Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Forward (+)

11946192 .. 11947796

Gene Structure 1605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006926

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGATACAATCTAATCATACTACATTTCTCTCTGTTGTTCTCCTCTTTCTCCTTCTTCACGTCTCTGCAACCTCCGCTTCTGTCTATGACGACTTCGTTCAATGCCTCAACAGCCACCCAAACTCCTCAGCCACCAAGATAGTCATCCCCCAAAACAACCCTTCTTTCACTTCAACTCTCAGAGCCTACATCCGCAACGCTCGCTTCAACACCTCCACGACTCCCAAACTAGTCCTCATCCTCACGCCGACGACCGAGTCCCACGTCCAGGCCTCGGTCCTCTGCGCCGTTCAACTCAAACTCCAACTCAAAATCCGAAGCGGTGGACACGACTACGAGGGCATCTCATATGTCTCGTCCGAACCGACCTTCGTAATCCTCGACCTGTTCAACCTCCGGTCAATCGACGTCAACGCCGAGGACGCCACCGCGTGGGCCCAGGCCGGCGCAACTCTCGGAGAGTTGTACTATCGAATCTCCGAGAAGAGTAAAACGCTAGGGTTTGCCGCTGGGATTTGCCCCACTGTCGGGGTTGGTGGACACATCAGCGGTGGCGGTTATGGAAACTTATTGAGGAAGTACGGCCTCGCCGTCGATAATGTATTGGATGCATTGATTGTTGATGTGAACGGGAAGCTTCTGGATAGAAAAGCAATGGGGGAGGATCTGTTTTGGGCTATCAGAGGCGGCGGTGGAGGAAGCTTTGGAGTGATCATATCCTATAAATTGAAGTTGGTTCCTGTGCCGGAAACGGTTACGGTTTTCCAGGTGATGAGTTACACAGAAGGTAATGCAACCGACGTCGTTTTGAGGTGGCAGGAGGTGGCGCCGACCACGGTGGATGATTTGTGGATGAGGATGTTGTTGCAGCCGGTGACTTCTCCGACCAAGAAGGGTGAGAAGACTGTTAGGATTTCGATTCTGGCCGAGTATTTAGGCAATGCTAATCAGTTAGTTTCTATTTTGGGTAAGGAGTTTCCTGAATTGGGTTTGAAGGAGGAGGACTGTTTGGAAATGAGTTGGATTGAGTCTGTGCTTTGGTGGAACGATGGTTCAACCCCCAATGTGACCAAACCAGAGGTTTTGCTTGATCGAAATCTCGACCAGGCGAGTTTCGGGAAGAGGAAGTCAGATTACGTGCAGACCCCGATGTCGAGAGAAGGGTTGGAGTCATTGTGGAAGAAGATGATTGAAGGCAAGACTGGTTTGGTGTTCAATCCATATGGTGGGAAAATGGCTCAAATTTCGGCCTCCGATGCTCCTTTTCCTCATCGGGCTGGGAATTTGTTTAAGATTCAGTACTCGGTGAATTGGGACGTTGCAGGAGAGGAAGCAACTAATGAGTATTTGAACCAAAGTAGGGTGCTTTACAGTTTTATGACCCCATTTGTGTCCAAGAATCCAAGGAGTGCTTTCTTGAACTATAGGGACCTTGACGTTGGTGTCAACAATTTTGGGAAGAATAGCTTTGAACAAGGGAAGGTGTATGGATTGATGTACTTCAACGACAATTTCGATAGGTTGGTGAAGGTGAAGACTGCTGTTGATCCAGGAAATTTCTTCAGGAATGAACAGAGTATCCCACCTCTTCCAAGTAAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

535

Amino Acids

59.07

Weight (kDa)

6.23

Isoelectric Point (pI)

34.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	80 - 214	4.2e-25	FAD binding domain
BBE	PF08031	471 - 528	7.8e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	256, 1150, 1442
AatII	GACGTC	2 cut(s)	411, 804
AccB1I	GGYRCC	1 cut(s)	826
AccB7I	CCANNNNNTGG	2 cut(s)	432, 1226
AccII	CGCG	1 cut(s)	431
AciI	CCGC	9 cut(s)	75, 193, 321, 429, 507, 549, 555, 687, 690
AclWI	GGATC	2 cut(s)	672, 1541
AcoI	YGGCCR	1 cut(s)	924
AcsI	RAATTY	3 cut(s)	1242, 1282, 1555
AcuI	CTGAAG	1 cut(s)	1546
AcyI	GRCGYC	4 cut(s)	408, 423, 801, 827
AdeI	CACNNNGTG	1 cut(s)	432
AfaI	GTAC	4 cut(s)	467, 581, 1301, 1499
AfiI	CCNNNNNNNGG	8 cut(s)	268, 274, 432, 527, 528, 986, 1226, 1360
AhlI	ACTAGT	1 cut(s)	229
AjiI	CACGTC	2 cut(s)	61, 265
AjnI	CCWGG	5 cut(s)	267, 438, 765, 1104, 1549
AloI	GAACNNNNNNTCC	4 cut(s)	1036, 1068, 1563, 1595
AluBI	AGCT	3 cut(s)	637, 702, 1467
AluI	AGCT	3 cut(s)	637, 702, 1467
Alw26I	GTCTC	2 cut(s)	67, 358
AlwI	GGATC	2 cut(s)	672, 1541
AoxI	GGCC	6 cut(s)	270, 435, 441, 583, 924, 1248
ApaI	GGGCCC	1 cut(s)	439
ApeKI	GCWGC	1 cut(s)	868
ApoI	RAATTY	3 cut(s)	1242, 1282, 1555
AspLEI	GCGC	3 cut(s)	287, 449, 829
AspS9I	GGNCC	4 cut(s)	277, 435, 436, 1429
AsuHPI	GGTGA	6 cut(s)	781, 886, 908, 1318, 1537, 1543
AvaII	GGWCC	2 cut(s)	277, 1429
BaeGI	GKGCMC	1 cut(s)	439
BanI	GGYRCC	1 cut(s)	826
BanII	GRGCYC	1 cut(s)	439
BarI	GAAGNNNNNNTAC	2 cut(s)	1118, 1150
BbsI	GAAGAC	2 cut(s)	908, 1541
BbvCI	CCTCAGC	1 cut(s)	127
BbvI	GCAGC	1 cut(s)	880
BccI	CCATC	1 cut(s)	1043
BceAI	ACGGC	3 cut(s)	272, 575, 598
BciT130I	CCWGG	5 cut(s)	269, 440, 767, 1106, 1551
BciVI	GTATCC	1 cut(s)	1589
BclI	TGATCA	1 cut(s)	711
BcoDI	GTCTC	2 cut(s)	67, 358
BcuI	ACTAGT	1 cut(s)	229
BfaI	CTAG	2 cut(s)	230, 497
BfmI	CTRYAG	1 cut(s)	1423
BfoI	RGCGCY	1 cut(s)	830
BfuI	GTATCC	1 cut(s)	1589
BisI	GCNGC	3 cut(s)	507, 688, 869
BlsI	GCNGC	3 cut(s)	508, 689, 870
BmcAI	AGTACT	1 cut(s)	1301
Bme1390I	CCNGG	5 cut(s)	269, 440, 767, 1106, 1551
Bme18I	GGWCC	2 cut(s)	277, 1429
BmgBI	CACGTC	2 cut(s)	61, 265
BmgT120I	GGNCC	4 cut(s)	277, 435, 436, 1429
BmiI	GGNNCC	4 cut(s)	437, 738, 828, 1430
BmrFI	CCNGG	5 cut(s)	269, 440, 767, 1106, 1551
BmsI	GCATC	3 cut(s)	351, 598, 1246
BpiI	GAAGAC	2 cut(s)	908, 1541
BplI	GAGNNNNNCTC	2 cut(s)	329, 361
Bpu10I	CCTNAGC	1 cut(s)	127
BsaAI	YACGTR	1 cut(s)	1138
BsaBI	GATNNNNATC	2 cut(s)	143, 1095
BsaHI	GRCGYC	4 cut(s)	408, 423, 801, 827
BsaJI	CCNNGG	5 cut(s)	273, 417, 438, 834, 1403
BsaWI	WCCGGW	1 cut(s)	396
BsaXI	ACNNNNNCTCC	8 cut(s)	107, 137, 285, 315, 653, 683, 1160, 1190
Bsc4I	CCNNNNNNNGG	8 cut(s)	268, 274, 432, 527, 528, 986, 1226, 1360
Bse118I	RCCGGY	2 cut(s)	443, 871
Bse1I	ACTGG	1 cut(s)	1207
Bse3DI	GCAATG	2 cut(s)	660, 946
Bse8I	GATNNNNATC	2 cut(s)	143, 1095
BseBI	CCWGG	5 cut(s)	269, 440, 767, 1106, 1551
BseDI	CCNNGG	5 cut(s)	273, 417, 438, 834, 1403
BseGI	GGATG	7 cut(s)	144, 189, 237, 613, 847, 858, 864
BseJI	GATNNNNATC	2 cut(s)	143, 1095
BseLI	CCNNNNNNNGG	8 cut(s)	268, 274, 432, 527, 528, 986, 1226, 1360
BseMI	GCAATG	2 cut(s)	660, 946
BseMII	CTCAG	2 cut(s)	141, 193
BseNI	ACTGG	1 cut(s)	1207
BseRI	GAGGAG	3 cut(s)	32, 115, 1013
BseSI	GKGCMC	1 cut(s)	439
BseXI	GCAGC	1 cut(s)	880
BseYI	CCCAGC	2 cut(s)	509, 1277
BsgI	GTGCAG	1 cut(s)	1160
Bsh1236I	CGCG	1 cut(s)	431
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	6 cut(s)	272, 437, 443, 585, 926, 1250
BshNI	GGYRCC	1 cut(s)	826
BsiEI	CGRYCG	1 cut(s)	255
BsiSI	CCGG	4 cut(s)	397, 444, 746, 872
BslFI	GGGAC	3 cut(s)	244, 1328, 1442
BslI	CCNNNNNNNGG	8 cut(s)	268, 274, 432, 527, 528, 986, 1226, 1360
BsmAI	GTCTC	2 cut(s)	67, 358
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	3 cut(s)	244, 1328, 1442
BsnI	GGCC	6 cut(s)	272, 437, 443, 585, 926, 1250
Bsp120I	GGGCCC	1 cut(s)	435
Bsp1286I	GDGCHC	1 cut(s)	439
Bsp143I	GATC	4 cut(s)	664, 711, 1090, 1546
BspACI	CCGC	9 cut(s)	75, 193, 321, 429, 507, 549, 555, 687, 690
BspANI	GGCC	6 cut(s)	272, 437, 443, 585, 926, 1250
BspCNI	CTCAG	2 cut(s)	140, 192
BspFNI	CGCG	1 cut(s)	431
BspLI	GGNNCC	4 cut(s)	437, 738, 828, 1430
BspPI	GGATC	2 cut(s)	672, 1541
BspT107I	GGYRCC	1 cut(s)	826
BsrDI	GCAATG	2 cut(s)	660, 946
BsrFI	RCCGGY	2 cut(s)	443, 871
BsrI	ACTGG	1 cut(s)	1207
BssAI	RCCGGY	2 cut(s)	443, 871
BssECI	CCNNGG	5 cut(s)	273, 417, 438, 834, 1403
BssMI	GATC	4 cut(s)	664, 711, 1090, 1546
BssNI	GRCGYC	4 cut(s)	408, 423, 801, 827
BssT1I	CCWWGG	1 cut(s)	1403
Bst2UI	CCWGG	5 cut(s)	269, 440, 767, 1106, 1551
Bst4CI	ACNGT	7 cut(s)	526, 754, 760, 838, 907, 1007, 1373
Bst6I	CTCTTC	3 cut(s)	479, 1115, 1593
BstACI	GRCGYC	4 cut(s)	408, 423, 801, 827
BstBAI	YACGTR	1 cut(s)	1138
BstC8I	GCNNGC	2 cut(s)	202, 445
BstDEI	CTNAG	2 cut(s)	127, 179
BstDSI	CCRYGG	1 cut(s)	834
BstF5I	GGATG	7 cut(s)	144, 189, 237, 613, 847, 858, 864
BstFNI	CGCG	1 cut(s)	431
BstH2I	RGCGCY	1 cut(s)	830
BstHHI	GCGC	3 cut(s)	287, 449, 829
BstKTI	GATC	4 cut(s)	667, 714, 1093, 1549
BstMAI	GTCTC	2 cut(s)	67, 358
BstMBI	GATC	4 cut(s)	664, 711, 1090, 1546
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 111, 201, 422, 1256
BstNI	CCWGG	5 cut(s)	269, 440, 767, 1106, 1551
BstSCI	CCNGG	5 cut(s)	267, 438, 765, 1104, 1549
BstSFI	CTRYAG	1 cut(s)	1423
BstSLI	GKGCMC	1 cut(s)	439
BstUI	CGCG	1 cut(s)	431
BstV1I	GCAGC	1 cut(s)	880
BstV2I	GAAGAC	2 cut(s)	908, 1541
BstX2I	RGATCY	1 cut(s)	664
BstYI	RGATCY	1 cut(s)	664
BsuI	GTATCC	1 cut(s)	1589
BsuRI	GGCC	6 cut(s)	272, 437, 443, 585, 926, 1250
BtgI	CCRYGG	1 cut(s)	834
BtrI	CACGTC	2 cut(s)	61, 265
BtsCI	GGATG	7 cut(s)	144, 189, 237, 613, 847, 858, 864
BtsIMutI	CAGTG	1 cut(s)	522
Cac8I	GCNNGC	2 cut(s)	202, 445
CfoI	GCGC	3 cut(s)	287, 449, 829
Cfr10I	RCCGGY	2 cut(s)	443, 871
Cfr13I	GGNCC	4 cut(s)	277, 435, 436, 1429
CseI	GACGC	1 cut(s)	431
Csp6I	GTAC	4 cut(s)	466, 580, 1300, 1498
CviQI	GTAC	4 cut(s)	466, 580, 1300, 1498
DdeI	CTNAG	2 cut(s)	127, 179
DinI	GGCGCC	1 cut(s)	828
DpnI	GATC	4 cut(s)	666, 713, 1092, 1548
DpnII	GATC	4 cut(s)	664, 711, 1090, 1546
DraIII	CACNNNGTG	1 cut(s)	432
DrdI	GACNNNNNNGTC	3 cut(s)	256, 1150, 1442
DseDI	GACNNNNNNGTC	3 cut(s)	256, 1150, 1442
EaeI	YGGCCR	1 cut(s)	924
Eam1104I	CTCTTC	3 cut(s)	479, 1115, 1593
EarI	CTCTTC	3 cut(s)	479, 1115, 1593
Eco130I	CCWWGG	1 cut(s)	1403
Eco147I	AGGCCT	1 cut(s)	272
Eco24I	GRGCYC	1 cut(s)	439
Eco47I	GGWCC	2 cut(s)	277, 1429
Eco57I	CTGAAG	1 cut(s)	1546
EcoO109I	RGGNCCY	1 cut(s)	1429
EcoRII	CCWGG	5 cut(s)	267, 438, 765, 1104, 1549
EcoT14I	CCWWGG	1 cut(s)	1403
EcoT22I	ATGCAT	1 cut(s)	613
EcoT38I	GRGCYC	1 cut(s)	439
EgeI	GGCGCC	1 cut(s)	828
EheI	GGCGCC	1 cut(s)	828
ErhI	CCWWGG	1 cut(s)	1403
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	4 cut(s)	1396, 1428, 1451, 1483
FaqI	GGGAC	3 cut(s)	244, 1328, 1442
FauNDI	CATATG	2 cut(s)	349, 1222
FbaI	TGATCA	1 cut(s)	711
Fnu4HI	GCNGC	3 cut(s)	507, 688, 869
FokI	GGATG	7 cut(s)	131, 176, 224, 620, 854, 865, 871
FriOI	GRGCYC	1 cut(s)	439
Fsp4HI	GCNGC	3 cut(s)	507, 688, 869
FspBI	CTAG	2 cut(s)	230, 497
GlaI	GCGC	3 cut(s)	286, 448, 828
GluI	GCNGC	3 cut(s)	507, 688, 869
GsaI	CCCAGC	2 cut(s)	513, 1281
HaeII	RGCGCY	1 cut(s)	830
HaeIII	GGCC	6 cut(s)	272, 437, 443, 585, 926, 1250
HapII	CCGG	4 cut(s)	397, 444, 746, 872
HgaI	GACGC	1 cut(s)	431
HhaI	GCGC	3 cut(s)	287, 449, 829
Hin1I	GRCGYC	4 cut(s)	408, 423, 801, 827
Hin6I	GCGC	3 cut(s)	285, 447, 827
HinP1I	GCGC	3 cut(s)	285, 447, 827
HincII	GTYRAC	2 cut(s)	412, 1447
HindII	GTYRAC	2 cut(s)	412, 1447
HindIII	AAGCTT	2 cut(s)	635, 700
HinfI	GANTC	8 cut(s)	220, 257, 474, 919, 1028, 1169, 1294, 1399
HpaII	CCGG	4 cut(s)	397, 444, 746, 872
HphI	GGTGA	6 cut(s)	781, 886, 908, 1318, 1537, 1543
Hpy166II	GTNNAC	5 cut(s)	326, 412, 539, 628, 1447
Hpy188I	TCNGA	9 cut(s)	182, 317, 361, 458, 481, 683, 885, 1132, 1255
Hpy188III	TCNNGA	7 cut(s)	641, 980, 1100, 1117, 1155, 1417, 1564
Hpy8I	GTNNAC	5 cut(s)	326, 412, 539, 628, 1447
Hpy99I	CGWCG	5 cut(s)	253, 410, 596, 803, 806
HpyCH4III	ACNGT	7 cut(s)	526, 754, 760, 838, 907, 1007, 1373
HpyCH4IV	ACGT	7 cut(s)	60, 264, 408, 801, 1137, 1317, 1437
HpyCH4V	TGCA	6 cut(s)	68, 611, 794, 868, 1141, 1322
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 111, 201, 422, 1256
HpyF3I	CTNAG	2 cut(s)	127, 179
HpySE526I	ACGT	7 cut(s)	60, 264, 408, 801, 1137, 1317, 1437
Hsp92I	GRCGYC	4 cut(s)	408, 423, 801, 827
HspAI	GCGC	3 cut(s)	285, 447, 827
KasI	GGCGCC	1 cut(s)	826
KroI	GCCGGC	1 cut(s)	443
KroNI	GCCGGC	1 cut(s)	445
Ksp22I	TGATCA	1 cut(s)	711
Kzo9I	GATC	4 cut(s)	664, 711, 1090, 1546
LmnI	GCTCC	1 cut(s)	1264
Lsp1109I	GCAGC	1 cut(s)	880
LweI	GCATC	3 cut(s)	351, 598, 1246
MaeI	CTAG	2 cut(s)	230, 497
MaeII	ACGT	7 cut(s)	60, 264, 408, 801, 1137, 1317, 1437
MaeIII	GTNAC	4 cut(s)	754, 776, 874, 1066
MalI	GATC	4 cut(s)	666, 713, 1092, 1548
MboI	GATC	4 cut(s)	664, 711, 1090, 1546
MflI	RGATCY	1 cut(s)	664
MhlI	GDGCHC	1 cut(s)	439
MluCI	AATT	8 cut(s)	725, 983, 1242, 1282, 1309, 1450, 1510, 1555
Mly113I	GGCGCC	1 cut(s)	827
MlyI	GAGTC	4 cut(s)	214, 266, 1037, 1178
MmeI	TCCRAC	4 cut(s)	328, 908, 1001, 1146
Mph1103I	ATGCAT	1 cut(s)	613
MroNI	GCCGGC	1 cut(s)	443
MseI	TTAA	1 cut(s)	1290
MspA1I	CMGCKG	2 cut(s)	509, 549
MspI	CCGG	4 cut(s)	397, 444, 746, 872
MspR9I	CCNGG	5 cut(s)	269, 440, 767, 1106, 1551
MvaI	CCWGG	5 cut(s)	269, 440, 767, 1106, 1551
MvnI	CGCG	1 cut(s)	431
MwoI	GCNNNNNNNGC	5 cut(s)	74, 111, 201, 422, 1256
NaeI	GCCGGC	1 cut(s)	445
NarI	GGCGCC	1 cut(s)	827
NdeI	CATATG	2 cut(s)	349, 1222
NdeII	GATC	4 cut(s)	664, 711, 1090, 1546
NgoMIV	GCCGGC	1 cut(s)	443
NlaIV	GGNNCC	4 cut(s)	437, 738, 828, 1430
NmeAIII	GCCGAG	2 cut(s)	442, 952
NmuCI	GTSAC	2 cut(s)	874, 1066
NsiI	ATGCAT	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	272
PcsI	WCGNNNNNNNCGW	5 cut(s)	362, 378, 414, 588, 1512
PdiI	GCCGGC	1 cut(s)	445
PfeI	GAWTC	4 cut(s)	474, 919, 1294, 1399
PflFI	GACNNNGTC	1 cut(s)	256
PflMI	CCANNNNNTGG	2 cut(s)	432, 1226
PfoI	TCCNGGA	1 cut(s)	1549
PkrI	GCNGC	3 cut(s)	508, 689, 870
PleI	GAGTC	4 cut(s)	214, 265, 1036, 1177
PluTI	GGCGCC	1 cut(s)	830
PpsI	GAGTC	4 cut(s)	214, 265, 1036, 1177
Ppu21I	YACGTR	1 cut(s)	1138
PpuMI	RGGWCCY	1 cut(s)	1429
Psp5II	RGGWCCY	1 cut(s)	1429
Psp6I	CCWGG	5 cut(s)	267, 438, 765, 1104, 1549
PspFI	CCCAGC	2 cut(s)	509, 1277
PspGI	CCWGG	5 cut(s)	267, 438, 765, 1104, 1549
PspN4I	GGNNCC	4 cut(s)	437, 738, 828, 1430
PspOMI	GGGCCC	1 cut(s)	435
PspPI	GGNCC	4 cut(s)	277, 435, 436, 1429
PspPPI	RGGWCCY	1 cut(s)	1429
PsuI	RGATCY	1 cut(s)	664
PsyI	GACNNNGTC	1 cut(s)	256
RsaI	GTAC	4 cut(s)	467, 581, 1301, 1499
RsaNI	GTAC	4 cut(s)	466, 580, 1300, 1498
SaqAI	TTAA	1 cut(s)	1290
SatI	GCNGC	3 cut(s)	507, 688, 869
Sau3AI	GATC	4 cut(s)	664, 711, 1090, 1546
Sau96I	GGNCC	4 cut(s)	277, 435, 436, 1429
ScaI	AGTACT	1 cut(s)	1301
SchI	GAGTC	4 cut(s)	214, 266, 1037, 1178
ScrFI	CCNGG	5 cut(s)	269, 440, 767, 1106, 1551
SduI	GDGCHC	1 cut(s)	439
SfaNI	GCATC	3 cut(s)	351, 598, 1246
SfcI	CTRYAG	1 cut(s)	1423
SfoI	GGCGCC	1 cut(s)	828
SinI	GGWCC	2 cut(s)	277, 1429
SpeI	ACTAGT	1 cut(s)	229
Sse9I	AATT	8 cut(s)	725, 983, 1242, 1282, 1309, 1450, 1510, 1555
SseBI	AGGCCT	1 cut(s)	272
SsiI	CCGC	9 cut(s)	75, 193, 321, 429, 507, 549, 555, 687, 690
SspDI	GGCGCC	1 cut(s)	826
SspMI	CTAG	2 cut(s)	230, 497
StuI	AGGCCT	1 cut(s)	272
StyD4I	CCNGG	5 cut(s)	267, 438, 765, 1104, 1549
StyI	CCWWGG	1 cut(s)	1403
TaaI	ACNGT	7 cut(s)	526, 754, 760, 838, 907, 1007, 1373
TaiI	ACGT	7 cut(s)	63, 267, 411, 804, 1140, 1320, 1440
TaqI	TCGA	9 cut(s)	381, 405, 472, 594, 917, 1093, 1101, 1154, 1515
TaqII	GACCGA	2 cut(s)	265, 269
TasI	AATT	8 cut(s)	725, 983, 1242, 1282, 1309, 1450, 1510, 1555
TatI	WGTACW	3 cut(s)	465, 1299, 1497
TauI	GCSGC	2 cut(s)	509, 690
TfiI	GAWTC	4 cut(s)	474, 919, 1294, 1399
Tru1I	TTAA	1 cut(s)	1290
Tru9I	TTAA	1 cut(s)	1290
TscAI	CASTG	1 cut(s)	529
TseFI	GTSAC	2 cut(s)	874, 1066
TseI	GCWGC	1 cut(s)	868
Tsp45I	GTSAC	2 cut(s)	874, 1066
TspDTI	ATGAA	1 cut(s)	1584
TspRI	CASTG	1 cut(s)	529
Tth111I	GACNNNGTC	1 cut(s)	256
Van91I	CCANNNNNTGG	2 cut(s)	432, 1226
VpaK11BI	GGWCC	2 cut(s)	277, 1429
XapI	RAATTY	3 cut(s)	1242, 1282, 1555
XspI	CTAG	2 cut(s)	230, 497
ZraI	GACGTC	2 cut(s)	409, 802
ZrmI	AGTACT	1 cut(s)	1301
Zsp2I	ATGCAT	1 cut(s)	613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.