Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Reverse (-)

13348447 .. 13350043

Gene Structure 1597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032307

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGTCGCACATTACGCTTATTCTCTCTTCTGTTATTGTACTTCTCCTCTCCACTTCACCTCCAACCTCTGGTTCTGTCTACGACGACTTCGTTCAATGCCTGAACTCCCACCCAAACTCTTCAGCCACCAAGATAGTCATCCCCCAAAACAACCCTTCTTTCACTTCAACTCTCAGAGCCTACATCCGCAACTCTCGCTTCAACACCTCCACGACTCCAAAACCAGTCCTCATCCTCACGCCAACAACCGAGTCCCACGTCCAGGCCTCTGTCCTCTGCGCCAAGAAACTCGGCGTCCAGCTCAAAATCCGAAGCGGCGGACACGACTACGAGGGAATCTCATATGTCTCGACTGAACAGAGTTTCATAGTCCTTGATATGTTCAACCTCCGGTCAATCAACGTCAACACCGGAGAAAGCTCCGTGTGGGCCCAGGCCGGAGCTCGGAGAACTGTACTACAGAATTTCCCAGAAGACGGCGGCGGTTATGGAAACTTACTAAGGAAGTACGGCCTTGCCGTAGATAATGTATTGGATGCATTAATTGTTAATGTGAATGGGAAGCTTCTAGATAGAAAATCAATGGGGGAGGATTTGTTCTGGGCCATCAGAGGAAGCGGCGGAGGAAGCTTTGGAGTGATCGTGTCGTACAAGTTGAGGTTGGTTCCGGTACCTGAAACGGTTACAGTGTTCAGGGTTATGCGTTACTTGGAGCAGAACGCAACCGACGTCGTTTTGAGGTGGCAGAAGGTGGCTCCGTGTACTGAGGATGGTTTATGGATGAGGGTGTTGGTGCAGCCGGTGAGTTCTCCAACCAAGAAGGGTGAGAAAACTGTTAGGATCTCGATTTTGGCCCAGTTTTTAGGCAATGCTAATAAGCTGGTTTCCATTTTGGGTAGTCAGTTTCCTGAATTGGGTTTGAAGAAAGAGGACTGTTTGGAAATGAGTTGGATCGAGTCCGTGGTTTGGTGGAACGATGGTTCGACTCCCAACGTCACCAAACCAGAGTCTTTGCTCAATCGAAACCTTAACCATGCAAGTTTCTTGAAGAGGAAGTCAGATTATGTCCAGACACCGATTTCGCGAGAGGGGTTGGAGGCATTGTGGAAGAAGTTGATGGAAGTTGGGAAGACTGGCTTGGTATTCAATCCTTATGGAGGGAAAATGGCTCAGATTTCGGCCTCGGATGCGCCTTTTCCTCACCGGGCTGGGAACTTGTTTAAGATTCAGTACTCGGTGGGGTGGAATGTTGCAGGAGAGGAAGCAGCTAATGAGTATCTGAACCAAACGAGGGTGCTATACAGTTTCATGACCCCATTTGTGTCCAAGAACCCAAGGAGCGCTTTCTTGAACTATAGGGACCTTGACATTGGTATTAACACATTTGGGAAGGATAGATATGAACAGGGGAAGGTTTATGGATTGAAGTACTTCAATGACAATTTCTATAGGTTGGTGAAGGTGAAGACTGCTGTGGATCCAGAAAATTTCTTCAGGAATGAGCAAAGTATCCCACCTCTTCCAAGAAAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

512

Amino Acids

57.04

Weight (kDa)

9.36

Isoelectric Point (pI)

36.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	77 - 155	4.8e-09	FAD binding domain
BBE	PF08031	448 - 505	1.7e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	732
Acc65I	GGTACC	1 cut(s)	670
AccB1I	GGYRCC	1 cut(s)	670
AccB7I	CCANNNNNTGG	1 cut(s)	68
AccI	GTMKAC	1 cut(s)	78
AccII	CGCG	1 cut(s)	1084
AciI	CCGC	7 cut(s)	187, 315, 318, 480, 483, 618, 621
AclWI	GGATC	4 cut(s)	848, 959, 1472, 1485
AcsI	RAATTY	2 cut(s)	463, 1486
AcuI	CTGAAG	2 cut(s)	105, 1477
AcyI	GRCGYC	2 cut(s)	294, 729
AfaI	GTAC	8 cut(s)	39, 456, 509, 650, 672, 763, 1232, 1430
AfeI	AGCGCT	1 cut(s)	1342
AfiI	CCNNNNNNNGG	8 cut(s)	68, 262, 444, 476, 914, 966, 1157, 1291
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	2 cut(s)	261, 432
AjuI	GAANNNNNNNTTGG	4 cut(s)	55, 87, 1121, 1153
AloI	GAACNNNNNNTCC	4 cut(s)	581, 613, 964, 996
AluBI	AGCT	7 cut(s)	301, 420, 443, 565, 630, 880, 1268
AluI	AGCT	7 cut(s)	301, 420, 443, 565, 630, 880, 1268
Alw21I	GWGCWC	1 cut(s)	445
Alw26I	GTCTC	1 cut(s)	352
AlwI	GGATC	4 cut(s)	848, 959, 1472, 1485
Aor51HI	AGCGCT	1 cut(s)	1342
AoxI	GGCC	7 cut(s)	264, 429, 435, 511, 603, 852, 1179
ApaI	GGGCCC	1 cut(s)	433
ApeKI	GCWGC	2 cut(s)	796, 1265
ApoI	RAATTY	2 cut(s)	463, 1486
ArsI	GACNNNNNNTTYG	2 cut(s)	1063, 1095
AseI	ATTAAT	1 cut(s)	542
Asp700I	GAANNNNTTC	1 cut(s)	1430
Asp718I	GGTACC	1 cut(s)	670
AspLEI	GCGC	3 cut(s)	281, 1192, 1343
AspS9I	GGNCC	5 cut(s)	429, 430, 603, 853, 1360
AsuC2I	CCSGG	1 cut(s)	1205
AsuHPI	GGTGA	7 cut(s)	48, 814, 836, 988, 1193, 1468, 1474
AvaII	GGWCC	1 cut(s)	1360
BaeGI	GKGCMC	1 cut(s)	433
BamHI	GGATCC	1 cut(s)	1477
BanI	GGYRCC	1 cut(s)	670
BanII	GRGCYC	2 cut(s)	433, 445
BbsI	GAAGAC	3 cut(s)	480, 1136, 1472
Bbv12I	GWGCWC	1 cut(s)	445
BbvI	GCAGC	2 cut(s)	808, 1277
BccI	CCATC	4 cut(s)	614, 764, 971, 1111
BceAI	ACGGC	3 cut(s)	493, 503, 526
BciT130I	CCWGG	2 cut(s)	263, 434
BciVI	GTATCC	1 cut(s)	1520
BcnI	CCSGG	1 cut(s)	1205
BcoDI	GTCTC	1 cut(s)	352
BfaI	CTAG	1 cut(s)	569
BfmI	CTRYAG	3 cut(s)	458, 1354, 1447
BfoI	RGCGCY	1 cut(s)	1344
BfuI	GTATCC	1 cut(s)	1520
BisI	GCNGC	5 cut(s)	316, 481, 619, 797, 1266
BlsI	GCNGC	5 cut(s)	317, 482, 620, 798, 1267
BmcAI	AGTACT	2 cut(s)	1232, 1430
Bme1390I	CCNGG	3 cut(s)	263, 434, 1205
Bme18I	GGWCC	1 cut(s)	1360
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	5 cut(s)	429, 430, 603, 853, 1360
BmiI	GGNNCC	6 cut(s)	431, 666, 672, 756, 1361, 1479
BmrFI	CCNGG	3 cut(s)	263, 434, 1205
BmrI	ACTGGG	1 cut(s)	850
BmsI	GCATC	2 cut(s)	526, 1177
BmuI	ACTGGG	1 cut(s)	850
BpiI	GAAGAC	3 cut(s)	480, 1136, 1472
BplI	GAGNNNNNCTC	2 cut(s)	323, 355
BpuMI	CCSGG	1 cut(s)	1205
BsaBI	GATNNNNATC	1 cut(s)	137
BsaHI	GRCGYC	2 cut(s)	294, 729
BsaJI	CCNNGG	4 cut(s)	432, 960, 1182, 1334
BsaWI	WCCGGW	3 cut(s)	390, 410, 667
BsaXI	ACNNNNNCTCC	8 cut(s)	43, 73, 581, 611, 627, 657, 1088, 1118
Bsc4I	CCNNNNNNNGG	8 cut(s)	68, 262, 444, 476, 914, 966, 1157, 1291
Bse118I	RCCGGY	1 cut(s)	799
Bse1I	ACTGG	3 cut(s)	224, 856, 1138
Bse3DI	GCAATG	1 cut(s)	874
Bse8I	GATNNNNATC	1 cut(s)	137
BseBI	CCWGG	2 cut(s)	263, 434
BseDI	CCNNGG	4 cut(s)	432, 960, 1182, 1334
BseGI	GGATG	7 cut(s)	138, 183, 231, 541, 775, 786, 1192
BseJI	GATNNNNATC	1 cut(s)	137
BseLI	CCNNNNNNNGG	8 cut(s)	68, 262, 444, 476, 914, 966, 1157, 1291
BseMI	GCAATG	1 cut(s)	874
BseMII	CTCAG	3 cut(s)	187, 756, 1184
BseNI	ACTGG	3 cut(s)	224, 856, 1138
BseRI	GAGGAG	1 cut(s)	35
BseSI	GKGCMC	1 cut(s)	433
BseXI	GCAGC	2 cut(s)	808, 1277
BseYI	CCCAGC	1 cut(s)	1208
BsgI	GTGCAG	1 cut(s)	815
Bsh1236I	CGCG	1 cut(s)	1084
BshFI	GGCC	7 cut(s)	266, 431, 437, 513, 605, 854, 1181
BshNI	GGYRCC	1 cut(s)	670
BsiHKAI	GWGCWC	1 cut(s)	445
BsiSI	CCGG	6 cut(s)	391, 411, 438, 668, 800, 1204
BslFI	GGGAC	2 cut(s)	238, 1373
BslI	CCNNNNNNNGG	8 cut(s)	68, 262, 444, 476, 914, 966, 1157, 1291
BsmAI	GTCTC	1 cut(s)	352
BsmFI	GGGAC	2 cut(s)	238, 1373
BsnI	GGCC	7 cut(s)	266, 431, 437, 513, 605, 854, 1181
Bsp120I	GGGCCC	1 cut(s)	429
Bsp1286I	GDGCHC	2 cut(s)	433, 445
Bsp143I	GATC	4 cut(s)	639, 840, 951, 1477
Bsp68I	TCGCGA	1 cut(s)	1084
BspACI	CCGC	7 cut(s)	187, 315, 318, 480, 483, 618, 621
BspANI	GGCC	7 cut(s)	266, 431, 437, 513, 605, 854, 1181
BspCNI	CTCAG	3 cut(s)	186, 757, 1183
BspFNI	CGCG	1 cut(s)	1084
BspHI	TCATGA	1 cut(s)	1308
BspLI	GGNNCC	6 cut(s)	431, 666, 672, 756, 1361, 1479
BspPI	GGATC	4 cut(s)	848, 959, 1472, 1485
BspT107I	GGYRCC	1 cut(s)	670
BsrDI	GCAATG	1 cut(s)	874
BsrFI	RCCGGY	1 cut(s)	799
BsrI	ACTGG	3 cut(s)	224, 856, 1138
BssAI	RCCGGY	1 cut(s)	799
BssECI	CCNNGG	4 cut(s)	432, 960, 1182, 1334
BssMI	GATC	4 cut(s)	639, 840, 951, 1477
BssNI	GRCGYC	2 cut(s)	294, 729
BssT1I	CCWWGG	1 cut(s)	1334
Bst2UI	CCWGG	2 cut(s)	263, 434
Bst4CI	ACNGT	6 cut(s)	454, 682, 688, 835, 935, 1304
Bst6I	CTCTTC	4 cut(s)	31, 124, 1043, 1524
BstACI	GRCGYC	2 cut(s)	294, 729
BstDEI	CTNAG	4 cut(s)	173, 500, 765, 1170
BstDSI	CCRYGG	1 cut(s)	960
BstENI	CCTNNNNNAGG	1 cut(s)	1155
BstF5I	GGATG	7 cut(s)	138, 183, 231, 541, 775, 786, 1192
BstFNI	CGCG	1 cut(s)	1084
BstH2I	RGCGCY	1 cut(s)	1344
BstHHI	GCGC	3 cut(s)	281, 1192, 1343
BstKTI	GATC	4 cut(s)	642, 843, 954, 1480
BstMAI	GTCTC	1 cut(s)	352
BstMBI	GATC	4 cut(s)	639, 840, 951, 1477
BstMWI	GCNNNNNNNGC	4 cut(s)	13, 195, 627, 1187
BstNI	CCWGG	2 cut(s)	263, 434
BstSCI	CCNGG	3 cut(s)	261, 432, 1203
BstSFI	CTRYAG	3 cut(s)	458, 1354, 1447
BstSLI	GKGCMC	1 cut(s)	433
BstUI	CGCG	1 cut(s)	1084
BstV1I	GCAGC	2 cut(s)	808, 1277
BstV2I	GAAGAC	3 cut(s)	480, 1136, 1472
BstX2I	RGATCY	2 cut(s)	840, 1477
BstYI	RGATCY	2 cut(s)	840, 1477
BsuI	GTATCC	1 cut(s)	1520
BsuRI	GGCC	7 cut(s)	266, 431, 437, 513, 605, 854, 1181
BtgI	CCRYGG	1 cut(s)	960
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	7 cut(s)	138, 183, 231, 541, 775, 786, 1192
BtsIMutI	CAGTG	1 cut(s)	693
BtuMI	TCGCGA	1 cut(s)	1084
CciI	TCATGA	1 cut(s)	1308
CfoI	GCGC	3 cut(s)	281, 1192, 1343
Cfr10I	RCCGGY	1 cut(s)	799
Cfr13I	GGNCC	5 cut(s)	429, 430, 603, 853, 1360
CseI	GACGC	1 cut(s)	283
Csp6I	GTAC	8 cut(s)	38, 455, 508, 649, 671, 762, 1231, 1429
CviAII	CATG	2 cut(s)	1034, 1309
CviQI	GTAC	8 cut(s)	38, 455, 508, 649, 671, 762, 1231, 1429
DdeI	CTNAG	4 cut(s)	173, 500, 765, 1170
DpnI	GATC	4 cut(s)	641, 842, 953, 1479
DpnII	GATC	4 cut(s)	639, 840, 951, 1477
Eam1104I	CTCTTC	4 cut(s)	31, 124, 1043, 1524
EarI	CTCTTC	4 cut(s)	31, 124, 1043, 1524
EciI	GGCGGA	2 cut(s)	333, 636
Ecl136II	GAGCTC	1 cut(s)	443
Eco130I	CCWWGG	1 cut(s)	1334
Eco147I	AGGCCT	1 cut(s)	266
Eco24I	GRGCYC	2 cut(s)	433, 445
Eco47I	GGWCC	1 cut(s)	1360
Eco47III	AGCGCT	1 cut(s)	1342
Eco53kI	GAGCTC	1 cut(s)	443
Eco57I	CTGAAG	2 cut(s)	105, 1477
EcoICRI	GAGCTC	1 cut(s)	443
EcoNI	CCTNNNNNAGG	1 cut(s)	1155
EcoO109I	RGGNCCY	1 cut(s)	1360
EcoRII	CCWGG	2 cut(s)	261, 432
EcoT14I	CCWWGG	1 cut(s)	1334
EcoT22I	ATGCAT	1 cut(s)	541
EcoT38I	GRGCYC	2 cut(s)	433, 445
ErhI	CCWWGG	1 cut(s)	1334
FaeI	CATG	2 cut(s)	1037, 1312
FalI	AAGNNNNNCTT	4 cut(s)	1121, 1153, 1327, 1359
FaqI	GGGAC	2 cut(s)	238, 1373
FatI	CATG	2 cut(s)	1033, 1308
FauNDI	CATATG	1 cut(s)	343
FblI	GTMKAC	1 cut(s)	78
Fnu4HI	GCNGC	5 cut(s)	316, 481, 619, 797, 1266
FokI	GGATG	7 cut(s)	125, 170, 218, 548, 782, 793, 1199
FriOI	GRGCYC	2 cut(s)	433, 445
Fsp4HI	GCNGC	5 cut(s)	316, 481, 619, 797, 1266
FspBI	CTAG	1 cut(s)	569
GlaI	GCGC	3 cut(s)	280, 1191, 1342
GluI	GCNGC	5 cut(s)	316, 481, 619, 797, 1266
GsaI	CCCAGC	1 cut(s)	1212
HaeII	RGCGCY	1 cut(s)	1344
HaeIII	GGCC	7 cut(s)	266, 431, 437, 513, 605, 854, 1181
HapII	CCGG	6 cut(s)	391, 411, 438, 668, 800, 1204
HgaI	GACGC	1 cut(s)	283
HhaI	GCGC	3 cut(s)	281, 1192, 1343
Hin1I	GRCGYC	2 cut(s)	294, 729
Hin1II	CATG	2 cut(s)	1037, 1312
Hin6I	GCGC	3 cut(s)	279, 1190, 1341
HinP1I	GCGC	3 cut(s)	279, 1190, 1341
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HindIII	AAGCTT	2 cut(s)	563, 628
HinfI	GANTC	7 cut(s)	214, 251, 336, 956, 985, 1007, 1225
HpaII	CCGG	6 cut(s)	391, 411, 438, 668, 800, 1204
HphI	GGTGA	7 cut(s)	48, 814, 836, 988, 1193, 1468, 1474
Hpy166II	GTNNAC	3 cut(s)	79, 406, 762
Hpy188I	TCNGA	8 cut(s)	176, 311, 447, 611, 1060, 1173, 1186, 1281
Hpy8I	GTNNAC	3 cut(s)	79, 406, 762
Hpy99I	CGWCG	3 cut(s)	86, 731, 734
HpyAV	CCTTC	6 cut(s)	165, 742, 814, 1384, 1405, 1453
HpyCH4III	ACNGT	6 cut(s)	454, 682, 688, 835, 935, 1304
HpyCH4IV	ACGT	4 cut(s)	258, 402, 729, 993
HpyCH4V	TGCA	4 cut(s)	539, 796, 1037, 1253
HpyF10VI	GCNNNNNNNGC	4 cut(s)	13, 195, 627, 1187
HpyF3I	CTNAG	4 cut(s)	173, 500, 765, 1170
HpySE526I	ACGT	4 cut(s)	258, 402, 729, 993
Hsp92I	GRCGYC	2 cut(s)	294, 729
Hsp92II	CATG	2 cut(s)	1037, 1312
HspAI	GCGC	3 cut(s)	279, 1190, 1341
KpnI	GGTACC	1 cut(s)	674
Kzo9I	GATC	4 cut(s)	639, 840, 951, 1477
LmnI	GCTCC	5 cut(s)	425, 440, 712, 760, 1338
Lsp1109I	GCAGC	2 cut(s)	808, 1277
LweI	GCATC	2 cut(s)	526, 1177
MaeI	CTAG	1 cut(s)	569
MaeII	ACGT	4 cut(s)	258, 402, 729, 993
MaeIII	GTNAC	3 cut(s)	682, 704, 994
MalI	GATC	4 cut(s)	641, 842, 953, 1479
MboI	GATC	4 cut(s)	639, 840, 951, 1477
MflI	RGATCY	2 cut(s)	840, 1477
MhlI	GDGCHC	2 cut(s)	433, 445
MluCI	AATT	5 cut(s)	463, 543, 911, 1441, 1486
MlyI	GAGTC	5 cut(s)	208, 260, 965, 979, 1016
MmeI	TCCRAC	4 cut(s)	86, 836, 929, 1074
Mph1103I	ATGCAT	1 cut(s)	541
MroXI	GAANNNNTTC	1 cut(s)	1430
MseI	TTAA	5 cut(s)	542, 549, 1029, 1221, 1377
MspI	CCGG	6 cut(s)	391, 411, 438, 668, 800, 1204
MspR9I	CCNGG	3 cut(s)	263, 434, 1205
MvaI	CCWGG	2 cut(s)	263, 434
MvnI	CGCG	1 cut(s)	1084
MwoI	GCNNNNNNNGC	4 cut(s)	13, 195, 627, 1187
NciI	CCSGG	1 cut(s)	1205
NdeI	CATATG	1 cut(s)	343
NdeII	GATC	4 cut(s)	639, 840, 951, 1477
NlaIII	CATG	2 cut(s)	1037, 1312
NlaIV	GGNNCC	6 cut(s)	431, 666, 672, 756, 1361, 1479
NmeAIII	GCCGAG	1 cut(s)	270
NmuCI	GTSAC	1 cut(s)	994
NruI	TCGCGA	1 cut(s)	1084
NsiI	ATGCAT	1 cut(s)	541
PagI	TCATGA	1 cut(s)	1308
PceI	AGGCCT	1 cut(s)	266
PcsI	WCGNNNNNNNCGW	3 cut(s)	87, 516, 726
PdmI	GAANNNNTTC	1 cut(s)	1430
PfeI	GAWTC	2 cut(s)	336, 1225
PflMI	CCANNNNNTGG	1 cut(s)	68
PkrI	GCNGC	5 cut(s)	317, 482, 620, 798, 1267
PleI	GAGTC	5 cut(s)	208, 259, 964, 979, 1015
PpsI	GAGTC	5 cut(s)	208, 259, 964, 979, 1015
PpuMI	RGGWCCY	1 cut(s)	1360
PshBI	ATTAAT	1 cut(s)	542
Psp124BI	GAGCTC	1 cut(s)	445
Psp5II	RGGWCCY	1 cut(s)	1360
Psp6I	CCWGG	2 cut(s)	261, 432
PspFI	CCCAGC	1 cut(s)	1208
PspGI	CCWGG	2 cut(s)	261, 432
PspN4I	GGNNCC	6 cut(s)	431, 666, 672, 756, 1361, 1479
PspOMI	GGGCCC	1 cut(s)	429
PspPI	GGNCC	5 cut(s)	429, 430, 603, 853, 1360
PspPPI	RGGWCCY	1 cut(s)	1360
PsuI	RGATCY	2 cut(s)	840, 1477
RruI	TCGCGA	1 cut(s)	1084
RsaI	GTAC	8 cut(s)	39, 456, 509, 650, 672, 763, 1232, 1430
RsaNI	GTAC	8 cut(s)	38, 455, 508, 649, 671, 762, 1231, 1429
SacI	GAGCTC	1 cut(s)	445
SaqAI	TTAA	5 cut(s)	542, 549, 1029, 1221, 1377
SatI	GCNGC	5 cut(s)	316, 481, 619, 797, 1266
Sau3AI	GATC	4 cut(s)	639, 840, 951, 1477
Sau96I	GGNCC	5 cut(s)	429, 430, 603, 853, 1360
ScaI	AGTACT	2 cut(s)	1232, 1430
SchI	GAGTC	5 cut(s)	208, 260, 965, 979, 1016
ScrFI	CCNGG	3 cut(s)	263, 434, 1205
SduI	GDGCHC	2 cut(s)	433, 445
SfaNI	GCATC	2 cut(s)	526, 1177
SfcI	CTRYAG	3 cut(s)	458, 1354, 1447
SinI	GGWCC	1 cut(s)	1360
Sse9I	AATT	5 cut(s)	463, 543, 911, 1441, 1486
SseBI	AGGCCT	1 cut(s)	266
SsiI	CCGC	7 cut(s)	187, 315, 318, 480, 483, 618, 621
SspMI	CTAG	1 cut(s)	569
SstI	GAGCTC	1 cut(s)	445
StuI	AGGCCT	1 cut(s)	266
StyD4I	CCNGG	3 cut(s)	261, 432, 1203
StyI	CCWWGG	1 cut(s)	1334
TaaI	ACNGT	6 cut(s)	454, 682, 688, 835, 935, 1304
TaiI	ACGT	4 cut(s)	261, 405, 732, 996
TaqI	TCGA	5 cut(s)	350, 845, 954, 983, 1021
TasI	AATT	5 cut(s)	463, 543, 911, 1441, 1486
TatI	WGTACW	5 cut(s)	37, 454, 761, 1230, 1428
TauI	GCSGC	3 cut(s)	318, 483, 621
TfiI	GAWTC	2 cut(s)	336, 1225
Tru1I	TTAA	5 cut(s)	542, 549, 1029, 1221, 1377
Tru9I	TTAA	5 cut(s)	542, 549, 1029, 1221, 1377
TscAI	CASTG	1 cut(s)	693
TseFI	GTSAC	1 cut(s)	994
TseI	GCWGC	2 cut(s)	796, 1265
Tsp45I	GTSAC	1 cut(s)	994
TspDTI	ATGAA	3 cut(s)	355, 1297, 1416
TspGWI	ACGGA	3 cut(s)	412, 747, 949
TspRI	CASTG	1 cut(s)	693
Van91I	CCANNNNNTGG	1 cut(s)	68
VpaK11BI	GGWCC	1 cut(s)	1360
VspI	ATTAAT	1 cut(s)	542
XagI	CCTNNNNNAGG	1 cut(s)	1155
XapI	RAATTY	2 cut(s)	463, 1486
XbaI	TCTAGA	1 cut(s)	568
XmiI	GTMKAC	1 cut(s)	78
XmnI	GAANNNNTTC	1 cut(s)	1430
XspI	CTAG	1 cut(s)	569
ZraI	GACGTC	1 cut(s)	730
ZrmI	AGTACT	2 cut(s)	1232, 1430
Zsp2I	ATGCAT	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.