Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Reverse (-)

52668419 .. 52671129

Gene Structure 2711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G026460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGATACAATCTAATCATACTACATGTCTCTCCTCTGTTCTTCTGCTCTTTCTCCTTCTTCACGTCTCTGCAACCTCCGCTTCTGTCTATGACGACTTCGTTCAATGCCTCAACACCCACCCAAACTCCTCAGCCACCAAGATAGTCATCCCCCAAAACAACCCTTCTTTCACTTCAACTCTCAGAGCCTACATCCGCAACGCTCGCTTCAACACCTCCACGACTCCCAAACCAGTCCTCATCCTCACGCCGACGACCGAGTCCCACGTCCAGGCCTCCGTCCTCTGCGCCGTTCAACTCAAACTCCAACTCAAAATCCGAAGCGGCGGACACGACTACGAGGGCATCTCATACGTCTCGTCCGAACCGACTTTCGTAATCCTCGACCTGTTCAACCTCCGGTCAATCGACGTCAACGCCGAGGACGCCACCGCGTGGGCCCAGGCCGGCGCGACTCTCGGAGAGTTGTACTATCGAATCTCCGAGAAGAGTAAAACGCTCGGGTTTGCCGCTGGGATTTGCCCCACTGTCGGTGTTGGTGGACACATCAGCGGCGGCGGTTATGGAAACTTGTTGAGGAAGTACGGCCTCGCCGTCGATAATGTATTGGACGCATTGATTGTTGATGTGAACGGGAAGCTTCTGGATAGAAAAGCAATGGGGGAGGATCTGTTTTGGGCTATCAGAGGCGGCGGTGGAGGAAGCTTTGGAGTGATCATATCCTATAAATTGAAGTTGGTTCCTGTGCCGGAAACGTTTACGGTTTTCCGGGTGATGAGTTACACAGAAGGTAATGCAACCGACGTCGTTTTGAGGTGGCAGGAGGTGGCGCCGACCACGGTGGATGATTTGTGGATGAGGATGTTGTTGCAGCCGGTGACTTCTCCGACCAAAAAGGGTGAGAAGACTGTTAGGATTTCGATTCTGGCCCAGTATTTAGGCAATGCTAATCAGTTGGTTTCTATTTTGGGTAAGGAGTTTCCTGAATTGGGTTTGAAGAAGGAGGACTGTTTGGAAATGAGTTGGATTGAGTCTGTGCTTTGGTGGAACGATGGTTCAACTCCCAATGTGACCAAACCAGAGGTTTTGCTTGATCGAAATCTCGACCAGGCGAGTTTCGGGAAGAGGAAGTCAGATTACGTGCAGACCCCGATTTCGAGAGAAGGGTTGGAGTCATTGTGGAAGAAGATGATTGAAGGCAAGACTGGTTTGGTGTTCAATCCATATGGTGGGAAAATGGCTCAAATTTCGGCCTCCGATGCGCCTTTTCCTCATCGGGCCGGGAATTTGTTTAAGATTCAGTACTCGGTGAATTGGGACGTTGCAGGAGAGGAAGCAACTAATGAGTATTTGAACCAAAGTAGGGAGCTTTACAGTTTTATGACCCCATTTGTGTCCAAGAATCCAAGGAGTGCTTTCTTGAACTATAGGGACCTTGACATTGGTGTCAACAATTTTGGGAAGAATAGCTTTGAACAAGGGAAGGTGTATGGATTGATGTACTTCAACGACAATTTCGATAGGTTGGTGAAGGTGAAGACTGCTGTTGATCCAGGAAATTTCTTCAGGAATGAGCAGAGTATCCCACCTCTTTCAAGTTTCAACTCAGCTGCGACTAGTGGATCAAGTTCAAACATCTCAATGGGGAAGCTGCTGGCTTTACTGCTATACTTGCTTATTGGAGCATCATTCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

565

Amino Acids

62.2

Weight (kDa)

7.6

Isoelectric Point (pI)

34.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	80 - 215	2.7e-25	FAD binding domain
BBE	PF08031	472 - 529	1.9e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1696
AasI	GACNNNNNNGTC	2 cut(s)	259, 1445
AatII	GACGTC	2 cut(s)	414, 807
AccB1I	GGYRCC	1 cut(s)	829
AccB7I	CCANNNNNTGG	2 cut(s)	435, 1229
AccII	CGCG	2 cut(s)	434, 452
AclI	AACGTT	1 cut(s)	755
AclWI	GGATC	3 cut(s)	675, 1544, 1630
AcsI	RAATTY	3 cut(s)	1245, 1285, 1558
AcuI	CTGAAG	1 cut(s)	1549
AcyI	GRCGYC	4 cut(s)	411, 426, 804, 830
AdeI	CACNNNGTG	1 cut(s)	435
AfaI	GTAC	4 cut(s)	470, 584, 1304, 1502
AfiI	CCNNNNNNNGG	6 cut(s)	271, 435, 530, 989, 1229, 1363
AflIII	ACRYGT	1 cut(s)	23
AhlI	ACTAGT	1 cut(s)	1616
AjiI	CACGTC	2 cut(s)	64, 268
AjnI	CCWGG	4 cut(s)	270, 441, 1107, 1552
AloI	GAACNNNNNNTCC	2 cut(s)	1039, 1071
AluBI	AGCT	6 cut(s)	640, 705, 1369, 1470, 1610, 1651
AluI	AGCT	6 cut(s)	640, 705, 1369, 1470, 1610, 1651
Alw26I	GTCTC	3 cut(s)	32, 70, 361
AlwI	GGATC	3 cut(s)	675, 1544, 1630
Ama87I	CYCGRG	1 cut(s)	500
AoxI	GGCC	7 cut(s)	273, 438, 444, 586, 927, 1251, 1278
ApaI	GGGCCC	1 cut(s)	442
ApeKI	GCWGC	3 cut(s)	871, 1610, 1651
ApoI	RAATTY	3 cut(s)	1245, 1285, 1558
ArsI	GACNNNNNNTTYG	2 cut(s)	1138, 1170
AspLEI	GCGC	4 cut(s)	290, 452, 832, 1264
AspS9I	GGNCC	5 cut(s)	438, 439, 928, 1278, 1432
AsuC2I	CCSGG	2 cut(s)	770, 1282
AsuHPI	GGTGA	6 cut(s)	784, 889, 911, 1321, 1540, 1546
AvaI	CYCGRG	1 cut(s)	500
AvaII	GGWCC	1 cut(s)	1432
BaeGI	GKGCMC	1 cut(s)	442
BanI	GGYRCC	1 cut(s)	829
BanII	GRGCYC	1 cut(s)	442
BarI	GAAGNNNNNNTAC	2 cut(s)	1121, 1153
BbsI	GAAGAC	2 cut(s)	911, 1544
BbvCI	CCTCAGC	1 cut(s)	130
BbvI	GCAGC	3 cut(s)	883, 1597, 1638
BccI	CCATC	1 cut(s)	1046
BceAI	ACGGC	3 cut(s)	275, 578, 601
BciT130I	CCWGG	4 cut(s)	272, 443, 1109, 1554
BciVI	GTATCC	1 cut(s)	1592
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	2 cut(s)	770, 1282
BcoDI	GTCTC	3 cut(s)	32, 70, 361
BcuI	ACTAGT	1 cut(s)	1616
BfaI	CTAG	1 cut(s)	1617
BfmI	CTRYAG	1 cut(s)	1426
BfoI	RGCGCY	1 cut(s)	833
BfuI	GTATCC	1 cut(s)	1592
BisI	GCNGC	8 cut(s)	325, 510, 553, 556, 691, 872, 1611, 1652
BlsI	GCNGC	8 cut(s)	326, 511, 554, 557, 692, 873, 1612, 1653
BmcAI	AGTACT	1 cut(s)	1304
Bme1390I	CCNGG	6 cut(s)	272, 443, 770, 1109, 1282, 1554
Bme18I	GGWCC	1 cut(s)	1432
BmeT110I	CYCGRG	1 cut(s)	500
BmgBI	CACGTC	2 cut(s)	64, 268
BmgT120I	GGNCC	5 cut(s)	438, 439, 928, 1278, 1432
BmiI	GGNNCC	4 cut(s)	440, 741, 831, 1433
BmrFI	CCNGG	6 cut(s)	272, 443, 770, 1109, 1282, 1554
BmrI	ACTGGG	1 cut(s)	925
BmsI	GCATC	3 cut(s)	354, 1249, 1694
BmuI	ACTGGG	1 cut(s)	925
BpiI	GAAGAC	2 cut(s)	911, 1544
BplI	GAGNNNNNCTC	2 cut(s)	332, 364
Bpu10I	CCTNAGC	1 cut(s)	130
BpuMI	CCSGG	2 cut(s)	770, 1282
BsaAI	YACGTR	1 cut(s)	1141
BsaBI	GATNNNNATC	2 cut(s)	146, 1098
BsaHI	GRCGYC	4 cut(s)	411, 426, 804, 830
BsaJI	CCNNGG	4 cut(s)	420, 441, 837, 1406
BsaWI	WCCGGW	1 cut(s)	399
BsaXI	ACNNNNNCTCC	8 cut(s)	110, 140, 288, 318, 656, 686, 1163, 1193
Bsc4I	CCNNNNNNNGG	6 cut(s)	271, 435, 530, 989, 1229, 1363
Bse118I	RCCGGY	2 cut(s)	446, 874
Bse1I	ACTGG	3 cut(s)	233, 931, 1210
Bse3DI	GCAATG	2 cut(s)	663, 949
Bse8I	GATNNNNATC	2 cut(s)	146, 1098
BseBI	CCWGG	4 cut(s)	272, 443, 1109, 1554
BseDI	CCNNGG	4 cut(s)	420, 441, 837, 1406
BseGI	GGATG	6 cut(s)	147, 192, 240, 850, 861, 867
BseJI	GATNNNNATC	2 cut(s)	146, 1098
BseLI	CCNNNNNNNGG	6 cut(s)	271, 435, 530, 989, 1229, 1363
BseMI	GCAATG	2 cut(s)	663, 949
BseMII	CTCAG	3 cut(s)	144, 196, 1620
BseNI	ACTGG	3 cut(s)	233, 931, 1210
BseRI	GAGGAG	2 cut(s)	22, 118
BseSI	GKGCMC	1 cut(s)	442
BseXI	GCAGC	3 cut(s)	883, 1597, 1638
BseYI	CCCAGC	1 cut(s)	512
BsgI	GTGCAG	1 cut(s)	1163
Bsh1236I	CGCG	2 cut(s)	434, 452
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	7 cut(s)	275, 440, 446, 588, 929, 1253, 1280
BshNI	GGYRCC	1 cut(s)	829
BsiEI	CGRYCG	1 cut(s)	258
BsiHKCI	CYCGRG	1 cut(s)	500
BsiSI	CCGG	6 cut(s)	400, 447, 749, 769, 875, 1281
BslFI	GGGAC	3 cut(s)	247, 1331, 1445
BslI	CCNNNNNNNGG	6 cut(s)	271, 435, 530, 989, 1229, 1363
BsmAI	GTCTC	3 cut(s)	32, 70, 361
BsmBI	CGTCTC	2 cut(s)	70, 361
BsmFI	GGGAC	3 cut(s)	247, 1331, 1445
BsnI	GGCC	7 cut(s)	275, 440, 446, 588, 929, 1253, 1280
BsoBI	CYCGRG	1 cut(s)	500
Bsp120I	GGGCCC	1 cut(s)	438
Bsp1286I	GDGCHC	1 cut(s)	442
Bsp143I	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
BspANI	GGCC	7 cut(s)	275, 440, 446, 588, 929, 1253, 1280
BspCNI	CTCAG	3 cut(s)	143, 195, 1619
BspFNI	CGCG	2 cut(s)	434, 452
BspLI	GGNNCC	4 cut(s)	440, 741, 831, 1433
BspPI	GGATC	3 cut(s)	675, 1544, 1630
BspT107I	GGYRCC	1 cut(s)	829
BsrDI	GCAATG	2 cut(s)	663, 949
BsrFI	RCCGGY	2 cut(s)	446, 874
BsrI	ACTGG	3 cut(s)	233, 931, 1210
BssAI	RCCGGY	2 cut(s)	446, 874
BssECI	CCNNGG	4 cut(s)	420, 441, 837, 1406
BssMI	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
BssNI	GRCGYC	4 cut(s)	411, 426, 804, 830
BssT1I	CCWWGG	1 cut(s)	1406
Bst2UI	CCWGG	4 cut(s)	272, 443, 1109, 1554
Bst4CI	ACNGT	6 cut(s)	529, 763, 841, 910, 1010, 1376
Bst6I	CTCTTC	2 cut(s)	482, 1118
BstACI	GRCGYC	4 cut(s)	411, 426, 804, 830
BstBAI	YACGTR	1 cut(s)	1141
BstC8I	GCNNGC	3 cut(s)	205, 448, 1656
BstDEI	CTNAG	3 cut(s)	130, 182, 1606
BstDSI	CCRYGG	1 cut(s)	837
BstF5I	GGATG	6 cut(s)	147, 192, 240, 850, 861, 867
BstFNI	CGCG	2 cut(s)	434, 452
BstH2I	RGCGCY	1 cut(s)	833
BstHHI	GCGC	4 cut(s)	290, 452, 832, 1264
BstKTI	GATC	5 cut(s)	670, 717, 1096, 1552, 1625
BstMAI	GTCTC	3 cut(s)	32, 70, 361
BstMBI	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
BstMCI	CGRYCG	1 cut(s)	258
BstMWI	GCNNNNNNNGC	5 cut(s)	77, 204, 425, 1259, 1672
BstNI	CCWGG	4 cut(s)	272, 443, 1109, 1554
BstNSI	RCATGY	1 cut(s)	27
BstSCI	CCNGG	6 cut(s)	270, 441, 768, 1107, 1280, 1552
BstSFI	CTRYAG	1 cut(s)	1426
BstSLI	GKGCMC	1 cut(s)	442
BstUI	CGCG	2 cut(s)	434, 452
BstV1I	GCAGC	3 cut(s)	883, 1597, 1638
BstV2I	GAAGAC	2 cut(s)	911, 1544
BstX2I	RGATCY	1 cut(s)	667
BstYI	RGATCY	1 cut(s)	667
BsuI	GTATCC	1 cut(s)	1592
BsuRI	GGCC	7 cut(s)	275, 440, 446, 588, 929, 1253, 1280
BtgI	CCRYGG	1 cut(s)	837
BtrI	CACGTC	2 cut(s)	64, 268
BtsCI	GGATG	6 cut(s)	147, 192, 240, 850, 861, 867
BtsIMutI	CAGTG	1 cut(s)	525
Cac8I	GCNNGC	3 cut(s)	205, 448, 1656
CfoI	GCGC	4 cut(s)	290, 452, 832, 1264
Cfr10I	RCCGGY	2 cut(s)	446, 874
Cfr13I	GGNCC	5 cut(s)	438, 439, 928, 1278, 1432
CseI	GACGC	2 cut(s)	434, 620
Csp6I	GTAC	4 cut(s)	469, 583, 1303, 1501
CviAII	CATG	1 cut(s)	24
CviQI	GTAC	4 cut(s)	469, 583, 1303, 1501
DdeI	CTNAG	3 cut(s)	130, 182, 1606
DinI	GGCGCC	1 cut(s)	831
DpnI	GATC	5 cut(s)	669, 716, 1095, 1551, 1624
DpnII	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
DraIII	CACNNNGTG	1 cut(s)	435
DrdI	GACNNNNNNGTC	2 cut(s)	259, 1445
DseDI	GACNNNNNNGTC	2 cut(s)	259, 1445
Eam1104I	CTCTTC	2 cut(s)	482, 1118
EarI	CTCTTC	2 cut(s)	482, 1118
EciI	GGCGGA	1 cut(s)	342
Eco130I	CCWWGG	1 cut(s)	1406
Eco147I	AGGCCT	1 cut(s)	275
Eco24I	GRGCYC	1 cut(s)	442
Eco47I	GGWCC	1 cut(s)	1432
Eco57I	CTGAAG	1 cut(s)	1549
Eco88I	CYCGRG	1 cut(s)	500
EcoO109I	RGGNCCY	1 cut(s)	1432
EcoRII	CCWGG	4 cut(s)	270, 441, 1107, 1552
EcoT14I	CCWWGG	1 cut(s)	1406
EcoT38I	GRGCYC	1 cut(s)	442
EgeI	GGCGCC	1 cut(s)	831
EheI	GGCGCC	1 cut(s)	831
ErhI	CCWWGG	1 cut(s)	1406
Esp3I	CGTCTC	2 cut(s)	70, 361
FaeI	CATG	1 cut(s)	27
FalI	AAGNNNNNCTT	4 cut(s)	1399, 1431, 1454, 1486
FaqI	GGGAC	3 cut(s)	247, 1331, 1445
FatI	CATG	1 cut(s)	23
FauNDI	CATATG	1 cut(s)	1225
FbaI	TGATCA	1 cut(s)	714
Fnu4HI	GCNGC	8 cut(s)	325, 510, 553, 556, 691, 872, 1611, 1652
FokI	GGATG	6 cut(s)	134, 179, 227, 857, 868, 874
FriOI	GRGCYC	1 cut(s)	442
Fsp4HI	GCNGC	8 cut(s)	325, 510, 553, 556, 691, 872, 1611, 1652
FspBI	CTAG	1 cut(s)	1617
GlaI	GCGC	4 cut(s)	289, 451, 831, 1263
GluI	GCNGC	8 cut(s)	325, 510, 553, 556, 691, 872, 1611, 1652
GsaI	CCCAGC	1 cut(s)	516
HaeII	RGCGCY	1 cut(s)	833
HaeIII	GGCC	7 cut(s)	275, 440, 446, 588, 929, 1253, 1280
HapII	CCGG	6 cut(s)	400, 447, 749, 769, 875, 1281
HgaI	GACGC	2 cut(s)	434, 620
HhaI	GCGC	4 cut(s)	290, 452, 832, 1264
Hin1I	GRCGYC	4 cut(s)	411, 426, 804, 830
Hin1II	CATG	1 cut(s)	27
Hin6I	GCGC	4 cut(s)	288, 450, 830, 1262
HinP1I	GCGC	4 cut(s)	288, 450, 830, 1262
HincII	GTYRAC	2 cut(s)	415, 1450
HindII	GTYRAC	2 cut(s)	415, 1450
HindIII	AAGCTT	2 cut(s)	638, 703
HinfI	GANTC	9 cut(s)	223, 260, 454, 477, 922, 1031, 1172, 1297, 1402
HpaII	CCGG	6 cut(s)	400, 447, 749, 769, 875, 1281
HphI	GGTGA	6 cut(s)	784, 889, 911, 1321, 1540, 1546
Hpy166II	GTNNAC	5 cut(s)	415, 542, 631, 759, 1450
Hpy188I	TCNGA	9 cut(s)	185, 320, 364, 461, 484, 686, 888, 1135, 1258
Hpy188III	TCNNGA	7 cut(s)	644, 983, 1103, 1120, 1158, 1420, 1567
Hpy8I	GTNNAC	5 cut(s)	415, 542, 631, 759, 1450
Hpy99I	CGWCG	5 cut(s)	256, 413, 599, 806, 809
HpyAV	CCTTC	8 cut(s)	65, 174, 782, 994, 1157, 1190, 1477, 1525
HpyCH4III	ACNGT	6 cut(s)	529, 763, 841, 910, 1010, 1376
HpyCH4IV	ACGT	8 cut(s)	63, 267, 354, 411, 755, 804, 1140, 1320
HpyCH4V	TGCA	5 cut(s)	71, 797, 871, 1144, 1325
HpyF10VI	GCNNNNNNNGC	5 cut(s)	77, 204, 425, 1259, 1672
HpyF3I	CTNAG	3 cut(s)	130, 182, 1606
HpySE526I	ACGT	8 cut(s)	63, 267, 354, 411, 755, 804, 1140, 1320
Hsp92I	GRCGYC	4 cut(s)	411, 426, 804, 830
Hsp92II	CATG	1 cut(s)	27
HspAI	GCGC	4 cut(s)	288, 450, 830, 1262
KasI	GGCGCC	1 cut(s)	829
KroI	GCCGGC	1 cut(s)	446
KroNI	GCCGGC	1 cut(s)	448
Ksp22I	TGATCA	1 cut(s)	714
Kzo9I	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
LmnI	GCTCC	2 cut(s)	1366, 1682
Lsp1109I	GCAGC	3 cut(s)	883, 1597, 1638
LweI	GCATC	3 cut(s)	354, 1249, 1694
MaeI	CTAG	1 cut(s)	1617
MaeII	ACGT	8 cut(s)	63, 267, 354, 411, 755, 804, 1140, 1320
MaeIII	GTNAC	3 cut(s)	779, 877, 1069
MalI	GATC	5 cut(s)	669, 716, 1095, 1551, 1624
MboI	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	1 cut(s)	442
MluCI	AATT	8 cut(s)	728, 986, 1245, 1285, 1312, 1453, 1513, 1558
Mly113I	GGCGCC	1 cut(s)	830
MlyI	GAGTC	5 cut(s)	217, 269, 448, 1040, 1181
MmeI	TCCRAC	4 cut(s)	331, 911, 1004, 1149
MroNI	GCCGGC	1 cut(s)	446
MseI	TTAA	1 cut(s)	1293
MslI	CAYNNNNRTG	1 cut(s)	1640
MspA1I	CMGCKG	3 cut(s)	512, 552, 1610
MspI	CCGG	6 cut(s)	400, 447, 749, 769, 875, 1281
MspR9I	CCNGG	6 cut(s)	272, 443, 770, 1109, 1282, 1554
MvaI	CCWGG	4 cut(s)	272, 443, 1109, 1554
MvnI	CGCG	2 cut(s)	434, 452
MwoI	GCNNNNNNNGC	5 cut(s)	77, 204, 425, 1259, 1672
NaeI	GCCGGC	1 cut(s)	448
NarI	GGCGCC	1 cut(s)	830
NciI	CCSGG	2 cut(s)	770, 1282
NdeI	CATATG	1 cut(s)	1225
NdeII	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
NgoMIV	GCCGGC	1 cut(s)	446
NlaIII	CATG	1 cut(s)	27
NlaIV	GGNNCC	4 cut(s)	440, 741, 831, 1433
NmeAIII	GCCGAG	1 cut(s)	445
NmuCI	GTSAC	2 cut(s)	877, 1069
NspI	RCATGY	1 cut(s)	27
PceI	AGGCCT	1 cut(s)	275
PciI	ACATGT	1 cut(s)	23
PcsI	WCGNNNNNNNCGW	6 cut(s)	360, 365, 381, 417, 591, 1515
PdiI	GCCGGC	1 cut(s)	448
PfeI	GAWTC	4 cut(s)	477, 922, 1297, 1402
PflFI	GACNNNGTC	1 cut(s)	259
PflMI	CCANNNNNTGG	2 cut(s)	435, 1229
PfoI	TCCNGGA	1 cut(s)	1552
PkrI	GCNGC	8 cut(s)	326, 511, 554, 557, 692, 873, 1612, 1653
PleI	GAGTC	5 cut(s)	217, 268, 448, 1039, 1180
PluTI	GGCGCC	1 cut(s)	833
PpsI	GAGTC	5 cut(s)	217, 268, 448, 1039, 1180
Ppu21I	YACGTR	1 cut(s)	1141
PpuMI	RGGWCCY	1 cut(s)	1432
PscI	ACATGT	1 cut(s)	23
PsiI	TTATAA	1 cut(s)	1696
Psp1406I	AACGTT	1 cut(s)	755
Psp5II	RGGWCCY	1 cut(s)	1432
Psp6I	CCWGG	4 cut(s)	270, 441, 1107, 1552
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	4 cut(s)	270, 441, 1107, 1552
PspN4I	GGNNCC	4 cut(s)	440, 741, 831, 1433
PspOMI	GGGCCC	1 cut(s)	438
PspPI	GGNCC	5 cut(s)	438, 439, 928, 1278, 1432
PspPPI	RGGWCCY	1 cut(s)	1432
PsuI	RGATCY	1 cut(s)	667
PsyI	GACNNNGTC	1 cut(s)	259
PvuII	CAGCTG	1 cut(s)	1610
RsaI	GTAC	4 cut(s)	470, 584, 1304, 1502
RsaNI	GTAC	4 cut(s)	469, 583, 1303, 1501
RseI	CAYNNNNRTG	1 cut(s)	1640
SaqAI	TTAA	1 cut(s)	1293
SatI	GCNGC	8 cut(s)	325, 510, 553, 556, 691, 872, 1611, 1652
Sau3AI	GATC	5 cut(s)	667, 714, 1093, 1549, 1622
Sau96I	GGNCC	5 cut(s)	438, 439, 928, 1278, 1432
ScaI	AGTACT	1 cut(s)	1304
SchI	GAGTC	5 cut(s)	217, 269, 448, 1040, 1181
ScrFI	CCNGG	6 cut(s)	272, 443, 770, 1109, 1282, 1554
SduI	GDGCHC	1 cut(s)	442
SfaNI	GCATC	3 cut(s)	354, 1249, 1694
SfcI	CTRYAG	1 cut(s)	1426
SfoI	GGCGCC	1 cut(s)	831
SinI	GGWCC	1 cut(s)	1432
SmiMI	CAYNNNNRTG	1 cut(s)	1640
SpeI	ACTAGT	1 cut(s)	1616
Sse9I	AATT	8 cut(s)	728, 986, 1245, 1285, 1312, 1453, 1513, 1558
SseBI	AGGCCT	1 cut(s)	275
SspDI	GGCGCC	1 cut(s)	829
SspMI	CTAG	1 cut(s)	1617
StuI	AGGCCT	1 cut(s)	275
StyD4I	CCNGG	6 cut(s)	270, 441, 768, 1107, 1280, 1552
StyI	CCWWGG	1 cut(s)	1406
TaaI	ACNGT	6 cut(s)	529, 763, 841, 910, 1010, 1376
TaiI	ACGT	8 cut(s)	66, 270, 357, 414, 758, 807, 1143, 1323
TaqI	TCGA	9 cut(s)	384, 408, 475, 597, 920, 1096, 1104, 1157, 1518
TaqII	GACCGA	1 cut(s)	272
TasI	AATT	8 cut(s)	728, 986, 1245, 1285, 1312, 1453, 1513, 1558
TatI	WGTACW	3 cut(s)	468, 1302, 1500
TauI	GCSGC	5 cut(s)	327, 512, 555, 558, 693
TfiI	GAWTC	4 cut(s)	477, 922, 1297, 1402
Tru1I	TTAA	1 cut(s)	1293
Tru9I	TTAA	1 cut(s)	1293
TscAI	CASTG	1 cut(s)	532
TseFI	GTSAC	2 cut(s)	877, 1069
TseI	GCWGC	3 cut(s)	871, 1610, 1651
Tsp45I	GTSAC	2 cut(s)	877, 1069
TspGWI	ACGGA	1 cut(s)	268
TspRI	CASTG	1 cut(s)	532
Tth111I	GACNNNGTC	1 cut(s)	259
Van91I	CCANNNNNTGG	2 cut(s)	435, 1229
VpaK11BI	GGWCC	1 cut(s)	1432
XapI	RAATTY	3 cut(s)	1245, 1285, 1558
XceI	RCATGY	1 cut(s)	27
XspI	CTAG	1 cut(s)	1617
ZraI	GACGTC	2 cut(s)	412, 805
ZrmI	AGTACT	1 cut(s)	1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.