1395, 1560
BspPI	GGATC	7 cut(s)	873, 1087, 1110, 1449, 1463, 1553, 1566
BsrBI	CCGCTC	1 cut(s)	65
BsrFI	RCCGGY	2 cut(s)	455, 530
BsrI	ACTGG	2 cut(s)	893, 1328
BssAI	RCCGGY	2 cut(s)	455, 530
BssECI	CCNNGG	7 cut(s)	612, 770, 981, 1074, 1333, 1465, 1554
BssNAI	GTATAC	1 cut(s)	1592
BssNI	GRCGYC	3 cut(s)	147, 630, 1121
BssSI	CACGAG	1 cut(s)	755
BssT1I	CCWWGG	2 cut(s)	981, 1465
Bst1107I	GTATAC	1 cut(s)	1592
Bst2BI	CACGAG	1 cut(s)	755
Bst2UI	CCWGG	1 cut(s)	278
Bst4CI	ACNGT	9 cut(s)	286, 415, 547, 781, 919, 1041, 1078, 1175, 1478
Bst6I	CTCTTC	2 cut(s)	875, 1286
BstACI	GRCGYC	3 cut(s)	147, 630, 1121
BstBAI	YACGTR	3 cut(s)	191, 1150, 1425
BstC8I	GCNNGC	3 cut(s)	172, 457, 721
BstDEI	CTNAG	4 cut(s)	132, 264, 912, 1491
BstDSI	CCRYGG	4 cut(s)	612, 1074, 1465, 1554
BstF5I	GGATG	2 cut(s)	198, 1613
BstFNI	CGCG	4 cut(s)	254, 259, 924, 926
BstH2I	RGCGCY	2 cut(s)	462, 555
BstHHI	GCGC	4 cut(s)	259, 461, 554, 926
BstMAI	GTCTC	2 cut(s)	42, 975
BstMCI	CGRYCG	1 cut(s)	667
BstMWI	GCNNNNNNNGC	7 cut(s)	171, 333, 576, 886, 1268, 1383, 1609
BstNI	CCWGG	1 cut(s)	278
BstNSI	RCATGY	1 cut(s)	394
BstSCI	CCNGG	5 cut(s)	276, 861, 899, 1332, 1333
BstSFI	CTRYAG	2 cut(s)	1381, 1435
BstSLI	GKGCMC	1 cut(s)	1340
BstUI	CGCG	4 cut(s)	254, 259, 924, 926
BstV1I	GCAGC	3 cut(s)	339, 510, 901
BstV2I	GAAGAC	1 cut(s)	803
BstX2I	RGATCY	4 cut(s)	865, 1092, 1441, 1558
BstYI	RGATCY	4 cut(s)	865, 1092, 1441, 1558
BstZ17I	GTATAC	1 cut(s)	1592
Bsu15I	ATCGAT	1 cut(s)	674
BsuI	GTATCC	1 cut(s)	1029
BsuRI	GGCC	4 cut(s)	281, 336, 1058, 1470
BsuTUI	ATCGAT	1 cut(s)	674
BtgI	CCRYGG	4 cut(s)	612, 1074, 1465, 1554
BtrI	CACGTC	4 cut(s)	228, 274, 646, 1032
BtsCI	GGATG	2 cut(s)	198, 1613
BtsI	GCAGTG	1 cut(s)	172
BtsIMutI	CAGTG	3 cut(s)	172, 900, 1338
Cac8I	GCNNGC	3 cut(s)	172, 457, 721
CciI	TCATGA	1 cut(s)	873
CfoI	GCGC	4 cut(s)	259, 461, 554, 926
Cfr10I	RCCGGY	2 cut(s)	455, 530
Cfr13I	GGNCC	4 cut(s)	826, 1056, 1306, 1469
Cfr9I	CCCGGG	1 cut(s)	1333
ClaI	ATCGAT	1 cut(s)	674
CseI	GACGC	3 cut(s)	638, 915, 1110
CviAII	CATG	9 cut(s)	338, 391, 589, 823, 874, 967, 1360, 1390, 1466
DdeI	CTNAG	4 cut(s)	132, 264, 912, 1491
EaeI	YGGCCR	1 cut(s)	334
Eam1104I	CTCTTC	2 cut(s)	875, 1286
EarI	CTCTTC	2 cut(s)	875, 1286
EciI	GGCGGA	1 cut(s)	57
Eco130I	CCWWGG	2 cut(s)	981, 1465
Eco32I	GATATC	1 cut(s)	1450
Eco47I	GGWCC	2 cut(s)	826, 1306
Eco57I	CTGAAG	1 cut(s)	1025
Eco88I	CYCGRG	3 cut(s)	992, 1333, 1618
EcoRII	CCWGG	1 cut(s)	276
EcoRV	GATATC	1 cut(s)	1450
EcoT14I	CCWWGG	2 cut(s)	981, 1465
ErhI	CCWWGG	2 cut(s)	981, 1465
Esp3I	CGTCTC	1 cut(s)	42
FaeI	CATG	9 cut(s)	341, 394, 592, 826, 877, 970, 1363, 1393, 1469
FaqI	GGGAC	2 cut(s)	214, 525
FatI	CATG	9 cut(s)	337, 390, 588, 822, 873, 966, 1359, 1389, 1465
FauI	CCCGC	2 cut(s)	535, 566
FbaI	TGATCA	1 cut(s)	591
FblI	GTMKAC	2 cut(s)	642, 1591
Fnu4HI	GCNGC	8 cut(s)	255, 328, 331, 334, 436, 499, 571, 890
FokI	GGATG	2 cut(s)	185, 1600
Fsp4HI	GCNGC	8 cut(s)	255, 328, 331, 334, 436, 499, 571, 890
FspBI	CTAG	3 cut(s)	803, 1217, 1223
GlaI	GCGC	4 cut(s)	258, 460, 553, 925
GluI	GCNGC	8 cut(s)	255, 328, 331, 334, 436, 499, 571, 890
GsaI	CCCAGC	1 cut(s)	1212
GsuI	CTGGAG	1 cut(s)	576
HaeII	RGCGCY	2 cut(s)	462, 555
HaeIII	GGCC	4 cut(s)	281, 336, 1058, 1470
HapII	CCGG	8 cut(s)	456, 531, 863, 901, 1010, 1088, 1112, 1334
HgaI	GACGC	3 cut(s)	638, 915, 1110
HhaI	GCGC	4 cut(s)	259, 461, 554, 926
Hin1I	GRCGYC	3 cut(s)	147, 630, 1121
Hin1II	CATG	9 cut(s)	341, 394, 592, 826, 877, 970, 1363, 1393, 1469
Hin6I	GCGC	4 cut(s)	257, 459, 552, 924
HinP1I	GCGC	4 cut(s)	257, 459, 552, 924
HindIII	AAGCTT	2 cut(s)	91, 1375
HinfI	GANTC	6 cut(s)	322, 658, 910, 1115, 1273, 1411
HpaII	CCGG	8 cut(s)	456, 531, 863, 901, 1010, 1088, 1112, 1334
HphI	GGTGA	3 cut(s)	787, 1057, 1090
Hpy166II	GTNNAC	5 cut(s)	616, 643, 649, 1498, 1592
Hpy8I	GTNNAC	5 cut(s)	616, 643, 649, 1498, 1592
Hpy99I	CGWCG	8 cut(s)	149, 152, 350, 419, 431, 434, 931, 1270
HpyCH4III	ACNGT	9 cut(s)	286, 415, 547, 781, 919, 1041, 1078, 1175, 1478
HpyCH4IV	ACGT	9 cut(s)	147, 190, 227, 273, 621, 645, 1031, 1149, 1424
HpyCH4V	TGCA	3 cut(s)	294, 889, 1020
HpyF10VI	GCNNNNNNNGC	7 cut(s)	171, 333, 576, 886, 1268, 1383, 1609
HpyF3I	CTNAG	4 cut(s)	132, 264, 912, 1491
HpySE526I	ACGT	9 cut(s)	147, 190, 227, 273, 621, 645, 1031, 1149, 1424
Hsp92I	GRCGYC	3 cut(s)	147, 630, 1121
Hsp92II	CATG	9 cut(s)	341, 394, 592, 826, 877, 970, 1363, 1393, 1469
HspAI	GCGC	4 cut(s)	257, 459, 552, 924
Kpn2I	TCCGGA	1 cut(s)	1111
KroI	GCCGGC	1 cut(s)	455
KroNI	GCCGGC	1 cut(s)	457
Ksp22I	TGATCA	1 cut(s)	591
LmnI	GCTCC	5 cut(s)	70, 130, 452, 853, 1399
Lsp1109I	GCAGC	3 cut(s)	339, 510, 901
MaeI	CTAG	3 cut(s)	803, 1217, 1223
MaeII	ACGT	9 cut(s)	147, 190, 227, 273, 621, 645, 1031, 1149, 1424
MaeIII	GTNAC	8 cut(s)	203, 404, 560, 622, 775, 895, 1402, 1478
MbiI	CCGCTC	1 cut(s)	65
MboII	GAAGA	4 cut(s)	370, 808, 862, 1303
MflI	RGATCY	4 cut(s)	865, 1092, 1441, 1558
MhlI	GDGCHC	2 cut(s)	127, 1340
MluCI	AATT	2 cut(s)	1015, 1522
MlyI	GAGTC	3 cut(s)	316, 904, 1267
MmeI	TCCRAC	3 cut(s)	206, 430, 450
MroI	TCCGGA	1 cut(s)	1111
MroNI	GCCGGC	1 cut(s)	455
MroXI	GAANNNNTTC	1 cut(s)	93
MseI	TTAA	1 cut(s)	1083
MslI	CAYNNNNRTG	1 cut(s)	1025
MspA1I	CMGCKG	1 cut(s)	330
MspI	CCGG	8 cut(s)	456, 531, 863, 901, 1010, 1088, 1112, 1334
MspR9I	CCNGG	5 cut(s)	278, 863, 901, 1334, 1335
Mva1269I	GAATGC	1 cut(s)	1312
MvaI	CCWGG	1 cut(s)	278
MvnI	CGCG	4 cut(s)	254, 259, 924, 926
MwoI	GCNNNNNNNGC	7 cut(s)	171, 333, 576, 886, 1268, 1383, 1609
NaeI	GCCGGC	1 cut(s)	457
NciI	CCSGG	4 cut(s)	863, 901, 1334, 1335
NcoI	CCATGG	1 cut(s)	1465
NgoMIV	GCCGGC	1 cut(s)	455
NlaIII	CATG	9 cut(s)	341, 394, 592, 826, 877, 970, 1363, 1393, 1469
NlaIV	GGNNCC	3 cut(s)	454, 1395, 1560
NmeAIII	GCCGAG	1 cut(s)	447
NmuCI	GTSAC	5 cut(s)	560, 622, 775, 895, 1402
NspI	RCATGY	1 cut(s)	394
PaeR7I	CTCGAG	1 cut(s)	1618
PagI	TCATGA	1 cut(s)	873
PciI	ACATGT	1 cut(s)	390
PcsI	WCGNNNNNNNCGW	6 cut(s)	423, 609, 636, 923, 1028, 1274
PctI	GAATGC	1 cut(s)	1312
PdiI	GCCGGC	1 cut(s)	457
PdmI	GAANNNNTTC	1 cut(s)	93
PfeI	GAWTC	3 cut(s)	658, 1115, 1411
PflFI	GACNNNGTC	2 cut(s)	620, 824
PkrI	GCNGC	8 cut(s)	256, 329, 332, 335, 437, 500, 572, 891
Ple19I	CGATCG	1 cut(s)	667
PleI	GAGTC	3 cut(s)	316, 904, 1267
PpsI	GAGTC	3 cut(s)	316, 904, 1267
Ppu21I	YACGTR	3 cut(s)	191, 1150, 1425
PscI	ACATGT	1 cut(s)	390
Psp6I	CCWGG	1 cut(s)	276
PspFI	CCCAGC	1 cut(s)	1208
PspGI	CCWGG	1 cut(s)	276
PspN4I	GGNNCC	3 cut(s)	454, 1395, 1560
PspPI	GGNCC	4 cut(s)	826, 1056, 1306, 1469
PspXI	VCTCGAGB	1 cut(s)	1618
PsrI	GAACNNNNNNTAC	2 cut(s)	1575, 1607
PsuI	RGATCY	4 cut(s)	865, 1092, 1441, 1558
PsyI	GACNNNGTC	2 cut(s)	620, 824
PvuI	CGATCG	1 cut(s)	667
RseI	CAYNNNNRTG	1 cut(s)	1025
SaqAI	TTAA	1 cut(s)	1083
SatI	GCNGC	8 cut(s)	255, 328, 331, 334, 436, 499, 571, 890
Sau96I	GGNCC	4 cut(s)	826, 1056, 1306, 1469
SchI	GAGTC	3 cut(s)	316, 904, 1267
ScrFI	CCNGG	5 cut(s)	278, 863, 901, 1334, 1335
SduI	GDGCHC	2 cut(s)	127, 1340
SfcI	CTRYAG	2 cut(s)	1381, 1435
Sfr274I	CTCGAG	1 cut(s)	1618
SgrAI	CRCCGGYG	1 cut(s)	530
SinI	GGWCC	2 cut(s)	826, 1306
SlaI	CTCGAG	1 cut(s)	1618
SmaI	CCCGGG	1 cut(s)	1335
SmiMI	CAYNNNNRTG	1 cut(s)	1025
SmlI	CTYRAG	2 cut(s)	317, 1618
SmoI	CTYRAG	2 cut(s)	317, 1618
Sse9I	AATT	2 cut(s)	1015, 1522
SspMI	CTAG	3 cut(s)	803, 1217, 1223
StyD4I	CCNGG	5 cut(s)	276, 861, 899, 1332, 1333
StyI	CCWWGG	2 cut(s)	981, 1465
TaaI	ACNGT	9 cut(s)	286, 415, 547, 781, 919, 1041, 1078, 1175, 1478
TaiI	ACGT	9 cut(s)	150, 193, 230, 276, 624, 648, 1034, 1152, 1427
TaqI	TCGA	8 cut(s)	47, 387, 417, 663, 674, 1105, 1316, 1619
TasI	AATT	2 cut(s)	1015, 1522
TauI	GCSGC	5 cut(s)	257, 333, 336, 438, 573
TfiI	GAWTC	3 cut(s)	658, 1115, 1411
Tru1I	TTAA	1 cut(s)	1083
Tru9I	TTAA	1 cut(s)	1083
TscAI	CASTG	3 cut(s)	172, 900, 1345
TseFI	GTSAC	5 cut(s)	560, 622, 775, 895, 1402
TseI	GCWGC	3 cut(s)	327, 498, 889
Tsp45I	GTSAC	5 cut(s)	560, 622, 775, 895, 1402
TspDTI	ATGAA	6 cut(s)	17, 102, 862, 1334, 1348, 1596
TspMI	CCCGGG	1 cut(s)	1333
TspRI	CASTG	3 cut(s)	172, 900, 1345
Tth111I	GACNNNGTC	2 cut(s)	620, 824
VpaK11BI	GGWCC	2 cut(s)	826, 1306
XapI	RAATTY	1 cut(s)	1522
XceI	RCATGY	1 cut(s)	394
XhoI	CTCGAG	1 cut(s)	1618
XmaI	CCCGGG	1 cut(s)	1333
XmiI	GTMKAC	2 cut(s)	642, 1591
XmnI	GAANNNNTTC	1 cut(s)	93
XspI	CTAG	3 cut(s)	803, 1217, 1223
ZraI	GACGTC	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.