Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Reverse (-)

12918535 .. 12920393

Gene Structure 1859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G011370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGTCGCACATTACGCTTATTCTCTCTTCTGTTATTGTCCTTCTCCTCTCCACTTCACCTCCAACCTCTGGTTTTGTCTACGACGACTTCGTTCAATGCCTGAACACCCACCCTAACTCCTCAGACACCAAGATAGTCATCCCCCAAAACAACCCTTCTTTCACTTCAACTCTCAGAGCCTACATCCGCAACTCTCGCTTCAACACCTCCACGACTCCAAAACCAGTCCTCATCCTCACGCCAACGACCGAGTTCCACGTCCAGGCCTCCGTCCTCTGCGCCAAGAAACTCGGCGTCCAGCTCAAAATTCGAAGCGGCGGACACGACTACGAGGGAATCTCATATGTCTCGACTGAACAGAGTTTCATAGTCCTTGATATGTTCAACCTCCGGTCAATCAACGTCAACACCGGAGACAGCTCCGTGTGGGCCCAGGCCGGAGCCACTCTCGGAGAACTGTACTACAGAATTTCCCAGAAGAGTAAACTGCTAGCCTTTCCTGCCGGAATTTGTCCCACGGTAGGTGTCGGTGGACACGTTAGCGGCGGCGGTTATGGAAACTTACTAAGGAAGTACGGCCTTGCCGTCGATAATGTATTGGATGCATTAGTTGTTAATGTGAATGGGAAGCTTCTGGATCGAAAATCAATGGGGGAGGATTTGTTCTGGGCCATCAGAGGAAGCGGCGGAGGAAGCTTTGGAGTGATCGTGTCATACAAGTTGAGGTTGGTTCCGGTACCTGAAACGGCTACAGTGTTCAGGGTTATGCGTTACTTGGAGCAGAACGCAACCGACGTCGTTTTGATGTGGCAGAAGGTGGCTCCGTGTACTGATGATGGTTTATGGATGAGGGTGTTGGTGCAGCCGGTGAGTTCTCCAACCAAGAAGGGTGAGAAAACTGTTAGGATCTCGATTTTGGCACAGTTTTTAGGCAATGCTAATAAGCTGGTTTCCATGTTGGGTAAACAGTTTCCTGAATTGGGTTTGAAGAAAGAGGACTGTTTGGAAATGAGTTGGATCGAGTCCGTGGTTTGGTGGAACGATGGTTCGGCTCCCAACGTCACCAAACCAGAGTCTTTGCTCAATCGAAACCTTAACCATGCGAGTTTCTTGAAGAGGAAGTCAGATTATGTCCAGACCCCGATTTCGCGAGAGGGGTTGGAGGCATTGTGGAAGAAGTTGATGGAAGTTGGGAAGACTGGCTTGGTATTCAATCCTTACGGAGGGAAAATGGCTCAGATTTCGGCCTCGGATGCGCCTTTTCCTCACCGGGCTGGGAACTTGTTTAAGATTCAGTACTCGGTGGGGTGGAATATAGCAGGAGAGGAAGCAGCTAATGAGTATCTGAACCAAACGAGGGTGCTATACAGTTTCATGACCCCATTTGTGTCCAAGAACCCAAGGAGTGCTTTCTTGAACTATAGGGACCTTGACATTGGTGTTAACACATTTGGGAAGGATAGATATGAACAGGGGAAGGTTTATGGATTGAAGTACTTCAATGACAATTTCTATAGGTTGGTGAAGGTGAAGACTGCTGTGGATCCAGAAAATTTCTTCAGGAATGAGCAAAGTATCCCACCTCTTCCAAGAAAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

533

Amino Acids

59.25

Weight (kDa)

9.33

Isoelectric Point (pI)

32.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	77 - 212	4.5e-24	FAD binding domain
BBE	PF08031	470 - 527	1.8e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	798
Acc65I	GGTACC	1 cut(s)	736
AccB1I	GGYRCC	1 cut(s)	736
AccB7I	CCANNNNNTGG	1 cut(s)	68
AccI	GTMKAC	1 cut(s)	78
AccII	CGCG	1 cut(s)	1150
AciI	CCGC	8 cut(s)	187, 315, 318, 543, 546, 549, 684, 687
AclWI	GGATC	5 cut(s)	645, 914, 1025, 1538, 1551
AcsI	RAATTY	4 cut(s)	306, 468, 507, 1552
AcuI	CTGAAG	1 cut(s)	1543
AcyI	GRCGYC	2 cut(s)	294, 795
AfaI	GTAC	6 cut(s)	461, 575, 738, 829, 1298, 1496
AfiI	CCNNNNNNNGG	7 cut(s)	68, 262, 521, 980, 1032, 1223, 1357
AflIII	ACRYGT	1 cut(s)	535
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	2 cut(s)	261, 432
AjuI	GAANNNNNNNTTGG	2 cut(s)	1187, 1219
AloI	GAACNNNNNNTCC	4 cut(s)	647, 679, 1030, 1062
AluBI	AGCT	6 cut(s)	301, 420, 631, 696, 946, 1334
AluI	AGCT	6 cut(s)	301, 420, 631, 696, 946, 1334
Alw26I	GTCTC	2 cut(s)	352, 408
AlwI	GGATC	5 cut(s)	645, 914, 1025, 1538, 1551
AoxI	GGCC	6 cut(s)	264, 429, 435, 577, 669, 1245
ApaI	GGGCCC	1 cut(s)	433
ApeKI	GCWGC	2 cut(s)	862, 1331
ApoI	RAATTY	4 cut(s)	306, 468, 507, 1552
ArsI	GACNNNNNNTTYG	2 cut(s)	1129, 1161
Asp700I	GAANNNNTTC	1 cut(s)	1496
Asp718I	GGTACC	1 cut(s)	736
AspLEI	GCGC	2 cut(s)	281, 1258
AspS9I	GGNCC	4 cut(s)	429, 430, 669, 1426
AsuC2I	CCSGG	1 cut(s)	1271
AsuHPI	GGTGA	7 cut(s)	48, 880, 902, 1054, 1259, 1534, 1540
AsuII	TTCGAA	1 cut(s)	310
AsuNHI	GCTAGC	1 cut(s)	490
AvaII	GGWCC	1 cut(s)	1426
BaeGI	GKGCMC	1 cut(s)	433
BamHI	GGATCC	1 cut(s)	1543
BanI	GGYRCC	1 cut(s)	736
BanII	GRGCYC	1 cut(s)	433
BbsI	GAAGAC	2 cut(s)	1202, 1538
BbvI	GCAGC	2 cut(s)	874, 1343
BccI	CCATC	4 cut(s)	680, 830, 1037, 1177
BceAI	ACGGC	3 cut(s)	569, 592, 762
BciT130I	CCWGG	2 cut(s)	263, 434
BciVI	GTATCC	1 cut(s)	1586
BcnI	CCSGG	1 cut(s)	1271
BcoDI	GTCTC	2 cut(s)	352, 408
BfaI	CTAG	1 cut(s)	491
BfmI	CTRYAG	4 cut(s)	463, 750, 1420, 1513
BfuI	GTATCC	1 cut(s)	1586
BisI	GCNGC	6 cut(s)	316, 544, 547, 685, 863, 1332
BlsI	GCNGC	6 cut(s)	317, 545, 548, 686, 864, 1333
BmcAI	AGTACT	2 cut(s)	1298, 1496
Bme1390I	CCNGG	3 cut(s)	263, 434, 1271
Bme18I	GGWCC	1 cut(s)	1426
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	4 cut(s)	429, 430, 669, 1426
BmiI	GGNNCC	8 cut(s)	431, 442, 732, 738, 822, 1053, 1427, 1545
BmrFI	CCNGG	3 cut(s)	263, 434, 1271
BmsI	GCATC	2 cut(s)	592, 1243
BmtI	GCTAGC	1 cut(s)	494
BpiI	GAAGAC	2 cut(s)	1202, 1538
BplI	GAGNNNNNCTC	4 cut(s)	323, 355, 432, 464
Bpu14I	TTCGAA	1 cut(s)	310
BpuMI	CCSGG	1 cut(s)	1271
BsaBI	GATNNNNATC	1 cut(s)	137
BsaHI	GRCGYC	2 cut(s)	294, 795
BsaJI	CCNNGG	5 cut(s)	432, 516, 1026, 1248, 1400
BsaWI	WCCGGW	3 cut(s)	390, 410, 733
Bsc4I	CCNNNNNNNGG	7 cut(s)	68, 262, 521, 980, 1032, 1223, 1357
Bse118I	RCCGGY	1 cut(s)	865
Bse1I	ACTGG	2 cut(s)	224, 1204
Bse3DI	GCAATG	1 cut(s)	940
Bse8I	GATNNNNATC	1 cut(s)	137
BseBI	CCWGG	2 cut(s)	263, 434
BseDI	CCNNGG	5 cut(s)	432, 516, 1026, 1248, 1400
BseGI	GGATG	6 cut(s)	138, 183, 231, 607, 852, 1258
BseJI	GATNNNNATC	1 cut(s)	137
BseLI	CCNNNNNNNGG	7 cut(s)	68, 262, 521, 980, 1032, 1223, 1357
BseMI	GCAATG	1 cut(s)	940
BseMII	CTCAG	3 cut(s)	135, 187, 1250
BseNI	ACTGG	2 cut(s)	224, 1204
BseRI	GAGGAG	2 cut(s)	35, 109
BseSI	GKGCMC	1 cut(s)	433
BseXI	GCAGC	2 cut(s)	874, 1343
BseYI	CCCAGC	1 cut(s)	1274
BsgI	GTGCAG	1 cut(s)	881
Bsh1236I	CGCG	1 cut(s)	1150
Bsh1285I	CGRYCG	1 cut(s)	249
BshFI	GGCC	6 cut(s)	266, 431, 437, 579, 671, 1247
BshNI	GGYRCC	1 cut(s)	736
BsiEI	CGRYCG	1 cut(s)	249
BsiSI	CCGG	7 cut(s)	391, 411, 438, 504, 734, 866, 1270
BslFI	GGGAC	2 cut(s)	498, 1439
BslI	CCNNNNNNNGG	7 cut(s)	68, 262, 521, 980, 1032, 1223, 1357
BsmAI	GTCTC	2 cut(s)	352, 408
BsmFI	GGGAC	2 cut(s)	498, 1439
BsnI	GGCC	6 cut(s)	266, 431, 437, 579, 671, 1247
Bsp119I	TTCGAA	1 cut(s)	310
Bsp120I	GGGCCC	1 cut(s)	429
Bsp1286I	GDGCHC	1 cut(s)	433
Bsp143I	GATC	5 cut(s)	637, 705, 906, 1017, 1543
Bsp68I	TCGCGA	1 cut(s)	1150
BspACI	CCGC	8 cut(s)	187, 315, 318, 543, 546, 549, 684, 687
BspANI	GGCC	6 cut(s)	266, 431, 437, 579, 671, 1247
BspCNI	CTCAG	3 cut(s)	134, 186, 1249
BspFNI	CGCG	1 cut(s)	1150
BspHI	TCATGA	1 cut(s)	1374
BspLI	GGNNCC	8 cut(s)	431, 442, 732, 738, 822, 1053, 1427, 1545
BspOI	GCTAGC	1 cut(s)	494
BspPI	GGATC	5 cut(s)	645, 914, 1025, 1538, 1551
BspT104I	TTCGAA	1 cut(s)	310
BspT107I	GGYRCC	1 cut(s)	736
BsrDI	GCAATG	1 cut(s)	940
BsrFI	RCCGGY	1 cut(s)	865
BsrI	ACTGG	2 cut(s)	224, 1204
BssAI	RCCGGY	1 cut(s)	865
BssECI	CCNNGG	5 cut(s)	432, 516, 1026, 1248, 1400
BssMI	GATC	5 cut(s)	637, 705, 906, 1017, 1543
BssNI	GRCGYC	2 cut(s)	294, 795
BssT1I	CCWWGG	1 cut(s)	1400
Bst2UI	CCWGG	2 cut(s)	263, 434
Bst4CI	ACNGT	8 cut(s)	459, 520, 754, 901, 924, 969, 1001, 1370
Bst6I	CTCTTC	4 cut(s)	31, 473, 1109, 1590
BstACI	GRCGYC	2 cut(s)	294, 795
BstBI	TTCGAA	1 cut(s)	310
BstC8I	GCNNGC	1 cut(s)	492
BstDEI	CTNAG	4 cut(s)	121, 173, 566, 1236
BstDSI	CCRYGG	2 cut(s)	516, 1026
BstENI	CCTNNNNNAGG	1 cut(s)	1221
BstF5I	GGATG	6 cut(s)	138, 183, 231, 607, 852, 1258
BstFNI	CGCG	1 cut(s)	1150
BstHHI	GCGC	2 cut(s)	281, 1258
BstKTI	GATC	5 cut(s)	640, 708, 909, 1020, 1546
BstMAI	GTCTC	2 cut(s)	352, 408
BstMBI	GATC	5 cut(s)	637, 705, 906, 1017, 1543
BstMCI	CGRYCG	1 cut(s)	249
BstMWI	GCNNNNNNNGC	5 cut(s)	13, 195, 500, 693, 1253
BstNI	CCWGG	2 cut(s)	263, 434
BstSCI	CCNGG	3 cut(s)	261, 432, 1269
BstSFI	CTRYAG	4 cut(s)	463, 750, 1420, 1513
BstSLI	GKGCMC	1 cut(s)	433
BstUI	CGCG	1 cut(s)	1150
BstV1I	GCAGC	2 cut(s)	874, 1343
BstV2I	GAAGAC	2 cut(s)	1202, 1538
BstX2I	RGATCY	2 cut(s)	906, 1543
BstYI	RGATCY	2 cut(s)	906, 1543
BsuI	GTATCC	1 cut(s)	1586
BsuRI	GGCC	6 cut(s)	266, 431, 437, 579, 671, 1247
BtgI	CCRYGG	2 cut(s)	516, 1026
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	6 cut(s)	138, 183, 231, 607, 852, 1258
BtsIMutI	CAGTG	1 cut(s)	759
BtuMI	TCGCGA	1 cut(s)	1150
Cac8I	GCNNGC	1 cut(s)	492
CciI	TCATGA	1 cut(s)	1374
CfoI	GCGC	2 cut(s)	281, 1258
Cfr10I	RCCGGY	1 cut(s)	865
Cfr13I	GGNCC	4 cut(s)	429, 430, 669, 1426
CseI	GACGC	1 cut(s)	283
Csp6I	GTAC	6 cut(s)	460, 574, 737, 828, 1297, 1495
CviAII	CATG	3 cut(s)	955, 1100, 1375
CviQI	GTAC	6 cut(s)	460, 574, 737, 828, 1297, 1495
DdeI	CTNAG	4 cut(s)	121, 173, 566, 1236
DpnI	GATC	5 cut(s)	639, 707, 908, 1019, 1545
DpnII	GATC	5 cut(s)	637, 705, 906, 1017, 1543
Eam1104I	CTCTTC	4 cut(s)	31, 473, 1109, 1590
EarI	CTCTTC	4 cut(s)	31, 473, 1109, 1590
EciI	GGCGGA	2 cut(s)	333, 702
Eco130I	CCWWGG	1 cut(s)	1400
Eco147I	AGGCCT	1 cut(s)	266
Eco24I	GRGCYC	1 cut(s)	433
Eco47I	GGWCC	1 cut(s)	1426
Eco57I	CTGAAG	1 cut(s)	1543
EcoNI	CCTNNNNNAGG	1 cut(s)	1221
EcoO109I	RGGNCCY	1 cut(s)	1426
EcoRII	CCWGG	2 cut(s)	261, 432
EcoT14I	CCWWGG	1 cut(s)	1400
EcoT22I	ATGCAT	1 cut(s)	607
EcoT38I	GRGCYC	1 cut(s)	433
ErhI	CCWWGG	1 cut(s)	1400
FaeI	CATG	3 cut(s)	958, 1103, 1378
FalI	AAGNNNNNCTT	4 cut(s)	1187, 1219, 1393, 1425
FaqI	GGGAC	2 cut(s)	498, 1439
FatI	CATG	3 cut(s)	954, 1099, 1374
FauNDI	CATATG	1 cut(s)	343
FblI	GTMKAC	1 cut(s)	78
Fnu4HI	GCNGC	6 cut(s)	316, 544, 547, 685, 863, 1332
FokI	GGATG	6 cut(s)	125, 170, 218, 614, 859, 1265
FriOI	GRGCYC	1 cut(s)	433
Fsp4HI	GCNGC	6 cut(s)	316, 544, 547, 685, 863, 1332
FspBI	CTAG	1 cut(s)	491
GlaI	GCGC	2 cut(s)	280, 1257
GluI	GCNGC	6 cut(s)	316, 544, 547, 685, 863, 1332
GsaI	CCCAGC	1 cut(s)	1278
HaeIII	GGCC	6 cut(s)	266, 431, 437, 579, 671, 1247
HapII	CCGG	7 cut(s)	391, 411, 438, 504, 734, 866, 1270
HgaI	GACGC	1 cut(s)	283
HhaI	GCGC	2 cut(s)	281, 1258
Hin1I	GRCGYC	2 cut(s)	294, 795
Hin1II	CATG	3 cut(s)	958, 1103, 1378
Hin6I	GCGC	2 cut(s)	279, 1256
HinP1I	GCGC	2 cut(s)	279, 1256
HincII	GTYRAC	2 cut(s)	406, 1444
HindII	GTYRAC	2 cut(s)	406, 1444
HindIII	AAGCTT	2 cut(s)	629, 694
HinfI	GANTC	5 cut(s)	214, 336, 1022, 1073, 1291
HpaI	GTTAAC	1 cut(s)	1444
HpaII	CCGG	7 cut(s)	391, 411, 438, 504, 734, 866, 1270
HphI	GGTGA	7 cut(s)	48, 880, 902, 1054, 1259, 1534, 1540
Hpy166II	GTNNAC	7 cut(s)	79, 406, 485, 533, 828, 965, 1444
Hpy188I	TCNGA	8 cut(s)	124, 176, 452, 677, 1126, 1239, 1252, 1347
Hpy8I	GTNNAC	7 cut(s)	79, 406, 485, 533, 828, 965, 1444
Hpy99I	CGWCG	4 cut(s)	86, 590, 797, 800
HpyAV	CCTTC	7 cut(s)	50, 165, 808, 880, 1450, 1471, 1519
HpyCH4III	ACNGT	8 cut(s)	459, 520, 754, 901, 924, 969, 1001, 1370
HpyCH4IV	ACGT	5 cut(s)	258, 402, 537, 795, 1059
HpyCH4V	TGCA	2 cut(s)	605, 862
HpyF10VI	GCNNNNNNNGC	5 cut(s)	13, 195, 500, 693, 1253
HpyF3I	CTNAG	4 cut(s)	121, 173, 566, 1236
HpySE526I	ACGT	5 cut(s)	258, 402, 537, 795, 1059
Hsp92I	GRCGYC	2 cut(s)	294, 795
Hsp92II	CATG	3 cut(s)	958, 1103, 1378
HspAI	GCGC	2 cut(s)	279, 1256
KpnI	GGTACC	1 cut(s)	740
KspAI	GTTAAC	1 cut(s)	1444
Kzo9I	GATC	5 cut(s)	637, 705, 906, 1017, 1543
LmnI	GCTCC	5 cut(s)	425, 440, 778, 826, 1057
Lsp1109I	GCAGC	2 cut(s)	874, 1343
LweI	GCATC	2 cut(s)	592, 1243
MaeI	CTAG	1 cut(s)	491
MaeII	ACGT	5 cut(s)	258, 402, 537, 795, 1059
MaeIII	GTNAC	2 cut(s)	770, 1060
MalI	GATC	5 cut(s)	639, 707, 908, 1019, 1545
MboI	GATC	5 cut(s)	637, 705, 906, 1017, 1543
MboII	GAAGA	9 cut(s)	18, 490, 1000, 1126, 1186, 1207, 1543, 1549, 1577
MflI	RGATCY	2 cut(s)	906, 1543
MhlI	GDGCHC	1 cut(s)	433
MluCI	AATT	6 cut(s)	306, 468, 507, 977, 1507, 1552
MlyI	GAGTC	3 cut(s)	208, 1031, 1082
MmeI	TCCRAC	4 cut(s)	86, 902, 995, 1140
Mph1103I	ATGCAT	1 cut(s)	607
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	4 cut(s)	615, 1095, 1287, 1443
MspI	CCGG	7 cut(s)	391, 411, 438, 504, 734, 866, 1270
MspR9I	CCNGG	3 cut(s)	263, 434, 1271
MvaI	CCWGG	2 cut(s)	263, 434
MvnI	CGCG	1 cut(s)	1150
MwoI	GCNNNNNNNGC	5 cut(s)	13, 195, 500, 693, 1253
NciI	CCSGG	1 cut(s)	1271
NdeI	CATATG	1 cut(s)	343
NdeII	GATC	5 cut(s)	637, 705, 906, 1017, 1543
NheI	GCTAGC	1 cut(s)	490
NlaIII	CATG	3 cut(s)	958, 1103, 1378
NlaIV	GGNNCC	8 cut(s)	431, 442, 732, 738, 822, 1053, 1427, 1545
NmeAIII	GCCGAG	1 cut(s)	270
NmuCI	GTSAC	1 cut(s)	1060
NruI	TCGCGA	1 cut(s)	1150
NsiI	ATGCAT	1 cut(s)	607
NspV	TTCGAA	1 cut(s)	310
PagI	TCATGA	1 cut(s)	1374
PceI	AGGCCT	1 cut(s)	266
PcsI	WCGNNNNNNNCGW	4 cut(s)	87, 534, 582, 792
PdmI	GAANNNNTTC	1 cut(s)	1496
PfeI	GAWTC	2 cut(s)	336, 1291
PflMI	CCANNNNNTGG	1 cut(s)	68
PkrI	GCNGC	6 cut(s)	317, 545, 548, 686, 864, 1333
PleI	GAGTC	3 cut(s)	208, 1030, 1081
PpsI	GAGTC	3 cut(s)	208, 1030, 1081
PpuMI	RGGWCCY	1 cut(s)	1426
Psp5II	RGGWCCY	1 cut(s)	1426
Psp6I	CCWGG	2 cut(s)	261, 432
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	2 cut(s)	261, 432
PspN4I	GGNNCC	8 cut(s)	431, 442, 732, 738, 822, 1053, 1427, 1545
PspOMI	GGGCCC	1 cut(s)	429
PspPI	GGNCC	4 cut(s)	429, 430, 669, 1426
PspPPI	RGGWCCY	1 cut(s)	1426
PsuI	RGATCY	2 cut(s)	906, 1543
RruI	TCGCGA	1 cut(s)	1150
RsaI	GTAC	6 cut(s)	461, 575, 738, 829, 1298, 1496
RsaNI	GTAC	6 cut(s)	460, 574, 737, 828, 1297, 1495
SaqAI	TTAA	4 cut(s)	615, 1095, 1287, 1443
SatI	GCNGC	6 cut(s)	316, 544, 547, 685, 863, 1332
Sau3AI	GATC	5 cut(s)	637, 705, 906, 1017, 1543
Sau96I	GGNCC	4 cut(s)	429, 430, 669, 1426
ScaI	AGTACT	2 cut(s)	1298, 1496
SchI	GAGTC	3 cut(s)	208, 1031, 1082
ScrFI	CCNGG	3 cut(s)	263, 434, 1271
SduI	GDGCHC	1 cut(s)	433
SfaNI	GCATC	2 cut(s)	592, 1243
SfcI	CTRYAG	4 cut(s)	463, 750, 1420, 1513
SfuI	TTCGAA	1 cut(s)	310
SinI	GGWCC	1 cut(s)	1426
Sse9I	AATT	6 cut(s)	306, 468, 507, 977, 1507, 1552
SseBI	AGGCCT	1 cut(s)	266
SsiI	CCGC	8 cut(s)	187, 315, 318, 543, 546, 549, 684, 687
SspMI	CTAG	1 cut(s)	491
StuI	AGGCCT	1 cut(s)	266
StyD4I	CCNGG	3 cut(s)	261, 432, 1269
StyI	CCWWGG	1 cut(s)	1400
TaaI	ACNGT	8 cut(s)	459, 520, 754, 901, 924, 969, 1001, 1370
TaiI	ACGT	5 cut(s)	261, 405, 540, 798, 1062
TaqI	TCGA	7 cut(s)	310, 350, 588, 640, 911, 1020, 1087
TaqII	GACCGA	1 cut(s)	263
TasI	AATT	6 cut(s)	306, 468, 507, 977, 1507, 1552
TatI	WGTACW	4 cut(s)	459, 827, 1296, 1494
TauI	GCSGC	4 cut(s)	318, 546, 549, 687
TfiI	GAWTC	2 cut(s)	336, 1291
Tru1I	TTAA	4 cut(s)	615, 1095, 1287, 1443
Tru9I	TTAA	4 cut(s)	615, 1095, 1287, 1443
TscAI	CASTG	1 cut(s)	759
TseFI	GTSAC	1 cut(s)	1060
TseI	GCWGC	2 cut(s)	862, 1331
Tsp45I	GTSAC	1 cut(s)	1060
TspDTI	ATGAA	3 cut(s)	355, 1363, 1482
TspGWI	ACGGA	5 cut(s)	259, 412, 813, 1015, 1236
TspRI	CASTG	1 cut(s)	759
Van91I	CCANNNNNTGG	1 cut(s)	68
VpaK11BI	GGWCC	1 cut(s)	1426
XagI	CCTNNNNNAGG	1 cut(s)	1221
XapI	RAATTY	4 cut(s)	306, 468, 507, 1552
XmiI	GTMKAC	1 cut(s)	78
XmnI	GAANNNNTTC	1 cut(s)	1496
XspI	CTAG	1 cut(s)	491
ZraI	GACGTC	1 cut(s)	796
ZrmI	AGTACT	2 cut(s)	1298, 1496
Zsp2I	ATGCAT	1 cut(s)	607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.