Prupe.5G136100_v2.0.a1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0007827
Physical Location & Seq
Forward (+)
12894264 .. 12901201
6938 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G136100.1

Sequence Viewer

Length: 3663 bp
ATGTTTGGTTCTACTAACTGTTCGTCTGGTTTTGGTCAGAAGCCTGTTTTTGGAGCATTTGGGTCCAATCCTACGCAACCAAGTCTTTTTGGAAGCACAACTCAGCCATCACAGCCAGCATTTGAGAGCAGTTTAGTTGGTTCCTCCACATCATTTGGTATATCAAGTCAGCCAGCATTTGGTGCTACCGCCACCCCAGCCTTTGGTGCTACAAGTAGTCCAGCCTTTGGTGCTACAAGCATCCCCCCAGCCTTTGGGGCTACAAGCAGTCCAGCCTTTGGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTTGGGGTGTCAAGTTCCTCCTTGTTTGGATCTACGGGAGCATTTGGAGCTTCAAGCACCCCAGCTTTTGGTTCATCTGGATCCACCGTTAGTACTTCAAGCAATTCGGGTTTTGGTGCGTCAAGTGCTCCAGGTTTTGGAAGCACAACTCAGCCATCACAGCTAGAATTTCGGAGCAGTATATTTGGTTCCTCCACAGCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACCCCATCCTTTGATGGTACAAGTAGTCCAGCCTTTACCTCCCCAGCCTTTGGTGCTACAAGCACCTCCCCAGCCTTTGGGGCTACAAGCACCTCCCCAGCCTTTGGGGCTACAAGCAGTCAGGCCTTTTGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTTGGGTCCAATCCTACTCAACCAAGTCCTTTTGGAAGCACAACTCAGCTATCACAGCCAGCATTTGAGAGCAGTATAGTTGGTTCCTCCACACCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACAGCAGCCTTTGGTGCTACCACCACTCCTGCGTTTGGTGCTACCACCACTCCTGCGTTTGGTGCTACAAGCAGCACCCCAGCGTTTGGTGCTACAAGCATCCCCCCAGCCTTTGGGGCTACAAGCAGTCCAGCCTTTGGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGTTCTGCATTTGGGGTGTCAAGTTCCTCCTTGTTTGGATCTACGGGAGCATTTGGAGCTTCAAGCACCCCAGCTTTTGGTTCATCTGGATCCACCATTGGTACTTCAAGCAATTCGGGTTTTGGTGCGTCAAGTGCTCCAGGTTTTGGAATCACAACTCAGCCATCACAGCTAGAATTTCGGAGCAGTATATTTGGTTCCTCCACAGCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACCCCATCCTTTGATGGTACAAGTAGTCCAGCCTTTACCACCCCAGCGTTTGGTGCTACAAGCACCTCCCCAGCCTTTGGGGCTACAAGCAGTCAGGCCTTTTGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTTGGGTCCAATCCTACTCAACCAAGTCCTTTTGGACGCACAACTCAGCCATCACAGCCAGCATTTGAGAGCAGTATAGTTGGTTCCTCCACACCATTTGGTGGATCAATTCAGCCAGCATTTGGTGCTACCACCACCCCAGCCTTTGGTGCTACCGCCACTCCAGCGTTTGGTGCTACAAGCAGCACCCCAGCCTTTGGGGCTACAAGCAGTCCAGCCTTTGGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTTGGGTCCAATCCTACTCAACCAAGTCCTTTTGGAAGCACAACTCAGCCATCACAGCTAGAATTTCGGAGCAGTATATTTGGTTCCTCCGCACCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACCCCATCCTTTGGTACAAGTAGTCCAGCCTTTGATGCTACAACCACCCCAGCGTTTGGTGCTACAAGCACCTCCCCAGCCTTTGGGGCTACAAGTAGTCCAGCCTTTGGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTTGGGTCCAATCCTACTCAACCAAGTCCTTTTGGAAGCACAACTCAGCCATCACAGCCAGCATTTCAGAGCAGTATAGTTGGTTCCTCCGCACCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCATCACCCCAACCTTTGGTGGTACAAGTAGTCCAGCCTTTGGTGCTACGACCACCCCAGCGTTTGGTGCTACGACCACCCCAGCGTTTGGTGCTACGACCACCCCAGCGTTTGGTGCTACAAGCACCTCGGCTTTTGGTGCTACTAGCACCCACCCTGCCTTTGGGGCTACAAGCAGTCCAGCCTTTGGTTCCACAAGAAGTCCTACATTGGGAAGCACAGGATCTGCATTCGGGGTGTCAAATTCCTCCTTGTTTGGATCTACGGGAGCATTTGGGGCTTCAAGCACCCCAGCTTTTGGTTCATCTGGATCCACCGTCGGTACTTCAAGCAATCCAGGTTTTGGTGCGTCAAGTGCTCCTGGTTTTGGTTCATCTATTACTCCATCTTTCAGCTTTACGTCAGCTCCTGCTTTTGGCCAATCAAATTCTACATTCGGTAGTGCCTCATCTCCATTTGGGGCACAGAGTTCTCCATTCGGAGCTCAGCCAACACCATTGGGGAACAATACCTTTGGGCAGTCAGCTTTTGGGGGCCAACAACGTAGGGGTAGTAGAATGGCTGCATATACAGAAACTCCTGAACCAGATGGTGGTAGTGGGGATACTGCTGCAAAATTGGATTCAGTATCAGCAATGCATGTATATAAAGACAAAAGTCACGAAGAACTTCGCTGGGAGGATTATCAATTGGGGGATAAAGGTGGTCCAGCTCCTGCAGGTGGGAGTGGCTTTGGCATGTCTACGGCACAACCAAACTCTTTGAATACTGCGTCATCATTTCCTCAAGCATCCACAAGCCCTTTTAATACCGCAACTGGACCTAATTTGTTTACTGCAAAAACTCCATCCTTCTCTTCCACTGGCTTTGGAACATCGTCTACACCATTCAGTTCATCATCTTTTGGTTCATCCAGTACTCCATCTTTCTGCTTTTCATCAGCTCCTGCTTTTGGCCAATCAAATTCTACATTTGGTAGTGCCTCGTCTTCTTTTGGAGCACAGAGTTCTCCATTCGGAACTCAGCCAACAACATTGGGGAACAATGCCTTTGGGCAGTCAGCTTTTGGGGGCCAACAACGTGGGGGTAGTAGAGTAGCTGCTTATGCGGAAACTCCTGAACCAGATGGTGATAGTGGCTATACTGCTGGGAAATTGGAGTCAATATCAGCAATGCCAGTATATAAGGACAAAAGTCATGAAGAACTTTGCTGGGAGGATTATCAATTGGGAGATAAAGCTCCTGCAGGTGGGAATGGCTTTGGCATGTCTATGTCACAACCAAACCCTTTGAATACTGCACCGTCATTTTCTCAAGCATCTACAAGCCTTTTTAATACCGCAACTTCATCTAGTTTGTTTGCAACAAAAACTCCACCCTTCTCTTCTACAGGCTTTGGAACATCGTCTACACTATTCAGTTCATCATCTTTTGGGTTTTCTATTTCATCCAGTATTTTACCCCATCATCATCTCATTCAGGTTTTGGGCAAACCTCATCTCCATCTCTCTTTAGTTCATCAATGCCATCCGCATTTTCATTTTCTGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1221

Amino Acids

118.98

Weight (kDa)

5.88

Isoelectric Point (pI)

60.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2819, 3347
Acc36I ACCTGC 2 cut(s) 2819, 3347
AccI GTMKAC 3 cut(s) 2852, 2990, 3518
AciI CCGC 8 cut(s) 189, 1587, 1785, 2070, 2922, 3218, 3450, 3641
AcoI YGGCCR 2 cut(s) 2527, 3064
AcsI RAATTY 6 cut(s) 488, 1214, 1757, 2353, 2536, 3073
AfaI GTAC 8 cut(s) 415, 580, 1141, 1306, 1846, 2134, 2434, 3028
AgsI TTSAA 8 cut(s) 375, 420, 1101, 1146, 2394, 2439, 2875, 3403
AjnI CCWGG 4 cut(s) 451, 1177, 2446, 2470
Alw21I GWGCWC 5 cut(s) 451, 1177, 2470, 2596, 3112
AoxI GGCC 6 cut(s) 684, 1383, 2527, 2644, 3064, 3181
ApeKI GCWGC 6 cut(s) 872, 939, 1614, 2672, 2720, 3209
ApoI RAATTY 6 cut(s) 488, 1214, 1757, 2353, 2536, 3073
Asp700I GAANNNNTTC 1 cut(s) 2778
AspS9I GGNCC 9 cut(s) 63, 738, 1437, 1701, 1986, 2644, 2816, 2930, 3181
AsuHPI GGTGA 2 cut(s) 2107, 3251
AvaII GGWCC 7 cut(s) 63, 738, 1437, 1701, 1986, 2816, 2930
BaeGI GKGCMC 1 cut(s) 2575
BalI TGGCCA 2 cut(s) 2529, 3066
BamHI GGATCC 3 cut(s) 401, 1127, 2420
BanII GRGCYC 1 cut(s) 2596
BbsI GAAGAC 1 cut(s) 3090
Bbv12I GWGCWC 5 cut(s) 451, 1177, 2470, 2596, 3112
BbvI GCAGC 6 cut(s) 884, 951, 1626, 2659, 2707, 3196
BceAI ACGGC 1 cut(s) 2871
BciT130I CCWGG 4 cut(s) 453, 1179, 2448, 2472
BciVI GTATCC 1 cut(s) 2707
BfaI CTAG 5 cut(s) 485, 1211, 1754, 2256, 3462
BfmI CTRYAG 3 cut(s) 2826, 3354, 3498
BfuAI ACCTGC 2 cut(s) 2819, 3347
BfuI GTATCC 1 cut(s) 2707
BglI GCCNNNNNGGC 8 cut(s) 257, 641, 668, 983, 1367, 1631, 1916, 2276
BisI GCNGC 6 cut(s) 873, 940, 1615, 2673, 2721, 3210
BlpI GCTNAGC 1 cut(s) 2595
BlsI GCNGC 6 cut(s) 874, 941, 1616, 2674, 2722, 3211
BmcAI AGTACT 2 cut(s) 415, 3028
Bme1390I CCNGG 4 cut(s) 453, 1179, 2448, 2472
Bme18I GGWCC 7 cut(s) 63, 738, 1437, 1701, 1986, 2816, 2930
BmgT120I GGNCC 9 cut(s) 63, 738, 1437, 1701, 1986, 2644, 2816, 2930, 3181
BmrFI CCNGG 4 cut(s) 453, 1179, 2448, 2472
BmsI GCATC 5 cut(s) 249, 975, 1855, 2909, 3437
BoxI GACNNNNGTC 2 cut(s) 2766, 3303
BpiI GAAGAC 1 cut(s) 3090
BpmI CTGGAG 3 cut(s) 435, 1161, 1578
Bpu1102I GCTNAGC 1 cut(s) 2595
BpuEI CTTGAG 2 cut(s) 2880, 3408
BsaJI CCNNGG 1 cut(s) 2238
Bse1I ACTGG 5 cut(s) 2932, 2977, 3024, 3287, 3561
Bse3DI GCAATG 2 cut(s) 2751, 3288
BseBI CCWGG 4 cut(s) 453, 1179, 2448, 2472
BseDI CCNNGG 1 cut(s) 2238
BseMI GCAATG 2 cut(s) 2751, 3288
BseMII CTCAG 9 cut(s) 116, 485, 791, 1211, 1490, 1754, 2039, 2609, 3146
BseNI ACTGG 5 cut(s) 2932, 2977, 3024, 3287, 3561
BseSI GKGCMC 1 cut(s) 2575
BseXI GCAGC 6 cut(s) 884, 951, 1626, 2659, 2707, 3196
BsgI GTGCAG 1 cut(s) 3393
BshFI GGCC 6 cut(s) 686, 1385, 2529, 2646, 3066, 3183
BsiHKAI GWGCWC 5 cut(s) 451, 1177, 2470, 2596, 3112
BsmI GAATGC 1 cut(s) 2339
BsnI GGCC 6 cut(s) 686, 1385, 2529, 2646, 3066, 3183
Bsp1286I GDGCHC 6 cut(s) 451, 1177, 2470, 2575, 2596, 3112
Bsp1720I GCTNAGC 1 cut(s) 2595
BspACI CCGC 8 cut(s) 189, 1587, 1785, 2070, 2922, 3218, 3450, 3641
BspANI GGCC 6 cut(s) 686, 1385, 2529, 2646, 3066, 3183
BspCNI CTCAG 9 cut(s) 115, 484, 790, 1210, 1489, 1753, 2038, 2608, 3145
BspHI TCATGA 1 cut(s) 3307
BspMAI CTGCAG 2 cut(s) 2830, 3358
BspMI ACCTGC 2 cut(s) 2819, 3347
BsrDI GCAATG 2 cut(s) 2751, 3288
BsrI ACTGG 5 cut(s) 2932, 2977, 3024, 3287, 3561
BssECI CCNNGG 1 cut(s) 2238
Bst2UI CCWGG 4 cut(s) 453, 1179, 2448, 2472
Bst4CI ACNGT 4 cut(s) 20, 409, 2428, 3414
Bst6I CTCTTC 2 cut(s) 2971, 3499
BstAPI GCANNNNNTGC 7 cut(s) 182, 551, 857, 1277, 1556, 1820, 2105
BstDEI CTNAG 9 cut(s) 102, 471, 777, 1197, 1476, 1740, 2025, 2595, 3132
BstNI CCWGG 4 cut(s) 453, 1179, 2448, 2472
BstNSI RCATGY 3 cut(s) 2753, 2851, 3379
BstPAI GACNNNNGTC 2 cut(s) 2766, 3303
BstSCI CCNGG 4 cut(s) 451, 1177, 2446, 2470
BstSFI CTRYAG 3 cut(s) 2826, 3354, 3498
BstSLI GKGCMC 1 cut(s) 2575
BstV1I GCAGC 6 cut(s) 884, 951, 1626, 2659, 2707, 3196
BstV2I GAAGAC 1 cut(s) 3090
BstXI CCANNNNNNTGG 1 cut(s) 3191
BsuI GTATCC 1 cut(s) 2707
BsuRI GGCC 6 cut(s) 686, 1385, 2529, 2646, 3066, 3183
BtsIMutI CAGTG 1 cut(s) 2970
BveI ACCTGC 2 cut(s) 2819, 3347
CciI TCATGA 1 cut(s) 3307
Cfr13I GGNCC 9 cut(s) 63, 738, 1437, 1701, 1986, 2644, 2816, 2930, 3181
CseI GACGC 5 cut(s) 429, 1155, 1476, 2448, 2871
Csp6I GTAC 8 cut(s) 414, 579, 1140, 1305, 1845, 2133, 2433, 3027
CviAII CATG 4 cut(s) 2750, 2848, 3308, 3376
CviQI GTAC 8 cut(s) 414, 579, 1140, 1305, 1845, 2133, 2433, 3027
DdeI CTNAG 9 cut(s) 102, 471, 777, 1197, 1476, 1740, 2025, 2595, 3132
EaeI YGGCCR 2 cut(s) 2527, 3064
Eam1104I CTCTTC 2 cut(s) 2971, 3499
EarI CTCTTC 2 cut(s) 2971, 3499
Ecl136II GAGCTC 1 cut(s) 2594
Eco147I AGGCCT 2 cut(s) 686, 1385
Eco24I GRGCYC 1 cut(s) 2596
Eco47I GGWCC 7 cut(s) 63, 738, 1437, 1701, 1986, 2816, 2930
Eco53kI GAGCTC 1 cut(s) 2594
EcoICRI GAGCTC 1 cut(s) 2594
EcoRII CCWGG 4 cut(s) 451, 1177, 2446, 2470
EcoT22I ATGCAT 1 cut(s) 2751
EcoT38I GRGCYC 1 cut(s) 2596
FaeI CATG 4 cut(s) 2753, 2851, 3311, 3379
FatI CATG 4 cut(s) 2749, 2847, 3307, 3375
FblI GTMKAC 3 cut(s) 2852, 2990, 3518
Fnu4HI GCNGC 6 cut(s) 873, 940, 1615, 2673, 2721, 3210
FriOI GRGCYC 1 cut(s) 2596
Fsp4HI GCNGC 6 cut(s) 873, 940, 1615, 2673, 2721, 3210
FspBI CTAG 5 cut(s) 485, 1211, 1754, 2256, 3462
GluI GCNGC 6 cut(s) 873, 940, 1615, 2673, 2721, 3210
GsuI CTGGAG 3 cut(s) 435, 1161, 1578
HaeIII GGCC 6 cut(s) 686, 1385, 2529, 2646, 3066, 3183
HgaI GACGC 5 cut(s) 429, 1155, 1476, 2448, 2871
Hin1II CATG 4 cut(s) 2753, 2851, 3311, 3379
HinfI GANTC 3 cut(s) 1188, 2732, 3269
HphI GGTGA 2 cut(s) 2107, 3251
Hpy166II GTNNAC 4 cut(s) 2853, 2943, 2991, 3519
Hpy188I TCNGA 7 cut(s) 39, 495, 1221, 1764, 2049, 2591, 3128
Hpy188III TCNNGA 7 cut(s) 399, 1125, 2418, 2690, 2771, 3227, 3308
Hpy8I GTNNAC 4 cut(s) 2853, 2943, 2991, 3519
Hpy99I CGWCG 1 cut(s) 2432
HpyAV CCTTC 2 cut(s) 2971, 3499
HpyCH4III ACNGT 4 cut(s) 20, 409, 2428, 3414
HpyCH4IV ACGT 9 cut(s) 299, 710, 1025, 1409, 1673, 1958, 2510, 2653, 3190
HpyF3I CTNAG 9 cut(s) 102, 471, 777, 1197, 1476, 1740, 2025, 2595, 3132
HpySE526I ACGT 9 cut(s) 299, 710, 1025, 1409, 1673, 1958, 2510, 2653, 3190
Hsp92II CATG 4 cut(s) 2753, 2851, 3311, 3379
Lsp1109I GCAGC 6 cut(s) 884, 951, 1626, 2659, 2707, 3196
LweI GCATC 5 cut(s) 249, 975, 1855, 2909, 3437
MaeI CTAG 5 cut(s) 485, 1211, 1754, 2256, 3462
MaeII ACGT 9 cut(s) 299, 710, 1025, 1409, 1673, 1958, 2510, 2653, 3190
MaeIII GTNAC 2 cut(s) 2768, 3384
MboII GAAGA 5 cut(s) 2786, 2958, 3090, 3323, 3486
MfeI CAATTG 2 cut(s) 2798, 3335
MhlI GDGCHC 6 cut(s) 451, 1177, 2470, 2575, 2596, 3112
MlsI TGGCCA 2 cut(s) 2529, 3066
MluNI TGGCCA 2 cut(s) 2529, 3066
MlyI GAGTC 1 cut(s) 3278
Mox20I TGGCCA 2 cut(s) 2529, 3066
Mph1103I ATGCAT 1 cut(s) 2751
MroXI GAANNNNTTC 1 cut(s) 2778
MscI TGGCCA 2 cut(s) 2529, 3066
MseI TTAA 2 cut(s) 2916, 3444
MslI CAYNNNNRTG 1 cut(s) 3380
Msp20I TGGCCA 2 cut(s) 2529, 3066
MspR9I CCNGG 4 cut(s) 453, 1179, 2448, 2472
MunI CAATTG 2 cut(s) 2798, 3335
Mva1269I GAATGC 1 cut(s) 2339
MvaI CCWGG 4 cut(s) 453, 1179, 2448, 2472
NlaIII CATG 4 cut(s) 2753, 2851, 3311, 3379
NmeAIII GCCGAG 1 cut(s) 2219
NmuCI GTSAC 2 cut(s) 2768, 3384
NsiI ATGCAT 1 cut(s) 2751
NspI RCATGY 3 cut(s) 2753, 2851, 3379
PagI TCATGA 1 cut(s) 3307
PaqCI CACCTGC 2 cut(s) 2819, 3347
PceI AGGCCT 2 cut(s) 686, 1385
PctI GAATGC 1 cut(s) 2339
PdmI GAANNNNTTC 1 cut(s) 2778
PfeI GAWTC 2 cut(s) 1188, 2732
PkrI GCNGC 6 cut(s) 874, 941, 1616, 2674, 2722, 3211
PleI GAGTC 1 cut(s) 3277
PpsI GAGTC 1 cut(s) 3277
PshAI GACNNNNGTC 2 cut(s) 2766, 3303
Psp124BI GAGCTC 1 cut(s) 2596
Psp6I CCWGG 4 cut(s) 451, 1177, 2446, 2470
PspGI CCWGG 4 cut(s) 451, 1177, 2446, 2470
PspPI GGNCC 9 cut(s) 63, 738, 1437, 1701, 1986, 2644, 2816, 2930, 3181
PstI CTGCAG 2 cut(s) 2830, 3358
RsaI GTAC 8 cut(s) 415, 580, 1141, 1306, 1846, 2134, 2434, 3028
RsaNI GTAC 8 cut(s) 414, 579, 1140, 1305, 1845, 2133, 2433, 3027
RseI CAYNNNNRTG 1 cut(s) 3380
SacI GAGCTC 1 cut(s) 2596
SaqAI TTAA 2 cut(s) 2916, 3444
SatI GCNGC 6 cut(s) 873, 940, 1615, 2673, 2721, 3210
Sau96I GGNCC 9 cut(s) 63, 738, 1437, 1701, 1986, 2644, 2816, 2930, 3181
SbfI CCTGCAGG 2 cut(s) 2830, 3358
ScaI AGTACT 2 cut(s) 415, 3028
SchI GAGTC 1 cut(s) 3278
ScrFI CCNGG 4 cut(s) 453, 1179, 2448, 2472
SdaI CCTGCAGG 2 cut(s) 2830, 3358
SduI GDGCHC 6 cut(s) 451, 1177, 2470, 2575, 2596, 3112
SfaNI GCATC 5 cut(s) 249, 975, 1855, 2909, 3437
SfcI CTRYAG 3 cut(s) 2826, 3354, 3498
SinI GGWCC 7 cut(s) 63, 738, 1437, 1701, 1986, 2816, 2930
SmiMI CAYNNNNRTG 1 cut(s) 3380
SmlI CTYRAG 2 cut(s) 2895, 3423
SmoI CTYRAG 2 cut(s) 2895, 3423
Sse8387I CCTGCAGG 2 cut(s) 2830, 3358
SseBI AGGCCT 2 cut(s) 686, 1385
SsiI CCGC 8 cut(s) 189, 1587, 1785, 2070, 2922, 3218, 3450, 3641
SspMI CTAG 5 cut(s) 485, 1211, 1754, 2256, 3462
SstI GAGCTC 1 cut(s) 2596
StuI AGGCCT 2 cut(s) 686, 1385
StyD4I CCNGG 4 cut(s) 451, 1177, 2446, 2470
TaaI ACNGT 4 cut(s) 20, 409, 2428, 3414
TaiI ACGT 9 cut(s) 302, 713, 1028, 1412, 1676, 1961, 2513, 2656, 3193
TatI WGTACW 2 cut(s) 413, 3026
TfiI GAWTC 2 cut(s) 1188, 2732
Tru1I TTAA 2 cut(s) 2916, 3444
Tru9I TTAA 2 cut(s) 2916, 3444
TscAI CASTG 1 cut(s) 2977
TseFI GTSAC 2 cut(s) 2768, 3384
TseI GCWGC 6 cut(s) 872, 939, 1614, 2672, 2720, 3209
Tsp45I GTSAC 2 cut(s) 2768, 3384
TspRI CASTG 1 cut(s) 2977
VpaK11BI GGWCC 7 cut(s) 63, 738, 1437, 1701, 1986, 2816, 2930
XapI RAATTY 6 cut(s) 488, 1214, 1757, 2353, 2536, 3073
XceI RCATGY 3 cut(s) 2753, 2851, 3379
XcmI CCANNNNNNNNNTGG 1 cut(s) 2270
XmiI GTMKAC 3 cut(s) 2852, 2990, 3518
XmnI GAANNNNTTC 1 cut(s) 2778
XspI CTAG 5 cut(s) 485, 1211, 1754, 2256, 3462
ZrmI AGTACT 2 cut(s) 415, 3028
Zsp2I ATGCAT 1 cut(s) 2751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.