Prupe.4G098300_v2.0.a1

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
4988904 .. 4992398
3495 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G098300.1

Sequence Viewer

Length: 1701 bp
ATGAGAAGCACAATGCCTAGAATTCTTCCACTTGCTGTTTTGTTTGTTGTTTTTTATGTTTCTGCATCATGGGCAGCCTCTGGTTCTGTCTATGACAACTTTGTTCAATGCCTGAACACAAAAGCAAACTCATCATCTTCAACTCCATTGGCAAACATAGTTTTTGCCCAAAACAACCCTTCATACACATCTGTGCTAAGAGCCTACATCAGAAATTCCAGGTTCAACAAAACCTCAACGCCAAAACCAGTGCTCATAGTCACCCCCTCAGCTGAATCCCATGTCCAGGCCTCTGTCCTCTGCGCAAAGCAGCTTGGCATACAGCTCAAAATCCGAAGCGGCGGCCACGATTATGAGGGTGTTTCTTATTGGTCTGATCAGACTTTTATTGTTCTTGACATGTTTAATCTCAGGAGTATCACTGTGGACATCAAAGACGGTTCTGTTTGGGCTCAGGCTGGAGCCACACTTGGAGAAATGTACTATAGGATTTGGGAGAAGAGCAAAGTTCATGGCTTTCCTGCTGGAGTTTGTGAAACAGTTGGTGTTGGTGGGCACATAAGTGGTGGCGGCTATGGAAACATGTTGAGGAAGTATGGCCTTGCTGTGGACAATGTCATTGATGCTCAGATTGTTGATGTTCAGGGGAGGCTTCTTGACAGAAAATCAATGGGAGAAGACCTCTTTTGGGCTATTAAAGGAGGAGGTGGAGGAAGCTTTGGAGTTATTATTTCATACAAATTGAAGTTGGTTTCTGTGCCTGAAATTGTTACAGTGTTCCGGGTGGAGAGAACCTTGGAAGAGAATGCAACCGCCGTCGTTTTGAAGTGGCAAGAGGTGGCGCCAACCACAGACGATGGTCTTTTTATGAGGATGCTTTTGCAGCCTGTGACTTCTAAAGTGAAGAAGGGTGAGAAGACTGTTAGAATCTCAATTTTGGCCGAGTTTCTTGGCAATGCCGACCAACTTGTGTCATTGTTGGGGAAGGAGTTTCCTGAATTGGGTTTGAAGAAGGAGAACTGTATGGAGATGAGTTGGATTGACTCTGTGCTTTGGTGGGCTAATTTTGATAATCGGACTAAACCTGAAGCGTTGCTCAATAGAAATCCCAATGATGCAAATTTCCTGAAAAGGAAGTCTGATTATGTTCAAACCGCAATCTCCAAAGATGGGTTGGAGTGGTTATGGAAGAAGATGATTGAGCTTGGCAAAACAGGGTTGGTGTTCAATCCATATGGTGGGAAAATGAGCCAAATTCCGGCCTCTGAGACTCCTTTTCCACACCGTGCAGGGAACTTGTTCAAAATTCAGTACTCAGTGAATTGGGAAGATGCAGGAGAGGAGTCAGAGAAGAATTATCTCACACAAAGCAGGAGGCTTTACAGTTACATGACCCCATTTGTGTCCAAGAACCCAAGAAGTGCTTTCTTGAATTACAGGGACCTTGACATTGGTGTCAATACATTTGGTGACAATAGCTATGAAGAAGGGAAGGTTTATGGATTGAAGTACTTCAATGACAACTTTGATAGGTTGCTGAAGGTGAAGACTGCTGTTGATCCAGAAAATTTCTTCAGGAACGAGCAGAGTATCCCTACTCTTCCAAATGGAAACTCAGACGTGAATAGCAGGTCAAGTTCCAACTTACCAATGGGGAAGCCATTCGTTCTACTGATATGCTTGCTTATCGGAGGTTGGTAA

Protein Analysis

567

Amino Acids

63.18

Weight (kDa)

8.86

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1454
Acc16I TGCGCA 1 cut(s) 304
Acc36I ACCTGC 1 cut(s) 1620
AccB1I GGYRCC 1 cut(s) 841
AccB7I CCANNNNNTGG 1 cut(s) 1238
AciI CCGC 5 cut(s) 339, 342, 570, 813, 1155
AclWI GGATC 1 cut(s) 1553
AcoI YGGCCR 2 cut(s) 343, 939
AcsI RAATTY 6 cut(s) 21, 214, 1120, 1254, 1305, 1567
AcuI CTGAAG 3 cut(s) 1107, 1558, 1559
AcyI GRCGYC 1 cut(s) 842
AdeI CACNNNGTG 1 cut(s) 1286
AfaI GTAC 3 cut(s) 482, 1313, 1511
AfiI CCNNNNNNNGG 7 cut(s) 286, 607, 688, 1001, 1170, 1238, 1258
AflIII ACRYGT 2 cut(s) 399, 582
AjiI CACGTC 1 cut(s) 1621
AjnI CCWGG 2 cut(s) 218, 285
AleI CACNNNNGTG 2 cut(s) 191, 561
AluBI AGCT 6 cut(s) 272, 313, 325, 717, 1204, 1479
AluI AGCT 6 cut(s) 272, 313, 325, 717, 1204, 1479
Alw21I GWGCWC 1 cut(s) 255
Alw26I GTCTC 1 cut(s) 1262
AlwI GGATC 1 cut(s) 1553
AlwNI CAGNNNCTG 1 cut(s) 80
AoxI GGCC 5 cut(s) 288, 343, 598, 939, 1260
ApeKI GCWGC 3 cut(s) 74, 310, 883
ApoI RAATTY 6 cut(s) 21, 214, 1120, 1254, 1305, 1567
Asp700I GAANNNNTTC 3 cut(s) 1298, 1511, 1661
AspLEI GCGC 2 cut(s) 305, 844
AspS9I GGNCC 1 cut(s) 1441
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 4 cut(s) 253, 923, 1481, 1555
AvaII GGWCC 1 cut(s) 1441
BaeGI GKGCMC 1 cut(s) 558
BanI GGYRCC 1 cut(s) 841
BanII GRGCYC 1 cut(s) 454
BbsI GAAGAC 3 cut(s) 684, 923, 1553
Bbv12I GWGCWC 1 cut(s) 255
BbvCI CCTCAGC 1 cut(s) 268
BbvI GCAGC 3 cut(s) 86, 322, 895
BccI CCATC 2 cut(s) 851, 1163
BceAI ACGGC 1 cut(s) 800
BciT130I CCWGG 2 cut(s) 220, 287
BciVI GTATCC 1 cut(s) 1601
BclI TGATCA 1 cut(s) 376
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 1 cut(s) 1262
BfaI CTAG 1 cut(s) 18
BfmI CTRYAG 1 cut(s) 484
BfoI RGCGCY 1 cut(s) 845
BfuAI ACCTGC 1 cut(s) 1620
BfuI GTATCC 1 cut(s) 1601
BisI GCNGC 6 cut(s) 75, 311, 340, 343, 571, 884
BlsI GCNGC 6 cut(s) 76, 312, 341, 344, 572, 885
BmcAI AGTACT 2 cut(s) 1313, 1511
Bme1390I CCNGG 3 cut(s) 220, 287, 782
Bme18I GGWCC 1 cut(s) 1441
BmgBI CACGTC 1 cut(s) 1621
BmgT120I GGNCC 1 cut(s) 1441
BmiI GGNNCC 3 cut(s) 463, 843, 1442
BmrFI CCNGG 3 cut(s) 220, 287, 782
BmsI GCATC 5 cut(s) 74, 613, 864, 1105, 1321
BoxI GACNNNNGTC 1 cut(s) 858
BpiI GAAGAC 3 cut(s) 684, 923, 1553
BplI GAGNNNNNCTC 2 cut(s) 666, 698
BpmI CTGGAG 2 cut(s) 480, 546
Bpu10I CCTNAGC 2 cut(s) 268, 453
BpuMI CCSGG 1 cut(s) 782
BsaHI GRCGYC 1 cut(s) 842
BsaJI CCNNGG 1 cut(s) 795
Bsc4I CCNNNNNNNGG 7 cut(s) 286, 607, 688, 1001, 1170, 1238, 1258
Bse1I ACTGG 1 cut(s) 248
Bse3DI GCAATG 1 cut(s) 961
BseBI CCWGG 2 cut(s) 220, 287
BseDI CCNNGG 1 cut(s) 795
BseGI GGATG 1 cut(s) 879
BseLI CCNNNNNNNGG 7 cut(s) 286, 607, 688, 1001, 1170, 1238, 1258
BseMI GCAATG 1 cut(s) 961
BseMII CTCAG 7 cut(s) 282, 424, 467, 641, 1257, 1329, 1629
BseNI ACTGG 1 cut(s) 248
BseRI GAGGAG 2 cut(s) 717, 1355
BseSI GKGCMC 1 cut(s) 558
BseXI GCAGC 3 cut(s) 86, 322, 895
BsgI GTGCAG 1 cut(s) 1308
BshFI GGCC 5 cut(s) 290, 345, 600, 941, 1262
BshNI GGYRCC 1 cut(s) 841
BsiHKAI GWGCWC 1 cut(s) 255
BsiSI CCGG 2 cut(s) 781, 1259
BslFI GGGAC 1 cut(s) 1454
BslI CCNNNNNNNGG 7 cut(s) 286, 607, 688, 1001, 1170, 1238, 1258
BsmAI GTCTC 1 cut(s) 1262
BsmFI GGGAC 1 cut(s) 1454
BsmI GAATGC 1 cut(s) 811
BsnI GGCC 5 cut(s) 290, 345, 600, 941, 1262
Bsp1286I GDGCHC 3 cut(s) 255, 454, 558
Bsp143I GATC 2 cut(s) 376, 1558
BspACI CCGC 5 cut(s) 339, 342, 570, 813, 1155
BspANI GGCC 5 cut(s) 290, 345, 600, 941, 1262
BspCNI CTCAG 7 cut(s) 281, 423, 466, 640, 1258, 1328, 1628
BspLI GGNNCC 3 cut(s) 463, 843, 1442
BspMI ACCTGC 1 cut(s) 1620
BspPI GGATC 1 cut(s) 1553
BspQI GCTCTTC 1 cut(s) 494
BspT107I GGYRCC 1 cut(s) 841
BsrDI GCAATG 1 cut(s) 961
BsrI ACTGG 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 795
BssMI GATC 2 cut(s) 376, 1558
BssNI GRCGYC 1 cut(s) 842
BssT1I CCWWGG 1 cut(s) 795
Bst2UI CCWGG 2 cut(s) 220, 287
Bst4CI ACNGT 8 cut(s) 424, 440, 541, 775, 922, 1022, 1286, 1385
Bst6I CTCTTC 3 cut(s) 494, 795, 1605
BstACI GRCGYC 1 cut(s) 842
BstC8I GCNNGC 1 cut(s) 1682
BstDEI CTNAG 8 cut(s) 197, 268, 410, 453, 627, 1266, 1315, 1615
BstF5I GGATG 1 cut(s) 879
BstH2I RGCGCY 1 cut(s) 845
BstHHI GCGC 2 cut(s) 305, 844
BstKTI GATC 2 cut(s) 379, 1561
BstMAI GTCTC 1 cut(s) 1262
BstMBI GATC 2 cut(s) 376, 1558
BstMWI GCNNNNNNNGC 2 cut(s) 71, 883
BstNI CCWGG 2 cut(s) 220, 287
BstNSI RCATGY 2 cut(s) 403, 586
BstPAI GACNNNNGTC 1 cut(s) 858
BstSCI CCNGG 3 cut(s) 218, 285, 780
BstSFI CTRYAG 1 cut(s) 484
BstSLI GKGCMC 1 cut(s) 558
BstV1I GCAGC 3 cut(s) 86, 322, 895
BstV2I GAAGAC 3 cut(s) 684, 923, 1553
BsuI GTATCC 1 cut(s) 1601
BsuRI GGCC 5 cut(s) 290, 345, 600, 941, 1262
BtrI CACGTC 1 cut(s) 1621
BtsCI GGATG 1 cut(s) 879
BtsIMutI CAGTG 4 cut(s) 255, 420, 780, 1323
BveI ACCTGC 1 cut(s) 1620
Cac8I GCNNGC 1 cut(s) 1682
CaiI CAGNNNCTG 1 cut(s) 80
CfoI GCGC 2 cut(s) 305, 844
Cfr13I GGNCC 1 cut(s) 1441
Csp6I GTAC 3 cut(s) 481, 1312, 1510
CviAII CATG 6 cut(s) 69, 281, 400, 512, 583, 1390
CviQI GTAC 3 cut(s) 481, 1312, 1510
DdeI CTNAG 8 cut(s) 197, 268, 410, 453, 627, 1266, 1315, 1615
DinI GGCGCC 1 cut(s) 843
DpnI GATC 2 cut(s) 378, 1560
DpnII GATC 2 cut(s) 376, 1558
DraIII CACNNNGTG 1 cut(s) 1286
DrdI GACNNNNNNGTC 1 cut(s) 1454
DseDI GACNNNNNNGTC 1 cut(s) 1454
EaeI YGGCCR 2 cut(s) 343, 939
Eam1104I CTCTTC 3 cut(s) 494, 795, 1605
EarI CTCTTC 3 cut(s) 494, 795, 1605
Eco130I CCWWGG 1 cut(s) 795
Eco147I AGGCCT 1 cut(s) 290
Eco24I GRGCYC 1 cut(s) 454
Eco47I GGWCC 1 cut(s) 1441
Eco57I CTGAAG 3 cut(s) 1107, 1558, 1559
EcoO109I RGGNCCY 1 cut(s) 1441
EcoRI GAATTC 1 cut(s) 21
EcoRII CCWGG 2 cut(s) 218, 285
EcoT14I CCWWGG 1 cut(s) 795
EcoT38I GRGCYC 1 cut(s) 454
EgeI GGCGCC 1 cut(s) 843
EheI GGCGCC 1 cut(s) 843
ErhI CCWWGG 1 cut(s) 795
FaeI CATG 6 cut(s) 72, 284, 403, 515, 586, 1393
FalI AAGNNNNNCTT 2 cut(s) 1408, 1440
FaqI GGGAC 1 cut(s) 1454
FatI CATG 6 cut(s) 68, 280, 399, 511, 582, 1389
FauNDI CATATG 1 cut(s) 1234
FbaI TGATCA 1 cut(s) 376
Fnu4HI GCNGC 6 cut(s) 75, 311, 340, 343, 571, 884
FokI GGATG 1 cut(s) 886
FriOI GRGCYC 1 cut(s) 454
Fsp4HI GCNGC 6 cut(s) 75, 311, 340, 343, 571, 884
FspBI CTAG 1 cut(s) 18
FspI TGCGCA 1 cut(s) 304
GlaI GCGC 2 cut(s) 304, 843
GluI GCNGC 6 cut(s) 75, 311, 340, 343, 571, 884
GsuI CTGGAG 2 cut(s) 480, 546
HaeII RGCGCY 1 cut(s) 845
HaeIII GGCC 5 cut(s) 290, 345, 600, 941, 1262
HapII CCGG 2 cut(s) 781, 1259
HhaI GCGC 2 cut(s) 305, 844
Hin1I GRCGYC 1 cut(s) 842
Hin1II CATG 6 cut(s) 72, 284, 403, 515, 586, 1393
Hin6I GCGC 2 cut(s) 303, 842
HinP1I GCGC 2 cut(s) 303, 842
HindIII AAGCTT 1 cut(s) 715
HinfI GANTC 5 cut(s) 275, 927, 1043, 1270, 1343
HpaII CCGG 2 cut(s) 781, 1259
HphI GGTGA 4 cut(s) 253, 923, 1481, 1555
Hpy166II GTNNAC 2 cut(s) 427, 610
Hpy188III TCNNGA 8 cut(s) 395, 412, 656, 995, 1126, 1429, 1562, 1576
Hpy8I GTNNAC 2 cut(s) 427, 610
Hpy99I CGWCG 1 cut(s) 821
HpyAV CCTTC 7 cut(s) 189, 901, 979, 1006, 1481, 1486, 1534
HpyCH4III ACNGT 8 cut(s) 424, 440, 541, 775, 922, 1022, 1286, 1385
HpyCH4IV ACGT 1 cut(s) 1620
HpyCH4V TGCA 6 cut(s) 65, 809, 883, 1118, 1289, 1334
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 883
HpyF3I CTNAG 8 cut(s) 197, 268, 410, 453, 627, 1266, 1315, 1615
HpySE526I ACGT 1 cut(s) 1620
Hsp92I GRCGYC 1 cut(s) 842
Hsp92II CATG 6 cut(s) 72, 284, 403, 515, 586, 1393
HspAI GCGC 2 cut(s) 303, 842
KasI GGCGCC 1 cut(s) 841
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 2 cut(s) 376, 1558
LguI GCTCTTC 1 cut(s) 494
LmnI GCTCC 1 cut(s) 461
Lsp1109I GCAGC 3 cut(s) 86, 322, 895
LweI GCATC 5 cut(s) 74, 613, 864, 1105, 1321
MaeI CTAG 1 cut(s) 18
MaeII ACGT 1 cut(s) 1620
MaeIII GTNAC 5 cut(s) 259, 769, 889, 1385, 1469
MalI GATC 2 cut(s) 378, 1560
MboI GATC 2 cut(s) 376, 1558
MhlI GDGCHC 3 cut(s) 255, 454, 558
Mly113I GGCGCC 1 cut(s) 842
MlyI GAGTC 3 cut(s) 1037, 1264, 1352
MmeI TCCRAC 3 cut(s) 1016, 1155, 1665
MroXI GAANNNNTTC 3 cut(s) 1298, 1511, 1661
MseI TTAA 2 cut(s) 405, 696
MslI CAYNNNNRTG 3 cut(s) 191, 351, 561
MspA1I CMGCKG 1 cut(s) 272
MspI CCGG 2 cut(s) 781, 1259
MspR9I CCNGG 3 cut(s) 220, 287, 782
Mva1269I GAATGC 1 cut(s) 811
MvaI CCWGG 2 cut(s) 220, 287
MwoI GCNNNNNNNGC 2 cut(s) 71, 883
NarI GGCGCC 1 cut(s) 842
NciI CCSGG 1 cut(s) 782
NdeI CATATG 1 cut(s) 1234
NdeII GATC 2 cut(s) 376, 1558
NlaIII CATG 6 cut(s) 72, 284, 403, 515, 586, 1393
NlaIV GGNNCC 3 cut(s) 463, 843, 1442
NmeAIII GCCGAG 1 cut(s) 967
NmuCI GTSAC 3 cut(s) 259, 889, 1469
NsbI TGCGCA 1 cut(s) 304
NspI RCATGY 2 cut(s) 403, 586
OliI CACNNNNGTG 2 cut(s) 191, 561
PceI AGGCCT 1 cut(s) 290
PciI ACATGT 2 cut(s) 399, 582
PciSI GCTCTTC 1 cut(s) 494
PctI GAATGC 1 cut(s) 811
PdmI GAANNNNTTC 3 cut(s) 1298, 1511, 1661
PfeI GAWTC 2 cut(s) 275, 927
PflFI GACNNNGTC 1 cut(s) 614
PflMI CCANNNNNTGG 1 cut(s) 1238
PkrI GCNGC 6 cut(s) 76, 312, 341, 344, 572, 885
PleI GAGTC 3 cut(s) 1037, 1264, 1351
PluTI GGCGCC 1 cut(s) 845
PpsI GAGTC 3 cut(s) 1037, 1264, 1351
PpuMI RGGWCCY 1 cut(s) 1441
PscI ACATGT 2 cut(s) 399, 582
PshAI GACNNNNGTC 1 cut(s) 858
Psp5II RGGWCCY 1 cut(s) 1441
Psp6I CCWGG 2 cut(s) 218, 285
PspGI CCWGG 2 cut(s) 218, 285
PspN4I GGNNCC 3 cut(s) 463, 843, 1442
PspPI GGNCC 1 cut(s) 1441
PspPPI RGGWCCY 1 cut(s) 1441
PstNI CAGNNNCTG 1 cut(s) 80
PsyI GACNNNGTC 1 cut(s) 614
PvuII CAGCTG 1 cut(s) 272
RsaI GTAC 3 cut(s) 482, 1313, 1511
RsaNI GTAC 3 cut(s) 481, 1312, 1510
RseI CAYNNNNRTG 3 cut(s) 191, 351, 561
SapI GCTCTTC 1 cut(s) 494
SaqAI TTAA 2 cut(s) 405, 696
SatI GCNGC 6 cut(s) 75, 311, 340, 343, 571, 884
Sau3AI GATC 2 cut(s) 376, 1558
Sau96I GGNCC 1 cut(s) 1441
ScaI AGTACT 2 cut(s) 1313, 1511
SchI GAGTC 3 cut(s) 1037, 1264, 1352
ScrFI CCNGG 3 cut(s) 220, 287, 782
SduI GDGCHC 3 cut(s) 255, 454, 558
SfaNI GCATC 5 cut(s) 74, 613, 864, 1105, 1321
SfcI CTRYAG 1 cut(s) 484
SfoI GGCGCC 1 cut(s) 843
SinI GGWCC 1 cut(s) 1441
SmiMI CAYNNNNRTG 3 cut(s) 191, 351, 561
SseBI AGGCCT 1 cut(s) 290
SsiI CCGC 5 cut(s) 339, 342, 570, 813, 1155
SspDI GGCGCC 1 cut(s) 841
SspMI CTAG 1 cut(s) 18
StuI AGGCCT 1 cut(s) 290
StyD4I CCNGG 3 cut(s) 218, 285, 780
StyI CCWWGG 1 cut(s) 795
TaaI ACNGT 8 cut(s) 424, 440, 541, 775, 922, 1022, 1286, 1385
TaiI ACGT 1 cut(s) 1623
TatI WGTACW 3 cut(s) 480, 1311, 1509
TauI GCSGC 3 cut(s) 342, 345, 573
TfiI GAWTC 2 cut(s) 275, 927
Tru1I TTAA 2 cut(s) 405, 696
Tru9I TTAA 2 cut(s) 405, 696
TscAI CASTG 4 cut(s) 255, 427, 780, 1323
TseFI GTSAC 3 cut(s) 259, 889, 1469
TseI GCWGC 3 cut(s) 74, 310, 883
Tsp45I GTSAC 3 cut(s) 259, 889, 1469
TspDTI ATGAA 4 cut(s) 171, 500, 723, 1497
TspRI CASTG 4 cut(s) 255, 427, 780, 1323
Tth111I GACNNNGTC 1 cut(s) 614
Van91I CCANNNNNTGG 1 cut(s) 1238
VpaK11BI GGWCC 1 cut(s) 1441
XapI RAATTY 6 cut(s) 21, 214, 1120, 1254, 1305, 1567
XceI RCATGY 2 cut(s) 403, 586
XcmI CCANNNNNNNNNTGG 2 cut(s) 1171, 1648
XmnI GAANNNNTTC 3 cut(s) 1298, 1511, 1661
XspI CTAG 1 cut(s) 18
ZrmI AGTACT 2 cut(s) 1313, 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.