Prupe.1G438500_v2.0.a1

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
37308257 .. 37310067
1811 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G438500.1

Sequence Viewer

Length: 1770 bp
ATGCTTAGGATGATGATGCTTCCACTTGTTGTCCTCCTAGTTTTTCATGTTTCTGCTTCATGGGCAGCCTCAGCTTCTGTCTATGACAACTTTCTTCAGTGCCTAAACACCAACACAAACCCATCATCAACCCAATTGTCCAACATAATCTATGCCCAAAACAACCCTTCGTACTCAGCTGTTCTAAGAGCCTACATCAGAAACTCAAGGTTCAACACCACTTCGACTCCGAAACCAGTCCTCATTGTCACACCCTCTGCTGCATCTCATGTTCAAGCCTCTGTTGTTTGTGCCAAACAACTTGGCATACAGCTGAGAATCCGAAGCGGCGGGCACGATTATGAGGGCCTTTCTTACTGGTCTGATCAGACCTTTATTGTCCTTGACATGTTTAACCTCAGGTCTGTGACTGTAGACATTGAGGACAGCTCCGTTTGGGTTCAGGCTGGAGCCACACTTGGAGAATTGTACTATAGGATTTCAGAGAAGAGCAAAGTTCATGGCTTTCCTGCTGGTGTTTGTCCCACAGTTGGTATTGGAGGGCACATTAGTGGTGGTGGCTATGGAAACATGTTGAGGAAGTTTGGCCTTGCTGTTGACAATGTCCTTGATGCTCAGATTGTTGATGCTAAGGGGAGACTTCTTGATAGAAAAGCAATGGGAGAAGACCTGTTTTGGGCTATTAAAGGAGGGGGTGGAGGAAGCTTTGGTGTCATTGTTGCATACAAATTGAAGCTGGTTTCTGTCCCAGAAACTGTTACAGTTTTCCAGGCTGCGAGAACGTTGGAAGAGAATGCAACCGACTTTGTTTCGAGGTGGCAAGAGGTGGCACCAACCACAGATGACGGTCTGTTTATGAGGATGCTACTGCAGCCAGGGAGCAACACTGTTAAAGCCACAATCATCGCAGAGTTTCTAGGTAATGCTGACCAACTTGTGTCATTGTTGGGGAAGCAGTTTCCTGAGTTGGGTTTGAAGGAGGAGGACTGTAAGGAGATGAGCTGGATTGAGTCTGTGCTTTGGTGGGATAACTATGATAATGGGACCTCCCCTGATGTGTTGCTTGATAGAAATCCTGATCATGCAAATTTCCTGAAAAGAAAGTCTGATTATGTTCAAACCTCAATTTCCAAAAGTAGGTTGGAATTGCTGTGGAAGAAGATGATTGAAATAGGCAAAATAGGTTTGGTTTTCAATCCATATGGTGGGATGATGAGTCGGATTCCGGCCTCTGCCACGCCTTTTCCACACCGTGCCGGTAACTTGTTCAAAGTTCAGTACTCAGTGAGCTGGGGAGAAGCAGGGGCTGAAGCAGAGAATAATTATACCACAGACACCAGGAGGCTTTTCAGGTTCATGACCCCATTTGTGTCCAAGAACCCAAGGAGTGCTTTCTTGAATTACAGGGACCTTGACATTGGTGTCAATAAATTTGGTAACAGAAGCTATGAACAAGGGAAGGTGTATGGCTTGAAGTACTTCAATGACAATTTTGATAGGTTGGTGAAGGTGAAGACTGCTGTTGATCCAGAAAATTTCTTCAGGAACGAGCAGAGCATCCCACCTAATCCAACCACCTTTTTCAAGCTTGCACTTAGATGTGAATTGGGGGTCAAGTTCCAAACTATCAATGGGGAAGCTGAAGCTAGTACTGGTGTTCTTGTTTATTTCCTTTTCATTTTGTATTTAGTCAGTTCTTTTCCTTTTAATTTTGTATTTAGTCAGACATTAGTAGCAGATTGGCAACCCCTCAATTTTGTACTGTGGTAA

Protein Analysis

590

Amino Acids

65.79

Weight (kDa)

8.08

Isoelectric Point (pI)

31.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1421
AccB1I GGYRCC 1 cut(s) 829
AccB7I CCANNNNNTGG 1 cut(s) 1205
AccI GTMKAC 1 cut(s) 414
AciI CCGC 2 cut(s) 327, 330
AclI AACGTT 1 cut(s) 782
AclWI GGATC 1 cut(s) 1520
AcsI RAATTY 3 cut(s) 1087, 1430, 1534
AcuI CTGAAG 4 cut(s) 80, 1329, 1525, 1662
AdeI CACNNNGTG 1 cut(s) 1253
AfaI GTAC 6 cut(s) 173, 470, 1280, 1478, 1651, 1761
AfiI CCNNNNNNNGG 5 cut(s) 530, 676, 968, 1137, 1205
AflIII ACRYGT 2 cut(s) 387, 570
AjnI CCWGG 3 cut(s) 768, 874, 1337
AleI CACNNNNGTG 1 cut(s) 549
Alw26I GTCTC 1 cut(s) 631
AlwI GGATC 1 cut(s) 1520
AlwNI CAGNNNCTG 3 cut(s) 77, 755, 1307
AoxI GGCC 3 cut(s) 346, 586, 1227
ApeKI GCWGC 4 cut(s) 65, 260, 773, 871
ApoI RAATTY 3 cut(s) 1087, 1430, 1534
Asp700I GAANNNNTTC 1 cut(s) 1478
AspS9I GGNCC 3 cut(s) 346, 1044, 1408
AsuHPI GGTGA 2 cut(s) 1516, 1522
AvaII GGWCC 2 cut(s) 1044, 1408
AxyI CCTNAGG 1 cut(s) 398
BaeGI GKGCMC 2 cut(s) 336, 546
BanI GGYRCC 1 cut(s) 829
BbsI GAAGAC 2 cut(s) 672, 1520
BbvCI CCTCAGC 1 cut(s) 70
BbvI GCAGC 4 cut(s) 77, 247, 760, 883
BccI CCATC 1 cut(s) 130
BciT130I CCWGG 3 cut(s) 770, 876, 1339
BclI TGATCA 2 cut(s) 364, 1078
BcoDI GTCTC 1 cut(s) 631
BfaI CTAG 3 cut(s) 38, 917, 1647
BfmI CTRYAG 3 cut(s) 411, 472, 869
BisI GCNGC 5 cut(s) 66, 261, 328, 774, 872
BlsI GCNGC 5 cut(s) 67, 262, 329, 775, 873
BmcAI AGTACT 3 cut(s) 1280, 1478, 1651
Bme1390I CCNGG 3 cut(s) 770, 876, 1339
Bme18I GGWCC 2 cut(s) 1044, 1408
BmgT120I GGNCC 3 cut(s) 346, 1044, 1408
BmiI GGNNCC 4 cut(s) 451, 831, 1045, 1409
BmrFI CCNGG 3 cut(s) 770, 876, 1339
BmsI GCATC 6 cut(s) 6, 272, 601, 616, 852, 1566
BpiI GAAGAC 2 cut(s) 672, 1520
BplI GAGNNNNNCTC 2 cut(s) 413, 445
BpmI CTGGAG 1 cut(s) 468
Bpu10I CCTNAGC 3 cut(s) 5, 70, 630
BpuEI CTTGAG 1 cut(s) 190
BsaBI GATNNNNATC 1 cut(s) 1071
BsaJI CCNNGG 2 cut(s) 875, 1382
BsaXI ACNNNNNCTCC 2 cut(s) 211, 241
Bsc4I CCNNNNNNNGG 5 cut(s) 530, 676, 968, 1137, 1205
Bse118I RCCGGY 1 cut(s) 1256
Bse1I ACTGG 3 cut(s) 236, 362, 1657
Bse21I CCTNAGG 1 cut(s) 398
Bse3DI GCAATG 1 cut(s) 663
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 3 cut(s) 770, 876, 1339
BseDI CCNNGG 2 cut(s) 875, 1382
BseGI GGATG 4 cut(s) 15, 867, 1215, 1557
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 5 cut(s) 530, 676, 968, 1137, 1205
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 7 cut(s) 84, 189, 305, 412, 629, 954, 1296
BseNI ACTGG 3 cut(s) 236, 362, 1657
BseRI GAGGAG 1 cut(s) 995
BseSI GKGCMC 2 cut(s) 336, 546
BseXI GCAGC 4 cut(s) 77, 247, 760, 883
BseYI CCCAGC 1 cut(s) 1290
BshFI GGCC 3 cut(s) 348, 588, 1229
BshNI GGYRCC 1 cut(s) 829
BsiSI CCGG 2 cut(s) 1226, 1257
BslFI GGGAC 4 cut(s) 507, 731, 1057, 1421
BslI CCNNNNNNNGG 5 cut(s) 530, 676, 968, 1137, 1205
BsmAI GTCTC 1 cut(s) 631
BsmFI GGGAC 4 cut(s) 507, 731, 1057, 1421
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 3 cut(s) 348, 588, 1229
Bsp1286I GDGCHC 2 cut(s) 336, 546
Bsp143I GATC 3 cut(s) 364, 1078, 1525
BspACI CCGC 2 cut(s) 327, 330
BspANI GGCC 3 cut(s) 348, 588, 1229
BspCNI CTCAG 7 cut(s) 83, 188, 306, 411, 628, 955, 1295
BspHI TCATGA 1 cut(s) 1356
BspLI GGNNCC 4 cut(s) 451, 831, 1045, 1409
BspMAI CTGCAG 1 cut(s) 873
BspPI GGATC 1 cut(s) 1520
BspQI GCTCTTC 1 cut(s) 482
BspT107I GGYRCC 1 cut(s) 829
BsrDI GCAATG 1 cut(s) 663
BsrFI RCCGGY 1 cut(s) 1256
BsrI ACTGG 3 cut(s) 236, 362, 1657
BssAI RCCGGY 1 cut(s) 1256
BssECI CCNNGG 2 cut(s) 875, 1382
BssMI GATC 3 cut(s) 364, 1078, 1525
BssT1I CCWWGG 1 cut(s) 1382
Bst2UI CCWGG 3 cut(s) 770, 876, 1339
Bst4CI ACNGT 9 cut(s) 412, 529, 757, 763, 848, 889, 989, 1253, 1764
Bst6I CTCTTC 2 cut(s) 482, 783
BstC8I GCNNGC 2 cut(s) 332, 1590
BstF5I GGATG 4 cut(s) 15, 867, 1215, 1557
BstKTI GATC 3 cut(s) 367, 1081, 1528
BstMAI GTCTC 1 cut(s) 631
BstMBI GATC 3 cut(s) 364, 1078, 1525
BstMWI GCNNNNNNNGC 3 cut(s) 62, 71, 871
BstNI CCWGG 3 cut(s) 770, 876, 1339
BstNSI RCATGY 2 cut(s) 391, 574
BstSCI CCNGG 3 cut(s) 768, 874, 1337
BstSFI CTRYAG 3 cut(s) 411, 472, 869
BstSLI GKGCMC 2 cut(s) 336, 546
BstV1I GCAGC 4 cut(s) 77, 247, 760, 883
BstV2I GAAGAC 2 cut(s) 672, 1520
Bsu36I CCTNAGG 1 cut(s) 398
BsuRI GGCC 3 cut(s) 348, 588, 1229
BtgZI GCGATG 1 cut(s) 889
BtsCI GGATG 4 cut(s) 15, 867, 1215, 1557
BtsIMutI CAGTG 3 cut(s) 104, 885, 1290
Cac8I GCNNGC 2 cut(s) 332, 1590
CaiI CAGNNNCTG 3 cut(s) 77, 755, 1307
CciI TCATGA 1 cut(s) 1356
Cfr10I RCCGGY 1 cut(s) 1256
Cfr13I GGNCC 3 cut(s) 346, 1044, 1408
Csp6I GTAC 6 cut(s) 172, 469, 1279, 1477, 1650, 1760
CviAII CATG 8 cut(s) 47, 60, 269, 388, 500, 571, 1082, 1357
CviQI GTAC 6 cut(s) 172, 469, 1279, 1477, 1650, 1760
DpnI GATC 3 cut(s) 366, 1080, 1527
DpnII GATC 3 cut(s) 364, 1078, 1525
DraIII CACNNNGTG 1 cut(s) 1253
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
Eam1104I CTCTTC 2 cut(s) 482, 783
EarI CTCTTC 2 cut(s) 482, 783
Eco130I CCWWGG 1 cut(s) 1382
Eco47I GGWCC 2 cut(s) 1044, 1408
Eco57I CTGAAG 4 cut(s) 80, 1329, 1525, 1662
Eco81I CCTNAGG 1 cut(s) 398
EcoO109I RGGNCCY 3 cut(s) 346, 1044, 1408
EcoRII CCWGG 3 cut(s) 768, 874, 1337
EcoT14I CCWWGG 1 cut(s) 1382
ErhI CCWWGG 1 cut(s) 1382
FaeI CATG 8 cut(s) 50, 63, 272, 391, 503, 574, 1085, 1360
FalI AAGNNNNNCTT 2 cut(s) 1375, 1407
FaqI GGGAC 4 cut(s) 507, 731, 1057, 1421
FatI CATG 8 cut(s) 46, 59, 268, 387, 499, 570, 1081, 1356
FauI CCCGC 1 cut(s) 323
FauNDI CATATG 1 cut(s) 1201
FbaI TGATCA 2 cut(s) 364, 1078
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 5 cut(s) 66, 261, 328, 774, 872
FokI GGATG 4 cut(s) 22, 874, 1222, 1544
Fsp4HI GCNGC 5 cut(s) 66, 261, 328, 774, 872
FspBI CTAG 3 cut(s) 38, 917, 1647
GluI GCNGC 5 cut(s) 66, 261, 328, 774, 872
GsaI CCCAGC 1 cut(s) 1294
GsuI CTGGAG 1 cut(s) 468
HaeIII GGCC 3 cut(s) 348, 588, 1229
HapII CCGG 2 cut(s) 1226, 1257
Hin1II CATG 8 cut(s) 50, 63, 272, 391, 503, 574, 1085, 1360
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 2 cut(s) 703, 1586
HinfI GANTC 5 cut(s) 226, 318, 1010, 1216, 1222
HpaII CCGG 2 cut(s) 1226, 1257
HphI GGTGA 2 cut(s) 1516, 1522
Hpy166II GTNNAC 2 cut(s) 415, 598
Hpy188III TCNNGA 8 cut(s) 644, 962, 1076, 1093, 1357, 1396, 1529, 1543
Hpy8I GTNNAC 2 cut(s) 415, 598
HpyAV CCTTC 4 cut(s) 177, 970, 1453, 1501
HpyCH4III ACNGT 9 cut(s) 412, 529, 757, 763, 848, 889, 989, 1253, 1764
HpyCH4IV ACGT 1 cut(s) 782
HpyCH4V TGCA 6 cut(s) 263, 722, 797, 871, 1085, 1592
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 71, 871
HpySE526I ACGT 1 cut(s) 782
Hsp92II CATG 8 cut(s) 50, 63, 272, 391, 503, 574, 1085, 1360
Ksp22I TGATCA 2 cut(s) 364, 1078
Kzo9I GATC 3 cut(s) 364, 1078, 1525
LguI GCTCTTC 1 cut(s) 482
LmnI GCTCC 3 cut(s) 434, 449, 879
Lsp1109I GCAGC 4 cut(s) 77, 247, 760, 883
LweI GCATC 6 cut(s) 6, 272, 601, 616, 852, 1566
MaeI CTAG 3 cut(s) 38, 917, 1647
MaeII ACGT 1 cut(s) 782
MaeIII GTNAC 5 cut(s) 247, 406, 757, 1259, 1436
MalI GATC 3 cut(s) 366, 1080, 1527
MboI GATC 3 cut(s) 364, 1078, 1525
MboII GAAGA 8 cut(s) 86, 499, 677, 800, 1168, 1171, 1525, 1531
MfeI CAATTG 1 cut(s) 134
MhlI GDGCHC 2 cut(s) 336, 546
MlyI GAGTC 3 cut(s) 220, 1019, 1225
MmeI TCCRAC 5 cut(s) 165, 765, 1122, 1199, 1595
MroXI GAANNNNTTC 1 cut(s) 1478
MseI TTAA 4 cut(s) 393, 684, 891, 1707
MslI CAYNNNNRTG 3 cut(s) 339, 549, 1597
MspA1I CMGCKG 2 cut(s) 179, 313
MspI CCGG 2 cut(s) 1226, 1257
MspR9I CCNGG 3 cut(s) 770, 876, 1339
MunI CAATTG 1 cut(s) 134
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 3 cut(s) 770, 876, 1339
MwoI GCNNNNNNNGC 3 cut(s) 62, 71, 871
NdeI CATATG 1 cut(s) 1201
NdeII GATC 3 cut(s) 364, 1078, 1525
NlaIII CATG 8 cut(s) 50, 63, 272, 391, 503, 574, 1085, 1360
NlaIV GGNNCC 4 cut(s) 451, 831, 1045, 1409
NmuCI GTSAC 2 cut(s) 247, 406
NspI RCATGY 2 cut(s) 391, 574
OliI CACNNNNGTG 1 cut(s) 549
PagI TCATGA 1 cut(s) 1356
PciI ACATGT 2 cut(s) 387, 570
PciSI GCTCTTC 1 cut(s) 482
PctI GAATGC 1 cut(s) 799
PdmI GAANNNNTTC 1 cut(s) 1478
PfeI GAWTC 2 cut(s) 318, 1222
PflFI GACNNNGTC 1 cut(s) 602
PflMI CCANNNNNTGG 1 cut(s) 1205
PkrI GCNGC 5 cut(s) 67, 262, 329, 775, 873
PleI GAGTC 3 cut(s) 220, 1018, 1224
PpsI GAGTC 3 cut(s) 220, 1018, 1224
PpuMI RGGWCCY 2 cut(s) 1044, 1408
PscI ACATGT 2 cut(s) 387, 570
Psp1406I AACGTT 1 cut(s) 782
Psp5II RGGWCCY 2 cut(s) 1044, 1408
Psp6I CCWGG 3 cut(s) 768, 874, 1337
PspFI CCCAGC 1 cut(s) 1290
PspGI CCWGG 3 cut(s) 768, 874, 1337
PspN4I GGNNCC 4 cut(s) 451, 831, 1045, 1409
PspPI GGNCC 3 cut(s) 346, 1044, 1408
PspPPI RGGWCCY 2 cut(s) 1044, 1408
PstI CTGCAG 1 cut(s) 873
PstNI CAGNNNCTG 3 cut(s) 77, 755, 1307
PsyI GACNNNGTC 1 cut(s) 602
PvuII CAGCTG 2 cut(s) 179, 313
RsaI GTAC 6 cut(s) 173, 470, 1280, 1478, 1651, 1761
RsaNI GTAC 6 cut(s) 172, 469, 1279, 1477, 1650, 1760
RseI CAYNNNNRTG 3 cut(s) 339, 549, 1597
SapI GCTCTTC 1 cut(s) 482
SaqAI TTAA 4 cut(s) 393, 684, 891, 1707
SatI GCNGC 5 cut(s) 66, 261, 328, 774, 872
Sau3AI GATC 3 cut(s) 364, 1078, 1525
Sau96I GGNCC 3 cut(s) 346, 1044, 1408
ScaI AGTACT 3 cut(s) 1280, 1478, 1651
SchI GAGTC 3 cut(s) 220, 1019, 1225
ScrFI CCNGG 3 cut(s) 770, 876, 1339
SduI GDGCHC 2 cut(s) 336, 546
SfaNI GCATC 6 cut(s) 6, 272, 601, 616, 852, 1566
SfcI CTRYAG 3 cut(s) 411, 472, 869
SinI GGWCC 2 cut(s) 1044, 1408
SmiMI CAYNNNNRTG 3 cut(s) 339, 549, 1597
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
SsiI CCGC 2 cut(s) 327, 330
SspMI CTAG 3 cut(s) 38, 917, 1647
StyD4I CCNGG 3 cut(s) 768, 874, 1337
StyI CCWWGG 1 cut(s) 1382
TaaI ACNGT 9 cut(s) 412, 529, 757, 763, 848, 889, 989, 1253, 1764
TaiI ACGT 1 cut(s) 785
TaqI TCGA 2 cut(s) 224, 812
TatI WGTACW 5 cut(s) 468, 1278, 1476, 1649, 1759
TauI GCSGC 1 cut(s) 330
TfiI GAWTC 2 cut(s) 318, 1222
Tru1I TTAA 4 cut(s) 393, 684, 891, 1707
Tru9I TTAA 4 cut(s) 393, 684, 891, 1707
TscAI CASTG 3 cut(s) 104, 892, 1290
TseFI GTSAC 2 cut(s) 247, 406
TseI GCWGC 4 cut(s) 65, 260, 773, 871
Tsp45I GTSAC 2 cut(s) 247, 406
TspDTI ATGAA 6 cut(s) 35, 48, 488, 1345, 1464, 1666
TspGWI ACGGA 1 cut(s) 421
TspRI CASTG 3 cut(s) 104, 892, 1290
Tth111I GACNNNGTC 1 cut(s) 602
Van91I CCANNNNNTGG 1 cut(s) 1205
VpaK11BI GGWCC 2 cut(s) 1044, 1408
XapI RAATTY 3 cut(s) 1087, 1430, 1534
XceI RCATGY 2 cut(s) 391, 574
XcmI CCANNNNNNNNNTGG 2 cut(s) 1138, 1628
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 1478
XspI CTAG 3 cut(s) 38, 917, 1647
ZrmI AGTACT 3 cut(s) 1280, 1478, 1651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.