Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004563

Physical Location & Seq

Genomic Coordinates Forward (+)

33893923 .. 33897465

Gene Structure 3543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1244200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGTAACCGCCATGAATGGTCAGAGTGAATCAGTGCAAATACCGTTCCCACTGTTGGTGCCTCTGTGTCTGTATATAAGAGGACCGATCCCTTACAAACATTCAACAAATTTAACAAAACCAATGAGAGACGCCATGTCTAAGATTCTTCGGGTTCTTGTTTCTCTTCTCTTTCTTCAAGCTTCTGCTTCATGGGCAGATTCGGATTCTGTGTACGACAGCTTTCTCCAATGCCTAAATACCAAAACGAAGTCATCAAACACAACCCAGTTGTCCAGCATAGTCTATGCCCAGAACAACCCTTCATACACACCAATTTTACAAGCCTACATCAGAAACTCCAGGTTCAACAGAACCTCCACCCCAAAACCACTCCTCGTCGTCACACCCTTAACCGAATCCCATGTCCAGGCCTCCGTCCTTTGCGCCAAGCTCGCCGGCGTACAGCTCAAAATCCGAAGCGGCGGCCACGATTACGAGGGTATTTCGTACTGGTCTAGCCAGACATTTATTGTTCTTGACATGTTTAATCTCAGGTCGATCGCGGTGAACATTGAGGACAACTCCGTTTGGGCTCAGGCCGGCGCCACGCTCGGAGAATTGTACTATAGGATTTGGGAGAAGAGCAAAGTTCACGCCTTTCCGGCGGGGATTTGCCAACTGGTTGGTGTTGGTGGACACATAAGTGGCGGCGGGTATGGTAACTTGCTTAGGAAGTATGGCCTTGCTGTCGACAATGTCCTTGATGCTCAGATTGTCAATGCGAACGGGGAACTTCTCGATCGAAAATCGATGGGGGAAGACTTGTTTTGGGCTATTAAAGGAGGAGGTGGTGGAAGCTTTGGAGTCATTATTTCGTACAAGTTGAAGTTGGTTTCTGTCCCGGAAGTTGTTACAATTTTTCGGGTTGAGAAAACGTTGGAGGAGGATGCAACCGCCCTAGTTTTGCGGTGGCAGGAGGTGGCGCCGACTACGGATGATGGGTTGTTCATGAGGCTGTTGTTGCAGCCTGTGAGTTCTAAAGTGAAGAAGGGTGAAAAGACTGTTAGAGCTACAGTTATGGCTGAGTTTCTAGGCAATGGCGATCAACTTGTGACATTGTTGGGAAAGGAGTTTCCTGAATTGGGGTTAACGAAGGAGAATTGTACTGAGACGAGCTGGATTGAATCCGTCCTCTGGTGGGCGAACTTCGACATTGGAACCTCTCCCGAAGCGTTGCTTGACAGAATGCCAAACGATGCAAATTTCTTGAAGAGGAAGTCTGATTATGTCCAAACCCCGATTTCAAAAGACGGGTTGGAGTGGCTATGGAAGAAAATGATCGAGCTAGGGAAAACAGGACTTGTTTTCAATCCGTACGGCGGGGAAATGAGCCGGATTGCGCCATCCGAGACGCCTTTTCCCCACCGTGCCGGAAACTTGTTCAAAATTCAGTACTCTGTGAACTGGGAGGATGCAGGGGAGGACTTAGAGAAGAACTACACCACAGAAAGCAAAAGGCTTTTCAGTTACATGACCCCATTTGTGTCAAAGAATCCAAGAAGTGCTTTTTTGAACTATAGGGACCTTGACATTGGTGCTAGTTCAAATGGGGCTCCTACTTATGAAGAAGGAAAGGTATACGGGGTGAAGTATTTCAATGACAATTTTGATAGGTTGGTGAAGGTGAAGACCGCCGTCGACCCCGAAAATTTCTTCTACAACGAGCAAAGCATCCCAATTCTTCCAAGTTCACATACAGATGTGAAAAGCGGATCAAATTCCAACATACCAACGGGGAAGCTACTCAGTTTACTGGTATACCTGCTTATTGCAGGTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

608

Amino Acids

67.43

Weight (kDa)

7.05

Isoelectric Point (pI)

36.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	124 - 260	2.3e-24	FAD binding domain
BBE	PF08031	516 - 573	1.2e-18	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01980 AT1G11770 AT4G20830 AT4G20830 AT4G20840
fragaria_vesca	FvH4_3g10960 FvH4_3g10990
malus_domestica	MD05G1267600.v1.1 MD10G1244200.v1.1
prunus_persica	Prupe.1G438500_v2.0.a1 Prupe.3G111900_v2.0.a1 Prupe.3G112100_v2.0.a1 Prupe.4G098300_v2.0.a1 Prupe.4G157300_v2.0.a1
pyrus_communis	pycom10g20420
rosa_chinensis	RchiOBHm_Chr4g0431091 RchiOBHm_Chr5g0017701
rosa_laevigata	RLG00000006926 RLG00000032306 RLG00000032307
rosa_multiflora	Rmu_sc0003415.1_g000004 Rmu_sc0003415.1_g000005 Rmu_sc0003592.1_g000010 Rmu_sc0010203.1_g000010
rosa_roxburghii	Rroxscaffold_1G00059780 Rroxscaffold_1G00059790
rosa_rugosa	Rorug05G0037400 Rorug05G0037400
rosa_wichuraiana	Rw4G026460 Rw5G011360 Rw5G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1805, 1812
AccB1I	GGYRCC	3 cut(s)	58, 584, 964
AccI	GTMKAC	4 cut(s)	732, 1620, 1680, 1800
AccII	CGCG	1 cut(s)	545
AclI	AACGTT	1 cut(s)	917
AclWI	GGATC	2 cut(s)	82, 1762
AcoI	YGGCCR	1 cut(s)	466
AcsI	RAATTY	5 cut(s)	109, 1243, 1428, 1690, 1759
AcyI	GRCGYC	4 cut(s)	132, 585, 965, 1394
AfaI	GTAC	8 cut(s)	215, 444, 491, 605, 860, 1147, 1358, 1436
AfiI	CCNNNNNNNGG	6 cut(s)	55, 409, 1124, 1176, 1180, 1361
AflIII	ACRYGT	1 cut(s)	522
AhdI	GACNNNNNGTC	1 cut(s)	136
AjnI	CCWGG	2 cut(s)	341, 408
AleI	CACNNNNGTG	1 cut(s)	684
AluBI	AGCT	9 cut(s)	182, 222, 433, 448, 840, 1052, 1158, 1327, 1783
AluI	AGCT	9 cut(s)	182, 222, 433, 448, 840, 1052, 1158, 1327, 1783
Alw26I	GTCTC	3 cut(s)	123, 1145, 1385
AlwI	GGATC	2 cut(s)	82, 1762
AoxI	GGCC	4 cut(s)	411, 466, 579, 721
ApeKI	GCWGC	1 cut(s)	1006
ApoI	RAATTY	5 cut(s)	109, 1243, 1428, 1690, 1759
ArsI	GACNNNNNNTTYG	2 cut(s)	390, 422
Asp700I	GAANNNNTTC	1 cut(s)	1634
AspLEI	GCGC	4 cut(s)	428, 587, 967, 1384
AspS9I	GGNCC	2 cut(s)	83, 1564
AsuC2I	CCSGG	1 cut(s)	884
AsuHPI	GGTGA	5 cut(s)	559, 1046, 1639, 1672, 1678
AvaII	GGWCC	2 cut(s)	83, 1564
BanI	GGYRCC	3 cut(s)	58, 584, 964
BanII	GRGCYC	2 cut(s)	577, 1597
BbsI	GAAGAC	2 cut(s)	807, 1676
BbvI	GCAGC	1 cut(s)	1018
BccI	CCATC	3 cut(s)	787, 974, 1393
BceAI	ACGGC	2 cut(s)	1375, 1661
BciT130I	CCWGG	2 cut(s)	343, 410
BcnI	CCSGG	1 cut(s)	884
BcoDI	GTCTC	3 cut(s)	123, 1145, 1385
BfaI	CTAG	5 cut(s)	498, 941, 1073, 1328, 1581
BfmI	CTRYAG	3 cut(s)	607, 1053, 1558
BfoI	RGCGCY	2 cut(s)	588, 968
BfuAI	ACCTGC	2 cut(s)	1805, 1812
BglI	GCCNNNNNGGC	1 cut(s)	644
BisI	GCNGC	4 cut(s)	463, 466, 691, 1007
BlsI	GCNGC	4 cut(s)	464, 467, 692, 1008
BmcAI	AGTACT	1 cut(s)	1436
Bme1390I	CCNGG	3 cut(s)	343, 410, 884
Bme18I	GGWCC	2 cut(s)	83, 1564
BmeRI	GACNNNNNGTC	1 cut(s)	136
BmgT120I	GGNCC	2 cut(s)	83, 1564
BmiI	GGNNCC	6 cut(s)	60, 586, 966, 1201, 1565, 1596
BmrFI	CCNGG	3 cut(s)	343, 410, 884
BmrI	ACTGGG	2 cut(s)	262, 1456
BmsI	GCATC	5 cut(s)	736, 919, 1228, 1444, 1722
BmuI	ACTGGG	2 cut(s)	262, 1456
BoxI	GACNNNNGTC	1 cut(s)	1676
BpiI	GAAGAC	2 cut(s)	807, 1676
BplI	GAGNNNNNCTC	2 cut(s)	548, 580
BpmI	CTGGAG	1 cut(s)	325
Bpu10I	CCTNAGC	2 cut(s)	576, 710
BpuMI	CCSGG	1 cut(s)	884
Bsa29I	ATCGAT	1 cut(s)	791
BsaHI	GRCGYC	4 cut(s)	132, 585, 965, 1394
BsaXI	ACNNNNNCTCC	2 cut(s)	341, 371
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 409, 1124, 1176, 1180, 1361
Bse118I	RCCGGY	2 cut(s)	437, 581
Bse1I	ACTGG	5 cut(s)	268, 497, 666, 1451, 1800
Bse3DI	GCAATG	1 cut(s)	1084
BseBI	CCWGG	2 cut(s)	343, 410
BseCI	ATCGAT	1 cut(s)	791
BseGI	GGATG	5 cut(s)	934, 982, 1385, 1459, 1713
BseLI	CCNNNNNNNGG	6 cut(s)	55, 409, 1124, 1176, 1180, 1361
BseMI	GCAATG	1 cut(s)	1084
BseMII	CTCAG	6 cut(s)	547, 590, 764, 1056, 1140, 1801
BseNI	ACTGG	5 cut(s)	268, 497, 666, 1451, 1800
BseRI	GAGGAG	3 cut(s)	365, 840, 938
BseXI	GCAGC	1 cut(s)	1018
Bsh1236I	CGCG	1 cut(s)	545
Bsh1285I	CGRYCG	2 cut(s)	543, 784
BshFI	GGCC	4 cut(s)	413, 468, 581, 723
BshNI	GGYRCC	3 cut(s)	58, 584, 964
BshVI	ATCGAT	1 cut(s)	791
BsiEI	CGRYCG	2 cut(s)	543, 784
BsiSI	CCGG	6 cut(s)	438, 582, 644, 884, 1375, 1413
BsiWI	CGTACG	1 cut(s)	1356
BslFI	GGGAC	2 cut(s)	866, 1577
BslI	CCNNNNNNNGG	6 cut(s)	55, 409, 1124, 1176, 1180, 1361
BsmAI	GTCTC	3 cut(s)	123, 1145, 1385
BsmBI	CGTCTC	3 cut(s)	123, 1145, 1385
BsmFI	GGGAC	2 cut(s)	866, 1577
BsmI	GAATGC	1 cut(s)	1233
BsnI	GGCC	4 cut(s)	413, 468, 581, 723
Bsp1286I	GDGCHC	2 cut(s)	577, 1597
Bsp143I	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
BspANI	GGCC	4 cut(s)	413, 468, 581, 723
BspCNI	CTCAG	6 cut(s)	546, 589, 763, 1057, 1141, 1800
BspDI	ATCGAT	1 cut(s)	791
BspFNI	CGCG	1 cut(s)	545
BspHI	TCATGA	1 cut(s)	990
BspLI	GGNNCC	6 cut(s)	60, 586, 966, 1201, 1565, 1596
BspMI	ACCTGC	2 cut(s)	1805, 1812
BspPI	GGATC	2 cut(s)	82, 1762
BspQI	GCTCTTC	1 cut(s)	617
BspT107I	GGYRCC	3 cut(s)	58, 584, 964
BsrDI	GCAATG	1 cut(s)	1084
BsrFI	RCCGGY	2 cut(s)	437, 581
BsrI	ACTGG	5 cut(s)	268, 497, 666, 1451, 1800
BssAI	RCCGGY	2 cut(s)	437, 581
BssMI	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
BssNAI	GTATAC	2 cut(s)	1621, 1801
BssNI	GRCGYC	4 cut(s)	132, 585, 965, 1394
Bst1107I	GTATAC	2 cut(s)	1621, 1801
Bst2UI	CCWGG	2 cut(s)	343, 410
Bst4CI	ACNGT	5 cut(s)	45, 54, 1045, 1057, 1409
Bst6I	CTCTTC	3 cut(s)	171, 617, 1247
BstACI	GRCGYC	4 cut(s)	132, 585, 965, 1394
BstC8I	GCNNGC	3 cut(s)	435, 439, 583
BstDEI	CTNAG	9 cut(s)	141, 533, 576, 710, 750, 1065, 1149, 1468, 1787
BstEII	GGTNACC	1 cut(s)	4
BstF5I	GGATG	5 cut(s)	934, 982, 1385, 1459, 1713
BstFNI	CGCG	1 cut(s)	545
BstH2I	RGCGCY	2 cut(s)	588, 968
BstHHI	GCGC	4 cut(s)	428, 587, 967, 1384
BstKTI	GATC	6 cut(s)	90, 543, 784, 1087, 1323, 1757
BstMAI	GTCTC	3 cut(s)	123, 1145, 1385
BstMBI	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
BstMCI	CGRYCG	2 cut(s)	543, 784
BstMWI	GCNNNNNNNGC	4 cut(s)	194, 434, 644, 1003
BstNI	CCWGG	2 cut(s)	343, 410
BstNSI	RCATGY	1 cut(s)	526
BstPAI	GACNNNNGTC	1 cut(s)	1676
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	3 cut(s)	341, 408, 882
BstSFI	CTRYAG	3 cut(s)	607, 1053, 1558
BstUI	CGCG	1 cut(s)	545
BstV1I	GCAGC	1 cut(s)	1018
BstV2I	GAAGAC	2 cut(s)	807, 1676
BstXI	CCANNNNNNTGG	1 cut(s)	665
BstZ17I	GTATAC	2 cut(s)	1621, 1801
Bsu15I	ATCGAT	1 cut(s)	791
BsuRI	GGCC	4 cut(s)	413, 468, 581, 723
BsuTUI	ATCGAT	1 cut(s)	791
BtsCI	GGATG	5 cut(s)	934, 982, 1385, 1459, 1713
BtsIMutI	CAGTG	2 cut(s)	39, 50
BveI	ACCTGC	2 cut(s)	1805, 1812
Cac8I	GCNNGC	3 cut(s)	435, 439, 583
CciI	TCATGA	1 cut(s)	990
CfoI	GCGC	4 cut(s)	428, 587, 967, 1384
Cfr10I	RCCGGY	2 cut(s)	437, 581
Cfr13I	GGNCC	2 cut(s)	83, 1564
ClaI	ATCGAT	1 cut(s)	791
CseI	GACGC	2 cut(s)	140, 1402
Csp6I	GTAC	8 cut(s)	214, 443, 490, 604, 859, 1146, 1357, 1435
CviAII	CATG	7 cut(s)	13, 136, 192, 404, 523, 991, 1513
CviQI	GTAC	8 cut(s)	214, 443, 490, 604, 859, 1146, 1357, 1435
DdeI	CTNAG	9 cut(s)	141, 533, 576, 710, 750, 1065, 1149, 1468, 1787
DinI	GGCGCC	2 cut(s)	586, 966
DpnI	GATC	6 cut(s)	89, 542, 783, 1086, 1322, 1756
DpnII	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
DriI	GACNNNNNGTC	1 cut(s)	136
EaeI	YGGCCR	1 cut(s)	466
Eam1104I	CTCTTC	3 cut(s)	171, 617, 1247
Eam1105I	GACNNNNNGTC	1 cut(s)	136
EarI	CTCTTC	3 cut(s)	171, 617, 1247
Eco147I	AGGCCT	1 cut(s)	413
Eco24I	GRGCYC	2 cut(s)	577, 1597
Eco47I	GGWCC	2 cut(s)	83, 1564
Eco91I	GGTNACC	1 cut(s)	4
EcoO109I	RGGNCCY	1 cut(s)	1564
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	341, 408
EcoT38I	GRGCYC	2 cut(s)	577, 1597
EgeI	GGCGCC	2 cut(s)	586, 966
EheI	GGCGCC	2 cut(s)	586, 966
Esp3I	CGTCTC	3 cut(s)	123, 1145, 1385
FaeI	CATG	7 cut(s)	16, 139, 195, 407, 526, 994, 1516
FalI	AAGNNNNNCTT	4 cut(s)	1203, 1235, 1531, 1563
FaqI	GGGAC	2 cut(s)	866, 1577
FatI	CATG	7 cut(s)	12, 135, 191, 403, 522, 990, 1512
FauI	CCCGC	3 cut(s)	640, 686, 1355
FblI	GTMKAC	4 cut(s)	732, 1620, 1680, 1800
Fnu4HI	GCNGC	4 cut(s)	463, 466, 691, 1007
FokI	GGATG	5 cut(s)	941, 989, 1372, 1466, 1700
FriOI	GRGCYC	2 cut(s)	577, 1597
Fsp4HI	GCNGC	4 cut(s)	463, 466, 691, 1007
FspBI	CTAG	5 cut(s)	498, 941, 1073, 1328, 1581
GlaI	GCGC	4 cut(s)	427, 586, 966, 1383
GluI	GCNGC	4 cut(s)	463, 466, 691, 1007
GsuI	CTGGAG	1 cut(s)	325
HaeII	RGCGCY	2 cut(s)	588, 968
HaeIII	GGCC	4 cut(s)	413, 468, 581, 723
HapII	CCGG	6 cut(s)	438, 582, 644, 884, 1375, 1413
HgaI	GACGC	2 cut(s)	140, 1402
HhaI	GCGC	4 cut(s)	428, 587, 967, 1384
Hin1I	GRCGYC	4 cut(s)	132, 585, 965, 1394
Hin1II	CATG	7 cut(s)	16, 139, 195, 407, 526, 994, 1516
Hin6I	GCGC	4 cut(s)	426, 585, 965, 1382
HinP1I	GCGC	4 cut(s)	426, 585, 965, 1382
HincII	GTYRAC	3 cut(s)	733, 1131, 1681
HindII	GTYRAC	3 cut(s)	733, 1131, 1681
HindIII	AAGCTT	2 cut(s)	180, 838
HinfI	GANTC	8 cut(s)	29, 145, 200, 206, 398, 846, 1166, 1534
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	6 cut(s)	438, 582, 644, 884, 1375, 1413
HphI	GGTGA	5 cut(s)	559, 1046, 1639, 1672, 1678
Hpy188I	TCNGA	8 cut(s)	24, 205, 335, 458, 596, 753, 1264, 1390
Hpy188III	TCNNGA	6 cut(s)	518, 779, 991, 1118, 1208, 1249
Hpy99I	CGWCG	2 cut(s)	383, 1682
HpyAV	CCTTC	5 cut(s)	312, 1024, 1129, 1604, 1657
HpyCH4III	ACNGT	5 cut(s)	45, 54, 1045, 1057, 1409
HpyCH4IV	ACGT	1 cut(s)	917
HpyCH4V	TGCA	6 cut(s)	37, 932, 1006, 1241, 1457, 1814
HpyF10VI	GCNNNNNNNGC	4 cut(s)	194, 434, 644, 1003
HpyF3I	CTNAG	9 cut(s)	141, 533, 576, 710, 750, 1065, 1149, 1468, 1787
HpySE526I	ACGT	1 cut(s)	917
Hsp92I	GRCGYC	4 cut(s)	132, 585, 965, 1394
Hsp92II	CATG	7 cut(s)	16, 139, 195, 407, 526, 994, 1516
HspAI	GCGC	4 cut(s)	426, 585, 965, 1382
KasI	GGCGCC	2 cut(s)	584, 964
KroI	GCCGGC	2 cut(s)	437, 581
KroNI	GCCGGC	2 cut(s)	439, 583
KspAI	GTTAAC	1 cut(s)	1131
Kzo9I	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
LguI	GCTCTTC	1 cut(s)	617
LmnI	GCTCC	1 cut(s)	1600
Lsp1109I	GCAGC	1 cut(s)	1018
LweI	GCATC	5 cut(s)	736, 919, 1228, 1444, 1722
MaeI	CTAG	5 cut(s)	498, 941, 1073, 1328, 1581
MaeII	ACGT	1 cut(s)	917
MaeIII	GTNAC	6 cut(s)	4, 382, 701, 892, 1093, 1508
MalI	GATC	6 cut(s)	89, 542, 783, 1086, 1322, 1756
MboI	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
MhlI	GDGCHC	2 cut(s)	577, 1597
Mly113I	GGCGCC	2 cut(s)	585, 965
MlyI	GAGTC	1 cut(s)	855
MmeI	TCCRAC	3 cut(s)	900, 1278, 1788
MreI	CGCCGGCG	1 cut(s)	437
MroNI	GCCGGC	2 cut(s)	437, 581
MroXI	GAANNNNTTC	1 cut(s)	1634
MseI	TTAA	5 cut(s)	113, 392, 528, 819, 1130
MslI	CAYNNNNRTG	2 cut(s)	684, 1740
MspI	CCGG	6 cut(s)	438, 582, 644, 884, 1375, 1413
MspR9I	CCNGG	3 cut(s)	343, 410, 884
Mva1269I	GAATGC	1 cut(s)	1233
MvaI	CCWGG	2 cut(s)	343, 410
MvnI	CGCG	1 cut(s)	545
MwoI	GCNNNNNNNGC	4 cut(s)	194, 434, 644, 1003
NaeI	GCCGGC	2 cut(s)	439, 583
NarI	GGCGCC	2 cut(s)	585, 965
NciI	CCSGG	1 cut(s)	884
NdeII	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
NgoMIV	GCCGGC	2 cut(s)	437, 581
NlaIII	CATG	7 cut(s)	16, 139, 195, 407, 526, 994, 1516
NlaIV	GGNNCC	6 cut(s)	60, 586, 966, 1201, 1565, 1596
NmuCI	GTSAC	2 cut(s)	382, 1093
NspI	RCATGY	1 cut(s)	526
OliI	CACNNNNGTG	1 cut(s)	684
PagI	TCATGA	1 cut(s)	990
PceI	AGGCCT	1 cut(s)	413
PciI	ACATGT	1 cut(s)	522
PciSI	GCTCTTC	1 cut(s)	617
PctI	GAATGC	1 cut(s)	1233
PdiI	GCCGGC	2 cut(s)	439, 583
PdmI	GAANNNNTTC	1 cut(s)	1634
PfeI	GAWTC	7 cut(s)	29, 145, 200, 206, 398, 1166, 1534
Pfl23II	CGTACG	1 cut(s)	1356
PflFI	GACNNNGTC	1 cut(s)	737
PfoI	TCCNGGA	1 cut(s)	882
PkrI	GCNGC	4 cut(s)	464, 467, 692, 1008
Ple19I	CGATCG	2 cut(s)	543, 784
PleI	GAGTC	1 cut(s)	854
PluTI	GGCGCC	2 cut(s)	588, 968
PpsI	GAGTC	1 cut(s)	854
PpuMI	RGGWCCY	1 cut(s)	1564
PscI	ACATGT	1 cut(s)	522
PshAI	GACNNNNGTC	1 cut(s)	1676
Psp1406I	AACGTT	1 cut(s)	917
Psp5II	RGGWCCY	1 cut(s)	1564
Psp6I	CCWGG	2 cut(s)	341, 408
PspEI	GGTNACC	1 cut(s)	4
PspGI	CCWGG	2 cut(s)	341, 408
PspLI	CGTACG	1 cut(s)	1356
PspN4I	GGNNCC	6 cut(s)	60, 586, 966, 1201, 1565, 1596
PspPI	GGNCC	2 cut(s)	83, 1564
PspPPI	RGGWCCY	1 cut(s)	1564
PsyI	GACNNNGTC	1 cut(s)	737
PvuI	CGATCG	2 cut(s)	543, 784
RsaI	GTAC	8 cut(s)	215, 444, 491, 605, 860, 1147, 1358, 1436
RsaNI	GTAC	8 cut(s)	214, 443, 490, 604, 859, 1146, 1357, 1435
RseI	CAYNNNNRTG	2 cut(s)	684, 1740
SalI	GTCGAC	2 cut(s)	731, 1679
SapI	GCTCTTC	1 cut(s)	617
SaqAI	TTAA	5 cut(s)	113, 392, 528, 819, 1130
SatI	GCNGC	4 cut(s)	463, 466, 691, 1007
Sau3AI	GATC	6 cut(s)	87, 540, 781, 1084, 1320, 1754
Sau96I	GGNCC	2 cut(s)	83, 1564
ScaI	AGTACT	1 cut(s)	1436
SchI	GAGTC	1 cut(s)	855
ScrFI	CCNGG	3 cut(s)	343, 410, 884
SduI	GDGCHC	2 cut(s)	577, 1597
SfaNI	GCATC	5 cut(s)	736, 919, 1228, 1444, 1722
SfcI	CTRYAG	3 cut(s)	607, 1053, 1558
SfoI	GGCGCC	2 cut(s)	586, 966
SgrAI	CRCCGGYG	1 cut(s)	437
SinI	GGWCC	2 cut(s)	83, 1564
SmiMI	CAYNNNNRTG	2 cut(s)	684, 1740
SseBI	AGGCCT	1 cut(s)	413
SspDI	GGCGCC	2 cut(s)	584, 964
SspMI	CTAG	5 cut(s)	498, 941, 1073, 1328, 1581
StuI	AGGCCT	1 cut(s)	413
StyD4I	CCNGG	3 cut(s)	341, 408, 882
TaaI	ACNGT	5 cut(s)	45, 54, 1045, 1057, 1409
TaiI	ACGT	1 cut(s)	920
TaqI	TCGA	8 cut(s)	539, 732, 780, 784, 791, 1191, 1323, 1680
TaqII	GACCGA	1 cut(s)	100
TatI	WGTACW	3 cut(s)	603, 1145, 1434
TauI	GCSGC	3 cut(s)	465, 468, 693
TfiI	GAWTC	7 cut(s)	29, 145, 200, 206, 398, 1166, 1534
Tru1I	TTAA	5 cut(s)	113, 392, 528, 819, 1130
Tru9I	TTAA	5 cut(s)	113, 392, 528, 819, 1130
TscAI	CASTG	2 cut(s)	39, 57
TseFI	GTSAC	2 cut(s)	382, 1093
TseI	GCWGC	1 cut(s)	1006
Tsp45I	GTSAC	2 cut(s)	382, 1093
TspDTI	ATGAA	5 cut(s)	29, 180, 294, 979, 1620
TspGWI	ACGGA	5 cut(s)	406, 556, 989, 1159, 1344
TspRI	CASTG	2 cut(s)	39, 57
Tth111I	GACNNNGTC	1 cut(s)	737
VpaK11BI	GGWCC	2 cut(s)	83, 1564
XapI	RAATTY	5 cut(s)	109, 1243, 1428, 1690, 1759
XceI	RCATGY	1 cut(s)	526
XmiI	GTMKAC	4 cut(s)	732, 1620, 1680, 1800
XmnI	GAANNNNTTC	1 cut(s)	1634
XspI	CTAG	5 cut(s)	498, 941, 1073, 1328, 1581
ZrmI	AGTACT	1 cut(s)	1436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.