Rh7DG093600

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0007827
Physical Location & Seq
Forward (+)
7863625 .. 7868726
5102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG093600.1

Sequence Viewer

Length: 3039 bp
ATGTTTGGTTCTACGAGCCCTTTTGGGCAGTCATCTAACAGCCCATTTGGGTCCCAGTCGGTGTTTGGGCAAAGCAGCAACACAAGTAACAATCCTTTTGCTCCCCAGCCCTTTGGTAGCACCACTCCATTTGGTGCCCAGACAGGGAGTTCCCTATTTGGGGGAACTTCAACTGGCGTATTTGGTCAAACCCAATCCTCACCTTTTGGTGCTTCATCCTCACCAGCTTTCGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCACCATCATCCACTCAAACAAGTCCATTTGGTGGAGCATCTGGTACGTCTGCTTTTGGTCAGAAGCCCGCTTTTGGAGCATTTGGGTCGAGTCCTGCTCAAACAAGTCCATTTGGAAGCACAGCTCAACCATCACAACCAGCATTTGGAAGCAATATGTTTGGTGCCACCTCTACAGCATTTGGCGCAAGTCAGCCTGCATTTGGCACTAATACTGCCCCAGCCTTTGGTTCAACGAATGCCACAGGCTTTGGTGGCCAGAGCACCCCTGGTTTTGGTGGCCAAGGCACTCCAGCCTTTGGGGCCACAAGCGCTTCACCTTTTGGTAGTACAAGTACTCCGGCGTTTGGTGCTCCAAGTACTCCTACCTTTGGCTCAACACCAAGTCCTACATTTGGAAGCACAGGATCTGCATTTGGGACAACAAGTTCCAACTTGTTTGGATCAGGGGCAGCATTTGGGGCTTCAACCACCCCAGCTTTTGGTCAATCTAGCTCAGCTTTTGGTACTACAACAAGTGCTCCTGCTTTTGGTCAATCAAGTTCAGGTTTTGGCTTTTCAACAAGTGCTCCTGCATTTGGCCAATCAAGTTCAACCTTTGGTAGCACCCAATTTGCGGCTTCATCTCCTTTCGGAGCGCAGAGTTCGCCATCTCCTTTCGGAGGGCAGAGTTCGCCATTTGGGGCTCAGTCAACAACACCAACACTTGGAAACACTGCCTTTGGACAGCCAGCTTTTGGGGGCCAACGGGGTGGAAGTAGAGTGGCTGCTTACACAGGCACATCTGAACCGGATAGTAATGGAATGGGGAAATTGGAGTCAATATCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAATTGAGATGGGAGGATTACCAATTAGGGGATAAGGGTGGACCGTCTCCTGCTGGTGCGGGTAGCTTTGGTGTATCAACTGTTCAGACAAGTACTTTGAATCCTAATCCTGCACCATCGTTTTCTCAAACATCTTCAAGTCCTTTTAATACCTCAACCTCATCTGGTTTATTTGCCCAAAAACCCTCATCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATTTTTTTACACCTGCATCATCTGCGTCACCATTTGGCCAAACGTCGTCTCCAGCTATTTTTAGTTCACCATCTTCCTTTTCATTCTCTACCCCAGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCCTTTGGGCTGAATCCATCTACCTTTGGTTCAAACTTGTTCAATAGTACTTCCAGTTTGCAGAGCAGTTCATTGGGCACTACCAGCAACCAACTGGGTCTTACTCAAGCAGCTCCTGCTTTTCCTACTTTCCAGACATCTCAGCCTCTTCAGTCTAGTCTTTTTGGCTTCAGCAACACCAATGCCTTCAACAACACCAACACCTTTAATCAACCCCAGCCAGGCAACACAGGTGGTTTTGGTGGTTTAGCAGGCATTTCTGGTCAGAACAACTTTGGACAATCGTCTGTCACTCAAGGCTCTGCAGCTGTACAACAACCAGTACCTGCTACAAATCCATTTGGAACGCTCCCCGCGATGCCGCAGATGTCAATTGGTCGTGGGGGAACTGCACCATCAATTCAATATGGAATTTCAAGCATGCCTGTTGCGGATAAACCTGCGCCCGTTAGGGTAACATCCATCCTGACTCCTCGACACCTGTCACAACGCCGGATCAGATTACCTGCAAGAAAATATAATCCTAAGAATGATAACCCAAAGGCTTTTTTTAGTGATGATGAAGAAACACCCTCTACACCCAAGGGGGATGTTGTTTTCCATCCCAGGGAAAACCCAAGAGCACTTGTCATTCGTCCCCAGGAACAGTGGCCTCTAAGAGCGAGTGCTGAGAAAGCAACAGCACTGAAGAATGCCCATGAGAATGGAAAAATTTCGGGAGCAGCACTCTTCGGGGGATCCAACTCTGAGGATAAAGACGAACCAGAAACTCTGCAAGAAAATGGTGCTGTCAAGGAGCATTTAAATCATGTCAAGGCTAATCAGAAACCTAATGGAGTACATGATGATCACTCTATTCAGAAAGGGGACTCGTATACAACACTAAGTGGGCACAGAGCTGGTGAGGCTGCAATTGTGTATGAGCATGGTGCTGACATTGAGGCACAAATGCCGAAGCTCCGACGCTCTGATTACTACACAGAGCCCCGAATCCAAGAACTGGCGGCAAAGGAAAGGGCAGAGCCAGGGTTCTGCTGTCGTGTGAAGGACTTTGTGGTTGGGCGACATGGTTGTGGTAGCATTAAGTTCTTGGGTGAGACAGATGTAAGGCGCCTTGATCTTGAGGCTCTGGTGCAGTTCAATAATAAGGAGGTAATCGTGTACCGTGATGAGAACAAGAAGCCTCCTGTCGGGCAAGGGCTTAATAAACCTGCTGAGGTTACACTTCTCAACATTAAATGCATTGAGAAGAAGACTGGGCTTCAGTATACAGAAGGACCAAAAGTTGAGAAATACAAGGAGATGCTGAAGAGGAAGGCCGAGGAACAAGGTGCCAAGTTTGTCTCCTTTGACCCAAAGAAGGAAGAGTGGACGTTCATGGTCGACCACTTCAGTGAGTACAAGTTGAGAGATGAAGACGACTGGGATGTGGATGCTGCCCAAGATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1012

Amino Acids

104.71

Weight (kDa)

6.88

Isoelectric Point (pI)

57.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 368 - 387 3.4e-06 Nup98, Gle2-binding sequence
Nucleoporin2 PF04096 852 - 998 2.7e-44 Nup98-96 autopeptidase S59
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1435
Acc36I ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2806
AccB1I GGYRCC 4 cut(s) 134, 443, 2697, 2918
AccB7I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2587
AccI GTMKAC 3 cut(s) 2462, 2855, 2970
AccII CGCG 1 cut(s) 1943
AciI CCGC 7 cut(s) 348, 896, 1199, 1941, 1949, 2018, 2591
AclWI GGATC 5 cut(s) 694, 730, 2090, 2319, 2332
AcoI YGGCCR 4 cut(s) 535, 559, 859, 1450
AcsI RAATTY 2 cut(s) 1998, 2298
AcuI CTGAAG 6 cut(s) 1721, 1741, 2294, 2834, 2915, 2962
AcyI GRCGYC 1 cut(s) 2698
AdeI CACNNNGTG 1 cut(s) 2474
AfeI AGCGCT 1 cut(s) 592
AjnI CCWGG 5 cut(s) 547, 1807, 2192, 2226, 2611
AleI CACNNNNGTG 1 cut(s) 2979
AloI GAACNNNNNNTCC 2 cut(s) 691, 723
Alw21I GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
Alw26I GTCTC 4 cut(s) 1191, 1467, 2678, 2935
Alw44I GTGCAC 1 cut(s) 279
AlwI GGATC 5 cut(s) 694, 730, 2090, 2319, 2332
AlwNI CAGNNNCTG 3 cut(s) 689, 1703, 1913
Aor51HI AGCGCT 1 cut(s) 592
AoxI GGCC 8 cut(s) 535, 559, 582, 859, 1021, 1450, 2237, 2904
ApaLI GTGCAC 1 cut(s) 279
ApeKI GCWGC 8 cut(s) 75, 731, 1046, 1697, 1892, 2309, 2495, 3023
ApoI RAATTY 2 cut(s) 1998, 2298
ArsI GACNNNNNNTTYG 2 cut(s) 1219, 1251
Asp700I GAANNNNTTC 1 cut(s) 2299
AspLEI GCGC 5 cut(s) 467, 593, 919, 2032, 2700
AspS9I GGNCC 5 cut(s) 51, 582, 1021, 1181, 2864
AsuHPI GGTGA 9 cut(s) 192, 213, 588, 1359, 1377, 1434, 1473, 2501, 2693
AvaII GGWCC 3 cut(s) 51, 1181, 2864
BaeGI GKGCMC 4 cut(s) 139, 283, 1667, 2481
BalI TGGCCA 4 cut(s) 537, 561, 861, 1452
BamHI GGATCC 1 cut(s) 2324
BanI GGYRCC 4 cut(s) 134, 443, 2697, 2918
BanII GRGCYC 3 cut(s) 20, 967, 2574
BauI CACGAG 1 cut(s) 1136
BbsI GAAGAC 2 cut(s) 2846, 3009
Bbv12I GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
BbvCI CCTCAGC 1 cut(s) 2802
BbvI GCAGC 8 cut(s) 87, 743, 1033, 1709, 1904, 2321, 2482, 3010
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 5 cut(s) 549, 1809, 2194, 2228, 2613
BclI TGATCA 1 cut(s) 2434
BcoDI GTCTC 4 cut(s) 1191, 1467, 2678, 2935
BfaI CTAG 2 cut(s) 771, 1743
BfmI CTRYAG 2 cut(s) 453, 1890
BfoI RGCGCY 2 cut(s) 594, 2701
BfuAI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2806
BglI GCCNNNNNGGC 1 cut(s) 581
BlpI GCTNAGC 1 cut(s) 775
BmcAI AGTACT 4 cut(s) 616, 640, 1234, 1636
Bme1390I CCNGG 5 cut(s) 549, 1809, 2194, 2228, 2613
Bme18I GGWCC 3 cut(s) 51, 1181, 2864
BmgT120I GGNCC 5 cut(s) 51, 582, 1021, 1181, 2864
BmiI GGNNCC 9 cut(s) 52, 53, 136, 445, 583, 1022, 2326, 2699, 2920
BmrFI CCNGG 5 cut(s) 549, 1809, 2194, 2228, 2613
BmrI ACTGGG 4 cut(s) 49, 1691, 2853, 3019
BmsI GCATC 6 cut(s) 266, 326, 1439, 1935, 2880, 3010
BmuI ACTGGG 4 cut(s) 49, 1691, 2853, 3019
BoxI GACNNNNGTC 2 cut(s) 1870, 2068
BpiI GAAGAC 2 cut(s) 2846, 3009
BplI GAGNNNNNCTC 4 cut(s) 361, 393, 2298, 2330
BpmI CTGGAG 3 cut(s) 252, 555, 1449
Bpu10I CCTNAGC 1 cut(s) 2802
Bpu1102I GCTNAGC 1 cut(s) 775
BpuEI CTTGAG 3 cut(s) 1677, 1866, 2729
BsaHI GRCGYC 1 cut(s) 2698
BsaJI CCNNGG 8 cut(s) 547, 562, 2169, 2192, 2193, 2226, 2612, 2907
BsaWI WCCGGW 1 cut(s) 1069
BsaXI ACNNNNNCTCC 8 cut(s) 601, 631, 784, 814, 832, 862, 1447, 1477
Bse1I ACTGG 9 cut(s) 55, 178, 1348, 1641, 1686, 1907, 2592, 2848, 3014
Bse3DI GCAATG 1 cut(s) 1116
BseBI CCWGG 5 cut(s) 549, 1809, 2194, 2228, 2613
BseDI CCNNGG 8 cut(s) 547, 562, 2169, 2192, 2193, 2226, 2612, 2907
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 6 cut(s) 789, 980, 1742, 2247, 2325, 2793
BseNI ACTGG 9 cut(s) 55, 178, 1348, 1641, 1686, 1907, 2592, 2848, 3014
BseRI GAGGAG 1 cut(s) 2049
BseSI GKGCMC 4 cut(s) 139, 283, 1667, 2481
BseXI GCAGC 8 cut(s) 87, 743, 1033, 1709, 1904, 2321, 2482, 3010
BseYI CCCAGC 5 cut(s) 105, 499, 754, 1507, 1803
BsgI GTGCAG 3 cut(s) 1236, 1962, 2741
Bsh1236I CGCG 1 cut(s) 1943
BshFI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2906
BshNI GGYRCC 4 cut(s) 134, 443, 2697, 2918
BsiHKAI GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
BsiSI CCGG 3 cut(s) 620, 1070, 2080
BslFI GGGAC 4 cut(s) 37, 712, 2208, 2468
BsmAI GTCTC 4 cut(s) 1191, 1467, 2678, 2935
BsmBI CGTCTC 2 cut(s) 1191, 1467
BsmFI GGGAC 4 cut(s) 37, 712, 2208, 2468
BsmI GAATGC 2 cut(s) 523, 2284
BsnI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2906
Bsp1407I TGTACA 1 cut(s) 1897
Bsp143I GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
Bsp1720I GCTNAGC 1 cut(s) 775
BspACI CCGC 7 cut(s) 348, 896, 1199, 1941, 1949, 2018, 2591
BspANI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2906
BspCNI CTCAG 6 cut(s) 788, 979, 1741, 2248, 2326, 2794
BspFNI CGCG 1 cut(s) 1943
BspLI GGNNCC 9 cut(s) 52, 53, 136, 445, 583, 1022, 2326, 2699, 2920
BspMAI CTGCAG 1 cut(s) 1894
BspMI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2806
BspPI GGATC 5 cut(s) 694, 730, 2090, 2319, 2332
BspT107I GGYRCC 4 cut(s) 134, 443, 2697, 2918
BsrDI GCAATG 1 cut(s) 1116
BsrGI TGTACA 1 cut(s) 1897
BsrI ACTGG 9 cut(s) 55, 178, 1348, 1641, 1686, 1907, 2592, 2848, 3014
BssECI CCNNGG 8 cut(s) 547, 562, 2169, 2192, 2193, 2226, 2612, 2907
BssMI GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
BssNAI GTATAC 2 cut(s) 2463, 2856
BssNI GRCGYC 1 cut(s) 2698
BssSI CACGAG 1 cut(s) 1136
BssT1I CCWWGG 2 cut(s) 562, 2169
Bst1107I GTATAC 2 cut(s) 2463, 2856
Bst2BI CACGAG 1 cut(s) 1136
Bst2UI CCWGG 5 cut(s) 549, 1809, 2194, 2228, 2613
Bst4CI ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2753
Bst6I CTCTTC 4 cut(s) 1740, 2321, 2891, 2946
BstACI GRCGYC 1 cut(s) 2698
BstAPI GCANNNNNTGC 3 cut(s) 278, 1436, 1703
BstAUI TGTACA 1 cut(s) 1897
BstC8I GCNNGC 6 cut(s) 348, 477, 1011, 1116, 1840, 2009
BstDEI CTNAG 9 cut(s) 775, 966, 1728, 2112, 2243, 2256, 2334, 2471, 2802
BstENI CCTNNNNNAGG 1 cut(s) 939
BstFNI CGCG 1 cut(s) 1943
BstH2I RGCGCY 2 cut(s) 594, 2701
BstHHI GCGC 5 cut(s) 467, 593, 919, 2032, 2700
BstKTI GATC 6 cut(s) 689, 725, 2085, 2327, 2437, 2707
BstMAI GTCTC 4 cut(s) 1191, 1467, 2678, 2935
BstMBI GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
BstNI CCWGG 5 cut(s) 549, 1809, 2194, 2228, 2613
BstNSI RCATGY 1 cut(s) 2011
BstPAI GACNNNNGTC 2 cut(s) 1870, 2068
BstSCI CCNGG 5 cut(s) 547, 1807, 2192, 2226, 2611
BstSFI CTRYAG 2 cut(s) 453, 1890
BstSLI GKGCMC 4 cut(s) 139, 283, 1667, 2481
BstUI CGCG 1 cut(s) 1943
BstV1I GCAGC 8 cut(s) 87, 743, 1033, 1709, 1904, 2321, 2482, 3010
BstV2I GAAGAC 2 cut(s) 2846, 3009
BstX2I RGATCY 2 cut(s) 686, 2324
BstXI CCANNNNNNTGG 3 cut(s) 113, 1031, 2291
BstYI RGATCY 2 cut(s) 686, 2324
BstZ17I GTATAC 2 cut(s) 2463, 2856
BsuRI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2906
BtgZI GCGATG 1 cut(s) 1958
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 4 cut(s) 993, 2240, 2270, 2986
BveI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2806
Cac8I GCNNGC 6 cut(s) 348, 477, 1011, 1116, 1840, 2009
CaiI CAGNNNCTG 3 cut(s) 689, 1703, 1913
CfoI GCGC 5 cut(s) 467, 593, 919, 2032, 2700
Cfr13I GGNCC 5 cut(s) 51, 582, 1021, 1181, 2864
CseI GACGC 2 cut(s) 1428, 2559
CspCI CAANNNNNGTGG 6 cut(s) 112, 147, 511, 546, 1801, 1836
CviAII CATG 7 cut(s) 2008, 2285, 2396, 2429, 2513, 2654, 2965
DdeI CTNAG 9 cut(s) 775, 966, 1728, 2112, 2243, 2256, 2334, 2471, 2802
DinI GGCGCC 1 cut(s) 2699
DpnI GATC 6 cut(s) 688, 724, 2084, 2326, 2436, 2706
DpnII GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
DraI TTTAAA 1 cut(s) 2391
DraIII CACNNNGTG 1 cut(s) 2474
EaeI YGGCCR 4 cut(s) 535, 559, 859, 1450
Eam1104I CTCTTC 4 cut(s) 1740, 2321, 2891, 2946
EarI CTCTTC 4 cut(s) 1740, 2321, 2891, 2946
Eco130I CCWWGG 2 cut(s) 562, 2169
Eco24I GRGCYC 3 cut(s) 20, 967, 2574
Eco47I GGWCC 3 cut(s) 51, 1181, 2864
Eco47III AGCGCT 1 cut(s) 592
Eco57I CTGAAG 6 cut(s) 1721, 1741, 2294, 2834, 2915, 2962
EcoNI CCTNNNNNAGG 1 cut(s) 939
EcoO109I RGGNCCY 1 cut(s) 51
EcoRII CCWGG 5 cut(s) 547, 1807, 2192, 2226, 2611
EcoT14I CCWWGG 2 cut(s) 562, 2169
EcoT22I ATGCAT 1 cut(s) 2831
EcoT38I GRGCYC 3 cut(s) 20, 967, 2574
EgeI GGCGCC 1 cut(s) 2699
EheI GGCGCC 1 cut(s) 2699
ErhI CCWWGG 2 cut(s) 562, 2169
Esp3I CGTCTC 2 cut(s) 1191, 1467
FaeI CATG 7 cut(s) 2011, 2288, 2399, 2432, 2516, 2657, 2968
FaqI GGGAC 4 cut(s) 37, 712, 2208, 2468
FatI CATG 7 cut(s) 2007, 2284, 2395, 2428, 2512, 2653, 2964
FauI CCCGC 3 cut(s) 355, 1192, 1948
FbaI TGATCA 1 cut(s) 2434
FblI GTMKAC 3 cut(s) 2462, 2855, 2970
FriOI GRGCYC 3 cut(s) 20, 967, 2574
FspBI CTAG 2 cut(s) 771, 1743
GlaI GCGC 5 cut(s) 466, 592, 918, 2031, 2699
GsaI CCCAGC 5 cut(s) 109, 503, 758, 1511, 1807
GsuI CTGGAG 3 cut(s) 252, 555, 1449
HaeII RGCGCY 2 cut(s) 594, 2701
HaeIII GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2906
HapII CCGG 3 cut(s) 620, 1070, 2080
HgaI GACGC 2 cut(s) 1428, 2559
HhaI GCGC 5 cut(s) 467, 593, 919, 2032, 2700
Hin1I GRCGYC 1 cut(s) 2698
Hin1II CATG 7 cut(s) 2011, 2288, 2399, 2432, 2516, 2657, 2968
Hin6I GCGC 5 cut(s) 465, 591, 917, 2030, 2698
HinP1I GCGC 5 cut(s) 465, 591, 917, 2030, 2698
HincII GTYRAC 2 cut(s) 972, 2971
HindII GTYRAC 2 cut(s) 972, 2971
HinfI GANTC 7 cut(s) 370, 1097, 1240, 1600, 2056, 2456, 2577
HpaII CCGG 3 cut(s) 620, 1070, 2080
HphI GGTGA 9 cut(s) 192, 213, 588, 1359, 1377, 1434, 1473, 2501, 2693
Hpy166II GTNNAC 9 cut(s) 281, 972, 1181, 1481, 2463, 2749, 2856, 2958, 2971
Hpy188III TCNNGA 5 cut(s) 1136, 1720, 2053, 2304, 2708
Hpy8I GTNNAC 9 cut(s) 281, 972, 1181, 1481, 2463, 2749, 2856, 2958, 2971
Hpy99I CGWCG 2 cut(s) 1462, 2553
HpyAV CCTTC 6 cut(s) 1347, 1783, 2626, 2855, 2896, 2941
HpyCH4III ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2753
HpyCH4IV ACGT 3 cut(s) 326, 1457, 2960
HpyF3I CTNAG 9 cut(s) 775, 966, 1728, 2112, 2243, 2256, 2334, 2471, 2802
HpySE526I ACGT 3 cut(s) 326, 1457, 2960
Hsp92I GRCGYC 1 cut(s) 2698
Hsp92II CATG 7 cut(s) 2011, 2288, 2399, 2432, 2516, 2657, 2968
HspAI GCGC 5 cut(s) 465, 591, 917, 2030, 2698
KasI GGCGCC 1 cut(s) 2697
KflI GGGWCCC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 2434
Kzo9I GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
Lsp1109I GCAGC 8 cut(s) 87, 743, 1033, 1709, 1904, 2321, 2482, 3010
LweI GCATC 6 cut(s) 266, 326, 1439, 1935, 2880, 3010
MaeI CTAG 2 cut(s) 771, 1743
MaeII ACGT 3 cut(s) 326, 1457, 2960
MaeIII GTNAC 8 cut(s) 86, 1133, 1354, 1440, 1876, 2041, 2070, 2806
MalI GATC 6 cut(s) 688, 724, 2084, 2326, 2436, 2706
MboI GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
MfeI CAATTG 2 cut(s) 1959, 2499
MflI RGATCY 2 cut(s) 686, 2324
MlsI TGGCCA 4 cut(s) 537, 561, 861, 1452
MluNI TGGCCA 4 cut(s) 537, 561, 861, 1452
Mly113I GGCGCC 1 cut(s) 2698
MlyI GAGTC 4 cut(s) 379, 1106, 2050, 2450
MmeI TCCRAC 3 cut(s) 735, 2352, 2572
Mox20I TGGCCA 4 cut(s) 537, 561, 861, 1452
Mph1103I ATGCAT 1 cut(s) 2831
MroXI GAANNNNTTC 1 cut(s) 2299
MscI TGGCCA 4 cut(s) 537, 561, 861, 1452
MseI TTAA 7 cut(s) 1287, 1533, 1794, 2390, 2670, 2790, 2823
MslI CAYNNNNRTG 3 cut(s) 2289, 2658, 2979
Msp20I TGGCCA 4 cut(s) 537, 561, 861, 1452
MspA1I CMGCKG 1 cut(s) 1895
MspI CCGG 3 cut(s) 620, 1070, 2080
MspR9I CCNGG 5 cut(s) 549, 1809, 2194, 2228, 2613
MunI CAATTG 2 cut(s) 1959, 2499
Mva1269I GAATGC 2 cut(s) 523, 2284
MvaI CCWGG 5 cut(s) 549, 1809, 2194, 2228, 2613
MvnI CGCG 1 cut(s) 1943
NarI GGCGCC 1 cut(s) 2698
NdeII GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
NlaIII CATG 7 cut(s) 2011, 2288, 2399, 2432, 2516, 2657, 2968
NlaIV GGNNCC 9 cut(s) 52, 53, 136, 445, 583, 1022, 2326, 2699, 2920
NmeAIII GCCGAG 1 cut(s) 2932
NmuCI GTSAC 4 cut(s) 1133, 1440, 1876, 2070
NsiI ATGCAT 1 cut(s) 2831
NspI RCATGY 1 cut(s) 2011
OliI CACNNNNGTG 1 cut(s) 2979
PaeI GCATGC 1 cut(s) 2011
PaqCI CACCTGC 1 cut(s) 1435
PasI CCCWGGG 1 cut(s) 2193
PcsI WCGNNNNNNNCGW 1 cut(s) 1940
PctI GAATGC 2 cut(s) 523, 2284
PdmI GAANNNNTTC 1 cut(s) 2299
PfeI GAWTC 3 cut(s) 1240, 1600, 2577
PflMI CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2587
PleI GAGTC 4 cut(s) 378, 1105, 2050, 2450
PluTI GGCGCC 1 cut(s) 2701
PpsI GAGTC 4 cut(s) 378, 1105, 2050, 2450
PpuMI RGGWCCY 1 cut(s) 51
PshAI GACNNNNGTC 2 cut(s) 1870, 2068
Psp5II RGGWCCY 1 cut(s) 51
Psp6I CCWGG 5 cut(s) 547, 1807, 2192, 2226, 2611
PspFI CCCAGC 5 cut(s) 105, 499, 754, 1507, 1803
PspGI CCWGG 5 cut(s) 547, 1807, 2192, 2226, 2611
PspN4I GGNNCC 9 cut(s) 52, 53, 136, 445, 583, 1022, 2326, 2699, 2920
PspPI GGNCC 5 cut(s) 51, 582, 1021, 1181, 2864
PspPPI RGGWCCY 1 cut(s) 51
PsrI GAACNNNNNNTAC 2 cut(s) 1206, 1238
PstI CTGCAG 1 cut(s) 1894
PstNI CAGNNNCTG 3 cut(s) 689, 1703, 1913
PsuI RGATCY 2 cut(s) 686, 2324
PvuII CAGCTG 1 cut(s) 1895
RseI CAYNNNNRTG 3 cut(s) 2289, 2658, 2979
SalI GTCGAC 1 cut(s) 2969
SaqAI TTAA 7 cut(s) 1287, 1533, 1794, 2390, 2670, 2790, 2823
Sau3AI GATC 6 cut(s) 686, 722, 2082, 2324, 2434, 2704
Sau96I GGNCC 5 cut(s) 51, 582, 1021, 1181, 2864
ScaI AGTACT 4 cut(s) 616, 640, 1234, 1636
SchI GAGTC 4 cut(s) 379, 1106, 2050, 2450
ScrFI CCNGG 5 cut(s) 549, 1809, 2194, 2228, 2613
SfaNI GCATC 6 cut(s) 266, 326, 1439, 1935, 2880, 3010
SfcI CTRYAG 2 cut(s) 453, 1890
SfoI GGCGCC 1 cut(s) 2699
SinI GGWCC 3 cut(s) 51, 1181, 2864
SmiI ATTTAAAT 1 cut(s) 2391
SmiMI CAYNNNNRTG 3 cut(s) 2289, 2658, 2979
SmlI CTYRAG 3 cut(s) 1692, 1881, 2708
SmoI CTYRAG 3 cut(s) 1692, 1881, 2708
SphI GCATGC 1 cut(s) 2011
SsiI CCGC 7 cut(s) 348, 896, 1199, 1941, 1949, 2018, 2591
SspDI GGCGCC 1 cut(s) 2697
SspMI CTAG 2 cut(s) 771, 1743
StyD4I CCNGG 5 cut(s) 547, 1807, 2192, 2226, 2611
StyI CCWWGG 2 cut(s) 562, 2169
SwaI ATTTAAAT 1 cut(s) 2391
TaaI ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2753
TaiI ACGT 3 cut(s) 329, 1460, 2963
TaqI TCGA 3 cut(s) 368, 2062, 2970
TatI WGTACW 8 cut(s) 608, 614, 638, 1232, 1634, 1897, 2425, 2985
TauI GCSGC 3 cut(s) 899, 1951, 2594
TfiI GAWTC 3 cut(s) 1240, 1600, 2577
Tru1I TTAA 7 cut(s) 1287, 1533, 1794, 2390, 2670, 2790, 2823
Tru9I TTAA 7 cut(s) 1287, 1533, 1794, 2390, 2670, 2790, 2823
TscAI CASTG 4 cut(s) 1000, 2240, 2277, 2986
TseFI GTSAC 4 cut(s) 1133, 1440, 1876, 2070
TseI GCWGC 8 cut(s) 75, 731, 1046, 1697, 1892, 2309, 2495, 3023
Tsp45I GTSAC 4 cut(s) 1133, 1440, 1876, 2070
TspDTI ATGAA 9 cut(s) 204, 891, 1350, 1389, 1485, 1647, 2163, 2953, 3015
TspRI CASTG 4 cut(s) 1000, 2240, 2277, 2986
Van91I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2587
VneI GTGCAC 1 cut(s) 279
VpaK11BI GGWCC 3 cut(s) 51, 1181, 2864
XagI CCTNNNNNAGG 1 cut(s) 939
XapI RAATTY 2 cut(s) 1998, 2298
XceI RCATGY 1 cut(s) 2011
XcmI CCANNNNNNNNNTGG 3 cut(s) 62, 545, 1678
XmiI GTMKAC 3 cut(s) 2462, 2855, 2970
XmnI GAANNNNTTC 1 cut(s) 2299
XspI CTAG 2 cut(s) 771, 1743
ZrmI AGTACT 4 cut(s) 616, 640, 1234, 1636
Zsp2I ATGCAT 1 cut(s) 2831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.