Prupe.5G135900_v2.0.a1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0007827
Physical Location & Seq
Forward (+)
12879535 .. 12885633
6099 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G135900.2

Sequence Viewer

Length: 3129 bp
ATGTTTGGTTCAGTTGACATTCTTGAGCAATCATATAGAAGCCCATTTATGTCCCAGTCAGTTTCTAGGCAGACCCGCAATACTAGTAACGATCCTTCTGCTCCCCAGATCTTTGGTAGCACAACCCCATTTGGTCCACAAACAGGGAGTCCCATATTTGGGGTCACTTCGAATGGTGTATCTGCTGCAGCCCAATCTTCTACACCCTTTCCTTCCTCCATGACATTTGGTGCCTCATTCTCAACAGATTTTGGAAATACAATGTCTACTTTTGGAGCATCTTCTACTCCTGCTTTCAGCAGTTCATCGTTGCCCTCAATTGTTGGTTTCTGGTTGTTTGTTCCCTTTGGTTCAACATGCACCCCAGCCTTTGGTTCTGCCAGCATGCCAGCTTTTGGTGCTACAAGCATCCCGGCCTTTGGTGGTACAAGCCCTTTCGGAAGCACAACTCAACCATCACATCCAGCATTTGGGAGCAGTATATTTGGTTCTTCCACGCCATTTGGTGGATCAAGTCAGCCATCCTTTGGTGCTACAAGTAGCGCAGGGCTTCGTTCCACAACAAGTCCTCCGTTTAGAAGCACAGAAACTGCCACTGGGGTTTCAAGTTCCCCCGGAATTGGACCTGCGCTAGGATTTTATATTTCAATTACCCCAGCTTCTGGTTCGTCTAGCTCCACTTTTGGTACTTCAAGCAATCCTACTTCTGCTGCTTCAAGTACCCCTGGATTTACGTGTGGAAGCACAGAAGCTGCCACTGGAGTTTCAAGTTTCCCCTTGGTTGGATCTGGGCATGGATTTTATGTTTCAAGTACCCCAGCTTCTTGTTCCTCTTGCTCCCTTTTTCGCACTTCAAGCAATCCTACTTCTGCTGCTTCAAATACCCCTGGATTTACATGTGGATGCGCAGCTGCCACTGGGGTTTCAAGTTTCCCCTCAGTTGGATTTCGGCATGGATTGTATGTTTCAAGTACCGCAGCTTCTGGTTCCTCTAGCTCCACTTTTGGTACTTCAAGCAATCCTACTTCTGCTGTTTCAATTACCCCTGGATTTGGAAGCACAACTCAACCATCACATCCAACGTTTAGGAGCAGTATATTTGGTTCTTCTACACCATTTGGTGGATCAAGTCAGCCACCCTTTGGTGCTACAAGTAGTGCAGCGCTTCGTTCCACGACAAGTGCTCTGTTCAGAAGCACAGAAGCTGCCACTGGGGTTTCAAGTTCCCCCTTAATTGGACCTGCGCTAGGATTTTATATTTCAATTACCCCAGCTTCTGGTTTGTCTAGCTCCACTTTTGGTACTTCAAGCAATCCTACTTCTGCTGCATCAAGTACCCCTGGATTTACATGTGGAAGCATAGAAGCTGCCACTGGGGTTTCAAGTTTCCCCTCGGTTGGATCTGGGCATGGATTTTATGTTTCAAGTACCCCAGCTTCTTGTTCCTCTTGCTCCTTTTTTCGCACTTCAAGCAATCCTACTTCTGCTGCTTCAAATACCCCTGGATTTACGTGTGGAAGCACAGAAGCTGCCACTGGGATTTCTAGTTTCCCCTTGGTTAGATCTGGGCATGGATTTTATGTTTCAAGTACCCCAGCTTCTGGTTCCTCTAGGTCCCCTTTTTGTACTTCAAGCAATCCTACTTCTGCTGTTTCAAATACCCCTGGATTTGGTTCTTTAAGTACTCCATCTTTCACCTTTTCATTCCTTCCTTCTTTTTGGAAATCAACTTCTACATTTCCTAGCAGCCAATTTGGTCCTTCATGTCCTTCTGGAGCGCAGAGTTCTCCATTTGGAGCTCAATCAAAAACATTTGGAAACACTGCCTTTGAGATATCAGCTTCTGGGGCCCAACTTTGGGGAAGTAGAGTTCCTCCTTACACAACAACAACTGAACCAGATGACTCTGTTGGTCTAGAAACTAAGGGAGACCTCCAGTCAATATCGGCGATGCCGATTTATGGAGACAAAACTCACGAGGAACTGAGATGGCAGGATTATCAATTGGGGGATAGAGGTGGACATGTTCCTGCTGGAGGGAGTTGTTTTCCCTTGTCGACCTCAAACATTTTGAATCCTGCACCAACATTTGCTCAAACATCTTCAAGTCTTTTTAATCCCTCAACTCCATCGAATATATTTGCTCCACAACTTCCATCCTTTAGTTTTACAGGCTCTAGGACCTCATCTATACCATTCACTTCATCAACGTTTCCTCTCTCAACTTCACCCAATCTTTTCACAACTTCGTCGTCATCTCCTTCAGTATTCAGACCAGCTTCATCTCCATCTCATTTTAGTTCATCAGACCCATCTACATTGGCATTTCCTGCTCCAGCTCCCAGAACAGATTCAACATCTAATTCTGGCCTGTTCAATTCTATATTTGGAGTTCAATCAACAACATGCGGAAACACTGCCTGTGGGATATCAGCTTCTGGGGGCCAATTTGGGGGAAGTAGAGTGGCGCCTTACACTAAAACAGCTGGACCAGATGGTGGATCATTAAGTGGGTTATACCAATCAATATGCGGGATGCGGATTTATGGAGACAAAAGTCATGAGGAACTGAGATGGCAGGATTATCAACTGGGGGATAGAGGTGGACGGGCTCTTGTTGGTGGGAACTGCTTTGGCTTGTCTACCACCCAGTCAAACGTTTTGAATCCTACTCCAGCATTTATTCAAACATCTACCTCAACTGTACCTAATATATTTGCTCCACAAATTCCAGCCTTTACTCCTACACCCTTTGGAGCCTCATTTACACCATTACCTTCAGCATCATCTTTTCCTGTACCTGGACAAATTTCATCTCCGCCTCTTTTCAGTTCATCAGTCACGCCCACATCTGTGTCTGCATTTCCTGCTCCAGCTCCAACAACTTCCCCATTTAATTCCGGCCCAATCAATCCTATATCTTCTATTGCACAAACAGGTGGTACTGCTGGACTAACTACCACTTCCTCTGGTGGGCTGTTTACAATTCCTTCTGGTCATACACATATATCCCATGAAGAGAGGTTTCCATTAGAGGAAAAAAGGAGGTTGAACATTATGATTGCAAGGTCTAATCGCAAGAAAAATGGTCAAAAGTCCCCTTGTTCTTCTGTCCTTTCGTGGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1043

Amino Acids

105.21

Weight (kDa)

8.6

Isoelectric Point (pI)

67.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 907
Acc36I ACCTGC 2 cut(s) 634, 1249
AccB1I GGYRCC 2 cut(s) 230, 2467
AccI GTMKAC 3 cut(s) 266, 2057, 2642
AciI CCGC 6 cut(s) 76, 975, 2409, 2532, 2539, 2819
AclI AACGTT 3 cut(s) 1082, 2210, 2658
AclWI GGATC 6 cut(s) 86, 517, 793, 1132, 1408, 2509
AcoI YGGCCR 1 cut(s) 3122
AcsI RAATTY 2 cut(s) 2727, 2808
AcuI CTGAAG 2 cut(s) 2247, 2763
AcyI GRCGYC 1 cut(s) 2468
AfeI AGCGCT 1 cut(s) 1164
AflIII ACRYGT 5 cut(s) 734, 896, 1349, 1511, 2023
AhdI GACNNNNNGTC 1 cut(s) 1936
AhlI ACTAGT 1 cut(s) 83
AjnI CCWGG 7 cut(s) 724, 886, 1045, 1339, 1501, 1663, 2800
AleI CACNNNNGTG 1 cut(s) 2852
AloI GAACNNNNNNTCC 2 cut(s) 1854, 1886
Alw21I GWGCWC 2 cut(s) 1186, 1801
Alw26I GTCTC 3 cut(s) 1923, 1959, 2544
AlwI GGATC 6 cut(s) 86, 517, 793, 1132, 1408, 2509
Aor51HI AGCGCT 1 cut(s) 1164
AoxI GGCC 6 cut(s) 414, 1848, 2368, 2443, 2902, 3122
ApaI GGGCCC 1 cut(s) 1852
ApoI RAATTY 2 cut(s) 2727, 2808
ArsI GACNNNNNNTTYG 2 cut(s) 133, 165
Asp700I GAANNNNTTC 1 cut(s) 2350
AspLEI GCGC 7 cut(s) 545, 631, 908, 1165, 1246, 1780, 2470
AsuC2I CCSGG 2 cut(s) 413, 615
AsuHPI GGTGA 2 cut(s) 1687, 2220
AsuII TTCGAA 1 cut(s) 170
AvaII GGWCC 7 cut(s) 134, 623, 1238, 1614, 1757, 2181, 2489
BaeGI GKGCMC 1 cut(s) 1852
BalI TGGCCA 1 cut(s) 3124
BanI GGYRCC 2 cut(s) 230, 2467
BanII GRGCYC 3 cut(s) 1801, 1852, 2614
BauI CACGAG 1 cut(s) 1976
Bbv12I GWGCWC 2 cut(s) 1186, 1801
BcgI CGANNNNNNTGC 2 cut(s) 80, 114
BciT130I CCWGG 7 cut(s) 726, 888, 1047, 1341, 1503, 1665, 2802
BcnI CCSGG 2 cut(s) 413, 615
BcoDI GTCTC 3 cut(s) 1923, 1959, 2544
BcuI ACTAGT 1 cut(s) 83
BfmI CTRYAG 1 cut(s) 186
BfoI RGCGCY 2 cut(s) 1166, 2471
BfuAI ACCTGC 2 cut(s) 634, 1249
BglII AGATCT 2 cut(s) 108, 1562
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 9 cut(s) 413, 615, 726, 888, 1047, 1341, 1503, 1665, 2802
Bme18I GGWCC 7 cut(s) 134, 623, 1238, 1614, 1757, 2181, 2489
BmeRI GACNNNNNGTC 1 cut(s) 1936
BmiI GGNNCC 9 cut(s) 232, 988, 1606, 1616, 1849, 1850, 2444, 2469, 2758
BmrFI CCNGG 9 cut(s) 413, 615, 726, 888, 1047, 1341, 1503, 1665, 2802
BmrI ACTGGG 8 cut(s) 49, 606, 927, 1221, 1383, 1545, 2600, 2644
BmsI GCATC 7 cut(s) 287, 417, 893, 1337, 1941, 2526, 2792
BmuI ACTGGG 8 cut(s) 49, 606, 927, 1221, 1383, 1545, 2600, 2644
BoxI GACNNNNGTC 1 cut(s) 2556
BpmI CTGGAG 7 cut(s) 780, 1794, 1919, 2055, 2319, 2658, 2856
Bpu14I TTCGAA 1 cut(s) 170
BpuEI CTTGAG 1 cut(s) 44
BpuMI CCSGG 2 cut(s) 413, 615
BsaAI YACGTR 2 cut(s) 735, 1512
BsaHI GRCGYC 1 cut(s) 2468
BsaI GGTCTC 1 cut(s) 1923
BsaXI ACNNNNNCTCC 2 cut(s) 553, 583
BseBI CCWGG 7 cut(s) 726, 888, 1047, 1341, 1503, 1665, 2802
BseGI GGATG 7 cut(s) 408, 460, 521, 908, 1075, 2156, 2541
BseMII CTCAG 3 cut(s) 951, 1976, 2561
BseSI GKGCMC 1 cut(s) 1852
BseYI CCCAGC 6 cut(s) 364, 655, 817, 1270, 1432, 1594
BsgI GTGCAG 2 cut(s) 1179, 2064
BshFI GGCC 6 cut(s) 416, 1850, 2370, 2445, 2904, 3124
BshNI GGYRCC 2 cut(s) 230, 2467
BsiHKAI GWGCWC 2 cut(s) 1186, 1801
BsiSI CCGG 3 cut(s) 413, 615, 2901
BslFI GGGAC 4 cut(s) 37, 135, 1600, 3082
BsmAI GTCTC 3 cut(s) 1923, 1959, 2544
BsmFI GGGAC 4 cut(s) 37, 135, 1600, 3082
BsnI GGCC 6 cut(s) 416, 1850, 2370, 2445, 2904, 3124
Bso31I GGTCTC 1 cut(s) 1923
Bsp119I TTCGAA 1 cut(s) 170
Bsp120I GGGCCC 1 cut(s) 1848
Bsp1286I GDGCHC 4 cut(s) 1186, 1801, 1852, 2614
Bsp143I GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
BspACI CCGC 6 cut(s) 76, 975, 2409, 2532, 2539, 2819
BspANI GGCC 6 cut(s) 416, 1850, 2370, 2445, 2904, 3124
BspCNI CTCAG 3 cut(s) 950, 1977, 2562
BspHI TCATGA 1 cut(s) 2560
BspLI GGNNCC 9 cut(s) 232, 988, 1606, 1616, 1849, 1850, 2444, 2469, 2758
BspMAI CTGCAG 1 cut(s) 190
BspMI ACCTGC 2 cut(s) 634, 1249
BspPI GGATC 6 cut(s) 86, 517, 793, 1132, 1408, 2509
BspT104I TTCGAA 1 cut(s) 170
BspT107I GGYRCC 2 cut(s) 230, 2467
BspTNI GGTCTC 1 cut(s) 1923
BssMI GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
BssNI GRCGYC 1 cut(s) 2468
BssSI CACGAG 1 cut(s) 1976
BssT1I CCWWGG 2 cut(s) 777, 1554
Bst2BI CACGAG 1 cut(s) 1976
Bst2UI CCWGG 7 cut(s) 726, 888, 1047, 1341, 1503, 1665, 2802
Bst4CI ACNGT 1 cut(s) 2704
Bst6I CTCTTC 1 cut(s) 3012
BstACI GRCGYC 1 cut(s) 2468
BstAPI GCANNNNNTGC 2 cut(s) 2330, 2867
BstBAI YACGTR 2 cut(s) 735, 1512
BstBI TTCGAA 1 cut(s) 170
BstC8I GCNNGC 3 cut(s) 382, 386, 390
BstDEI CTNAG 4 cut(s) 937, 1923, 1985, 2570
BstENI CCTNNNNNAGG 3 cut(s) 630, 1245, 2034
BstF5I GGATG 7 cut(s) 408, 460, 521, 908, 1075, 2156, 2541
BstH2I RGCGCY 2 cut(s) 1166, 2471
BstHHI GCGC 7 cut(s) 545, 631, 908, 1165, 1246, 1780, 2470
BstKTI GATC 8 cut(s) 94, 111, 512, 788, 1127, 1403, 1565, 2504
BstMAI GTCTC 3 cut(s) 1923, 1959, 2544
BstMBI GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
BstMWI GCNNNNNNNGC 6 cut(s) 398, 855, 1470, 1847, 2330, 2867
BstNI CCWGG 7 cut(s) 726, 888, 1047, 1341, 1503, 1665, 2802
BstNSI RCATGY 6 cut(s) 360, 388, 900, 1353, 2027, 2409
BstPAI GACNNNNGTC 1 cut(s) 2556
BstSCI CCNGG 9 cut(s) 411, 613, 724, 886, 1045, 1339, 1501, 1663, 2800
BstSFI CTRYAG 1 cut(s) 186
BstSLI GKGCMC 1 cut(s) 1852
BstX2I RGATCY 4 cut(s) 108, 785, 1400, 1562
BstXI CCANNNNNNTGG 1 cut(s) 113
BstYI RGATCY 4 cut(s) 108, 785, 1400, 1562
BsuRI GGCC 6 cut(s) 416, 1850, 2370, 2445, 2904, 3124
BtgZI GCGATG 1 cut(s) 1964
BtsCI GGATG 7 cut(s) 408, 460, 521, 908, 1075, 2156, 2541
BtsI GCAGTG 2 cut(s) 1821, 2415
BtsIMutI CAGTG 8 cut(s) 594, 756, 915, 1209, 1371, 1533, 1821, 2415
BveI ACCTGC 2 cut(s) 634, 1249
Cac8I GCNNGC 3 cut(s) 382, 386, 390
CciI TCATGA 1 cut(s) 2560
CfoI GCGC 7 cut(s) 545, 631, 908, 1165, 1246, 1780, 2470
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
DdeI CTNAG 4 cut(s) 937, 1923, 1985, 2570
DinI GGCGCC 1 cut(s) 2469
DpnI GATC 8 cut(s) 93, 110, 511, 787, 1126, 1402, 1564, 2503
DpnII GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
DriI GACNNNNNGTC 1 cut(s) 1936
EaeI YGGCCR 1 cut(s) 3122
Eam1104I CTCTTC 1 cut(s) 3012
Eam1105I GACNNNNNGTC 1 cut(s) 1936
EarI CTCTTC 1 cut(s) 3012
EciI GGCGGA 1 cut(s) 2808
Ecl136II GAGCTC 1 cut(s) 1799
Eco130I CCWWGG 2 cut(s) 777, 1554
Eco24I GRGCYC 3 cut(s) 1801, 1852, 2614
Eco31I GGTCTC 1 cut(s) 1923
Eco32I GATATC 2 cut(s) 1836, 2430
Eco47I GGWCC 7 cut(s) 134, 623, 1238, 1614, 1757, 2181, 2489
Eco47III AGCGCT 1 cut(s) 1164
Eco53kI GAGCTC 1 cut(s) 1799
Eco57I CTGAAG 2 cut(s) 2247, 2763
EcoICRI GAGCTC 1 cut(s) 1799
EcoNI CCTNNNNNAGG 3 cut(s) 630, 1245, 2034
EcoO109I RGGNCCY 3 cut(s) 1614, 1848, 2181
EcoRII CCWGG 7 cut(s) 724, 886, 1045, 1339, 1501, 1663, 2800
EcoRV GATATC 2 cut(s) 1836, 2430
EcoT14I CCWWGG 2 cut(s) 777, 1554
EcoT38I GRGCYC 3 cut(s) 1801, 1852, 2614
EgeI GGCGCC 1 cut(s) 2469
EheI GGCGCC 1 cut(s) 2469
ErhI CCWWGG 2 cut(s) 777, 1554
FaqI GGGAC 4 cut(s) 37, 135, 1600, 3082
FauI CCCGC 2 cut(s) 83, 2525
FblI GTMKAC 3 cut(s) 266, 2057, 2642
FokI GGATG 7 cut(s) 395, 447, 508, 915, 1062, 2143, 2548
FriOI GRGCYC 3 cut(s) 1801, 1852, 2614
FspI TGCGCA 1 cut(s) 907
GlaI GCGC 7 cut(s) 544, 630, 907, 1164, 1245, 1779, 2469
GsaI CCCAGC 6 cut(s) 368, 659, 821, 1274, 1436, 1598
GsuI CTGGAG 7 cut(s) 780, 1794, 1919, 2055, 2319, 2658, 2856
HaeII RGCGCY 2 cut(s) 1166, 2471
HaeIII GGCC 6 cut(s) 416, 1850, 2370, 2445, 2904, 3124
HapII CCGG 3 cut(s) 413, 615, 2901
HhaI GCGC 7 cut(s) 545, 631, 908, 1165, 1246, 1780, 2470
Hin1I GRCGYC 1 cut(s) 2468
Hin6I GCGC 7 cut(s) 543, 629, 906, 1163, 1244, 1778, 2468
HinP1I GCGC 7 cut(s) 543, 629, 906, 1163, 1244, 1778, 2468
HincII GTYRAC 2 cut(s) 16, 2058
HindII GTYRAC 2 cut(s) 16, 2058
HinfI GANTC 5 cut(s) 148, 1904, 2074, 2351, 2665
HpaII CCGG 3 cut(s) 413, 615, 2901
HphI GGTGA 2 cut(s) 1687, 2220
Hpy166II GTNNAC 8 cut(s) 16, 137, 267, 2021, 2058, 2606, 2643, 2982
Hpy188I TCNGA 4 cut(s) 440, 1193, 2273, 2308
Hpy188III TCNNGA 5 cut(s) 23, 1773, 1916, 1976, 2561
Hpy8I GTNNAC 8 cut(s) 16, 137, 267, 2021, 2058, 2606, 2643, 2982
Hpy99I CGWCG 1 cut(s) 2254
HpyAV CCTTC 9 cut(s) 105, 222, 1718, 1722, 1770, 1779, 2271, 2787, 3000
HpyCH4III ACNGT 1 cut(s) 2704
HpyCH4IV ACGT 5 cut(s) 734, 1082, 1511, 2210, 2658
HpyCH4V TGCA 8 cut(s) 188, 360, 1160, 1328, 2081, 2861, 2930, 3065
HpyF10VI GCNNNNNNNGC 6 cut(s) 398, 855, 1470, 1847, 2330, 2867
HpyF3I CTNAG 4 cut(s) 937, 1923, 1985, 2570
HpySE526I ACGT 5 cut(s) 734, 1082, 1511, 2210, 2658
Hsp92I GRCGYC 1 cut(s) 2468
HspAI GCGC 7 cut(s) 543, 629, 906, 1163, 1244, 1778, 2468
KasI GGCGCC 1 cut(s) 2467
Kzo9I GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
LweI GCATC 7 cut(s) 287, 417, 893, 1337, 1941, 2526, 2792
MaeII ACGT 5 cut(s) 734, 1082, 1511, 2210, 2658
MaeIII GTNAC 3 cut(s) 86, 163, 2839
MalI GATC 8 cut(s) 93, 110, 511, 787, 1126, 1402, 1564, 2503
MboI GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
MboII GAAGA 8 cut(s) 189, 273, 483, 1098, 2094, 2913, 3029, 3099
MfeI CAATTG 2 cut(s) 318, 2003
MflI RGATCY 4 cut(s) 108, 785, 1400, 1562
MhlI GDGCHC 4 cut(s) 1186, 1801, 1852, 2614
MlsI TGGCCA 1 cut(s) 3124
MluNI TGGCCA 1 cut(s) 3124
Mly113I GGCGCC 1 cut(s) 2468
MlyI GAGTC 2 cut(s) 157, 1898
MmeI TCCRAC 5 cut(s) 763, 922, 1103, 1378, 2903
Mox20I TGGCCA 1 cut(s) 3124
MroXI GAANNNNTTC 1 cut(s) 2350
MscI TGGCCA 1 cut(s) 3124
MseI TTAA 5 cut(s) 1232, 1679, 2115, 2507, 2895
MslI CAYNNNNRTG 2 cut(s) 901, 2852
Msp20I TGGCCA 1 cut(s) 3124
MspA1I CMGCKG 2 cut(s) 911, 2486
MspI CCGG 3 cut(s) 413, 615, 2901
MspR9I CCNGG 9 cut(s) 413, 615, 726, 888, 1047, 1341, 1503, 1665, 2802
MunI CAATTG 2 cut(s) 318, 2003
MvaI CCWGG 7 cut(s) 726, 888, 1047, 1341, 1503, 1665, 2802
MwoI GCNNNNNNNGC 6 cut(s) 398, 855, 1470, 1847, 2330, 2867
NarI GGCGCC 1 cut(s) 2468
NciI CCSGG 2 cut(s) 413, 615
NdeII GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
NlaIV GGNNCC 9 cut(s) 232, 988, 1606, 1616, 1849, 1850, 2444, 2469, 2758
NmuCI GTSAC 2 cut(s) 163, 2839
NsbI TGCGCA 1 cut(s) 907
NspI RCATGY 6 cut(s) 360, 388, 900, 1353, 2027, 2409
NspV TTCGAA 1 cut(s) 170
OliI CACNNNNGTG 1 cut(s) 2852
PaeI GCATGC 1 cut(s) 388
PagI TCATGA 1 cut(s) 2560
PciI ACATGT 3 cut(s) 896, 1349, 2023
PcsI WCGNNNNNNNCGW 1 cut(s) 1952
PdmI GAANNNNTTC 1 cut(s) 2350
PfeI GAWTC 3 cut(s) 2074, 2351, 2665
PleI GAGTC 2 cut(s) 156, 1898
PluTI GGCGCC 1 cut(s) 2471
PpsI GAGTC 2 cut(s) 156, 1898
Ppu21I YACGTR 2 cut(s) 735, 1512
PpuMI RGGWCCY 2 cut(s) 1614, 2181
PscI ACATGT 3 cut(s) 896, 1349, 2023
PshAI GACNNNNGTC 1 cut(s) 2556
Psp124BI GAGCTC 1 cut(s) 1801
Psp1406I AACGTT 3 cut(s) 1082, 2210, 2658
Psp5II RGGWCCY 2 cut(s) 1614, 2181
Psp6I CCWGG 7 cut(s) 724, 886, 1045, 1339, 1501, 1663, 2800
PspFI CCCAGC 6 cut(s) 364, 655, 817, 1270, 1432, 1594
PspGI CCWGG 7 cut(s) 724, 886, 1045, 1339, 1501, 1663, 2800
PspN4I GGNNCC 9 cut(s) 232, 988, 1606, 1616, 1849, 1850, 2444, 2469, 2758
PspOMI GGGCCC 1 cut(s) 1848
PspPPI RGGWCCY 2 cut(s) 1614, 2181
PsrI GAACNNNNNNTAC 4 cut(s) 472, 504, 1087, 1119
PstI CTGCAG 1 cut(s) 190
PsuI RGATCY 4 cut(s) 108, 785, 1400, 1562
PvuII CAGCTG 2 cut(s) 911, 2486
RseI CAYNNNNRTG 2 cut(s) 901, 2852
SacI GAGCTC 1 cut(s) 1801
SalI GTCGAC 1 cut(s) 2056
SaqAI TTAA 5 cut(s) 1232, 1679, 2115, 2507, 2895
Sau3AI GATC 8 cut(s) 91, 108, 509, 785, 1124, 1400, 1562, 2501
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 2 cut(s) 157, 1898
ScrFI CCNGG 9 cut(s) 413, 615, 726, 888, 1047, 1341, 1503, 1665, 2802
SduI GDGCHC 4 cut(s) 1186, 1801, 1852, 2614
SfaNI GCATC 7 cut(s) 287, 417, 893, 1337, 1941, 2526, 2792
SfcI CTRYAG 1 cut(s) 186
SfoI GGCGCC 1 cut(s) 2469
SfuI TTCGAA 1 cut(s) 170
SinI GGWCC 7 cut(s) 134, 623, 1238, 1614, 1757, 2181, 2489
SmiMI CAYNNNNRTG 2 cut(s) 901, 2852
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
SpeI ACTAGT 1 cut(s) 83
SphI GCATGC 1 cut(s) 388
SsiI CCGC 6 cut(s) 76, 975, 2409, 2532, 2539, 2819
SspDI GGCGCC 1 cut(s) 2467
SstI GAGCTC 1 cut(s) 1801
StyD4I CCNGG 9 cut(s) 411, 613, 724, 886, 1045, 1339, 1501, 1663, 2800
StyI CCWWGG 2 cut(s) 777, 1554
TaaI ACNGT 1 cut(s) 2704
TaiI ACGT 5 cut(s) 737, 1085, 1514, 2213, 2661
TaqI TCGA 3 cut(s) 170, 2057, 2132
TatI WGTACW 2 cut(s) 1625, 1682
TfiI GAWTC 3 cut(s) 2074, 2351, 2665
Tru1I TTAA 5 cut(s) 1232, 1679, 2115, 2507, 2895
Tru9I TTAA 5 cut(s) 1232, 1679, 2115, 2507, 2895
TscAI CASTG 8 cut(s) 601, 763, 922, 1216, 1378, 1540, 1828, 2422
TseFI GTSAC 2 cut(s) 163, 2839
Tsp45I GTSAC 2 cut(s) 163, 2839
TspDTI ATGAA 9 cut(s) 294, 1692, 1752, 2193, 2271, 2292, 2802, 2823, 3030
TspGWI ACGGA 1 cut(s) 561
TspRI CASTG 8 cut(s) 601, 763, 922, 1216, 1378, 1540, 1828, 2422
VpaK11BI GGWCC 7 cut(s) 134, 623, 1238, 1614, 1757, 2181, 2489
XagI CCTNNNNNAGG 3 cut(s) 630, 1245, 2034
XapI RAATTY 2 cut(s) 2727, 2808
XbaI TCTAGA 1 cut(s) 1915
XceI RCATGY 6 cut(s) 360, 388, 900, 1353, 2027, 2409
XmiI GTMKAC 3 cut(s) 266, 2057, 2642
XmnI GAANNNNTTC 1 cut(s) 2350
ZrmI AGTACT 1 cut(s) 1684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.