pycom06g11640

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0007827
Physical Location & Seq
Forward (+)
16871827 .. 16889816
17990 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11640.4

Sequence Viewer

Length: 2985 bp
ATGATCGATTCTTCTAATCCTTTTGGGCAGGCATCTAGCAGCCCGTTTGGGTCTCAATCAGTATTTGGGCAGACCAGCATCACAAATAACAATCCTTTTGCCCCTAAGCCTTTTGGTAGCACAACCCCATTTGGTGCGCAAACAGGGAGTAACATGTTTGGAGGAACTTCAACTGGTGCATTTGGCACAACTCAAGCTTCTTCACCTTTTCCTTCCTCCACAACCTTTGGTGCTGCGTCCTCACCAGCTTTTGGAAATACAACGCCTGCTTTTGGAGCAACTTCTAGTCCTTCACCATCACCTTTTGGTGGTTCATCTGGGTTTGGTCAGAAGCCTGTGTTTGGAGCATTTGGGTCCAATCCTACTCAAACAAGTCCTTTTGGATGTACAACACAACCATCACAGCCATCATTTGGGAGCAGTATATTTGGTTCCTCCACGCCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACCCCAGCTTTTGGTGCTACAAGCACCCCAGCGTTTGGTGCTACAAGTAGTCCAGCCTTTGCGTTTGGTGCTACAAGTAGTCCAGCCTTTGGTGCTACAAGTAGTCCAGCCTTTGGTGCTACCACCATCCCAGCATTTGGTGCTACCACCACCCCAGCTATTGGTGCTACAAGCACCCCAGCTTTTGGTGCTACAAGCACCCCAGCTTTTGGAGCTACAAGTAGCCCAGCCTTTGGTTCCACAACAAGTCCTACATTTGGAAGCACAGGAGCTGCATTTGGGGTGTCAAGTTCTCCCTTGTTTGGATCTGGGGGAGCATTTGGGGCTTCAAGCACTCCGGCTTTTGGTTCATCTAGCTCGACCTTTGGTACTTCAAGCAATCCAGCTTTTGGTGCTTCAAGTGCTCCTGGTTTTGGTTCATCCAGTACTCCATCTTTCAGCTTTCCATCAACTCCTGCCTTTGGCCAATCAAGTTCTACATTTGGTAGCAGTCAATTTGCCGCTTCATCTCCTTTTGGAGCACAGAGTTCTCCATTTGGAGCTCAATCAACAACATTTGGGAACACTAGTGCCTTTGGGCAGTCAGCTTTTGGGGGCCAGCAACGCGGAGGCAGTAGAGTAGTTGCATATGCTGCAACTCCTGAACCCGATGGTGGAACTGGGACTAGTGCTGCTGGGAAATTGGAGTCAATATCGGCAATGCCACAATATAAAGAAAAAAGTCATGAGGAACTCCGCTGGGAGGATTATCAATTGGGGGATAAGGGTGGTCCAGCTCCTGCTGGTGGGAGTGGGTTTGGCATTACCACCTCACAGCCAAACCCTTTGAATTCTGCACCGACATTTCCTCAGGCATCAAGTCCTTTTAATGCCACAACTTCCTCTAATTTGTTTGCTCCAAAAACTTCATCCTTCACTAATACAGGCTTCACAACAACGTCTACACCATTCAGCTCATCAAGTTTTGGGATTTCTACTTCAACCAGTCCTTTTGCACCATCACAACCTTCTACAGTTTTCCCTCAAACCTCATCTCCGTCTCTCTTTAGTTCGTCAAGCTCTGCATTTTCATTTTCTGCTCCAGCTGCGACAACAACTTCCACATTTAATTCAAATCCATTCAATCCCACACCTCCAGCTGCCCAGACAGGTGGTGCTTTTACCAGTCCATTTGGGCAGAATACAACCCCGTTTGCTCAGCCATTTAGTAACCCTTCTACTGGCTTTGGTTTGGGGATCCCCTCTGCTGCTGGGGCTACAAGCAGTCAAATGGGTTTTAGTCAACCAACTCCAACTTCTTTTTCTATGCCTTTCTCATCTCAGCCAACTCAGAATAGTGGTTTTAACTTCAACAGTTTTAATCAAACTCAGCCAGGCAACACAAGTGGCTTGGGAGGAGGTTCAACAGGAATTCTTGGTCAGAATAACTATGGACAGTTGCCTGCAACGCAAAGCTCTGCAGCTGTACAACCAGTCCCTGCTACAAATCCATTTGGAACGCTCCCTGCAATGCCACAAATGTCAATTGGTCGTGGTGGAACTGCACCATCAATTCAATACGGAATTTCGAGCATGCCTGTCGTAGACAAACCTGCACCTGTTAAAGTATCATATTTGTTGACCTCTCAACACCTGTCGCAGAGGCGGGTCAGGTTACCTGCGAGAAAATATAATCCTAAGAATGACGATCCAAGGTTCCCTTTCTTTATTGACGATGAAGAAATAGACAGCACACCCAAGGCGGATGCTCTTTTCCTTCCCAGAGAAAACCCAAGAGCACTCGTCATTCGTCCAAAAGAACAGTGGCCTCAAAGGGTTGGTGCTGAGAAAGCATCCCCATTAAAGGATATTTCTACTCCGGTTCATGAGAATGGAAAAATTCCGGGAGAAGCTCGTTCTGAGGAGAAAGATAAAACTCGAGAAGAAAATGGCTTTGTGAAAGAGCGGGCGGATCATGCCAAAGTCAACCAGAAACTGAATGGAGTTCATGATGATCATTCTGTTCAGAAAGGGGACTCTTATATGACACTAAGTGGGCATAGAGCCGGTGAGGCTGCTATTGCATATGAGCATGGCGCTGACATTGAGGCACTAATGCCAAAGCTCCGTCGTACTGACTACTATACAGAGCCTCGAATCCAAGAATTGGCAGCTAAGGAAAGGGCAGAACAAGGGTTCTGCTGTTGTGTCAAGGATTTTGTGGTTGGACGAGTTGGGTGTGGTAGCATCAAGTTAATTGGGGAGACAGATGTGCGATGCCTTGATCTTGAGGCTCTCGTGCAGTTCAACAACCGGGAGGTGATAGTTTATATGGATGACAGTAAGAAACCTCCTGTCGGGCAAGGCCTCAACAAACCTGCTGAGGTTACACTACTCAACATTACATGCACTGACAAAAAAACAGGGCATCGGTTCACAGAAGGGCCGAAGACAGAGAGATACAAGCAGATGCTGAAGAAGAAGGCAGAGGATCGATCAAGGAGCCGAGTTTGTTTCTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

995

Amino Acids

102.1

Weight (kDa)

8.8

Isoelectric Point (pI)

58.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 138
Acc36I ACCTGC 3 cut(s) 2083, 2149, 2848
AccBSI CCGCTC 1 cut(s) 2428
AccI GTMKAC 2 cut(s) 1424, 2067
AccII CGCG 1 cut(s) 1089
AciI CCGC 7 cut(s) 984, 1089, 1219, 2128, 2225, 2428, 2432
AclWI GGATC 7 cut(s) 460, 796, 1714, 1727, 2165, 2442, 2961
AcoI YGGCCR 1 cut(s) 946
AcsI RAATTY 4 cut(s) 1312, 1893, 2046, 2361
AcuI CTGAAG 1 cut(s) 2957
AdeI CACNNNGTG 1 cut(s) 2516
AfaI GTAC 5 cut(s) 388, 853, 910, 1950, 2596
AflIII ACRYGT 1 cut(s) 153
AhlI ACTAGT 2 cut(s) 1049, 1148
AjnI CCWGG 2 cut(s) 889, 1855
AjuI GAANNNNNNNTTGG 4 cut(s) 1762, 1768, 1794, 1800
Alw21I GWGCWC 4 cut(s) 889, 1006, 1027, 2263
Alw26I GTCTC 3 cut(s) 57, 1527, 2720
AlwI GGATC 7 cut(s) 460, 796, 1714, 1727, 2165, 2442, 2961
AlwNI CAGNNNCTG 5 cut(s) 755, 1262, 1961, 2458, 2935
Ama87I CYCGRG 1 cut(s) 2400
AoxI GGCC 5 cut(s) 946, 1078, 2288, 2827, 2906
ApoI RAATTY 4 cut(s) 1312, 1893, 2046, 2361
AspLEI GCGC 2 cut(s) 139, 2561
AspS9I GGNCC 4 cut(s) 354, 1078, 1253, 2906
AsuC2I CCSGG 2 cut(s) 2367, 2777
AsuHPI GGTGA 6 cut(s) 195, 234, 285, 291, 2543, 2794
AvaI CYCGRG 1 cut(s) 2400
AvaII GGWCC 2 cut(s) 354, 1253
AxyI CCTNAGG 1 cut(s) 1332
BalI TGGCCA 1 cut(s) 948
BamHI GGATCC 1 cut(s) 1719
BanII GRGCYC 1 cut(s) 1027
BauI CACGAG 1 cut(s) 2759
BbsI GAAGAC 1 cut(s) 2918
Bbv12I GWGCWC 4 cut(s) 889, 1006, 1027, 2263
BbvCI CCTCAGC 1 cut(s) 2844
BccI CCATC 9 cut(s) 304, 406, 415, 617, 922, 937, 1127, 1489, 2038
BcgI CGANNNNNNTGC 2 cut(s) 2044, 2078
BciT130I CCWGG 2 cut(s) 891, 1857
BclI TGATCA 1 cut(s) 2476
BcnI CCSGG 2 cut(s) 2367, 2777
BcoDI GTCTC 3 cut(s) 57, 1527, 2720
BcuI ACTAGT 2 cut(s) 1049, 1148
BfaI CTAG 5 cut(s) 36, 285, 837, 1050, 1149
BfmI CTRYAG 2 cut(s) 1494, 1941
BfoI RGCGCY 1 cut(s) 2562
BfuAI ACCTGC 3 cut(s) 2083, 2149, 2848
BglI GCCNNNNNGGC 1 cut(s) 2534
BlpI GCTNAGC 1 cut(s) 1680
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 4 cut(s) 891, 1857, 2367, 2777
Bme18I GGWCC 2 cut(s) 354, 1253
BmeT110I CYCGRG 1 cut(s) 2400
BmgT120I GGNCC 4 cut(s) 354, 1078, 1253, 2906
BmiI GGNNCC 7 cut(s) 355, 433, 721, 1079, 1721, 2180, 2966
BmrFI CCNGG 4 cut(s) 891, 1857, 2367, 2777
BmrI ACTGGG 1 cut(s) 1152
BmsI GCATC 9 cut(s) 41, 87, 1346, 2218, 2324, 2718, 2729, 2899, 2922
BmuI ACTGGG 1 cut(s) 1152
BpiI GAAGAC 1 cut(s) 2918
BpmI CTGGAG 2 cut(s) 1548, 1602
Bpu10I CCTNAGC 3 cut(s) 105, 2637, 2844
Bpu1102I GCTNAGC 1 cut(s) 1680
BpuEI CTTGAG 2 cut(s) 177, 2771
BpuMI CCSGG 2 cut(s) 2367, 2777
Bsa29I ATCGAT 2 cut(s) 6, 2956
BsaI GGTCTC 1 cut(s) 57
BsaJI CCNNGG 2 cut(s) 2174, 2220
BsaWI WCCGGW 1 cut(s) 2341
BsaXI ACNNNNNCTCC 2 cut(s) 1501, 1531
Bse118I RCCGGY 1 cut(s) 2528
Bse1I ACTGG 7 cut(s) 178, 906, 1147, 1467, 1647, 1708, 1955
Bse21I CCTNAGG 1 cut(s) 1332
Bse3DI GCAATG 2 cut(s) 1188, 1998
BseBI CCWGG 2 cut(s) 891, 1857
BseCI ATCGAT 2 cut(s) 6, 2956
BseDI CCNNGG 2 cut(s) 2174, 2220
BseGI GGATG 7 cut(s) 389, 609, 902, 1391, 2233, 2315, 2803
BseMI GCAATG 2 cut(s) 1188, 1998
BseMII CTCAG 8 cut(s) 1346, 1694, 1817, 1826, 1865, 2298, 2373, 2835
BseNI ACTGG 7 cut(s) 178, 906, 1147, 1467, 1647, 1708, 1955
BseRI GAGGAG 2 cut(s) 1893, 2399
BsgI GTGCAG 4 cut(s) 1302, 2010, 2061, 2783
Bsh1236I CGCG 1 cut(s) 1089
BshFI GGCC 5 cut(s) 948, 1080, 2290, 2829, 2908
BshVI ATCGAT 2 cut(s) 6, 2956
BsiHKAI GWGCWC 4 cut(s) 889, 1006, 1027, 2263
BsiHKCI CYCGRG 1 cut(s) 2400
BsiSI CCGG 5 cut(s) 821, 2342, 2366, 2529, 2776
BslFI GGGAC 3 cut(s) 1159, 1943, 2510
BsmAI GTCTC 3 cut(s) 57, 1527, 2720
BsmBI CGTCTC 1 cut(s) 1527
BsmFI GGGAC 3 cut(s) 1159, 1943, 2510
BsnI GGCC 5 cut(s) 948, 1080, 2290, 2829, 2908
Bso31I GGTCTC 1 cut(s) 57
BsoBI CYCGRG 1 cut(s) 2400
Bsp1286I GDGCHC 4 cut(s) 889, 1006, 1027, 2263
Bsp1407I TGTACA 2 cut(s) 386, 1948
Bsp1720I GCTNAGC 1 cut(s) 1680
BspACI CCGC 7 cut(s) 984, 1089, 1219, 2128, 2225, 2428, 2432
BspANI GGCC 5 cut(s) 948, 1080, 2290, 2829, 2908
BspCNI CTCAG 8 cut(s) 1345, 1693, 1816, 1825, 1864, 2299, 2374, 2836
BspDI ATCGAT 2 cut(s) 6, 2956
BspFNI CGCG 1 cut(s) 1089
BspHI TCATGA 3 cut(s) 1207, 2347, 2470
BspLI GGNNCC 7 cut(s) 355, 433, 721, 1079, 1721, 2180, 2966
BspMAI CTGCAG 1 cut(s) 1945
BspMI ACCTGC 3 cut(s) 2083, 2149, 2848
BspPI GGATC 7 cut(s) 460, 796, 1714, 1727, 2165, 2442, 2961
BspTNI GGTCTC 1 cut(s) 57
BsrBI CCGCTC 1 cut(s) 2428
BsrDI GCAATG 2 cut(s) 1188, 1998
BsrFI RCCGGY 1 cut(s) 2528
BsrGI TGTACA 2 cut(s) 386, 1948
BsrI ACTGG 7 cut(s) 178, 906, 1147, 1467, 1647, 1708, 1955
BssAI RCCGGY 1 cut(s) 2528
BssECI CCNNGG 2 cut(s) 2174, 2220
BssSI CACGAG 1 cut(s) 2759
BssT1I CCWWGG 2 cut(s) 2174, 2220
Bst2BI CACGAG 1 cut(s) 2759
Bst2UI CCWGG 2 cut(s) 891, 1857
Bst4CI ACNGT 5 cut(s) 1498, 1838, 1920, 2286, 2804
BstAPI GCANNNNNTGC 3 cut(s) 473, 623, 1115
BstAUI TGTACA 2 cut(s) 386, 1948
BstC8I GCNNGC 7 cut(s) 30, 267, 465, 1082, 1926, 2057, 2430
BstEII GGTNACC 1 cut(s) 2136
BstF5I GGATG 7 cut(s) 389, 609, 902, 1391, 2233, 2315, 2803
BstFNI CGCG 1 cut(s) 1089
BstH2I RGCGCY 1 cut(s) 2562
BstHHI GCGC 2 cut(s) 139, 2561
BstMAI GTCTC 3 cut(s) 57, 1527, 2720
BstNI CCWGG 2 cut(s) 891, 1857
BstNSI RCATGY 3 cut(s) 157, 2059, 2871
BstPI GGTNACC 1 cut(s) 2136
BstSCI CCNGG 4 cut(s) 889, 1855, 2365, 2775
BstSFI CTRYAG 2 cut(s) 1494, 1941
BstUI CGCG 1 cut(s) 1089
BstV2I GAAGAC 1 cut(s) 2918
BstX2I RGATCY 2 cut(s) 788, 1719
BstXI CCANNNNNNTGG 1 cut(s) 1634
BstYI RGATCY 2 cut(s) 788, 1719
Bsu15I ATCGAT 2 cut(s) 6, 2956
Bsu36I CCTNAGG 1 cut(s) 1332
BsuRI GGCC 5 cut(s) 948, 1080, 2290, 2829, 2908
BsuTUI ATCGAT 2 cut(s) 6, 2956
BtgZI GCGATG 1 cut(s) 2752
BtsCI GGATG 7 cut(s) 389, 609, 902, 1391, 2233, 2315, 2803
BtsIMutI CAGTG 2 cut(s) 2291, 2871
BveI ACCTGC 3 cut(s) 2083, 2149, 2848
Cac8I GCNNGC 7 cut(s) 30, 267, 465, 1082, 1926, 2057, 2430
CaiI CAGNNNCTG 5 cut(s) 755, 1262, 1961, 2458, 2935
CciI TCATGA 3 cut(s) 1207, 2347, 2470
CfoI GCGC 2 cut(s) 139, 2561
Cfr10I RCCGGY 1 cut(s) 2528
Cfr13I GGNCC 4 cut(s) 354, 1078, 1253, 2906
ClaI ATCGAT 2 cut(s) 6, 2956
CseI GACGC 1 cut(s) 225
Csp6I GTAC 5 cut(s) 387, 852, 909, 1949, 2595
CspCI CAANNNNNGTGG 6 cut(s) 208, 243, 427, 462, 1849, 1884
CviAII CATG 8 cut(s) 154, 1208, 2056, 2348, 2438, 2471, 2555, 2868
CviQI GTAC 5 cut(s) 387, 852, 909, 1949, 2595
DraIII CACNNNGTG 1 cut(s) 2516
EaeI YGGCCR 1 cut(s) 946
EciI GGCGGA 2 cut(s) 2240, 2447
Ecl136II GAGCTC 1 cut(s) 1025
Eco130I CCWWGG 2 cut(s) 2174, 2220
Eco147I AGGCCT 1 cut(s) 2829
Eco24I GRGCYC 1 cut(s) 1027
Eco31I GGTCTC 1 cut(s) 57
Eco47I GGWCC 2 cut(s) 354, 1253
Eco53kI GAGCTC 1 cut(s) 1025
Eco57I CTGAAG 1 cut(s) 2957
Eco81I CCTNAGG 1 cut(s) 1332
Eco88I CYCGRG 1 cut(s) 2400
Eco91I GGTNACC 1 cut(s) 2136
EcoICRI GAGCTC 1 cut(s) 1025
EcoO65I GGTNACC 1 cut(s) 2136
EcoRI GAATTC 2 cut(s) 1312, 1893
EcoRII CCWGG 2 cut(s) 889, 1855
EcoT14I CCWWGG 2 cut(s) 2174, 2220
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 2 cut(s) 2174, 2220
Esp3I CGTCTC 1 cut(s) 1527
FaeI CATG 8 cut(s) 157, 1211, 2059, 2351, 2441, 2474, 2558, 2871
FalI AAGNNNNNCTT 2 cut(s) 2167, 2199
FaqI GGGAC 3 cut(s) 1159, 1943, 2510
FatI CATG 8 cut(s) 153, 1207, 2055, 2347, 2437, 2470, 2554, 2867
FauI CCCGC 2 cut(s) 2121, 2421
FauNDI CATATG 2 cut(s) 1111, 2548
FbaI TGATCA 1 cut(s) 2476
FblI GTMKAC 2 cut(s) 1424, 2067
FokI GGATG 7 cut(s) 396, 596, 889, 1378, 2240, 2302, 2810
FriOI GRGCYC 1 cut(s) 1027
FspBI CTAG 5 cut(s) 36, 285, 837, 1050, 1149
FspI TGCGCA 1 cut(s) 138
GlaI GCGC 2 cut(s) 138, 2560
GsuI CTGGAG 2 cut(s) 1548, 1602
HaeII RGCGCY 1 cut(s) 2562
HaeIII GGCC 5 cut(s) 948, 1080, 2290, 2829, 2908
HapII CCGG 5 cut(s) 821, 2342, 2366, 2529, 2776
HgaI GACGC 1 cut(s) 225
HhaI GCGC 2 cut(s) 139, 2561
Hin1II CATG 8 cut(s) 157, 1211, 2059, 2351, 2441, 2474, 2558, 2871
Hin6I GCGC 2 cut(s) 137, 2559
HinP1I GCGC 2 cut(s) 137, 2559
HincII GTYRAC 3 cut(s) 1766, 2103, 2449
HindII GTYRAC 3 cut(s) 1766, 2103, 2449
HindIII AAGCTT 1 cut(s) 195
HinfI GANTC 4 cut(s) 8, 1169, 2498, 2619
HpaII CCGG 5 cut(s) 821, 2342, 2366, 2529, 2776
HphI GGTGA 6 cut(s) 195, 234, 285, 291, 2543, 2794
Hpy166II GTNNAC 6 cut(s) 1425, 1766, 2068, 2103, 2449, 2898
Hpy188I TCNGA 5 cut(s) 330, 1815, 1905, 2383, 2490
Hpy188III TCNNGA 6 cut(s) 1124, 1208, 2348, 2402, 2471, 2750
Hpy8I GTNNAC 6 cut(s) 1425, 1766, 2068, 2103, 2449, 2898
Hpy99I CGWCG 1 cut(s) 2595
HpyAV CCTTC 8 cut(s) 222, 300, 1405, 1500, 1707, 2249, 2897, 2938
HpyCH4III ACNGT 5 cut(s) 1498, 1838, 1920, 2286, 2804
HpyCH4IV ACGT 1 cut(s) 1421
HpySE526I ACGT 1 cut(s) 1421
Hsp92II CATG 8 cut(s) 157, 1211, 2059, 2351, 2441, 2474, 2558, 2871
HspAI GCGC 2 cut(s) 137, 2559
Ksp22I TGATCA 1 cut(s) 2476
LweI GCATC 9 cut(s) 41, 87, 1346, 2218, 2324, 2718, 2729, 2899, 2922
MaeI CTAG 5 cut(s) 36, 285, 837, 1050, 1149
MaeII ACGT 1 cut(s) 1421
MaeIII GTNAC 4 cut(s) 149, 1691, 2136, 2848
MbiI CCGCTC 1 cut(s) 2428
MboII GAAGA 7 cut(s) 3, 192, 2213, 2417, 2923, 2950, 2953
MfeI CAATTG 2 cut(s) 1235, 2007
MflI RGATCY 2 cut(s) 788, 1719
MhlI GDGCHC 4 cut(s) 889, 1006, 1027, 2263
MlsI TGGCCA 1 cut(s) 948
MluNI TGGCCA 1 cut(s) 948
MlyI GAGTC 2 cut(s) 1178, 2492
MmeI TCCRAC 2 cut(s) 1799, 2668
Mox20I TGGCCA 1 cut(s) 948
MscI TGGCCA 1 cut(s) 948
MseI TTAA 7 cut(s) 1350, 1590, 1827, 1842, 2085, 2324, 2717
MslI CAYNNNNRTG 1 cut(s) 2352
Msp20I TGGCCA 1 cut(s) 948
MspA1I CMGCKG 4 cut(s) 1221, 1568, 1622, 1946
MspI CCGG 5 cut(s) 821, 2342, 2366, 2529, 2776
MspR9I CCNGG 4 cut(s) 891, 1857, 2367, 2777
MunI CAATTG 2 cut(s) 1235, 2007
MvaI CCWGG 2 cut(s) 891, 1857
MvnI CGCG 1 cut(s) 1089
NciI CCSGG 2 cut(s) 2367, 2777
NdeI CATATG 2 cut(s) 1111, 2548
NlaIII CATG 8 cut(s) 157, 1211, 2059, 2351, 2441, 2474, 2558, 2871
NlaIV GGNNCC 7 cut(s) 355, 433, 721, 1079, 1721, 2180, 2966
NsbI TGCGCA 1 cut(s) 138
NspI RCATGY 3 cut(s) 157, 2059, 2871
PaeI GCATGC 1 cut(s) 2059
PaeR7I CTCGAG 1 cut(s) 2400
PagI TCATGA 3 cut(s) 1207, 2347, 2470
PceI AGGCCT 1 cut(s) 2829
PciI ACATGT 1 cut(s) 153
PfeI GAWTC 2 cut(s) 8, 2619
PfoI TCCNGGA 1 cut(s) 2365
PleI GAGTC 2 cut(s) 1177, 2492
PpsI GAGTC 2 cut(s) 1177, 2492
PscI ACATGT 1 cut(s) 153
Psp124BI GAGCTC 1 cut(s) 1027
Psp6I CCWGG 2 cut(s) 889, 1855
PspEI GGTNACC 1 cut(s) 2136
PspGI CCWGG 2 cut(s) 889, 1855
PspN4I GGNNCC 7 cut(s) 355, 433, 721, 1079, 1721, 2180, 2966
PspPI GGNCC 4 cut(s) 354, 1078, 1253, 2906
PsrI GAACNNNNNNTAC 2 cut(s) 415, 447
PstI CTGCAG 1 cut(s) 1945
PstNI CAGNNNCTG 5 cut(s) 755, 1262, 1961, 2458, 2935
PsuI RGATCY 2 cut(s) 788, 1719
PvuII CAGCTG 3 cut(s) 1568, 1622, 1946
RsaI GTAC 5 cut(s) 388, 853, 910, 1950, 2596
RsaNI GTAC 5 cut(s) 387, 852, 909, 1949, 2595
RseI CAYNNNNRTG 1 cut(s) 2352
SacI GAGCTC 1 cut(s) 1027
SaqAI TTAA 7 cut(s) 1350, 1590, 1827, 1842, 2085, 2324, 2717
Sau96I GGNCC 4 cut(s) 354, 1078, 1253, 2906
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 2 cut(s) 1178, 2492
ScrFI CCNGG 4 cut(s) 891, 1857, 2367, 2777
SduI GDGCHC 4 cut(s) 889, 1006, 1027, 2263
SfaNI GCATC 9 cut(s) 41, 87, 1346, 2218, 2324, 2718, 2729, 2899, 2922
SfcI CTRYAG 2 cut(s) 1494, 1941
Sfr274I CTCGAG 1 cut(s) 2400
SinI GGWCC 2 cut(s) 354, 1253
SlaI CTCGAG 1 cut(s) 2400
SmiMI CAYNNNNRTG 1 cut(s) 2352
SmlI CTYRAG 3 cut(s) 192, 2400, 2750
SmoI CTYRAG 3 cut(s) 192, 2400, 2750
SpeI ACTAGT 2 cut(s) 1049, 1148
SphI GCATGC 1 cut(s) 2059
SseBI AGGCCT 1 cut(s) 2829
SsiI CCGC 7 cut(s) 984, 1089, 1219, 2128, 2225, 2428, 2432
SspMI CTAG 5 cut(s) 36, 285, 837, 1050, 1149
SstI GAGCTC 1 cut(s) 1027
StuI AGGCCT 1 cut(s) 2829
StyD4I CCNGG 4 cut(s) 889, 1855, 2365, 2775
StyI CCWWGG 2 cut(s) 2174, 2220
TaaI ACNGT 5 cut(s) 1498, 1838, 1920, 2286, 2804
TaiI ACGT 1 cut(s) 1424
TaqI TCGA 6 cut(s) 6, 842, 2051, 2401, 2617, 2956
TatI WGTACW 3 cut(s) 386, 908, 1948
TauI GCSGC 1 cut(s) 986
TfiI GAWTC 2 cut(s) 8, 2619
Tru1I TTAA 7 cut(s) 1350, 1590, 1827, 1842, 2085, 2324, 2717
Tru9I TTAA 7 cut(s) 1350, 1590, 1827, 1842, 2085, 2324, 2717
TscAI CASTG 2 cut(s) 2291, 2878
TspDTI ATGAA 9 cut(s) 303, 822, 891, 978, 1380, 1542, 2214, 2336, 2459
TspGWI ACGGA 3 cut(s) 1509, 2058, 2579
TspRI CASTG 2 cut(s) 2291, 2878
VpaK11BI GGWCC 2 cut(s) 354, 1253
XapI RAATTY 4 cut(s) 1312, 1893, 2046, 2361
XceI RCATGY 3 cut(s) 157, 2059, 2871
XcmI CCANNNNNNNNNTGG 2 cut(s) 2283, 2459
XhoI CTCGAG 1 cut(s) 2400
XmiI GTMKAC 2 cut(s) 1424, 2067
XspI CTAG 5 cut(s) 36, 285, 837, 1050, 1149
ZrmI AGTACT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.