AT1G10390

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007827
Physical Location & Seq
Reverse (-)
3406956 .. 3412874
5919 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10390.1

Sequence Viewer

Length: 3126 bp
ATGTTTGGCTCATCTAATCCTTTTGGACAGTCATCTGGTACCAGCCCATTTGGGTCTCAATCTTTGTTTGGTCAGACCAGCAATACAAGTAGTAATAATCCCTTTGCTCCAGCTACACCGTTTGGCACGTCTGCTCCTTTTGCTGCACAGTCGGGAAGTTCAATATTCGGAAGCACTTCAACCGGTGTTTTTGGTGCACCTCAAACATCCTCTCCCTTTGCCTCCACCCCAACTTTTGGAGCTTCTTCATCACCAGCATTTGGGAATTCTACTCCGGCCTTTGGAGCATCTCCAGCATCTTCACCTTTTGGTGGATCTTCTGGTTTTGGGCAGAAACCTTTGGGATTTTCAACGCCTCAGTCAAATCCTTTTGGAAACTCCACGCAGCAATCCCAACCTGCATTTGGAAACACCTCTTTTGGTTCGTCTACACCTTTTGGTGCCACTAACACGCCTGCCTTTGGCGCTCCAAGCACGCCTTCTTTTGGCGCCACAAGCACACCCTCGTTTGGTGCATCAAGCACGCCTGCCTTTGGTGCCACAAACACGCCTGCCTTCGGTGCCTCAAACTCTCCCTCCTTTGGCGCCACAAACACACCTGCATTTGGCGCGTCACCGACTCCAGCTTTTGGTAGCACTGGCACCACGTTTGGTAACACTGGCTTTGGTTCTGGAGGTGCTTTTGGAGCTTCAAACACCCCTGCTTTTGGTGCATCAGGCACTCCGGCTTTTGGTGCATCAGGCACTCCTGCCTTCGGTGCATCAAGTACTCCTGCCTTTGGGGCATCCAGTACTCCTGCCTTTGGGGCATCCAGTACTCCTGCCTTTGGGGGATCTAGTACTCCTTCTTTTGGTGCGTCAAATACCTCATCCTTTAGTTTTGGCTCGTCTCCAGCTTTTGGCCAGTCTACATCAGCCTTTGGTAGCAGCGCCTTTGGCTCTACACCATCTCCCTTTGGAGGTGCGCAGGCTTCAACCCCTACATTTGGGGGTTCTGGTTTTGGTCAATCAACTTTCGGTGGTCAACAAGGGGGCAGTCGAGCTGTGCCTTATGCACCAACTGTTGAGGCAGACACAGGGACCGGCACTCAGCCTGCTGGAAAGTTGGAATCTATTTCTGCCATGCCAGCATACAAAGAGAAAAACTATGAGGAGCTGAGGTGGGAAGATTACCAGCGAGGAGATAAAGGTGGACCACTTCCTGCTGGCCAGTCTCCTGGCAATGCCGGATTTGGTATATCACCTTCTCAACCAAATCCATTTTCTCCATCACCGGCGTTTGGTCAGACATCAGCAAATCCAACAAACCCTTTTTCGAGCTCAACATCTACCAACCCTTTTGCCCCTCAAACCCCAACAATTGCTAGTTCGAGTTTTGGAACGGCTACCTCAAATTTTGGTTCCTCGCCCTTTGGTGTAACATCTTCTTCCAATCTTTTTGGTTCAGGTTCATCAACTACCACATCCGTTTTTGGATCATCCTCCGCTTTTGGAACAACGACACCATCACCGTTATTTGGTTCATCAAGCACTCCTGGATTTGGCTCTTCTTCATCAATCTTTGGTTCAGCTCCTGGTCAGGGGGCAACTCCAGCATTTGGCAACAGTCAGCCATCTACTCTGTTCAATTCAACCCCTTCGACCGGGCAGACTGGTTCTGCGTTTGGACAGACTGGTTCTGCTTTTGGACAGTTCGGACAGAGTAGTGCTCCTGCATTTGGCCAAAATAGCATTTTTAATAAACCTTCCACTGGATTTGGAAACATGTTTTCCAGTTCTTCAACATTAACCACGTCTAGCAGCTCTCCCTTTGGACAAACAATGCCTGCTGGTGTGACACCCTTTCAATCAGCTCAGCCAGGTCAAGCATCAAATGGTTTTGGTTTCAACAACTTCGGTCAAAATCAAGCAGCTAATACTACTGGAAATGCTGGTGGACTGGGGATTTTTGGTCAAGGCAACTTCGGGCAATCGCCTGCTCCGCTGAACTCTGTTGTTTTGCAACCAGTTGCTGTGACAAACCCATTTGGAACACTTCCTGCTATGCCTCAGATTTCAATAAATCAAGGTGGAAATTCACCTTCCATTCAATATGGAATCTCCAGCATGCCTGTTGTTGACAAACCTGCTCCTGTTAGAATATCATCTCTCCTGACTTCTCGACACCTATTACACAGGCGGGTCAGGCTGCCGGCAAGAAAGTACCGTCCTGGCGAGAATGGTCCAAAGGTTCCATTTTTCACTGATGACGAAGAGAGCTCAAGTACACCAAAGGCGGATGCTCTTTTCATTCCAAGGGAGAACCCTAGAGCTCTAGTTATACGCCCAGTTCAACAGTGGTCTTCAAGGGATAAATCAATACTTCCAAAGGAACAACGCCCGACTGCTCCATTACATGACAATGGGAAGAGTCCCGACATGGCCACTGATGCAGCAAACCATGACAGAAATGGTAACGGAGAACTTGGTGCTACTGGGGAAAGAATTCATACATCAGTCAATGCAAATCAGAAACCGAATGGCACAACACGCTCAGATCAGGCTAGCGAGAAAGAGCGTCCCTACAAAACTCTAAGTGGACACAGAGCAGGAGAAGCCGCAATTGTTTATGAGCACGGTGCAGATATCGAGGCTCTTATGCCGAAGCTACGACAATCTGATTATTTCACAGAGCCACGTATCCAAGAACTAGCAGCTAAGGAAAGAGCGGATCCGGGTTACTGCAGGCGGGTAAGAGACTTTGTAGTGGGACGACACGGTTATGGTAGCATAAAGTTCATGGGAGAGACAGATGTGCGTAGGCTAGACTTGGAATCACTGGTTCAGTTCAATACACGGGAAGTGATTGTATACATGGACGAGAGCAAGAAACCGGCTGTTGGGCAAGGTTTGAATAAACCGGCGGAAGTAACGTTGCTGAACATAAAATGTATTGACAAGAAGACAGGGAAACAGTTTACTGAAGGAGAGAGAGTGGAGAAGTATAAGATGATGCTTAAGAAGAAAGCTGAGGCACAAGGAGCTGAGTTTGTGTCATTTGATCCAGTGAAAGGCGAATGGAAGTTTCGGGTCGAGCATTTTAGTTCGTATAAGCTGGGCGACGAAGATGAAGAAGATGGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1041

Amino Acids

106.31

Weight (kDa)

8.85

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoporin2 PF04096 886 - 1032 2.1e-44 Nup98-96 autopeptidase S59
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 607
Acc16I TGCGCA 1 cut(s) 966
Acc36I ACCTGC 3 cut(s) 406, 607, 2134
Acc65I GGTACC 1 cut(s) 38
AccB1I GGYRCC 7 cut(s) 38, 440, 488, 536, 560, 584, 641
AccB7I CCANNNNNTGG 5 cut(s) 236, 260, 629, 899, 1598
AccBSI CCGCTC 1 cut(s) 2708
AccI GTMKAC 3 cut(s) 428, 908, 2850
AccII CGCG 1 cut(s) 611
AciI CCGC 8 cut(s) 1485, 1982, 2179, 2276, 2598, 2708, 2728, 2903
AclI AACGTT 1 cut(s) 2912
AclWI GGATC 6 cut(s) 322, 841, 1483, 2705, 2718, 3035
AcoI YGGCCR 4 cut(s) 901, 1207, 1720, 2421
AcsI RAATTY 4 cut(s) 265, 1393, 2074, 2484
AcuI CTGAAG 1 cut(s) 2982
AcyI GRCGYC 2 cut(s) 489, 585
AfaI GTAC 7 cut(s) 40, 769, 793, 817, 841, 2204, 2266
AflII CTTAAG 1 cut(s) 2996
AflIII ACRYGT 1 cut(s) 1764
AgeI ACCGGT 1 cut(s) 182
AjiI CACGTC 2 cut(s) 129, 1794
AjnI CCWGG 5 cut(s) 1216, 1534, 1573, 1858, 2209
AjuI GAANNNNNNNTTGG 4 cut(s) 463, 495, 1246, 1278
Alw21I GWGCWC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
Alw26I GTCTC 5 cut(s) 60, 894, 1218, 2730, 2780
Alw44I GTGCAC 1 cut(s) 195
AlwI GGATC 6 cut(s) 322, 841, 1483, 2705, 2718, 3035
AlwNI CAGNNNCTG 2 cut(s) 1574, 2012
AoxI GGCC 5 cut(s) 276, 901, 1207, 1720, 2421
ApaLI GTGCAC 1 cut(s) 195
ApeKI GCWGC 8 cut(s) 143, 385, 927, 1800, 1910, 2188, 2432, 2693
ApoI RAATTY 4 cut(s) 265, 1393, 2074, 2484
AsiGI ACCGGT 1 cut(s) 182
Asp700I GAANNNNTTC 2 cut(s) 175, 2484
Asp718I GGTACC 1 cut(s) 38
AspLEI GCGC 6 cut(s) 467, 491, 587, 611, 932, 967
AspS9I GGNCC 3 cut(s) 1080, 1193, 2222
AsuC2I CCSGG 2 cut(s) 1645, 2715
AsuHPI GGTGA 7 cut(s) 243, 294, 606, 1233, 1263, 1500, 2070
AsuNHI GCTAGC 1 cut(s) 2543
AvaII GGWCC 3 cut(s) 1080, 1193, 2222
BaeGI GKGCMC 1 cut(s) 199
BalI TGGCCA 4 cut(s) 903, 1209, 1722, 2423
BamHI GGATCC 1 cut(s) 2710
BanI GGYRCC 7 cut(s) 38, 440, 488, 536, 560, 584, 641
BanII GRGCYC 3 cut(s) 1322, 2261, 2314
BarI GAAGNNNNNNTAC 2 cut(s) 1228, 1260
BbsI GAAGAC 2 cut(s) 2334, 2948
Bbv12I GWGCWC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
BbvCI CCTCAGC 2 cut(s) 1157, 3009
BbvI GCAGC 8 cut(s) 130, 397, 939, 1812, 1922, 2175, 2444, 2705
BccI CCATC 5 cut(s) 955, 1276, 1513, 1621, 3110
BceAI ACGGC 1 cut(s) 1398
BciT130I CCWGG 5 cut(s) 1218, 1536, 1575, 1860, 2211
BciVI GTATCC 1 cut(s) 2690
BcnI CCSGG 2 cut(s) 1645, 2715
BcoDI GTCTC 5 cut(s) 60, 894, 1218, 2730, 2780
BfaI CTAG 8 cut(s) 837, 1365, 1797, 2307, 2315, 2544, 2690, 2804
BfmI CTRYAG 1 cut(s) 2722
BfoI RGCGCY 4 cut(s) 468, 492, 588, 933
BfrI CTTAAG 1 cut(s) 2996
BfuAI ACCTGC 3 cut(s) 406, 607, 2134
BfuI GTATCC 1 cut(s) 2690
BglI GCCNNNNNGGC 2 cut(s) 782, 806
BisI GCNGC 9 cut(s) 144, 386, 928, 1801, 1911, 2189, 2433, 2598, 2694
BlpI GCTNAGC 1 cut(s) 1854
BlsI GCNGC 9 cut(s) 145, 387, 929, 1802, 1912, 2190, 2434, 2599, 2695
BmcAI AGTACT 4 cut(s) 769, 793, 817, 841
Bme1390I CCNGG 7 cut(s) 1218, 1536, 1575, 1645, 1860, 2211, 2715
Bme18I GGWCC 3 cut(s) 1080, 1193, 2222
BmgBI CACGTC 2 cut(s) 129, 1794
BmgT120I GGNCC 3 cut(s) 1080, 1193, 2222
BmrFI CCNGG 7 cut(s) 1218, 1536, 1575, 1645, 1860, 2211, 2715
BmrI ACTGGG 3 cut(s) 1949, 2321, 2484
BmtI GCTAGC 1 cut(s) 2547
BmuI ACTGGG 3 cut(s) 1949, 2321, 2484
BpiI GAAGAC 2 cut(s) 2334, 2948
BplI GAGNNNNNCTC 2 cut(s) 1693, 1725
BpmI CTGGAG 7 cut(s) 93, 276, 606, 693, 876, 1575, 2086
Bpu10I CCTNAGC 3 cut(s) 1157, 2697, 3009
Bpu1102I GCTNAGC 1 cut(s) 1854
BpuEI CTTGAG 1 cut(s) 2245
BpuMI CCSGG 2 cut(s) 1645, 2715
BsaAI YACGTR 1 cut(s) 2678
BsaHI GRCGYC 2 cut(s) 489, 585
BsaI GGTCTC 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 2294
BsaWI WCCGGW 1 cut(s) 182
Bse118I RCCGGY 6 cut(s) 182, 1082, 1273, 2191, 2872, 2899
Bse3DI GCAATG 1 cut(s) 1228
BseBI CCWGG 5 cut(s) 1218, 1536, 1575, 1860, 2211
BseDI CCNNGG 1 cut(s) 2294
BseGI GGATG 7 cut(s) 206, 785, 809, 869, 1463, 1478, 2284
BseMI GCAATG 1 cut(s) 1228
BseMII CTCAG 8 cut(s) 371, 1103, 1148, 1868, 2063, 2547, 3000, 3015
BseRI GAGGAG 2 cut(s) 1166, 1194
BseSI GKGCMC 1 cut(s) 199
BseXI GCAGC 8 cut(s) 130, 397, 939, 1812, 1922, 2175, 2444, 2705
BseYI CCCAGC 1 cut(s) 3094
BsgI GTGCAG 2 cut(s) 129, 2640
Bsh1236I CGCG 1 cut(s) 611
Bsh1285I CGRYCG 1 cut(s) 1644
BshFI GGCC 5 cut(s) 278, 903, 1209, 1722, 2423
BshNI GGYRCC 7 cut(s) 38, 440, 488, 536, 560, 584, 641
BshTI ACCGGT 1 cut(s) 182
BsiEI CGRYCG 1 cut(s) 1644
BsiHKAI GWGCWC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
BslFI GGGAC 4 cut(s) 1093, 2397, 2544, 2763
BsmAI GTCTC 5 cut(s) 60, 894, 1218, 2730, 2780
BsmBI CGTCTC 1 cut(s) 894
BsmFI GGGAC 4 cut(s) 1093, 2397, 2544, 2763
BsnI GGCC 5 cut(s) 278, 903, 1209, 1722, 2423
Bso31I GGTCTC 1 cut(s) 60
Bsp1286I GDGCHC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
Bsp143I GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
Bsp1720I GCTNAGC 1 cut(s) 1854
BspACI CCGC 8 cut(s) 1485, 1982, 2179, 2276, 2598, 2708, 2728, 2903
BspANI GGCC 5 cut(s) 278, 903, 1209, 1722, 2423
BspCNI CTCAG 8 cut(s) 370, 1102, 1149, 1867, 2062, 2546, 3001, 3016
BspFNI CGCG 1 cut(s) 611
BspMAI CTGCAG 1 cut(s) 2726
BspMI ACCTGC 3 cut(s) 406, 607, 2134
BspOI GCTAGC 1 cut(s) 2547
BspPI GGATC 6 cut(s) 322, 841, 1483, 2705, 2718, 3035
BspQI GCTCTTC 1 cut(s) 1552
BspT107I GGYRCC 7 cut(s) 38, 440, 488, 536, 560, 584, 641
BspTI CTTAAG 1 cut(s) 2996
BspTNI GGTCTC 1 cut(s) 60
BsrBI CCGCTC 1 cut(s) 2708
BsrDI GCAATG 1 cut(s) 1228
BsrFI RCCGGY 6 cut(s) 182, 1082, 1273, 2191, 2872, 2899
BssAI RCCGGY 6 cut(s) 182, 1082, 1273, 2191, 2872, 2899
BssECI CCNNGG 1 cut(s) 2294
BssMI GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
BssNAI GTATAC 1 cut(s) 2851
BssNI GRCGYC 2 cut(s) 489, 585
BssT1I CCWWGG 1 cut(s) 2294
Bst1107I GTATAC 1 cut(s) 2851
Bst2UI CCWGG 5 cut(s) 1218, 1536, 1575, 1860, 2211
Bst6I CTCTTC 3 cut(s) 1552, 2247, 2402
BstACI GRCGYC 2 cut(s) 489, 585
BstAFI CTTAAG 1 cut(s) 2996
BstBAI YACGTR 1 cut(s) 2678
BstF5I GGATG 7 cut(s) 206, 785, 809, 869, 1463, 1478, 2284
BstFNI CGCG 1 cut(s) 611
BstH2I RGCGCY 4 cut(s) 468, 492, 588, 933
BstHHI GCGC 6 cut(s) 467, 491, 587, 611, 932, 967
BstKTI GATC 6 cut(s) 317, 836, 1478, 2539, 2713, 3043
BstMAI GTCTC 5 cut(s) 60, 894, 1218, 2730, 2780
BstMBI GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
BstMCI CGRYCG 1 cut(s) 1644
BstNI CCWGG 5 cut(s) 1218, 1536, 1575, 1860, 2211
BstNSI RCATGY 2 cut(s) 1768, 2110
BstSCI CCNGG 7 cut(s) 1216, 1534, 1573, 1643, 1858, 2209, 2713
BstSFI CTRYAG 1 cut(s) 2722
BstSLI GKGCMC 1 cut(s) 199
BstUI CGCG 1 cut(s) 611
BstV1I GCAGC 8 cut(s) 130, 397, 939, 1812, 1922, 2175, 2444, 2705
BstV2I GAAGAC 2 cut(s) 2334, 2948
BstX2I RGATCY 3 cut(s) 314, 833, 2710
BstXI CCANNNNNNTGG 1 cut(s) 1217
BstYI RGATCY 3 cut(s) 314, 833, 2710
BstZ17I GTATAC 1 cut(s) 2851
BsuI GTATCC 1 cut(s) 2690
BsuRI GGCC 5 cut(s) 278, 903, 1209, 1722, 2423
BtrI CACGTC 2 cut(s) 129, 1794
BtsCI GGATG 7 cut(s) 206, 785, 809, 869, 1463, 1478, 2284
BtsIMutI CAGTG 8 cut(s) 636, 657, 1749, 2241, 2342, 2424, 2816, 3051
BveI ACCTGC 3 cut(s) 406, 607, 2134
CaiI CAGNNNCTG 2 cut(s) 1574, 2012
CfoI GCGC 6 cut(s) 467, 491, 587, 611, 932, 967
Cfr10I RCCGGY 6 cut(s) 182, 1082, 1273, 2191, 2872, 2899
Cfr13I GGNCC 3 cut(s) 1080, 1193, 2222
CseI GACGC 3 cut(s) 600, 846, 2546
Csp6I GTAC 7 cut(s) 39, 768, 792, 816, 840, 2203, 2265
CspAI ACCGGT 1 cut(s) 182
CspCI CAANNNNNGTGG 2 cut(s) 1738, 1773
CviAII CATG 8 cut(s) 1123, 1765, 2107, 2396, 2419, 2441, 2779, 2854
CviQI GTAC 7 cut(s) 39, 768, 792, 816, 840, 2203, 2265
DinI GGCGCC 2 cut(s) 490, 586
DpnI GATC 6 cut(s) 316, 835, 1477, 2538, 2712, 3042
DpnII GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
EaeI YGGCCR 4 cut(s) 901, 1207, 1720, 2421
Eam1104I CTCTTC 3 cut(s) 1552, 2247, 2402
EarI CTCTTC 3 cut(s) 1552, 2247, 2402
EciI GGCGGA 2 cut(s) 2291, 2918
Ecl136II GAGCTC 3 cut(s) 1320, 2259, 2312
Eco130I CCWWGG 1 cut(s) 2294
Eco24I GRGCYC 3 cut(s) 1322, 2261, 2314
Eco31I GGTCTC 1 cut(s) 60
Eco32I GATATC 1 cut(s) 2626
Eco47I GGWCC 3 cut(s) 1080, 1193, 2222
Eco53kI GAGCTC 3 cut(s) 1320, 2259, 2312
Eco57I CTGAAG 1 cut(s) 2982
EcoICRI GAGCTC 3 cut(s) 1320, 2259, 2312
EcoRI GAATTC 2 cut(s) 265, 2484
EcoRII CCWGG 5 cut(s) 1216, 1534, 1573, 1858, 2209
EcoRV GATATC 1 cut(s) 2626
EcoT14I CCWWGG 1 cut(s) 2294
EcoT38I GRGCYC 3 cut(s) 1322, 2261, 2314
EgeI GGCGCC 2 cut(s) 490, 586
EheI GGCGCC 2 cut(s) 490, 586
ErhI CCWWGG 1 cut(s) 2294
Esp3I CGTCTC 1 cut(s) 894
FaeI CATG 8 cut(s) 1126, 1768, 2110, 2399, 2422, 2444, 2782, 2857
FalI AAGNNNNNCTT 2 cut(s) 463, 495
FaqI GGGAC 4 cut(s) 1093, 2397, 2544, 2763
FatI CATG 8 cut(s) 1122, 1764, 2106, 2395, 2418, 2440, 2778, 2853
FauI CCCGC 2 cut(s) 2172, 2721
FblI GTMKAC 3 cut(s) 428, 908, 2850
Fnu4HI GCNGC 9 cut(s) 144, 386, 928, 1801, 1911, 2189, 2433, 2598, 2694
FokI GGATG 7 cut(s) 193, 772, 796, 856, 1450, 1465, 2291
FriOI GRGCYC 3 cut(s) 1322, 2261, 2314
Fsp4HI GCNGC 9 cut(s) 144, 386, 928, 1801, 1911, 2189, 2433, 2598, 2694
FspBI CTAG 8 cut(s) 837, 1365, 1797, 2307, 2315, 2544, 2690, 2804
FspI TGCGCA 1 cut(s) 966
GlaI GCGC 6 cut(s) 466, 490, 586, 610, 931, 966
GluI GCNGC 9 cut(s) 144, 386, 928, 1801, 1911, 2189, 2433, 2598, 2694
GsaI CCCAGC 1 cut(s) 3098
GsuI CTGGAG 7 cut(s) 93, 276, 606, 693, 876, 1575, 2086
HaeII RGCGCY 4 cut(s) 468, 492, 588, 933
HaeIII GGCC 5 cut(s) 278, 903, 1209, 1722, 2423
HgaI GACGC 3 cut(s) 600, 846, 2546
HhaI GCGC 6 cut(s) 467, 491, 587, 611, 932, 967
Hin1I GRCGYC 2 cut(s) 489, 585
Hin1II CATG 8 cut(s) 1126, 1768, 2110, 2399, 2422, 2444, 2782, 2857
Hin6I GCGC 6 cut(s) 465, 489, 585, 609, 930, 965
HinP1I GCGC 6 cut(s) 465, 489, 585, 609, 930, 965
HincII GTYRAC 2 cut(s) 1025, 2119
HindII GTYRAC 2 cut(s) 1025, 2119
HinfI GANTC 5 cut(s) 619, 1109, 2097, 2410, 2813
HphI GGTGA 7 cut(s) 243, 294, 606, 1233, 1263, 1500, 2070
Hpy188I TCNGA 8 cut(s) 75, 170, 1287, 1697, 2052, 2511, 2536, 2659
Hpy188III TCNNGA 5 cut(s) 153, 672, 2152, 2160, 2414
Hpy99I CGWCG 1 cut(s) 3104
HpyAV CCTTC 9 cut(s) 489, 565, 763, 855, 1254, 1647, 1755, 2091, 2957
HpyCH4IV ACGT 5 cut(s) 128, 647, 1793, 2677, 2912
HpySE526I ACGT 5 cut(s) 128, 647, 1793, 2677, 2912
Hsp92I GRCGYC 2 cut(s) 489, 585
Hsp92II CATG 8 cut(s) 1126, 1768, 2110, 2399, 2422, 2444, 2782, 2857
HspAI GCGC 6 cut(s) 465, 489, 585, 609, 930, 965
KasI GGCGCC 2 cut(s) 488, 584
KpnI GGTACC 1 cut(s) 42
KroI GCCGGC 1 cut(s) 2191
KroNI GCCGGC 1 cut(s) 2193
Kzo9I GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
LguI GCTCTTC 1 cut(s) 1552
Lsp1109I GCAGC 8 cut(s) 130, 397, 939, 1812, 1922, 2175, 2444, 2705
MaeI CTAG 8 cut(s) 837, 1365, 1797, 2307, 2315, 2544, 2690, 2804
MaeII ACGT 5 cut(s) 128, 647, 1793, 2677, 2912
MaeIII GTNAC 8 cut(s) 612, 653, 1417, 1834, 2014, 2453, 2717, 2908
MalI GATC 6 cut(s) 316, 835, 1477, 2538, 2712, 3042
MbiI CCGCTC 1 cut(s) 2708
MboI GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
MfeI CAATTG 2 cut(s) 1359, 2601
MflI RGATCY 3 cut(s) 314, 833, 2710
MhlI GDGCHC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
MlsI TGGCCA 4 cut(s) 903, 1209, 1722, 2423
MluCI AATT 7 cut(s) 265, 1359, 1393, 1627, 2074, 2484, 2601
MluNI TGGCCA 4 cut(s) 903, 1209, 1722, 2423
Mly113I GGCGCC 2 cut(s) 489, 585
MlyI GAGTC 2 cut(s) 613, 2419
MmeI TCCRAC 2 cut(s) 1086, 1325
Mox20I TGGCCA 4 cut(s) 903, 1209, 1722, 2423
MroNI GCCGGC 1 cut(s) 2191
MroXI GAANNNNTTC 2 cut(s) 175, 2484
MscI TGGCCA 4 cut(s) 903, 1209, 1722, 2423
MseI TTAA 3 cut(s) 1737, 1787, 2997
MslI CAYNNNNRTG 2 cut(s) 2400, 2760
Msp20I TGGCCA 4 cut(s) 903, 1209, 1722, 2423
MspA1I CMGCKG 1 cut(s) 1984
MspCI CTTAAG 1 cut(s) 2996
MspR9I CCNGG 7 cut(s) 1218, 1536, 1575, 1645, 1860, 2211, 2715
MunI CAATTG 2 cut(s) 1359, 2601
MvaI CCWGG 5 cut(s) 1218, 1536, 1575, 1860, 2211
MvnI CGCG 1 cut(s) 611
NaeI GCCGGC 1 cut(s) 2193
NarI GGCGCC 2 cut(s) 489, 585
NciI CCSGG 2 cut(s) 1645, 2715
NdeII GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
NgoMIV GCCGGC 1 cut(s) 2191
NheI GCTAGC 1 cut(s) 2543
NlaIII CATG 8 cut(s) 1126, 1768, 2110, 2399, 2422, 2444, 2782, 2857
NmuCI GTSAC 3 cut(s) 612, 1834, 2014
NsbI TGCGCA 1 cut(s) 966
NspI RCATGY 2 cut(s) 1768, 2110
PaeI GCATGC 1 cut(s) 2110
PaqCI CACCTGC 1 cut(s) 607
PciI ACATGT 1 cut(s) 1764
PciSI GCTCTTC 1 cut(s) 1552
PdiI GCCGGC 1 cut(s) 2193
PdmI GAANNNNTTC 2 cut(s) 175, 2484
PfeI GAWTC 3 cut(s) 1109, 2097, 2813
PflMI CCANNNNNTGG 5 cut(s) 236, 260, 629, 899, 1598
PfoI TCCNGGA 1 cut(s) 1534
PinAI ACCGGT 1 cut(s) 182
PkrI GCNGC 9 cut(s) 145, 387, 929, 1802, 1912, 2190, 2434, 2599, 2695
PleI GAGTC 2 cut(s) 613, 2418
PluTI GGCGCC 2 cut(s) 492, 588
PpsI GAGTC 2 cut(s) 613, 2418
Ppu21I YACGTR 1 cut(s) 2678
PscI ACATGT 1 cut(s) 1764
Psp124BI GAGCTC 3 cut(s) 1322, 2261, 2314
Psp1406I AACGTT 1 cut(s) 2912
Psp6I CCWGG 5 cut(s) 1216, 1534, 1573, 1858, 2209
PspFI CCCAGC 1 cut(s) 3094
PspGI CCWGG 5 cut(s) 1216, 1534, 1573, 1858, 2209
PspPI GGNCC 3 cut(s) 1080, 1193, 2222
PstI CTGCAG 1 cut(s) 2726
PstNI CAGNNNCTG 2 cut(s) 1574, 2012
PsuI RGATCY 3 cut(s) 314, 833, 2710
RsaI GTAC 7 cut(s) 40, 769, 793, 817, 841, 2204, 2266
RsaNI GTAC 7 cut(s) 39, 768, 792, 816, 840, 2203, 2265
RseI CAYNNNNRTG 2 cut(s) 2400, 2760
SacI GAGCTC 3 cut(s) 1322, 2261, 2314
SapI GCTCTTC 1 cut(s) 1552
SaqAI TTAA 3 cut(s) 1737, 1787, 2997
SatI GCNGC 9 cut(s) 144, 386, 928, 1801, 1911, 2189, 2433, 2598, 2694
Sau3AI GATC 6 cut(s) 314, 833, 1475, 2536, 2710, 3040
Sau96I GGNCC 3 cut(s) 1080, 1193, 2222
ScaI AGTACT 4 cut(s) 769, 793, 817, 841
SchI GAGTC 2 cut(s) 613, 2419
ScrFI CCNGG 7 cut(s) 1218, 1536, 1575, 1645, 1860, 2211, 2715
SduI GDGCHC 6 cut(s) 199, 1322, 1711, 2261, 2314, 2616
SfcI CTRYAG 1 cut(s) 2722
SfoI GGCGCC 2 cut(s) 490, 586
SgrAI CRCCGGYG 1 cut(s) 1273
SinI GGWCC 3 cut(s) 1080, 1193, 2222
SmiMI CAYNNNNRTG 2 cut(s) 2400, 2760
SmlI CTYRAG 2 cut(s) 2260, 2996
SmoI CTYRAG 2 cut(s) 2260, 2996
SphI GCATGC 1 cut(s) 2110
Sse9I AATT 7 cut(s) 265, 1359, 1393, 1627, 2074, 2484, 2601
SsiI CCGC 8 cut(s) 1485, 1982, 2179, 2276, 2598, 2708, 2728, 2903
SspDI GGCGCC 2 cut(s) 488, 584
SspI AATATT 1 cut(s) 165
SspMI CTAG 8 cut(s) 837, 1365, 1797, 2307, 2315, 2544, 2690, 2804
SstI GAGCTC 3 cut(s) 1322, 2261, 2314
StyD4I CCNGG 7 cut(s) 1216, 1534, 1573, 1643, 1858, 2209, 2713
StyI CCWWGG 1 cut(s) 2294
TaiI ACGT 5 cut(s) 131, 650, 1796, 2680, 2915
TaqI TCGA 7 cut(s) 1039, 1316, 1370, 1640, 2161, 2628, 3072
TaqII GACCGA 1 cut(s) 1886
TasI AATT 7 cut(s) 265, 1359, 1393, 1627, 2074, 2484, 2601
TatI WGTACW 5 cut(s) 767, 791, 815, 839, 2264
TauI GCSGC 1 cut(s) 2600
TfiI GAWTC 3 cut(s) 1109, 2097, 2813
Tru1I TTAA 3 cut(s) 1737, 1787, 2997
Tru9I TTAA 3 cut(s) 1737, 1787, 2997
TscAI CASTG 8 cut(s) 643, 664, 1756, 2248, 2342, 2431, 2823, 3051
TseFI GTSAC 3 cut(s) 612, 1834, 2014
TseI GCWGC 8 cut(s) 143, 385, 927, 1800, 1910, 2188, 2432, 2693
Tsp45I GTSAC 3 cut(s) 612, 1834, 2014
TspDTI ATGAA 8 cut(s) 237, 1440, 1512, 1542, 2278, 2477, 2767, 3123
TspGWI ACGGA 2 cut(s) 1456, 2472
TspRI CASTG 8 cut(s) 643, 664, 1756, 2248, 2342, 2431, 2823, 3051
Van91I CCANNNNNTGG 5 cut(s) 236, 260, 629, 899, 1598
Vha464I CTTAAG 1 cut(s) 2996
VneI GTGCAC 1 cut(s) 195
VpaK11BI GGWCC 3 cut(s) 1080, 1193, 2222
XapI RAATTY 4 cut(s) 265, 1393, 2074, 2484
XceI RCATGY 2 cut(s) 1768, 2110
XcmI CCANNNNNNNNNTGG 3 cut(s) 401, 2334, 2447
XmiI GTMKAC 3 cut(s) 428, 908, 2850
XmnI GAANNNNTTC 2 cut(s) 175, 2484
XspI CTAG 8 cut(s) 837, 1365, 1797, 2307, 2315, 2544, 2690, 2804
ZrmI AGTACT 4 cut(s) 769, 793, 817, 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.